GREMLIN Database
MDTC - Multidrug resistance protein MdtC
UniProt: P76399 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG14058
Length: 1025 (998)
Sequences: 15840 (10118)
Seq/√Len: 320.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
938_T941_E4.1741.00
239_A242_Q4.1031.00
303_K306_E3.9841.00
242_Q257_G3.9081.00
305_P308_Q3.8871.00
64_A89_T3.7571.00
707_V785_Q3.7021.00
49_A89_T3.5351.00
518_S999_Y3.4541.00
894_A988_G3.3631.00
579_L607_G3.3601.00
298_D328_R3.2161.00
419_K422_Q3.1971.00
243_P257_G3.1401.00
520_K944_F3.1131.00
150_S153_E3.0831.00
5_A9_Y3.0821.00
574_A577_G3.0531.00
418_M426_Q3.0381.00
144_L158_A2.8681.00
669_D672_A2.8431.00
672_A675_E2.8281.00
189_L204_V2.8261.00
709_D783_K2.8111.00
77_V93_L2.7911.00
737_S748_V2.7881.00
169_I299_S2.7301.00
276_N594_N2.7161.00
165_T303_K2.7161.00
708_Y713_M2.7111.00
64_A84_S2.6991.00
274_M583_M2.6811.00
683_K827_Q2.6361.00
713_M723_A2.6281.00
719_D722_A2.6181.00
301_R322_D2.5831.00
60_A800_A2.5721.00
194_L199_V2.5621.00
242_Q262_V2.5511.00
683_K686_T2.5491.00
339_I343_A2.5141.00
238_A242_Q2.4861.00
876_H929_L2.4781.00
78_S94_Q2.4731.00
622_T625_Q2.4651.00
256_L262_V2.4481.00
576_R580_Q2.4331.00
308_Q316_D2.4061.00
154_L315_I2.3981.00
675_E679_K2.3891.00
190_N193_A2.3851.00
372_G473_I2.3791.00
516_G948_L2.3761.00
681_R685_A2.3631.00
246_I259_V2.3461.00
78_S96_D2.3291.00
937_L945_Q2.3161.00
812_K820_A2.2941.00
295_Q299_S2.2671.00
709_D712_T2.2511.00
157_F315_I2.2491.00
376_A469_V2.2261.00
147_D316_D2.2211.00
676_W834_V2.2171.00
524_N940_Q2.2071.00
761_S764_E2.1891.00
684_L821_I2.1831.00
898_F984_I2.1731.00
188_G263_T2.1571.00
205_R750_M2.1511.00
187_V208_V2.1461.00
813_S816_D2.1251.00
707_V783_K2.1201.00
413_H418_M2.1111.00
189_L201_L2.1041.00
589_D629_R2.0801.00
591_A621_E2.0661.00
183_P264_D2.0611.00
931_A937_L2.0571.00
681_R695_S2.0481.00
588_D633_K2.0471.00
943_I1006_L2.0421.00
241_Y256_L2.0381.00
705_N787_A2.0201.00
764_E779_S2.0131.00
562_G611_I2.0131.00
932_Q1005_Y2.0111.00
413_H430_E2.0081.00
708_Y723_A2.0071.00
931_A934_H2.0041.00
680_I825_M1.9981.00
336_Q340_I1.9861.00
422_Q426_Q1.9551.00
687_L820_A1.9551.00
566_A570_I1.9451.00
969_V987_V1.9431.00
147_D278_K1.9401.00
690_L693_V1.9391.00
510_A513_Q1.9331.00
777_P780_Y1.9291.00
692_D807_N1.9241.00
237_T240_E1.9211.00
593_D614_K1.9191.00
706_L782_A1.8901.00
299_S302_A1.8891.00
67_L71_L1.8871.00
57_E61_S1.8851.00
678_P681_R1.8821.00
586_I630_L1.8811.00
621_E629_R1.8761.00
412_R416_A1.8501.00
515_Y947_C1.8411.00
9_Y421_L1.8401.00
665_L680_I1.8271.00
