ADRB - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

ADRB - Putative cyclic-di-GMP phosphodiesterase AdrB

UniProt:	P76261	Sequences: MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13516
Length:	532 (434)
Sequences:	15952 (12662)
Seq/√Len:	607.8

ECOLI - ADRB YEGE DOSP GMR YLIE YFGF YFEA YHJK CSRD YLAB YCGG YJCC RTN BLUF YAHA
BACSU - YKOW

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
300_V	507_F	4.300	1.00
292_A	493_L	3.976	1.00
126_E	130_P	3.887	1.00
338_A	379_S	3.499	1.00
333_T	363_H	3.467	1.00
441_K	445_A	3.356	1.00
334_R	372_D	3.214	1.00
499_A	502_M	3.149	1.00
374_N	410_K	3.124	1.00
408_H	435_D	3.057	1.00
286_C	343_Q	2.957	1.00
283_E	307_N	2.916	1.00
265_Y	318_V	2.882	1.00
387_I	436_V	2.695	1.00
291_N	294_S	2.624	1.00
479_Q	483_K	2.574	1.00
253_L	256_G	2.544	1.00
272_E	308_N	2.528	1.00
348_P	385_Q	2.507	1.00
484_Y	488_H	2.494	1.00
345_H	349_M	2.493	1.00
465_Q	491_H	2.491	1.00
256_G	259_A	2.438	1.00
255_V	259_A	2.311	1.00
308_N	312_G	2.304	1.00
476_V	493_L	2.287	1.00
323_A	332_L	2.197	1.00
430_E	453_N	2.173	1.00
304_L	336_V	2.151	1.00
165_E	228_V	2.150	1.00
415_A	436_V	2.129	1.00
343_Q	504_L	2.106	1.00
137_T	141_A	2.092	1.00
482_A	498_Y	2.080	1.00
237_A	240_Y	2.070	1.00
482_A	493_L	2.011	1.00
343_Q	347_F	1.996	1.00
339_E	342_R	1.992	1.00
335_Y	339_E	1.968	1.00
163_V	232_G	1.967	1.00
308_N	311_Q	1.964	1.00
339_E	343_Q	1.942	1.00
146_S	238_W	1.916	1.00
165_E	204_D	1.884	1.00
285_F	503_P	1.871	1.00
266_R	325_E	1.870	1.00
341_I	376_Y	1.869	1.00
284_L	336_V	1.848	1.00
275_L	279_Q	1.841	1.00
344_R	381_H	1.840	1.00
290_L	498_Y	1.820	1.00
253_L	259_A	1.817	1.00
117_N	121_V	1.814	1.00
280_H	339_E	1.804	1.00
478_T	481_Q	1.800	1.00
307_N	313_W	1.779	1.00
404_A	414_L	1.756	1.00
141_A	145_G	1.756	1.00
289_L	492_I	1.751	1.00
283_E	313_W	1.741	1.00
359_V	369_L	1.731	1.00
186_S	189_L	1.730	1.00
454_S	484_Y	1.719	1.00
176_L	184_I	1.716	1.00
458_D	466_R	1.709	1.00
289_L	436_V	1.706	1.00
354_H	413_K	1.697	1.00
458_D	488_H	1.694	1.00
170_D	227_N	1.682	1.00
503_P	506_D	1.679	1.00
382_P	385_Q	1.678	1.00
347_F	504_L	1.676	1.00
448_G	454_S	1.669	1.00
496_Y	501_P	1.618	1.00
281_E	308_N	1.616	1.00
282_F	304_L	1.600	1.00
479_Q	497_L	1.595	1.00
461_I	488_H	1.593	1.00
338_A	376_Y	1.589	1.00
285_F	313_W	1.575	1.00
413_K	435_D	1.569	1.00
448_G	480_E	1.562	1.00
470_E	491_H	1.551	1.00
190_T	215_Y	1.546	1.00
284_L	335_Y	1.545	1.00
482_A	486_R	1.542	1.00
190_T	193_K	1.537	1.00
289_L	387_I	1.536	1.00
