ATOE - ECOLI - GREMLIN Contacts

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ATOE - Short-chain fatty acids transporter

UniProt:	P76460	Sequences: MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11671
Length:	440 (437)
Sequences:	589 (396)
Seq/√Len:	18.9

ECOLI - ATOE

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
35_A	319_M	6.332	1.00
35_A	46_M	5.741	1.00
46_M	319_M	5.383	1.00
197_V	428_F	5.035	1.00
282_G	292_Y	4.810	1.00
371_V	385_S	4.107	1.00
140_I	407_A	3.652	1.00
165_P	170_E	3.549	1.00
73_A	292_Y	3.503	1.00
188_I	192_V	3.372	1.00
350_S	363_H	3.307	1.00
156_G	159_P	3.153	0.99
148_L	429_S	3.113	0.99
93_T	96_Q	2.881	0.99
333_F	336_V	2.722	0.98
73_A	296_I	2.601	0.98
393_E	396_M	2.545	0.97
137_P	421_Y	2.539	0.97
80_V	119_V	2.514	0.97
102_T	202_T	2.494	0.97
65_A	307_L	2.487	0.97
363_H	370_F	2.487	0.97
49_M	322_H	2.462	0.96
250_I	312_F	2.393	0.96
99_M	103_F	2.370	0.96
151_G	156_G	2.293	0.95
375_A	383_G	2.271	0.94
363_H	367_Q	2.263	0.94
5_I	9_M	2.231	0.94
29_L	246_L	2.208	0.94
363_H	396_M	2.183	0.93
158_M	386_V	2.148	0.93
166_G	170_E	2.119	0.92
248_L	284_L	2.097	0.92
300_A	307_L	2.091	0.92
85_R	126_E	2.043	0.91
254_G	280_I	2.039	0.90
167_N	173_A	2.038	0.90
251_G	284_L	2.037	0.90
47_V	253_L	2.017	0.90
342_F	385_S	2.015	0.90
185_G	189_F	1.960	0.89
363_H	393_E	1.898	0.87
395_W	430_G	1.895	0.87
276_L	280_I	1.894	0.87
260_M	264_E	1.880	0.86
258_L	277_M	1.877	0.86
91_A	100_L	1.876	0.86
150_W	360_G	1.868	0.86
351_A	396_M	1.859	0.86
19_D	241_E	1.859	0.86
6_S	9_M	1.834	0.85
398_M	429_S	1.829	0.85
292_Y	308_V	1.808	0.84
350_S	393_E	1.799	0.84
306_I	310_F	1.794	0.84
290_M	294_R	1.790	0.83
64_M	310_F	1.787	0.83
134_S	139_L	1.784	0.83
106_S	149_T	1.781	0.83
87_A	123_F	1.777	0.83
54_F	314_A	1.776	0.83
102_T	136_Y	1.773	0.83
108_A	119_V	1.763	0.82
251_G	255_I	1.737	0.82
354_N	396_M	1.721	0.81
29_L	249_I	1.715	0.81
38_L	328_L	1.688	0.80
67_I	114_G	1.655	0.78
86_T	90_A	1.652	0.78
162_A	386_V	1.631	0.77
56_N	314_A	1.628	0.77
162_A	167_N	1.620	0.77
125_R	130_R	1.601	0.76
151_G	159_P	1.600	0.76
350_S	396_M	1.598	0.76
58_L	275_N	1.591	0.75
106_S	195_I	1.589	0.75
391_Y	433_F	1.582	0.75
350_S	370_F	1.578	0.75
431_V	435_I	1.576	0.75
200_F	204_M	1.574	0.75
32_F	46_M	1.563	0.74
39_T	328_L	1.563	0.74
