FADI - ECOLI - GREMLIN Contacts

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FADI - 3-ketoacyl-CoA thiolase

UniProt:	P76503	Sequences: MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG14128
Length:	436 (384)
Sequences:	11795 (6114)
Seq/√Len:	312.0

ECOLI - FADI PAAJ ATOB FADA YQEF
BACSU - FADA THL YHFS
HALSA - Q9HNK4 Q9HRI8 Q9HQZ8
SULSO - Q97W61 Q97VV9 Q97VU9 Q97WQ7 Q97UA5 Q97VJ9 Q97UW8 Q97WQ6 Q97VD4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
208_R	212_R	3.550	1.00
201_Q	355_Q	3.429	1.00
14_R	287_E	3.229	1.00
289_R	293_L	3.203	1.00
47_E	50_A	3.053	1.00
207_H	250_L	2.774	1.00
405_T	417_G	2.769	1.00
13_D	288_S	2.732	1.00
202_Q	266_T	2.680	1.00
118_I	121_G	2.666	1.00
106_V	402_I	2.662	1.00
215_Q	219_D	2.661	1.00
218_S	246_G	2.638	1.00
208_R	211_Q	2.622	1.00
287_E	291_K	2.618	1.00
16_A	290_A	2.447	1.00
289_R	292_E	2.420	1.00
20_G	403_T	2.390	1.00
21_L	51_R	2.345	1.00
326_A	432_V	2.342	1.00
299_G	406_L	2.304	1.00
409_L	414_G	2.183	1.00
41_G	64_F	2.183	1.00
326_A	330_A	2.149	1.00
223_K	239_V	2.133	1.00
243_N	274_P	2.115	1.00
48_L	283_I	2.037	1.00
113_L	284_L	2.028	1.00
217_W	244_I	2.025	1.00
303_S	330_A	1.995	1.00
332_L	416_F	1.990	1.00
193_K	262_R	1.988	1.00
208_R	378_D	1.985	1.00
339_L	383_V	1.977	1.00
45_V	122_I	1.973	1.00
298_L	410_R	1.970	1.00
300_Y	434_E	1.930	1.00
214_A	244_I	1.921	1.00
310_D	313_Q	1.910	1.00
43_M	229_A	1.903	1.00
338_T	414_G	1.880	1.00
214_A	218_S	1.854	1.00
194_T	314_D	1.841	1.00
109_V	121_G	1.836	1.00
323_T	420_T	1.832	1.00
200_E	204_A	1.822	1.00
354_I	378_D	1.811	1.00
58_V	293_L	1.810	1.00
253_Y	270_A	1.794	1.00
303_S	326_A	1.793	1.00
198_T	201_Q	1.779	1.00
45_V	80_I	1.779	1.00
113_L	286_T	1.764	1.00
64_F	124_G	1.754	1.00
280_A	399_A	1.737	1.00
93_Y	108_N	1.721	1.00
230_F	237_P	1.705	1.00
55_P	58_V	1.681	1.00
120_A	285_M	1.678	1.00
31_A	238_L	1.678	1.00
334_M	340_I	1.673	1.00
223_K	240_E	1.655	1.00
285_M	290_A	1.641	1.00
221_K	384_L	1.630	1.00
217_W	226_V	1.629	1.00
14_R	300_Y	1.627	1.00
39_D	83_G	1.626	1.00
18_V	285_M	1.618	1.00
384_L	408_E	1.614	1.00
408_E	412_R	1.608	1.00
282_V	399_A	1.597	1.00
252_D	255_K	1.594	1.00
207_H	211_Q	1.592	1.00
47_E	227_M	1.578	1.00
43_M	227_M	1.570	1.00
332_L	432_V	1.567	1.00
128_S	131_V	1.567	1.00
185_G	260_F	1.563	1.00
337_L	432_V	1.559	1.00
285_M	289_R	1.553	1.00
224_E	410_R	1.545	1.00
41_G	80_I	1.542	1.00
