YGEH - ECOLI - GREMLIN Contacts

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YGEH - Uncharacterized protein YgeH

UniProt:	P76639	Sequences: MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13038
Length:	458 (396)
Sequences:	1974 (1716)
Seq/√Len:	86.2

ECOLI - YGEH CADC

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
353_Q	356_V	6.482	1.00
422_P	425_N	6.404	1.00
387_K	390_E	6.057	1.00
379_A	395_I	4.770	1.00
319_A	322_K	4.127	1.00
42_V	56_I	3.964	1.00
345_G	361_F	3.832	1.00
159_A	162_N	3.584	1.00
262_G	281_F	3.550	1.00
158_M	161_T	3.349	1.00
46_S	49_H	3.267	1.00
413_E	430_Y	3.234	1.00
273_S	276_R	3.190	1.00
341_L	360_L	2.985	1.00
402_E	406_R	2.697	1.00
158_M	162_N	2.502	1.00
47_A	51_V	2.442	1.00
44_L	101_F	2.429	1.00
403_P	406_R	2.363	1.00
302_A	327_L	2.236	1.00
200_L	210_A	2.219	1.00
256_S	260_L	2.185	1.00
39_V	60_V	2.185	1.00
402_E	405_R	2.183	1.00
159_A	164_C	2.171	1.00
197_Y	200_L	2.169	1.00
181_Y	186_R	2.164	1.00
46_S	55_M	2.148	1.00
417_M	422_P	2.117	1.00
278_M	282_D	2.096	1.00
36_E	74_C	2.093	1.00
69_E	72_T	2.088	1.00
281_F	300_L	2.072	1.00
381_V	385_N	2.032	1.00
22_I	29_Q	2.017	1.00
207_F	210_A	2.009	1.00
21_G	38_G	2.008	1.00
392_R	420_P	1.947	1.00
70_S	73_R	1.921	1.00
291_Q	294_K	1.884	1.00
158_M	163_F	1.875	1.00
358_H	362_E	1.867	1.00
358_H	381_V	1.861	1.00
200_L	204_K	1.858	1.00
258_E	280_I	1.850	1.00
74_C	77_S	1.841	1.00
328_D	344_M	1.830	1.00
362_E	378_R	1.821	1.00
382_H	387_K	1.816	1.00
218_E	222_T	1.814	1.00
161_T	164_C	1.805	1.00
70_S	74_C	1.793	1.00
278_M	304_C	1.781	1.00
42_V	46_S	1.762	1.00
25_Q	28_E	1.759	1.00
33_P	74_C	1.736	1.00
375_Y	394_C	1.720	1.00
278_M	301_L	1.714	1.00
358_H	385_N	1.714	1.00
158_M	164_C	1.713	1.00
298_Y	326_L	1.708	1.00
182_F	186_R	1.702	1.00
204_K	207_F	1.687	1.00
73_R	77_S	1.682	1.00
382_H	394_C	1.682	1.00
417_M	425_N	1.677	1.00
177_F	181_Y	1.673	1.00
348_T	356_V	1.663	1.00
215_P	218_E	1.657	1.00
348_T	353_Q	1.645	1.00
282_D	301_L	1.637	1.00
396_D	412_K	1.631	1.00
201_I	205_N	1.615	1.00
375_Y	397_K	1.595	1.00
42_V	60_V	1.580	1.00
237_P	245_K	1.560	1.00
229_N	233_T	1.550	1.00
355_K	385_N	1.546	1.00
242_R	245_K	1.542	1.00
117_D	125_F	1.531	1.00
56_I	71_L	1.526	1.00
181_Y	185_G	1.510	1.00
36_E	77_S	1.506	1.00
181_Y	187_I	1.505	1.00
392_R	412_K	1.495	0.99
92_E	100_R	1.480	0.99
278_M	308_L	1.474	0.99
62_K	70_S	1.469	0.99
37_L	41_I	1.465	0.99
178_K	181_Y	1.463	0.99