274_M576_R1.8261.00
67_L91_I1.8211.00
542_W545_I1.8201.00
59_M63_V1.8191.00
510_A514_G1.8181.00
931_A945_Q1.8161.00
822_D846_Q1.8121.00
521_W525_H1.8111.00
239_A243_P1.8051.00
718_I768_V1.8041.00
525_H528_L1.8001.00
443_V472_G1.7991.00
940_Q1006_L1.7981.00
535_G539_L1.7941.00
261_T753_D1.7901.00
12_V868_G1.7901.00
759_D762_A1.7891.00
581_D584_K1.7861.00
676_W679_K1.7831.00
26_I30_R1.7751.00
589_D633_K1.7721.00
205_R209_S1.7721.00
162_L307_L1.7681.00
409_N430_E1.7641.00
681_R693_V1.7371.00
690_L817_A1.7371.00
365_S477_V1.7371.00
585_I633_K1.7361.00
191_P756_Y1.7271.00
31_M378_Y1.7161.00
526_T1006_L1.7121.00
677_E802_S1.7101.00
149_Y314_A1.7081.00
145_T318_Q1.7061.00
5_A425_L1.7051.00
71_L93_L1.7031.00
516_G520_K1.7021.00
236_K240_E1.6961.00
900_A984_I1.6941.00
184_A749_V1.6931.00
194_L259_V1.6871.00
820_A823_R1.6861.00
712_T715_R1.6851.00
705_N785_Q1.6831.00
295_Q298_D1.6821.00
584_K588_D1.6711.00
580_Q584_K1.6681.00
659_A806_F1.6681.00
298_D302_A1.6671.00
521_W524_N1.6661.00
541_I545_I1.6651.00
10_R872_E1.6641.00
200_S203_D1.6521.00
93_L108_V1.6471.00
674_R678_P1.6451.00
629_R633_K1.6441.00
332_E336_Q1.6361.00
579_L597_G1.6291.00
530_G534_L1.6281.00
819_A822_D1.6251.00
585_I636_K1.6211.00
929_L933_R1.6051.00
301_R319_I1.6051.00
116_Q126_R1.6021.00
190_N261_T1.5991.00
64_A82_S1.5991.00
930_E934_H1.5921.00
560_L611_I1.5891.00
824_A827_Q1.5811.00
71_L91_I1.5811.00
22_T371_I1.5811.00
753_D756_Y1.5691.00
820_A824_A1.5671.00
182_L267_Q1.5661.00
143_T275_T1.5661.00
718_I781_F1.5651.00
67_L115_A1.5641.00
243_P255_R1.5611.00
199_V203_D1.5551.00
76_G99_R1.5551.00
679_K682_K1.5511.00
628_D632_V1.5481.00
380_C469_V1.5481.00
382_F465_V1.5421.00
518_S521_W1.5381.00
689_E820_A1.5361.00
575_M607_G1.5341.00
28_G375_A1.5331.00
564_I579_L1.5271.00
713_M718_I1.5271.00
683_K824_A1.5241.00
212_N737_S1.5211.00
564_I582_F1.5161.00
100_D103_G1.5161.00
206_T210_N1.5131.00
633_K636_K1.5101.00
301_R305_P1.5101.00
584_K587_R1.5081.00
549_K815_S1.5051.00
631_R692_D1.5031.00
412_R949_L1.5021.00
202_D206_T1.4981.00
812_K816_D1.4941.00
769_I775_A1.4921.00
472_G476_L1.4921.00
235_L241_Y1.4881.00
723_A781_F1.4871.00
410_I486_C1.4841.00
582_F634_L1.4751.00
682_K686_T1.4731.00
409_N412_R1.4711.00
465_V469_V1.4681.00
189_L194_L1.4681.00
208_V244_L1.4661.00
514_G517_K1.4641.00
413_H416_A1.4631.00
822_D826_T1.4611.00
84_S89_T1.4601.00
706_L784_W1.4571.00
736_I750_M1.4491.00
291_A296_T1.4441.00
586_I592_V1.4401.00
566_A578_K1.4391.00
80_M93_L1.4371.00
530_G1007_F1.4371.00
883_T921_A1.4311.00
735_Q747_K1.4311.00