107_V	431_V	1.562	0.74
344_V	438_T	1.558	0.74
281_A	414_G	1.551	0.73
150_W	390_A	1.538	0.73
167_N	175_L	1.532	0.72
102_T	145_I	1.524	0.72
148_L	194_L	1.518	0.72
49_M	323_S	1.516	0.72
61_G	275_N	1.513	0.71
62_M	305_G	1.510	0.71
248_L	252_A	1.509	0.71
344_V	434_V	1.486	0.70
215_I	220_L	1.477	0.70
349_S	367_Q	1.466	0.69
333_F	337_A	1.464	0.69
330_T	353_I	1.458	0.69
174_G	324_G	1.455	0.68
164_T	174_G	1.451	0.68
64_M	112_N	1.449	0.68
137_P	394_Q	1.447	0.68
332_F	336_V	1.442	0.68
285_L	309_Q	1.431	0.67
115_F	133_G	1.429	0.67
44_I	256_A	1.423	0.67
58_L	314_A	1.414	0.66
427_L	431_V	1.414	0.66
167_N	324_G	1.411	0.66
36_L	40_P	1.410	0.66
31_T	319_M	1.400	0.65
48_K	52_D	1.399	0.65
41_Q	49_M	1.390	0.65
394_Q	433_F	1.387	0.65
137_P	368_G	1.365	0.63
116_G	147_F	1.364	0.63
375_A	382_L	1.362	0.63
373_P	377_A	1.355	0.63
23_F	356_A	1.343	0.62
24_A	410_I	1.343	0.62
342_F	375_A	1.340	0.62
103_F	196_V	1.340	0.62
339_K	378_L	1.336	0.62
67_I	105_G	1.335	0.62
176_I	275_N	1.330	0.61
32_F	35_A	1.330	0.61
113_W	271_I	1.328	0.61
35_A	49_M	1.317	0.60
37_W	82_S	1.315	0.60
413_L	418_I	1.315	0.60
82_S	86_T	1.315	0.60
342_F	380_A	1.303	0.60
99_M	192_V	1.301	0.59
78_A	82_S	1.295	0.59
86_T	239_R	1.293	0.59
146_G	150_W	1.287	0.59
337_A	342_F	1.286	0.59
118_V	270_T	1.285	0.58
167_N	174_G	1.278	0.58
46_M	49_M	1.276	0.58
367_Q	370_F	1.268	0.57
215_I	219_L	1.268	0.57
73_A	282_G	1.245	0.56
161_L	168_P	1.244	0.56
330_T	355_F	1.244	0.56
346_T	388_A	1.237	0.56
32_F	319_M	1.231	0.55
71_G	114_G	1.227	0.55
194_L	429_S	1.226	0.55
173_A	323_S	1.221	0.55
93_T	245_I	1.217	0.54
79_P	83_L	1.216	0.54
293_M	296_I	1.215	0.54
57_L	314_A	1.214	0.54
375_A	385_S	1.212	0.54
84_L	140_I	1.211	0.54
55_W	275_N	1.206	0.54
152_G	190_I	1.206	0.54
354_N	363_H	1.203	0.53
367_Q	389_I	1.202	0.53
373_P	414_G	1.201	0.53
118_V	330_T	1.197	0.53
255_I	284_L	1.186	0.52
167_N	323_S	1.174	0.52
327_G	331_E	1.172	0.51
11_R	195_I	1.162	0.51
25_M	250_I	1.150	0.50
373_P	376_Q	1.145	0.50
74_L	281_A	1.143	0.50
162_A	173_A	1.143	0.50
347_F	426_L	1.140	0.49
320_M	362_G	1.137	0.49
344_V	348_F	1.137	0.49
24_A	125_R	1.133	0.49
193_A	432_I	1.131	0.49
32_F	43_P	1.130	0.49
188_I	288_T	1.127	0.49
155_S	438_T	1.126	0.49
7_R	14_S	1.117	0.48
91_A	368_G	1.116	0.48
17_L	419_M	1.113	0.48