233_P	237_P	1.532	1.00
354_I	381_F	1.518	1.00
332_L	337_L	1.515	1.00
201_Q	204_A	1.512	1.00
217_W	240_E	1.511	1.00
204_A	208_R	1.511	1.00
76_I	126_A	1.511	1.00
339_L	408_E	1.497	1.00
302_R	434_E	1.481	1.00
324_P	328_E	1.479	1.00
337_L	340_I	1.476	1.00
377_D	380_K	1.474	1.00
88_V	310_D	1.469	1.00
211_Q	215_Q	1.464	1.00
19_S	52_S	1.461	1.00
402_I	433_L	1.452	1.00
119_R	286_T	1.448	1.00
107_A	431_M	1.446	1.00
32_F	238_L	1.444	1.00
46_G	50_A	1.439	1.00
119_R	289_R	1.431	1.00
112_S	118_I	1.430	1.00
408_E	411_R	1.409	1.00
135_G	168_L	1.406	1.00
322_S	430_A	1.403	1.00
340_I	418_L	1.393	1.00
233_P	236_Q	1.386	1.00
324_P	356_L	1.384	1.00
286_T	289_R	1.381	1.00
418_L	432_V	1.370	1.00
415_G	434_E	1.368	1.00
48_L	52_S	1.364	1.00
100_A	429_A	1.363	1.00
307_T	321_W	1.356	1.00
109_V	284_L	1.340	1.00
214_A	247_N	1.337	1.00
221_K	408_E	1.335	1.00
47_E	51_R	1.330	1.00
44_V	281_A	1.326	1.00
305_A	325_L	1.317	1.00
42_K	83_G	1.312	1.00
197_I	202_Q	1.308	1.00
323_T	418_L	1.300	1.00
321_W	324_P	1.295	1.00
64_F	281_A	1.295	1.00
337_L	416_F	1.289	1.00
45_V	86_M	1.273	1.00
25_F	396_A	1.267	1.00
13_D	286_T	1.257	1.00
211_Q	247_N	1.256	1.00
106_V	282_V	1.255	1.00
309_I	317_L	1.245	1.00
221_K	411_R	1.241	1.00
317_L	320_A	1.240	1.00
25_F	390_Y	1.237	1.00
339_L	412_R	1.233	1.00
197_I	351_L	1.232	1.00
204_A	250_L	1.223	1.00
100_A	423_A	1.219	1.00
21_L	227_M	1.203	1.00
288_S	292_E	1.194	1.00
107_A	304_Y	1.193	1.00
111_E	117_T	1.186	1.00
19_S	48_L	1.180	1.00
325_L	328_E	1.180	1.00
194_T	313_Q	1.178	1.00
224_E	411_R	1.173	1.00
383_V	408_E	1.157	1.00
195_Y	317_L	1.157	1.00
214_A	246_G	1.157	1.00
66_Q	69_Q	1.155	1.00
49_L	86_M	1.154	1.00
103_F	402_I	1.151	1.00
225_E	404_Q	1.149	1.00
403_T	407_H	1.144	1.00
16_A	285_M	1.135	1.00
60_E	118_I	1.126	1.00
305_A	326_A	1.125	1.00
24_P	238_L	1.124	1.00
302_R	416_F	1.120	1.00
334_M	337_L	1.115	1.00
314_D	317_L	1.111	1.00
58_V	289_R	1.111	1.00
330_A	432_V	1.103	1.00
23_T	44_V	1.101	1.00
333_T	336_D	1.097	1.00
120_A	289_R	1.093	1.00
224_E	407_H	1.092	1.00
59_I	120_A	1.090	1.00
62_L	81_V	1.090	1.00
20_G	407_H	1.084	1.00
301_L	431_M	1.081	1.00
185_G	259_A	1.080	1.00
405_T	419_V	1.075	1.00
400_R	404_Q	1.069	1.00
195_Y	356_L	1.065	1.00
338_T	380_K	1.065	1.00
17_I	433_L	1.061	1.00
298_L	406_L	1.060	1.00
205_L	350_T	1.059	1.00
44_V	47_E	1.056	1.00
208_R	379_S	1.052	1.00
44_V	279_A	1.051	1.00