377_W	412_V	1.532	1.00
235_A	244_Q	1.529	1.00
482_A	497_L	1.519	1.00
416_I	434_P	1.518	1.00
461_I	490_V	1.512	1.00
436_V	472_V	1.500	1.00
387_I	415_A	1.495	1.00
350_S	508_P	1.474	1.00
430_E	446_A	1.473	1.00
348_P	382_P	1.470	1.00
186_S	218_S	1.467	1.00
359_V	388_L	1.457	1.00
193_K	196_L	1.441	1.00
289_L	299_G	1.437	1.00
502_M	510_W	1.435	1.00
470_E	492_I	1.410	1.00
458_D	462_A	1.398	1.00
216_Q	221_R	1.374	1.00
354_H	387_I	1.374	1.00
123_I	127_L	1.369	1.00
437_L	464_G	1.363	1.00
375_Q	379_S	1.363	1.00
298_I	492_I	1.361	1.00
145_G	148_V	1.358	1.00
126_E	135_R	1.351	1.00
297_C	510_W	1.346	1.00
254_L	259_A	1.345	1.00
309_P	312_G	1.344	1.00
448_G	484_Y	1.338	1.00
109_C	113_F	1.329	1.00
304_L	335_Y	1.329	1.00
272_E	311_Q	1.313	1.00
281_E	306_W	1.309	1.00
374_N	406_E	1.304	1.00
253_L	257_Y	1.303	1.00
275_L	281_E	1.300	1.00
204_D	230_G	1.295	1.00
255_V	258_I	1.293	1.00
311_Q	318_V	1.292	1.00
344_R	355_V	1.290	1.00
117_N	120_V	1.290	1.00
436_V	470_E	1.282	1.00
434_P	469_I	1.280	1.00
506_D	509_K	1.275	1.00
447_I	484_Y	1.273	1.00
205_S	209_P	1.268	1.00
441_K	475_G	1.268	1.00
125_A	129_A	1.261	1.00
347_F	508_P	1.259	1.00
473_A	490_V	1.253	1.00
191_V	211_D	1.249	1.00
118_V	121_V	1.249	1.00
304_L	332_L	1.245	1.00
169_I	191_V	1.240	1.00
340_T	355_V	1.231	1.00
346_V	350_S	1.231	1.00
284_L	340_T	1.222	1.00
110_S	113_F	1.220	1.00
167_I	226_I	1.214	1.00
483_K	487_R	1.205	1.00
86_L	90_A	1.203	1.00
187_A	224_F	1.201	1.00
130_P	141_A	1.197	1.00
464_G	471_L	1.193	1.00
174_A	270_S	1.193	1.00
190_T	194_R	1.191	1.00
361_P	393_R	1.182	1.00
211_D	226_I	1.181	1.00
254_L	257_Y	1.167	1.00
269_F	322_I	1.167	1.00
338_A	342_R	1.159	1.00
123_I	126_E	1.156	1.00
292_A	482_A	1.154	1.00
483_K	486_R	1.149	1.00
147_P	238_W	1.143	1.00
265_Y	311_Q	1.142	1.00
373_L	407_L	1.137	1.00
499_A	510_W	1.133	1.00
231_P	244_Q	1.124	1.00
246_P	250_L	1.122	1.00
450_D	453_N	1.122	1.00
113_F	117_N	1.120	1.00
377_W	383_I	1.116	1.00
107_L	110_S	1.115	1.00
372_D	376_Y	1.114	1.00
282_F	335_Y	1.111	1.00
317_D	441_K	1.110	1.00
244_Q	260_W	1.109	1.00
405_R	409_R	1.109	1.00
344_R	348_P	1.106	1.00
86_L	92_K	1.104	1.00
365_R	397_L	1.099	1.00
343_Q	346_V	1.099	1.00
493_L	498_Y	1.098	1.00
308_N	314_I	1.096	1.00
352_Q	385_Q	1.091	1.00
103_Q	106_T	1.091	1.00
291_N	296_Q	1.089	1.00
233_A	241_L	1.077	1.00
216_Q	219_S	1.077	1.00
171_L	174_A	1.074	1.00
116_R	119_P	1.073	1.00
200_N	206_L	1.072	1.00
149_L	162_G	1.070	1.00
129_A	140_R	1.065	1.00
401_Y	405_R	1.063	1.00
447_I	457_T	1.062	1.00