398_M	425_A	1.112	0.48
119_V	140_I	1.112	0.48
54_F	312_F	1.111	0.48
127_V	133_G	1.109	0.47
292_Y	368_G	1.106	0.47
166_G	427_L	1.102	0.47
98_V	115_F	1.101	0.47
91_A	94_P	1.087	0.46
169_V	323_S	1.084	0.46
138_L	354_N	1.082	0.46
354_N	393_E	1.067	0.45
247_T	283_L	1.065	0.45
349_S	363_H	1.064	0.45
26_L	118_V	1.064	0.45
16_W	236_P	1.062	0.45
353_I	357_V	1.062	0.45
296_I	308_V	1.058	0.44
348_F	352_L	1.057	0.44
66_L	70_T	1.056	0.44
326_G	330_T	1.052	0.44
69_V	303_T	1.050	0.44
86_T	89_S	1.050	0.44
150_W	187_N	1.049	0.44
166_G	171_H	1.048	0.44
342_F	355_F	1.048	0.44
341_T	438_T	1.036	0.43
33_V	37_W	1.033	0.43
190_I	436_G	1.027	0.42
422_C	426_L	1.027	0.42
167_N	171_H	1.011	0.41
195_I	199_P	1.005	0.41
309_Q	417_D	1.001	0.41
67_I	353_I	1.001	0.41
351_A	393_E	0.999	0.41
11_R	15_R	0.999	0.41
411_A	415_V	0.998	0.41
332_F	335_N	0.990	0.40
178_V	182_L	0.987	0.40
131_V	134_S	0.984	0.40
330_T	334_I	0.982	0.40
300_A	308_V	0.980	0.39
172_I	372_I	0.974	0.39
348_F	434_V	0.973	0.39
317_Q	362_G	0.968	0.39
169_V	368_G	0.968	0.39
350_S	353_I	0.962	0.38
109_C	425_A	0.960	0.38
275_N	314_A	0.956	0.38
245_I	366_I	0.948	0.38
250_I	289_P	0.948	0.38
25_M	346_T	0.942	0.37
142_C	202_T	0.942	0.37
62_M	314_A	0.941	0.37
68_I	302_S	0.940	0.37
103_F	199_P	0.935	0.37
318_L	337_A	0.935	0.37
131_V	419_M	0.930	0.37
151_G	360_G	0.924	0.36
170_E	175_L	0.924	0.36
185_G	337_A	0.920	0.36
370_F	393_E	0.919	0.36
132_P	214_S	0.907	0.35
196_V	200_F	0.902	0.35
6_S	10_T	0.900	0.35
36_L	46_M	0.900	0.35
107_V	193_A	0.898	0.35
4_R	177_P	0.898	0.35
34_I	328_L	0.897	0.35
7_R	82_S	0.896	0.35
6_S	118_V	0.895	0.35
286_H	295_A	0.895	0.35
391_Y	394_Q	0.889	0.34
104_F	120_G	0.887	0.34
257_Y	276_L	0.887	0.34
142_C	344_V	0.884	0.34
121_A	404_A	0.880	0.34
100_L	103_F	0.879	0.34
317_Q	342_F	0.877	0.33
293_M	308_V	0.870	0.33
290_M	293_M	0.869	0.33
395_W	419_M	0.865	0.33
127_V	134_S	0.863	0.33
64_M	114_G	0.862	0.33
22_I	192_V	0.862	0.33
117_L	398_M	0.860	0.33
23_F	355_F	0.857	0.32
165_P	323_S	0.855	0.32
193_A	428_F	0.855	0.32
68_I	120_G	0.850	0.32
15_R	253_L	0.850	0.32
174_G	389_I	0.849	0.32
310_F	342_F	0.847	0.32
187_N	390_A	0.846	0.32
145_I	202_T	0.845	0.32
135_D	214_S	0.845	0.32
182_L	189_F	0.843	0.32
99_M	249_I	0.843	0.32
243_S	285_L	0.842	0.32
101_V	243_S	0.842	0.32