193_A197_Q1.4291.00
816_D819_A1.4291.00
542_W546_S1.4281.00
672_A676_W1.4271.00
570_I574_A1.4261.00
585_I589_D1.4241.00
49_A123_M1.4241.00
864_Y877_P1.4211.00
172_V285_I1.4201.00
206_T209_S1.4201.00
940_Q944_F1.4131.00
235_L244_L1.4081.00
203_D206_T1.4071.00
203_D769_I1.3931.00
49_A67_L1.3881.00
819_A823_R1.3861.00
373_T470_A1.3851.00
679_K683_K1.3821.00
333_E336_Q1.3801.00
193_A196_N1.3771.00
49_A64_A1.3761.00
682_K685_A1.3751.00
844_V847_E1.3741.00
514_G518_S1.3691.00
537_I541_I1.3661.00
577_G581_D1.3651.00
99_R104_A1.3641.00
932_Q1009_D1.3591.00
591_A626_I1.3591.00
229_I731_F1.3571.00
770_N774_K1.3541.00
322_D325_P1.3511.00
299_S303_K1.3501.00
599_T607_G1.3471.00
580_Q583_M1.3451.00
665_L673_L1.3441.00
255_R258_D1.3421.00
163_A167_S1.3421.00
47_V71_L1.3401.00
538_A542_W1.3401.00
962_L991_V1.3391.00
583_M587_R1.3381.00
210_N714_A1.3381.00
36_P557_T1.3351.00
145_T316_D1.3351.00
45_I108_V1.3351.00
564_I607_G1.3291.00
272_A576_R1.3291.00
526_T1010_R1.3241.00
170_D299_S1.3241.00
343_A347_L1.3211.00
16_L865_I1.3211.00
406_V428_T1.3161.00
560_L627_I1.3151.00
79_E797_G1.3101.00
68_E795_H1.3101.00
144_L162_L1.3071.00
539_L543_L1.3051.00
63_V123_M1.3051.00
962_L987_V1.3041.00
249_N252_G1.3031.00
768_V781_F1.3001.00
24_C375_A1.2981.00
311_I317_L1.2961.00
21_I372_G1.2961.00
376_A380_C1.2961.00
531_V535_G1.2911.00
690_L806_F1.2911.00
677_E695_S1.2911.00
346_I363_A1.2891.00
516_G945_Q1.2871.00
203_D247_H1.2851.00
59_M84_S1.2801.00
65_T795_H1.2791.00
941_E945_Q1.2791.00
587_R595_V1.2771.00
55_S58_T1.2751.00
200_S769_I1.2751.00
402_D919_K1.2741.00
531_V538_A1.2731.00
589_D626_I1.2731.00
273_G282_L1.2721.00
79_E94_Q1.2721.00
595_V609_M1.2701.00
592_V611_I1.2701.00
71_L108_V1.2681.00
156_D746_Y1.2661.00
188_G261_T1.2661.00
76_G96_D1.2621.00
664_T796_Q1.2621.00
823_R827_Q1.2591.00
667_S834_V1.2591.00
5_A429_R1.2571.00
240_E243_P1.2571.00
368_V481_L1.2551.00
165_T310_T1.2551.00
937_L941_E1.2541.00
762_A765_K1.2531.00
426_Q429_R1.2521.00
29_F335_E1.2521.00
194_L204_V1.2511.00
157_F161_Q1.2481.00
15_I874_Y1.2481.00
8_I425_L1.2481.00
932_Q939_P1.2451.00
113_N116_Q1.2451.00
45_I105_A1.2421.00
825_M836_G1.2401.00
550_T901_P1.2371.00
245_I253_A1.2361.00
591_A614_K1.2351.00
522_V1003_V1.2281.00
516_G944_F1.2231.00
687_L824_A1.2221.00
28_G378_Y1.2191.00
560_L630_L1.2181.00
593_D612_T1.2181.00
242_Q261_T1.2161.00
928_A943_I1.2151.00
304_L317_L1.2141.00
302_A306_E1.2111.00
298_D301_R1.2111.00
60_A795_H1.2111.00
689_E812_K1.2061.00
917_V993_S1.2041.00
6_L13_A1.2041.00
305_P309_E1.2031.00