33_P	73_R	1.463	0.99
413_E	433_E	1.455	0.99
204_K	210_A	1.445	0.99
191_N	200_L	1.438	0.99
53_K	68_D	1.423	0.99
45_E	59_S	1.414	0.99
361_F	377_Y	1.407	0.99
283_R	286_N	1.401	0.99
290_I	293_L	1.387	0.99
120_I	125_F	1.359	0.99
358_H	378_R	1.354	0.99
44_L	47_A	1.349	0.99
358_H	382_H	1.344	0.99
219_L	222_T	1.343	0.99
229_N	234_V	1.317	0.99
418_Y	423_L	1.305	0.99
205_N	208_L	1.300	0.99
280_I	284_L	1.298	0.99
193_V	200_L	1.295	0.99
200_L	203_A	1.292	0.99
342_A	377_Y	1.287	0.98
159_A	163_F	1.283	0.98
347_I	351_S	1.277	0.98
76_Y	80_C	1.266	0.98
146_S	155_T	1.265	0.98
412_K	417_M	1.264	0.98
78_L	91_I	1.264	0.98
193_V	197_Y	1.255	0.98
196_L	200_L	1.247	0.98
42_V	59_S	1.244	0.98
69_E	73_R	1.241	0.98
417_M	429_L	1.240	0.98
418_Y	427_I	1.240	0.98
261_A	264_K	1.236	0.98
37_L	66_V	1.235	0.98
60_V	70_S	1.231	0.98
44_L	103_G	1.225	0.98
174_L	177_F	1.220	0.98
378_R	382_H	1.219	0.98
324_L	328_D	1.209	0.98
354_A	381_V	1.209	0.98
21_G	37_L	1.209	0.98
393_I	397_K	1.206	0.98
37_L	60_V	1.194	0.97
123_F	126_T	1.194	0.97
298_Y	329_Y	1.189	0.97
57_I	68_D	1.188	0.97
382_H	385_N	1.185	0.97
118_Y	121_A	1.183	0.97
220_H	223_S	1.172	0.97
362_E	390_E	1.170	0.97
138_N	142_V	1.166	0.97
257_D	264_K	1.158	0.97
329_Y	333_I	1.147	0.97
415_V	420_P	1.137	0.97
158_M	165_N	1.137	0.97
209_I	213_H	1.130	0.96
40_L	78_L	1.128	0.96
232_Q	236_K	1.126	0.96
120_I	123_F	1.122	0.96
254_Y	258_E	1.118	0.96
348_T	360_L	1.118	0.96
84_K	88_D	1.117	0.96
423_L	427_I	1.117	0.96
218_E	223_S	1.112	0.96
201_I	204_K	1.109	0.96
52_L	55_M	1.098	0.96
90_C	103_G	1.094	0.96
116_S	125_F	1.092	0.96
101_F	105_V	1.091	0.96
43_L	51_V	1.091	0.96
33_P	77_S	1.084	0.96
301_L	305_H	1.084	0.96
41_I	45_E	1.082	0.96
358_H	387_K	1.070	0.95
72_T	76_Y	1.064	0.95
77_S	97_K	1.062	0.95
53_K	72_T	1.061	0.95
259_M	294_K	1.060	0.95
33_P	60_V	1.059	0.95
262_G	266_L	1.058	0.95
363_Q	366_I	1.058	0.95
205_N	210_A	1.057	0.95
390_E	393_I	1.055	0.95
50_V	98_G	1.050	0.95
344_M	360_L	1.049	0.95
392_R	415_V	1.044	0.95
72_T	75_I	1.038	0.94
197_Y	204_K	1.035	0.94
231_L	235_H	1.034	0.94
216_V	219_L	1.028	0.94
395_I	411_I	1.026	0.94
223_S	233_T	1.022	0.94
35_K	60_V	1.020	0.94
34_Q	70_S	1.020	0.94
225_F	229_N	1.018	0.94
118_Y	125_F	1.018	0.94
58_E	63_N	1.015	0.94
121_A	124_P	1.014	0.94
176_R	181_Y	1.007	0.93
395_I	415_V	1.006	0.93
67_S	74_C	1.003	0.93
218_E	224_Q	0.999	0.93
70_S	77_S	0.999	0.93
203_A	210_A	0.998	0.93