401_Y	431_T	1.059	1.00
260_W	264_A	1.059	1.00
289_L	356_G	1.059	1.00
186_S	190_T	1.052	1.00
166_M	249_V	1.051	1.00
311_Q	314_I	1.050	1.00
168_N	250_L	1.048	1.00
502_M	506_D	1.046	1.00
330_V	366_R	1.046	1.00
240_Y	244_Q	1.045	1.00
194_R	215_Y	1.045	1.00
387_I	413_K	1.044	1.00
373_L	388_L	1.036	1.00
210_E	213_E	1.034	1.00
436_V	492_I	1.033	1.00
281_E	309_P	1.032	1.00
211_D	215_Y	1.031	1.00
326_H	330_V	1.026	1.00
289_L	354_H	1.025	1.00
173_T	250_L	1.024	1.00
168_N	176_L	1.023	1.00
272_E	310_R	1.020	1.00
370_I	403_I	1.018	1.00
459_I	466_R	1.017	1.00
182_P	239_H	1.017	1.00
374_N	378_F	1.016	1.00
370_I	374_N	1.012	1.00
181_L	246_P	1.011	1.00
121_V	125_A	1.011	1.00
341_I	386_L	1.010	1.00
328_L	331_P	1.008	1.00
254_L	258_I	1.007	1.00
273_I	323_A	1.003	1.00
479_Q	482_A	1.001	1.00
114_G	117_N	1.000	1.00
399_V	432_L	0.997	1.00
171_L	270_S	0.991	1.00
342_R	346_V	0.990	1.00
376_Y	379_S	0.989	1.00
283_E	503_P	0.988	1.00
155_A	200_N	0.987	1.00
289_L	472_V	0.987	1.00
295_Q	486_R	0.986	1.00
356_G	387_I	0.984	1.00
345_H	348_P	0.982	1.00
108_Y	111_S	0.979	1.00
268_S	272_E	0.977	1.00
141_A	144_K	0.976	1.00
147_P	151_Q	0.974	1.00
324_E	329_I	0.969	1.00
208_Q	228_V	0.968	1.00
143_I	239_H	0.968	1.00
299_G	354_H	0.965	1.00
176_L	185_S	0.965	1.00
169_I	226_I	0.963	1.00
290_L	510_W	0.962	1.00
162_G	233_A	0.960	1.00
320_I	329_I	0.949	1.00
371_K	406_E	0.946	1.00
129_A	144_K	0.943	1.00
109_C	115_Y	0.943	1.00
445_A	481_Q	0.942	1.00
343_Q	508_P	0.940	1.00
337_M	376_Y	0.937	1.00
89_Q	92_K	0.935	1.00
145_G	149_L	0.935	1.00
136_L	192_D	0.934	1.00
345_H	380_A	0.934	1.00
203_V	206_L	0.933	1.00
183_Q	220_Q	0.931	1.00
301_E	358_N	0.930	1.00
448_G	478_T	0.930	1.00
448_G	481_Q	0.930	1.00
82_A	85_P	0.927	1.00
331_P	334_R	0.926	1.00
119_P	123_I	0.926	1.00
200_N	203_V	0.924	1.00
284_L	304_L	0.921	1.00
300_V	353_F	0.920	1.00
278_A	331_P	0.906	1.00
291_N	298_I	0.905	1.00
472_V	492_I	0.904	1.00
253_L	258_I	0.903	1.00
217_V	222_F	0.902	1.00
275_L	278_A	0.902	1.00
280_H	338_A	0.901	1.00
316_P	319_F	0.899	1.00
270_S	274_N	0.898	1.00
504_L	508_P	0.897	1.00
172_L	188_S	0.897	1.00
276_G	282_F	0.896	1.00
187_A	215_Y	0.893	1.00
132_P	140_R	0.893	1.00
221_R	275_L	0.893	1.00
370_I	406_E	0.893	1.00
291_N	491_H	0.884	1.00
476_V	485_L	0.882	1.00
273_I	282_F	0.877	1.00
293_R	491_H	0.874	1.00
170_D	225_T	0.873	1.00
396_L	428_W	0.873	1.00
388_L	412_V	0.872	1.00
230_G	254_L	0.869	1.00
340_T	357_I	0.867	1.00
369_L	373_L	0.861	1.00
209_P	212_N	0.860	1.00