49_A127_P1.2011.00
303_K307_L1.2011.00
581_D585_I1.1981.00
683_K828_L1.1961.00
149_Y153_E1.1931.00
413_H426_Q1.1911.00
628_D631_R1.1851.00
703_E789_A1.1851.00
895_L906_A1.1841.00
517_K520_K1.1841.00
891_A910_I1.1811.00
939_P943_I1.1791.00
219_A226_R1.1791.00
513_Q517_K1.1761.00
666_L837_S1.1731.00
172_V296_T1.1671.00
59_M89_T1.1651.00
718_I771_N1.1631.00
566_A575_M1.1621.00
578_K581_D1.1611.00
843_Q847_E1.1611.00
71_L80_M1.1601.00
666_L801_A1.1601.00
47_V93_L1.1581.00
149_Y315_I1.1581.00
585_I588_D1.1571.00
721_Q725_S1.1541.00
243_P711_D1.1521.00
799_S835_R1.1511.00
166_I175_V1.1511.00
546_S896_E1.1501.00
900_A980_Q1.1501.00
955_M959_L1.1461.00
8_I484_M1.1461.00
517_K521_W1.1461.00
945_Q948_L1.1451.00
579_L599_T1.1431.00
67_L112_I1.1431.00
245_I255_R1.1421.00
515_Y519_L1.1411.00
197_Q254_V1.1391.00
966_L987_V1.1361.00
302_A305_P1.1331.00
738_T747_K1.1321.00
621_E626_I1.1311.00
680_I804_I1.1311.00
678_P682_K1.1261.00
70_S115_A1.1221.00
217_Q231_T1.1221.00
111_A114_A1.1211.00
140_M300_I1.1201.00
684_L690_L1.1171.00
418_M422_Q1.1171.00
839_A843_Q1.1151.00
687_L823_R1.1151.00
581_D637_E1.1151.00
850_N853_V1.1141.00
665_L676_W1.1121.00
439_S475_L1.1121.00
165_T307_L1.1121.00
60_A793_V1.1101.00
207_A244_L1.1091.00
142_L317_L1.1081.00
577_G580_Q1.1081.00
328_R332_E1.1071.00
440_L866_V1.1071.00
409_N927_F1.1051.00
306_E309_E1.1041.00
18_S481_L1.1021.00
929_L932_Q1.1021.00
78_S847_E1.1011.00
142_L319_I1.0971.00
729_N734_R1.0971.00
373_T469_V1.0951.00
796_Q839_A1.0941.00
728_N734_R1.0931.00
585_I637_E1.0901.00
538_A541_I1.0891.00
22_T26_I1.0881.00
625_Q629_R1.0871.00
297_V324_S1.0861.00
767_F775_A1.0851.00
421_L425_L1.0851.00
292_N295_Q1.0851.00
13_A869_I1.0831.00
77_V80_M1.0811.00
382_F388_S1.0771.00
519_L523_L1.0751.00
927_F931_A1.0711.00
333_E979_R1.0671.00
823_R826_T1.0671.00
151_Q181_S1.0671.00
7_F14_T1.0671.00
808_L817_A1.0651.00
710_R720_V1.0641.00
528_L531_V1.0641.00
144_L317_L1.0621.00
935_G945_Q1.0621.00
550_T903_S1.0621.00
51_L54_A1.0611.00
624_Q628_D1.0601.00
3_F7_F1.0601.00
364_V485_M1.0581.00
671_A674_R1.0581.00
535_G538_A1.0571.00
109_Q113_N1.0561.00
175_V283_L1.0551.00
581_D639_G1.0541.00
527_R1007_F1.0511.00
959_L963_F1.0501.00
672_A834_V1.0501.00
81_T94_Q1.0501.00
155_Y180_S1.0471.00
145_T278_K1.0471.00
486_C490_L1.0451.00
202_D722_A1.0411.00
186_R751_E1.0411.00
893_L897_L1.0401.00
409_N413_H1.0391.00
770_N773_G1.0391.00
184_A267_Q1.0371.00
128_T131_K1.0361.00
308_Q317_L1.0361.00
930_E933_R1.0361.00
534_L538_A1.0361.00
70_S114_A1.0341.00
80_M798_L1.0331.00