33_P	36_E	0.997	0.93
304_C	307_S	0.993	0.93
39_V	51_V	0.992	0.93
46_S	59_S	0.982	0.93
365_K	374_L	0.982	0.93
257_D	261_A	0.980	0.92
379_A	411_I	0.978	0.92
417_M	420_P	0.977	0.92
202_D	205_N	0.977	0.92
92_E	102_S	0.977	0.92
50_V	97_K	0.975	0.92
35_K	71_L	0.975	0.92
75_I	99_Y	0.975	0.92
285_Q	298_Y	0.968	0.92
231_L	234_V	0.965	0.92
389_E	420_P	0.965	0.92
134_P	138_N	0.963	0.92
329_Y	332_D	0.961	0.92
207_F	211_S	0.959	0.92
324_L	351_S	0.959	0.92
392_R	396_D	0.956	0.92
414_C	419_V	0.953	0.91
78_L	82_F	0.953	0.91
282_D	322_K	0.946	0.91
383_F	395_I	0.943	0.91
72_T	101_F	0.940	0.91
412_K	415_V	0.938	0.91
177_F	186_R	0.937	0.91
220_H	224_Q	0.933	0.91
327_L	347_I	0.932	0.90
53_K	62_K	0.929	0.90
382_H	390_E	0.923	0.90
219_L	223_S	0.916	0.90
361_F	378_R	0.915	0.90
129_L	132_L	0.907	0.89
354_A	358_H	0.899	0.89
210_A	214_L	0.895	0.89
21_G	74_C	0.894	0.89
330_V	333_I	0.891	0.88
255_L	262_G	0.890	0.88
218_E	226_I	0.890	0.88
294_K	297_C	0.888	0.88
345_G	377_Y	0.886	0.88
153_L	157_P	0.884	0.88
57_I	65_I	0.879	0.88
346_L	350_L	0.878	0.88
104_Q	107_K	0.878	0.88
21_G	33_P	0.877	0.88
172_S	176_R	0.876	0.88
53_K	93_T	0.876	0.88
163_F	176_R	0.868	0.87
338_G	364_A	0.868	0.87
262_G	267_Y	0.868	0.87
141_L	148_K	0.867	0.87
305_H	326_L	0.865	0.87
66_V	97_K	0.864	0.87
260_L	264_K	0.863	0.87
84_K	90_C	0.862	0.87
222_T	226_I	0.858	0.86
216_V	220_H	0.858	0.86
375_Y	401_L	0.854	0.86
364_A	374_L	0.853	0.86
178_K	182_F	0.852	0.86
223_S	229_N	0.851	0.86
344_M	348_T	0.849	0.86
406_R	413_E	0.848	0.86
200_L	211_S	0.847	0.86
304_C	308_L	0.845	0.86
120_I	124_P	0.844	0.86
296_E	300_L	0.844	0.86
24_T	78_L	0.842	0.85
205_N	212_N	0.841	0.85
36_E	39_V	0.836	0.85
57_I	62_K	0.835	0.85
217_D	220_H	0.826	0.84
118_Y	123_F	0.826	0.84
219_L	224_Q	0.824	0.84
152_G	156_Y	0.820	0.84
409_V	417_M	0.810	0.83
57_I	70_S	0.809	0.83
32_I	81_I	0.806	0.83
35_K	74_C	0.803	0.83
241_V	245_K	0.800	0.82
41_I	60_V	0.798	0.82
257_D	262_G	0.795	0.82
341_L	345_G	0.793	0.82
79_R	99_Y	0.791	0.82
24_T	29_Q	0.791	0.82
322_K	326_L	0.790	0.82
220_H	234_V	0.790	0.82
52_L	97_K	0.787	0.81
193_V	196_L	0.786	0.81
392_R	417_M	0.785	0.81
224_Q	229_N	0.785	0.81
395_I	408_A	0.782	0.81
328_D	356_V	0.781	0.81
305_H	322_K	0.778	0.81
35_K	73_R	0.777	0.80
196_L	202_D	0.777	0.80
357_S	381_V	0.775	0.80
389_E	422_P	0.774	0.80
164_C	168_I	0.774	0.80
84_K	89_R	0.773	0.80
220_H	227_I	0.771	0.80
224_Q	233_T	0.771	0.80
33_P	67_S	0.771	0.80