416_F	434_E	1.051	1.00
337_L	418_L	1.050	1.00
213_A	244_I	1.050	1.00
29_A	141_A	1.048	1.00
383_V	412_R	1.040	1.00
109_V	123_A	1.036	1.00
16_A	300_Y	1.035	1.00
117_T	329_R	1.033	1.00
15_I	284_L	1.032	1.00
104_Q	108_N	1.027	1.00
27_R	243_N	1.024	1.00
25_F	276_T	1.023	1.00
192_A	348_A	1.022	1.00
63_V	105_A	1.018	1.00
26_A	242_N	1.015	1.00
82_L	88_V	1.010	1.00
280_A	396_A	1.010	1.00
320_A	356_L	1.010	1.00
114_M	117_T	1.002	1.00
401_M	419_V	1.001	1.00
384_L	411_R	0.996	1.00
317_L	352_A	0.995	1.00
338_T	409_L	0.994	1.00
191_M	317_L	0.993	1.00
122_I	283_I	0.991	1.00
186_D	262_R	0.982	1.00
191_M	352_A	0.977	1.00
43_M	47_E	0.974	1.00
207_H	247_N	0.966	1.00
324_P	357_L	0.965	1.00
287_E	300_Y	0.964	1.00
60_E	119_R	0.964	1.00
342_M	420_T	0.962	1.00
13_D	119_R	0.961	1.00
376_V	381_F	0.959	1.00
248_S	253_Y	0.953	1.00
189_E	262_R	0.950	1.00
307_T	325_L	0.947	1.00
58_V	292_E	0.946	1.00
18_V	295_L	0.944	1.00
86_M	90_T	0.942	1.00
203_D	271_N	0.940	1.00
339_L	405_T	0.938	1.00
16_A	287_E	0.938	1.00
212_R	378_D	0.936	1.00
402_I	431_M	0.935	1.00
63_V	109_V	0.930	1.00
36_P	39_D	0.925	1.00
296_V	410_R	0.922	1.00
309_I	318_G	0.920	1.00
285_M	295_L	0.920	1.00
166_R	169_M	0.920	1.00
250_L	254_A	0.920	1.00
406_L	410_R	0.910	1.00
63_V	121_G	0.905	1.00
21_L	47_E	0.905	1.00
111_E	115_A	0.904	1.00
72_E	131_V	0.903	1.00
416_F	432_V	0.903	1.00
387_S	397_T	0.902	1.00
106_V	284_L	0.898	1.00
406_L	433_L	0.893	1.00
215_Q	221_K	0.890	1.00
317_L	356_L	0.888	1.00
42_K	46_G	0.885	1.00
347_A	388_I	0.884	1.00
189_E	193_K	0.883	1.00
170_P	183_R	0.883	1.00
303_S	432_V	0.881	1.00
232_P	237_P	0.880	1.00
423_A	429_A	0.880	1.00
15_I	114_M	0.877	1.00
58_V	120_A	0.875	1.00
303_S	329_R	0.874	1.00
35_I	43_M	0.873	1.00
217_W	246_G	0.872	1.00
64_F	77_A	0.872	1.00
123_A	282_V	0.869	1.00
215_Q	218_S	0.867	1.00
176_A	181_G	0.867	1.00
23_T	43_M	0.866	1.00
323_T	430_A	0.866	1.00
256_L	270_A	0.866	1.00
211_Q	214_A	0.865	1.00
45_V	62_L	0.859	1.00
48_L	122_I	0.857	1.00
117_T	304_Y	0.850	1.00
39_D	42_K	0.849	1.00
103_F	419_V	0.849	1.00
107_A	429_A	0.847	1.00
49_L	54_I	0.846	1.00
20_G	282_V	0.841	1.00
309_I	321_W	0.840	1.00
325_L	329_R	0.840	1.00
65_G	101_T	0.838	1.00
310_D	314_D	0.838	1.00
103_F	431_M	0.837	1.00
15_I	286_T	0.836	1.00
105_A	399_A	0.833	1.00
119_R	329_R	0.832	1.00
217_W	223_K	0.832	1.00
219_D	411_R	0.832	1.00
298_L	407_H	0.828	1.00