894_A984_I1.0321.00
188_G753_D1.0321.00
667_S672_A1.0291.00
509_V513_Q1.0291.00
230_Q703_E1.0271.00
522_V529_V1.0261.00
83_S92_I1.0241.00
685_A693_V1.0241.00
564_I642_L1.0231.00
583_M597_G1.0231.00
204_V259_V1.0211.00
765_K779_S1.0201.00
422_Q425_L1.0201.00
524_N527_R1.0191.00
676_W830_V1.0181.00
621_E625_Q1.0181.00
632_V635_A1.0171.00
48_S88_S1.0161.00
68_E82_S1.0161.00
256_L260_A1.0141.00
255_R711_D1.0121.00
821_I838_F1.0101.00
82_S795_H1.0081.00
629_R632_V1.0061.00
522_V999_Y1.0061.00
662_Q803_T1.0051.00
99_R107_D1.0041.00
751_E757_T1.0021.00
365_S482_T1.0011.00
562_G586_I1.0011.00
586_I609_M1.0011.00
630_L634_L1.0001.00
625_Q628_D0.9981.00
668_D834_V0.9981.00
411_A415_E0.9951.00
438_M475_L0.9951.00
143_T280_A0.9941.00
103_G107_D0.9941.00
217_Q727_L0.9931.00
437_S866_V0.9921.00
274_M580_Q0.9911.00
560_L613_L0.9891.00
927_F949_L0.9851.00
432_G436_L0.9851.00
47_V67_L0.9851.00
82_S91_I0.9831.00
680_I824_A0.9821.00
962_L990_L0.9821.00
376_A473_I0.9821.00
817_A820_A0.9811.00
414_L420_P0.9801.00
50_S88_S0.9801.00
543_L893_L0.9791.00
554_E624_Q0.9791.00
963_F966_L0.9791.00
155_Y159_S0.9791.00
147_D314_A0.9781.00
246_I254_V0.9781.00
365_S403_A0.9771.00
934_H937_L0.9761.00
582_F609_M0.9751.00
631_R635_A0.9751.00
958_T994_Q0.9741.00
663_Y684_L0.9741.00
945_Q949_L0.9731.00
589_D630_L0.9721.00
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405_V964_G0.5130.93
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169_I172_V0.5120.93
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377_M392_L0.5060.93
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23_L861_A0.5050.93
882_S1001_T0.5050.93
923_M961_A0.5050.93
369_S373_T0.5050.93
443_V447_L0.5050.93
695_S802_S0.5040.93
716_L780_Y0.5030.93
354_R359_T0.5030.93
661_Y690_L0.5030.93
203_D249_N0.5030.93
837_S843_Q0.5020.93
23_L27_L0.5020.93
345_V359_T0.5020.93
66_P118_L0.5020.93
415_E493_S0.5010.93
678_P695_S0.5010.93
71_L74_I0.5010.93
376_A379_L0.5010.93
18_S480_T0.5000.93
583_M586_I0.5000.93
59_M64_A0.5000.93
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4k0jA 3 0.9366 100 0.201 Contact Map
4mt1A 3 0.9649 100 0.272 Contact Map
3ne5A 3 0.9659 100 0.272 Contact Map
3w9iA 3 0.9805 100 0.279 Contact Map
4dx5A 3 0.9893 100 0.291 Contact Map
3aqpA 1 0.6849 100 0.718 Contact Map
4r86A 1 0.28 100 0.746 Contact Map
2ew9A 1 0.1444 69.8 0.983 Contact Map
4q2lA 1 0.0624 63.4 0.984 Contact Map
4n8nA 1 0.0976 60.2 0.984 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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