327_L	343_I	0.770	0.80
69_E	74_C	0.769	0.80
383_F	415_V	0.768	0.80
140_E	153_L	0.767	0.80
222_T	234_V	0.767	0.80
356_V	359_I	0.759	0.79
418_Y	422_P	0.758	0.79
161_T	165_N	0.757	0.79
250_Y	253_H	0.756	0.79
297_C	304_C	0.754	0.78
210_A	213_H	0.754	0.78
323_A	347_I	0.753	0.78
205_N	211_S	0.753	0.78
35_K	38_G	0.750	0.78
32_I	36_E	0.748	0.78
388_I	392_R	0.747	0.78
338_G	345_G	0.745	0.78
345_G	360_L	0.744	0.78
410_V	430_Y	0.744	0.78
375_Y	382_H	0.744	0.78
237_P	241_V	0.741	0.77
178_K	186_R	0.740	0.77
254_Y	283_R	0.739	0.77
97_K	100_R	0.737	0.77
226_I	235_H	0.732	0.76
116_S	122_I	0.731	0.76
95_Y	99_Y	0.730	0.76
37_L	96_R	0.729	0.76
249_G	253_H	0.727	0.76
60_V	73_R	0.727	0.76
346_L	376_Y	0.726	0.76
238_E	242_R	0.723	0.75
50_V	102_S	0.722	0.75
19_E	24_T	0.722	0.75
33_P	38_G	0.722	0.75
414_C	418_Y	0.720	0.75
205_N	209_I	0.718	0.75
73_R	76_Y	0.718	0.75
72_T	100_R	0.716	0.75
174_L	178_K	0.714	0.75
90_C	101_F	0.712	0.74
321_Q	351_S	0.712	0.74
320_A	347_I	0.709	0.74
140_E	156_Y	0.707	0.74
341_L	344_M	0.707	0.74
146_S	158_M	0.707	0.74
223_S	231_L	0.707	0.74
197_Y	201_I	0.707	0.74
64_I	70_S	0.706	0.74
257_D	260_L	0.704	0.74
73_R	100_R	0.704	0.74
117_D	120_I	0.702	0.73
22_I	70_S	0.701	0.73
230_I	234_V	0.699	0.73
78_L	86_G	0.699	0.73
21_G	96_R	0.697	0.73
262_G	277_A	0.696	0.73
383_F	388_I	0.696	0.73
35_K	70_S	0.695	0.73
290_I	294_K	0.695	0.73
88_D	102_S	0.694	0.72
219_L	234_V	0.692	0.72
86_G	90_C	0.692	0.72
362_E	366_I	0.690	0.72
230_I	233_T	0.689	0.72
93_T	96_R	0.689	0.72
159_A	177_F	0.689	0.72
266_L	281_F	0.687	0.72
396_D	425_N	0.685	0.71
35_K	69_E	0.684	0.71
77_S	80_C	0.682	0.71
331_S	341_L	0.682	0.71
33_P	69_E	0.681	0.71
48_G	99_Y	0.680	0.71
246_Q	250_Y	0.680	0.71
183_V	186_R	0.679	0.71
69_E	75_I	0.678	0.71
19_E	41_I	0.676	0.70
125_F	185_G	0.674	0.70
177_F	187_I	0.674	0.70
118_Y	124_P	0.673	0.70
232_Q	235_H	0.673	0.70
259_M	264_K	0.672	0.70
366_I	370_D	0.667	0.69
144_I	155_T	0.666	0.69
25_Q	84_K	0.665	0.69
195_T	220_H	0.663	0.69
21_G	72_T	0.663	0.69
117_D	122_I	0.663	0.69
365_K	371_I	0.663	0.69
281_F	301_L	0.663	0.69
222_T	233_T	0.663	0.69
204_K	208_L	0.662	0.69
419_V	423_L	0.662	0.69
144_I	157_P	0.661	0.69
324_L	327_L	0.660	0.69
72_T	93_T	0.657	0.68
239_R	242_R	0.656	0.68
127_T	130_N	0.653	0.68
218_E	230_I	0.652	0.68
20_D	109_K	0.649	0.67
78_L	95_Y	0.649	0.67
403_P	407_K	0.648	0.67
223_S	226_I	0.643	0.67
324_L	348_T	0.642	0.67