340_I	376_V	0.820	1.00
95_V	108_N	0.819	1.00
19_S	51_R	0.816	1.00
288_S	291_K	0.816	1.00
110_A	301_L	0.815	1.00
63_V	93_Y	0.815	1.00
207_H	252_D	0.809	1.00
210_H	243_N	0.807	1.00
327_L	334_M	0.804	1.00
306_F	429_A	0.802	1.00
38_V	72_E	0.799	1.00
43_M	46_G	0.799	1.00
35_I	131_V	0.797	1.00
354_I	376_V	0.794	1.00
384_L	412_R	0.793	1.00
350_T	354_I	0.791	1.00
213_A	217_W	0.789	1.00
218_S	240_E	0.787	1.00
187_T	315_M	0.787	1.00
60_E	325_L	0.782	1.00
338_T	416_F	0.780	1.00
61_Q	97_R	0.780	1.00
183_R	186_D	0.778	1.00
35_I	128_S	0.777	1.00
204_A	378_D	0.774	0.99
97_R	306_F	0.772	0.99
201_Q	351_L	0.770	0.99
212_R	215_Q	0.769	0.99
231_I	238_L	0.766	0.99
93_Y	104_Q	0.765	0.99
24_P	43_M	0.763	0.99
46_G	85_G	0.758	0.99
338_T	415_G	0.758	0.99
335_S	380_K	0.754	0.99
170_P	176_A	0.753	0.99
136_V	165_L	0.752	0.99
56_A	87_N	0.752	0.99
106_V	123_A	0.752	0.99
66_Q	76_I	0.751	0.99
195_Y	314_D	0.751	0.99
280_A	403_T	0.750	0.99
134_I	139_K	0.748	0.99
69_Q	94_S	0.747	0.99
37_A	126_A	0.745	0.99
409_L	417_G	0.744	0.99
36_P	131_V	0.744	0.99
23_T	229_A	0.743	0.99
188_A	267_V	0.742	0.99
66_Q	72_E	0.741	0.99
59_I	86_M	0.741	0.99
64_F	80_I	0.739	0.99
61_Q	306_F	0.738	0.99
86_M	122_I	0.735	0.99
57_E	89_H	0.735	0.99
111_E	114_M	0.734	0.99
31_A	242_N	0.729	0.99
14_R	114_M	0.725	0.99
247_N	252_D	0.724	0.99
267_V	272_S	0.724	0.99
46_G	56_A	0.721	0.99
323_T	342_M	0.720	0.99
342_M	353_N	0.719	0.99
15_I	110_A	0.719	0.99
18_V	290_A	0.718	0.99
59_I	122_I	0.716	0.99
326_A	418_L	0.715	0.99
282_V	403_T	0.714	0.99
213_A	390_Y	0.714	0.99
108_N	111_E	0.713	0.99
189_E	265_G	0.712	0.99
335_S	358_G	0.712	0.99
68_V	132_L	0.711	0.99
205_L	351_L	0.709	0.99
332_L	336_D	0.707	0.99
323_T	357_L	0.706	0.99
234_Y	237_P	0.705	0.99
340_I	420_T	0.704	0.99
122_I	281_A	0.698	0.99
75_N	427_L	0.698	0.99
213_A	389_A	0.698	0.99
287_E	290_A	0.697	0.99
160_F	169_M	0.696	0.99
207_H	248_S	0.694	0.99
46_G	84_T	0.694	0.99
195_Y	352_A	0.691	0.99
49_L	56_A	0.690	0.99
210_H	244_I	0.688	0.99
112_S	117_T	0.686	0.99
42_K	84_T	0.685	0.99
402_I	419_V	0.684	0.99
129_S	394_F	0.684	0.99
248_S	252_D	0.682	0.99
108_N	112_S	0.681	0.99
91_D	306_F	0.681	0.99
97_R	104_Q	0.681	0.99
71_P	135_G	0.681	0.99
24_P	239_V	0.679	0.99
81_V	92_A	0.678	0.99
20_G	406_L	0.676	0.99
21_L	48_L	0.676	0.99
220_G	223_K	0.675	0.99
320_A	324_P	0.672	0.99
162_R	166_R	0.671	0.99
189_E	267_V	0.671	0.99