363_H	389_I	0.839	0.31
23_F	262_F	0.839	0.31
144_Y	362_G	0.834	0.31
244_R	287_K	0.831	0.31
159_P	393_E	0.831	0.31
28_T	50_W	0.830	0.31
315_G	421_Y	0.830	0.31
73_A	293_M	0.828	0.31
55_W	154_F	0.827	0.31
117_L	136_Y	0.822	0.30
210_S	221_M	0.820	0.30
73_A	414_G	0.820	0.30
72_H	414_G	0.816	0.30
12_F	16_W	0.814	0.30
19_D	309_Q	0.813	0.30
140_I	411_A	0.812	0.30
271_I	415_V	0.808	0.30
196_V	339_K	0.808	0.30
242_E	290_M	0.804	0.30
11_R	82_S	0.798	0.29
108_A	111_I	0.797	0.29
64_M	67_I	0.794	0.29
54_F	276_L	0.794	0.29
271_I	278_F	0.791	0.29
38_L	427_L	0.789	0.29
16_W	432_I	0.788	0.29
24_A	372_I	0.787	0.29
341_T	344_V	0.786	0.29
105_G	283_L	0.785	0.29
167_N	170_E	0.785	0.29
151_G	404_A	0.783	0.28
34_I	201_I	0.782	0.28
259_A	263_S	0.779	0.28
123_F	435_I	0.775	0.28
115_F	312_F	0.775	0.28
145_I	425_A	0.774	0.28
94_P	259_A	0.774	0.28
136_Y	305_G	0.774	0.28
151_G	393_E	0.771	0.28
21_L	356_A	0.771	0.28
58_L	62_M	0.771	0.28
435_I	439_L	0.770	0.28
351_A	363_H	0.769	0.28
136_Y	140_I	0.767	0.28
64_M	405_L	0.767	0.28
61_G	357_V	0.766	0.28
180_D	232_K	0.765	0.28
193_A	436_G	0.765	0.28
411_A	419_M	0.762	0.27
66_L	121_A	0.754	0.27
115_F	147_F	0.754	0.27
35_A	318_L	0.750	0.27
136_Y	147_F	0.750	0.27
336_V	370_F	0.749	0.27
244_R	248_L	0.749	0.27
207_P	278_F	0.743	0.26
193_A	197_V	0.742	0.26
196_V	428_F	0.742	0.26
187_N	391_Y	0.740	0.26
33_V	225_D	0.737	0.26
215_I	218_K	0.737	0.26
173_A	324_G	0.737	0.26
118_V	410_I	0.735	0.26
22_I	423_I	0.735	0.26
84_L	108_A	0.735	0.26
330_T	424_T	0.734	0.26
192_V	268_N	0.733	0.26
360_G	394_Q	0.732	0.26
25_M	289_P	0.729	0.26
171_H	179_G	0.728	0.26
285_L	417_D	0.726	0.26
350_S	354_N	0.725	0.26
391_Y	437_L	0.724	0.25
5_I	427_L	0.723	0.25
162_A	375_A	0.723	0.25
188_I	298_A	0.723	0.25
72_H	298_A	0.723	0.25
47_V	111_I	0.722	0.25
115_F	131_V	0.722	0.25
347_F	396_M	0.720	0.25
34_I	37_W	0.720	0.25
6_S	112_N	0.720	0.25
148_L	394_Q	0.719	0.25
152_G	391_Y	0.718	0.25
190_I	433_F	0.717	0.25
178_V	299_A	0.717	0.25
20_P	416_R	0.716	0.25
298_A	301_R	0.715	0.25
372_I	382_L	0.715	0.25
152_G	194_L	0.714	0.25
148_L	433_F	0.713	0.25
52_D	252_A	0.713	0.25
56_N	308_V	0.711	0.25
140_I	415_V	0.709	0.25
8_F	197_V	0.708	0.25
15_R	265_H	0.707	0.25
108_A	115_F	0.707	0.25
351_A	354_N	0.706	0.25
26_L	301_R	0.706	0.25