73_R	78_L	0.639	0.66
36_E	70_S	0.637	0.66
67_S	70_S	0.636	0.66
246_Q	249_G	0.634	0.66
327_L	333_I	0.633	0.65
77_S	96_R	0.632	0.65
349_G	382_H	0.631	0.65
200_L	214_L	0.630	0.65
215_P	220_H	0.629	0.65
19_E	22_I	0.626	0.65
55_M	59_S	0.624	0.64
144_I	156_Y	0.622	0.64
388_I	415_V	0.621	0.64
78_L	99_Y	0.619	0.64
117_D	123_F	0.619	0.64
397_K	400_Q	0.619	0.64
305_H	319_A	0.618	0.64
195_T	206_L	0.617	0.63
35_K	77_S	0.617	0.63
409_V	429_L	0.617	0.63
209_I	212_N	0.616	0.63
282_D	286_N	0.615	0.63
215_P	222_T	0.613	0.63
122_I	125_F	0.612	0.63
176_R	179_P	0.611	0.63
346_L	349_G	0.611	0.63
56_I	70_S	0.609	0.62
46_S	101_F	0.608	0.62
218_E	234_V	0.608	0.62
207_F	212_N	0.607	0.62
300_L	304_C	0.607	0.62
33_P	37_L	0.605	0.62
57_I	66_V	0.605	0.62
181_Y	184_T	0.605	0.62
189_Q	205_N	0.604	0.62
193_V	204_K	0.603	0.62
44_L	78_L	0.603	0.62
53_K	66_V	0.602	0.62
117_D	121_A	0.601	0.61
318_L	352_G	0.601	0.61
57_I	60_V	0.601	0.61
219_L	226_I	0.601	0.61
36_E	73_R	0.601	0.61
327_L	340_I	0.600	0.61
193_V	201_I	0.600	0.61
71_L	75_I	0.596	0.61
39_V	73_R	0.595	0.61
67_S	72_T	0.594	0.61
91_I	94_I	0.592	0.60
53_K	101_F	0.592	0.60
396_D	428_K	0.592	0.60
33_P	72_T	0.592	0.60
38_G	55_M	0.591	0.60
277_A	281_F	0.591	0.60
93_T	98_G	0.591	0.60
231_L	236_K	0.591	0.60
378_R	394_C	0.588	0.60
409_V	415_V	0.587	0.60
25_Q	89_R	0.587	0.60
103_G	106_F	0.586	0.60
223_S	234_V	0.584	0.59
200_L	212_N	0.583	0.59
302_A	326_L	0.581	0.59
141_L	146_S	0.581	0.59
402_E	407_K	0.580	0.59
255_L	284_L	0.579	0.59
341_L	367_H	0.577	0.58
36_E	76_Y	0.577	0.58
175_S	178_K	0.576	0.58
50_V	53_K	0.575	0.58
205_N	214_L	0.574	0.58
128_S	133_D	0.574	0.58
62_K	65_I	0.572	0.58
346_L	361_F	0.572	0.58
36_E	97_K	0.571	0.58
178_K	187_I	0.571	0.58
227_I	230_I	0.570	0.57
224_Q	234_V	0.570	0.57
262_G	280_I	0.569	0.57
225_F	231_L	0.569	0.57
419_V	427_I	0.568	0.57
398_S	431_Y	0.568	0.57
255_L	260_L	0.565	0.57
118_Y	122_I	0.563	0.57
419_V	430_Y	0.563	0.57
320_A	350_L	0.563	0.57
412_K	429_L	0.562	0.56
360_L	386_E	0.562	0.56
216_V	223_S	0.561	0.56
399_L	412_K	0.560	0.56
191_N	197_Y	0.559	0.56
53_K	57_I	0.559	0.56
117_D	124_P	0.559	0.56
237_P	240_S	0.558	0.56
140_E	146_S	0.557	0.56
80_C	83_E	0.556	0.56
127_T	136_I	0.556	0.56
274_I	304_C	0.555	0.55
59_S	68_D	0.554	0.55
50_V	60_V	0.553	0.55
23_L	97_K	0.552	0.55
352_G	421_N	0.552	0.55
169_S	172_S	0.551	0.55
121_A	126_T	0.551	0.55
38_G	41_I	0.550	0.55
331_S	344_M	0.550	0.55