166_R	172_P	0.669	0.99
182_L	313_Q	0.668	0.98
120_A	293_L	0.668	0.98
40_L	229_A	0.668	0.98
352_A	356_L	0.668	0.98
103_F	429_A	0.664	0.98
44_V	48_L	0.664	0.98
207_H	249_S	0.663	0.98
17_I	284_L	0.663	0.98
197_I	355_Q	0.660	0.98
175_V	179_S	0.660	0.98
33_H	141_A	0.659	0.98
81_V	86_M	0.658	0.98
63_V	108_N	0.656	0.98
60_E	121_G	0.656	0.98
109_V	118_I	0.655	0.98
302_R	330_A	0.653	0.98
19_S	298_L	0.651	0.98
78_R	82_L	0.651	0.98
231_I	236_Q	0.649	0.98
25_F	400_R	0.648	0.98
397_T	419_V	0.647	0.98
167_D	170_P	0.644	0.98
67_V	98_A	0.643	0.98
182_L	186_D	0.642	0.98
423_A	427_L	0.642	0.98
221_K	412_R	0.642	0.98
52_S	283_I	0.642	0.98
396_A	399_A	0.641	0.98
302_R	332_L	0.640	0.98
210_H	214_A	0.640	0.98
34_G	131_V	0.638	0.98
182_L	190_Q	0.637	0.98
62_L	86_M	0.637	0.98
49_L	59_I	0.637	0.98
351_L	355_Q	0.636	0.98
358_G	377_D	0.636	0.98
323_T	353_N	0.635	0.98
301_L	304_Y	0.633	0.98
119_R	292_E	0.632	0.98
104_Q	107_A	0.632	0.98
339_L	414_G	0.631	0.98
192_A	266_T	0.628	0.98
160_F	170_P	0.628	0.98
21_L	52_S	0.628	0.98
16_A	293_L	0.627	0.98
225_E	407_H	0.625	0.98
80_I	126_A	0.623	0.98
24_P	240_E	0.623	0.98
29_A	130_S	0.623	0.98
13_D	114_M	0.623	0.98
188_A	348_A	0.622	0.98
206_A	253_Y	0.622	0.98
417_G	433_L	0.620	0.98
35_I	39_D	0.620	0.98
194_T	317_L	0.620	0.98
45_V	281_A	0.620	0.98
134_I	138_K	0.619	0.98
207_H	253_Y	0.618	0.98
164_R	167_D	0.617	0.97
222_L	390_Y	0.614	0.97
67_V	394_F	0.612	0.97
24_P	226_V	0.612	0.97
104_Q	112_S	0.611	0.97
350_T	381_F	0.611	0.97
62_L	90_T	0.606	0.97
342_M	350_T	0.606	0.97
41_G	124_G	0.606	0.97
397_T	401_M	0.605	0.97
336_D	416_F	0.604	0.97
49_L	53_E	0.604	0.97
21_L	44_V	0.603	0.97
200_E	250_L	0.602	0.97
188_A	192_A	0.600	0.97
114_M	304_Y	0.599	0.97
378_D	381_F	0.598	0.97
327_L	330_A	0.592	0.97
205_L	386_G	0.592	0.97
186_D	190_Q	0.591	0.97
26_A	32_F	0.589	0.97
326_A	337_L	0.587	0.97
45_V	64_F	0.587	0.97
262_R	265_G	0.586	0.97
62_L	122_I	0.585	0.97
287_E	297_P	0.585	0.97
161_S	167_D	0.584	0.97
45_V	49_L	0.584	0.97
104_Q	306_F	0.584	0.97
112_S	121_G	0.584	0.97
191_M	348_A	0.579	0.96
249_S	252_D	0.579	0.96
75_N	98_A	0.578	0.96
21_L	24_P	0.578	0.96
23_T	40_L	0.576	0.96
163_L	167_D	0.576	0.96
410_R	413_G	0.575	0.96
357_L	376_V	0.575	0.96
243_N	276_T	0.574	0.96
41_G	126_A	0.571	0.96
240_E	246_G	0.571	0.96
17_I	406_L	0.571	0.96
284_L	301_L	0.570	0.96
334_M	376_V	0.569	0.96