234_A	238_E	0.704	0.25
193_A	239_R	0.704	0.25
4_R	175_L	0.704	0.25
12_F	371_V	0.702	0.24
338_N	341_T	0.702	0.24
92_K	193_A	0.702	0.24
9_M	427_L	0.702	0.24
13_V	416_R	0.699	0.24
145_I	365_V	0.697	0.24
174_G	323_S	0.696	0.24
231_P	245_I	0.696	0.24
239_R	435_I	0.695	0.24
363_H	397_N	0.694	0.24
342_F	346_T	0.693	0.24
54_F	290_M	0.691	0.24
68_I	271_I	0.691	0.24
52_D	56_N	0.691	0.24
118_V	260_M	0.690	0.24
15_R	52_D	0.689	0.24
150_W	357_V	0.688	0.24
429_S	433_F	0.686	0.24
33_V	208_K	0.684	0.24
220_L	410_I	0.684	0.24
174_G	375_A	0.682	0.24
46_M	318_L	0.680	0.23
9_M	423_I	0.679	0.23
51_G	395_W	0.675	0.23
394_Q	398_M	0.675	0.23
135_D	368_G	0.674	0.23
209_P	427_L	0.673	0.23
41_Q	324_G	0.672	0.23
24_A	312_F	0.670	0.23
223_E	245_I	0.669	0.23
309_Q	313_Y	0.668	0.23
101_V	110_V	0.667	0.23
165_P	324_G	0.664	0.23
29_L	259_A	0.664	0.23
45_S	86_T	0.664	0.23
93_T	329_I	0.663	0.23
46_M	111_I	0.662	0.23
393_E	426_L	0.661	0.23
189_F	431_V	0.657	0.22
232_K	427_L	0.656	0.22
80_V	399_A	0.655	0.22
243_S	289_P	0.655	0.22
232_K	238_E	0.654	0.22
52_D	171_H	0.653	0.22
347_F	433_F	0.653	0.22
77_S	168_P	0.652	0.22
269_I	277_M	0.652	0.22
95_V	437_L	0.649	0.22
317_Q	365_V	0.648	0.22
235_P	239_R	0.648	0.22
82_S	232_K	0.645	0.22
103_F	223_E	0.643	0.22
202_T	205_M	0.643	0.22
176_I	335_N	0.643	0.22
16_W	44_I	0.641	0.22
61_G	437_L	0.641	0.22
99_M	434_V	0.640	0.22
111_I	418_I	0.640	0.22
185_G	244_R	0.640	0.22
29_L	83_L	0.639	0.22
107_V	189_F	0.638	0.22
159_P	310_F	0.636	0.22
286_H	405_L	0.634	0.21
138_L	393_E	0.634	0.21
10_T	24_A	0.633	0.21
337_A	340_D	0.632	0.21
198_M	428_F	0.631	0.21
143_A	286_H	0.631	0.21
324_G	409_A	0.629	0.21
248_L	427_L	0.628	0.21
95_V	203_R	0.626	0.21
81_K	126_E	0.624	0.21
175_L	210_S	0.624	0.21
47_V	125_R	0.624	0.21
113_W	432_I	0.623	0.21
15_R	236_P	0.622	0.21
378_L	437_L	0.622	0.21
405_L	413_L	0.622	0.21
368_G	398_M	0.621	0.21
367_Q	387_M	0.621	0.21
349_S	389_I	0.620	0.21
29_L	238_E	0.620	0.21
105_G	137_P	0.619	0.21
270_T	353_I	0.618	0.21
274_V	372_I	0.617	0.21
113_W	430_G	0.616	0.21
56_N	432_I	0.614	0.21
247_T	289_P	0.613	0.21
272_N	343_P	0.613	0.21
375_A	380_A	0.613	0.21
201_I	355_F	0.612	0.21
127_V	296_I	0.612	0.21
216_D	220_L	0.611	0.20
194_L	308_V	0.611	0.20
89_S	130_R	0.611	0.20
182_L	275_N	0.611	0.20