220_H	226_I	0.550	0.55
411_I	433_E	0.549	0.55
37_L	67_S	0.548	0.55
62_K	66_V	0.548	0.55
345_G	371_I	0.548	0.55
41_I	46_S	0.548	0.55
380_L	383_F	0.548	0.55
422_P	428_K	0.547	0.54
284_L	297_C	0.547	0.54
53_K	71_L	0.547	0.54
53_K	99_Y	0.547	0.54
141_L	151_D	0.546	0.54
201_I	210_A	0.546	0.54
354_A	384_H	0.545	0.54
256_S	264_K	0.544	0.54
229_N	232_Q	0.543	0.54
21_G	66_V	0.543	0.54
37_L	95_Y	0.542	0.54
334_T	337_D	0.542	0.54
33_P	70_S	0.542	0.54
180_D	184_T	0.541	0.54
140_E	159_A	0.540	0.53
270_T	273_S	0.540	0.53
425_N	428_K	0.539	0.53
181_Y	188_N	0.539	0.53
119_S	125_F	0.538	0.53
405_R	408_A	0.538	0.53
401_L	405_R	0.537	0.53
59_S	62_K	0.535	0.53
171_N	175_S	0.535	0.53
253_H	260_L	0.535	0.53
70_S	92_E	0.535	0.53
167_H	173_F	0.534	0.53
275_Y	308_L	0.534	0.53
179_P	186_R	0.533	0.53
136_I	257_D	0.533	0.53
134_P	142_V	0.532	0.52
410_V	414_C	0.532	0.52
216_V	224_Q	0.532	0.52
291_Q	336_V	0.530	0.52
405_R	409_V	0.530	0.52
402_E	408_A	0.529	0.52
34_Q	38_G	0.529	0.52
21_G	41_I	0.528	0.52
223_S	228_D	0.528	0.52
341_L	363_Q	0.527	0.52
200_L	208_L	0.525	0.51
342_A	381_V	0.525	0.51
74_C	80_C	0.525	0.51
33_P	80_C	0.523	0.51
60_V	72_T	0.523	0.51
208_L	212_N	0.522	0.51
325_E	329_Y	0.520	0.51
122_I	140_E	0.520	0.51
220_H	230_I	0.519	0.51
428_K	432_K	0.518	0.50
182_F	187_I	0.518	0.50
141_L	144_I	0.518	0.50
32_I	221_N	0.518	0.50
376_Y	395_I	0.517	0.50
138_N	153_L	0.517	0.50
77_S	101_F	0.516	0.50
208_L	213_H	0.516	0.50
67_S	73_R	0.516	0.50
184_T	187_I	0.515	0.50
170_Q	177_F	0.514	0.50
265_E	276_R	0.514	0.50
144_I	160_A	0.510	0.49
70_S	100_R	0.509	0.49
227_I	234_V	0.509	0.49
321_Q	325_E	0.508	0.49
197_Y	202_D	0.508	0.49
85_I	91_I	0.508	0.49
425_N	429_L	0.506	0.49
72_T	95_Y	0.505	0.49
138_N	141_L	0.505	0.49
47_A	50_V	0.504	0.49
238_E	387_K	0.503	0.48
200_L	209_I	0.502	0.48
207_F	214_L	0.501	0.48
180_D	186_R	0.500	0.48
64_I	97_K	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3ly7A	2	0.6769	100	0.609	Contact Map
4gywA	2	0.417	99.9	0.726	Contact Map
1dceA	1	0.5437	99.9	0.726	Contact Map
4l9pA	1	0.4913	99.9	0.726	Contact Map
3dssA	1	0.4454	99.9	0.732	Contact Map
1w3bA	2	0.4782	99.9	0.736	Contact Map
3q7aA	1	0.4825	99.9	0.737	Contact Map
2vsyA	1	0.3406	99.9	0.737	Contact Map
5aioA	1	0.4039	99.9	0.743	Contact Map
3urzA	1	0.4105	99.9	0.744	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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