137_S	166_R	0.569	0.96
110_A	114_M	0.568	0.96
48_L	281_A	0.568	0.96
301_L	433_L	0.568	0.96
390_Y	404_Q	0.568	0.96
26_A	238_L	0.567	0.96
231_I	234_Y	0.566	0.96
413_G	416_F	0.566	0.96
61_Q	112_S	0.566	0.96
124_G	281_A	0.565	0.96
165_L	169_M	0.562	0.96
309_I	314_D	0.561	0.96
323_T	334_M	0.557	0.95
189_E	260_F	0.557	0.95
340_I	380_K	0.556	0.95
230_F	233_P	0.555	0.95
342_M	354_I	0.553	0.95
77_A	94_S	0.553	0.95
193_K	264_H	0.553	0.95
49_L	52_S	0.553	0.95
194_T	310_D	0.552	0.95
43_M	230_F	0.551	0.95
240_E	244_I	0.551	0.95
104_Q	111_E	0.551	0.95
54_I	283_I	0.550	0.95
211_Q	250_L	0.550	0.95
302_R	432_V	0.549	0.95
290_A	293_L	0.547	0.95
52_S	56_A	0.546	0.95
228_T	239_V	0.546	0.95
403_T	406_L	0.545	0.95
187_T	316_L	0.545	0.95
15_I	113_L	0.543	0.95
349_Q	353_N	0.543	0.95
80_I	84_T	0.542	0.95
38_V	83_G	0.542	0.95
199_R	203_D	0.540	0.95
324_P	358_G	0.539	0.95
407_H	411_R	0.535	0.94
409_L	433_L	0.534	0.94
35_I	229_A	0.533	0.94
204_A	254_A	0.532	0.94
63_V	95_V	0.532	0.94
204_A	211_Q	0.532	0.94
319_P	422_C	0.531	0.94
32_F	35_I	0.531	0.94
328_E	333_T	0.531	0.94
16_A	286_T	0.526	0.94
202_Q	267_V	0.525	0.94
61_Q	104_Q	0.524	0.94
185_G	265_G	0.523	0.94
51_R	407_H	0.521	0.94
206_A	271_N	0.520	0.93
286_T	290_A	0.520	0.93
190_Q	194_T	0.519	0.93
299_G	433_L	0.519	0.93
15_I	18_V	0.518	0.93
37_A	44_V	0.517	0.93
212_R	381_F	0.516	0.93
214_A	217_W	0.515	0.93
174_A	394_F	0.513	0.93
44_V	64_F	0.512	0.93
320_A	353_N	0.511	0.93
401_M	421_A	0.511	0.93
200_E	254_A	0.511	0.93
139_K	163_L	0.510	0.93
399_A	403_T	0.510	0.93
35_I	40_L	0.510	0.93
419_V	433_L	0.508	0.93
259_A	269_A	0.506	0.93
76_I	80_I	0.506	0.93
290_A	297_P	0.506	0.93
191_M	316_L	0.505	0.92
160_F	183_R	0.505	0.92
37_A	131_V	0.502	0.92
103_F	421_A	0.502	0.92
396_A	400_R	0.502	0.92
28_Q	275_L	0.502	0.92
35_I	232_P	0.501	0.92
66_Q	94_S	0.501	0.92
38_V	42_K	0.500	0.92

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2wu9A	2	0.8761	100	0.369	Contact Map
3ss6A	4	0.8991	100	0.388	Contact Map
2vu1A	4	0.8945	100	0.389	Contact Map
1wl4A	4	0.8945	100	0.392	Contact Map
4c2jA	4	0.8968	100	0.398	Contact Map
4o9aA	4	0.8922	100	0.399	Contact Map
4n46A	4	0.8945	100	0.4	Contact Map
2iikA	2	0.8876	100	0.4	Contact Map
4e1lA	4	0.883	100	0.403	Contact Map
2ib8A	4	0.8968	100	0.403	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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