5_I	259_A	0.611	0.20
80_V	283_L	0.610	0.20
70_T	278_F	0.610	0.20
251_G	409_A	0.609	0.20
29_L	250_I	0.609	0.20
320_M	355_F	0.609	0.20
105_G	348_F	0.609	0.20
64_M	157_S	0.608	0.20
30_L	238_E	0.607	0.20
10_T	34_I	0.606	0.20
82_S	264_E	0.606	0.20
168_P	171_H	0.601	0.20
296_I	342_F	0.601	0.20
108_A	120_G	0.600	0.20
25_M	246_L	0.599	0.20
37_W	439_L	0.599	0.20
252_A	277_M	0.594	0.20
87_A	193_A	0.594	0.20
30_L	34_I	0.592	0.20
70_T	114_G	0.591	0.20
282_G	438_T	0.591	0.20
302_S	409_A	0.590	0.20
212_V	281_A	0.589	0.20
105_G	415_V	0.589	0.20
180_D	264_E	0.588	0.20
346_T	363_H	0.587	0.19
201_I	320_M	0.586	0.19
144_Y	149_T	0.586	0.19
354_N	408_L	0.585	0.19
6_S	304_A	0.585	0.19
403_W	419_M	0.585	0.19
59_A	314_A	0.584	0.19
72_H	299_A	0.583	0.19
158_M	305_G	0.583	0.19
212_V	235_P	0.583	0.19
193_A	210_S	0.582	0.19
46_M	197_V	0.580	0.19
338_N	409_A	0.580	0.19
274_V	412_G	0.580	0.19
57_L	360_G	0.579	0.19
188_I	427_L	0.578	0.19
4_R	308_V	0.578	0.19
69_V	116_G	0.578	0.19
82_S	107_V	0.577	0.19
97_G	330_T	0.577	0.19
38_L	379_G	0.576	0.19
280_I	386_V	0.574	0.19
252_A	276_L	0.574	0.19
274_V	374_A	0.574	0.19
395_W	429_S	0.574	0.19
202_T	237_S	0.574	0.19
70_T	270_T	0.573	0.19
33_V	232_K	0.572	0.19
65_A	303_T	0.571	0.19
208_K	212_V	0.570	0.19
192_V	196_V	0.569	0.19
91_A	207_P	0.569	0.19
151_G	310_F	0.569	0.19
54_F	164_T	0.568	0.19
408_L	413_L	0.564	0.19
181_T	406_P	0.563	0.19
404_A	411_A	0.563	0.19
49_M	52_D	0.563	0.19
23_F	288_T	0.563	0.19
391_Y	418_I	0.562	0.19
197_V	208_K	0.562	0.19
102_T	198_M	0.561	0.18
122_M	425_A	0.561	0.18
26_L	179_G	0.561	0.18
253_L	338_N	0.561	0.18
47_V	259_A	0.561	0.18
365_V	400_Q	0.560	0.18
165_P	171_H	0.560	0.18
142_C	349_S	0.560	0.18
84_L	415_V	0.559	0.18
150_W	157_S	0.559	0.18
163_A	174_G	0.559	0.18
62_M	307_L	0.558	0.18
42_T	294_R	0.558	0.18
16_W	240_L	0.557	0.18
68_I	113_W	0.557	0.18
146_G	360_G	0.557	0.18
252_A	281_A	0.556	0.18
333_F	371_V	0.556	0.18
216_D	219_L	0.551	0.18
62_M	66_L	0.551	0.18
221_M	231_P	0.550	0.18
84_L	119_V	0.550	0.18
62_M	114_G	0.549	0.18
183_F	380_A	0.549	0.18
67_I	278_F	0.548	0.18
273_T	350_S	0.545	0.18
304_A	355_F	0.545	0.18
230_L	439_L	0.544	0.18
210_S	340_D	0.544	0.18
22_I	258_L	0.543	0.18
241_E	411_A	0.543	0.18
105_G	108_A	0.543	0.18
251_G	329_I	0.542	0.18
337_A	385_S	0.542	0.18
24_A	106_S	0.542	0.18
23_F	290_M	0.540	0.18
235_P	341_T	0.540	0.18
62_M	409_A	0.540	0.18
386_V	419_M	0.538	0.18
42_T	439_L	0.537	0.18
98_V	102_T	0.537	0.18
162_A	174_G	0.537	0.18
318_L	322_H	0.536	0.18
357_V	366_I	0.536	0.18
302_S	310_F	0.535	0.18
352_L	427_L	0.535	0.18
48_K	264_E	0.535	0.18
170_E	246_L	0.534	0.17
121_A	157_S	0.534	0.17
78_A	335_N	0.534	0.17
26_L	33_V	0.533	0.17
147_F	417_D	0.532	0.17
23_F	134_S	0.532	0.17
165_P	175_L	0.532	0.17
83_L	303_T	0.531	0.17
138_L	205_M	0.528	0.17
350_S	397_N	0.528	0.17
423_I	427_L	0.528	0.17
201_I	428_F	0.526	0.17
108_A	422_C	0.526	0.17
270_T	293_M	0.526	0.17
362_G	366_I	0.525	0.17
124_A	146_G	0.524	0.17
45_S	279_M	0.524	0.17
34_I	38_L	0.524	0.17
146_G	284_L	0.523	0.17
282_G	368_G	0.523	0.17
68_I	71_G	0.523	0.17
399_A	413_L	0.522	0.17
334_I	352_L	0.522	0.17
31_T	300_A	0.521	0.17
110_V	156_G	0.521	0.17
50_W	315_G	0.520	0.17
41_Q	46_M	0.520	0.17
122_M	126_E	0.519	0.17
23_F	321_E	0.519	0.17
222_E	231_P	0.519	0.17
36_L	39_T	0.518	0.17
161_L	389_I	0.518	0.17
140_I	275_N	0.518	0.17
122_M	128_A	0.518	0.17
169_V	240_L	0.518	0.17
82_S	233_D	0.517	0.17
30_L	188_I	0.517	0.17
144_Y	403_W	0.516	0.17
5_I	323_S	0.515	0.17
347_F	397_N	0.515	0.17
30_L	99_M	0.515	0.17
163_A	175_L	0.515	0.17
337_A	381_D	0.515	0.17
300_A	305_G	0.513	0.17
101_V	304_A	0.510	0.17
255_I	383_G	0.508	0.17
21_L	49_M	0.508	0.17
230_L	233_D	0.507	0.17
85_R	298_A	0.506	0.16
150_W	415_V	0.506	0.16
388_A	392_G	0.506	0.16
196_V	221_M	0.505	0.16
9_M	424_T	0.505	0.16
106_S	136_Y	0.504	0.16
106_S	372_I	0.503	0.16
45_S	48_K	0.502	0.16
263_S	329_I	0.501	0.16
256_A	259_A	0.501	0.16
259_A	352_L	0.501	0.16
64_M	71_G	0.501	0.16
189_F	435_I	0.501	0.16
61_G	66_L	0.500	0.16
370_F	396_M	0.500	0.16

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r0cA	3	0.9068	100	0.783	Contact Map
4r1iA	2	0.95	100	0.827	Contact Map
4f35D	2	0.8705	99.7	0.896	Contact Map
4djkA	2	0.4364	70.7	0.976	Contact Map
3giaA	1	0.4318	44.8	0.98	Contact Map
4eneA	2	0.3886	30.9	0.981	Contact Map
4tphA	2	0.3886	28.4	0.982	Contact Map
2jlnA	1	0.4386	19	0.983	Contact Map
2mmuA	1	0.0977	17.3	0.984	Contact Map
3zuxA	1	0.275	13.5	0.984	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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