461_I	471_L	0.859	1.00
113_F	118_V	0.857	1.00
93_L	98_S	0.853	1.00
204_D	208_Q	0.853	1.00
198_Y	206_L	0.852	1.00
183_Q	186_S	0.848	1.00
194_R	214_N	0.847	1.00
276_G	281_E	0.846	1.00
406_E	409_R	0.841	1.00
108_Y	113_F	0.840	1.00
177_L	250_L	0.840	1.00
122_D	125_A	0.839	1.00
368_V	372_D	0.839	1.00
172_L	176_L	0.839	1.00
293_R	486_R	0.839	1.00
403_I	406_E	0.839	1.00
205_S	208_Q	0.838	1.00
240_Y	243_T	0.836	1.00
386_L	412_V	0.836	1.00
189_L	193_K	0.835	1.00
354_H	385_Q	0.832	1.00
455_T	466_R	0.831	1.00
87_R	92_K	0.827	1.00
198_Y	210_E	0.824	1.00
173_T	177_L	0.823	1.00
401_Y	433_R	0.821	1.00
389_E	438_K	0.820	1.00
144_K	148_V	0.818	1.00
454_S	458_D	0.818	1.00
142_L	146_S	0.818	1.00
198_Y	207_P	0.818	1.00
462_A	466_R	0.817	1.00
179_P	220_Q	0.816	1.00
93_L	96_V	0.816	1.00
461_I	465_Q	0.813	1.00
341_I	381_H	0.811	1.00
168_N	172_L	0.810	1.00
413_K	470_E	0.809	1.00
402_R	406_E	0.808	1.00
260_W	263_T	0.806	1.00
181_L	250_L	0.804	1.00
326_H	329_I	0.803	1.00
124_L	127_L	0.800	1.00
323_A	329_I	0.798	1.00
334_R	338_A	0.797	1.00
280_H	335_Y	0.795	1.00
371_K	375_Q	0.794	1.00
465_Q	471_L	0.793	1.00
290_L	297_C	0.793	1.00
381_H	386_L	0.792	1.00
484_Y	487_R	0.791	1.00
89_Q	94_Q	0.790	1.00
366_R	372_D	0.789	1.00
80_S	83_H	0.788	1.00
86_L	89_Q	0.784	1.00
302_I	355_V	0.784	1.00
430_E	456_V	0.781	1.00
323_A	327_H	0.779	1.00
418_D	474_E	0.779	1.00
330_V	363_H	0.778	1.00
337_M	373_L	0.775	1.00
109_C	112_I	0.774	1.00
129_A	137_T	0.772	1.00
364_F	394_D	0.772	1.00
173_T	176_L	0.771	1.00
92_K	98_S	0.770	1.00
120_V	123_I	0.770	1.00
229_N	245_L	0.763	1.00
150_I	233_A	0.763	1.00
405_R	433_R	0.752	1.00
120_V	124_L	0.752	1.00
391_T	418_D	0.752	1.00
508_P	512_A	0.751	1.00
143_I	147_P	0.749	1.00
234_T	244_Q	0.748	1.00
290_L	295_Q	0.746	1.00
277_L	335_Y	0.744	1.00
485_L	490_V	0.741	1.00
273_I	276_G	0.737	1.00
94_Q	98_S	0.736	1.00
166_M	245_L	0.736	1.00
129_A	141_A	0.735	1.00
307_N	312_G	0.733	1.00
231_P	241_L	0.730	1.00
274_N	328_L	0.727	1.00
191_V	215_Y	0.726	1.00
284_L	302_I	0.726	1.00
346_V	349_M	0.723	1.00
402_R	405_R	0.719	1.00
130_P	137_T	0.718	1.00
453_N	481_Q	0.718	1.00
183_Q	217_V	0.717	1.00
431_T	452_V	0.715	1.00
97_R	100_G	0.715	1.00
461_I	485_L	0.714	1.00
270_S	326_H	0.712	1.00
204_D	228_V	0.712	1.00
171_L	325_E	0.712	1.00
344_R	352_Q	0.709	1.00
229_N	248_A	0.708	1.00
108_Y	112_I	0.707	1.00
285_F	307_N	0.707	1.00
509_K	512_A	0.707	1.00
208_Q	226_I	0.706	1.00
430_E	450_D	0.704	1.00
154_P	236_L	0.704	1.00
175_M	184_I	0.703	1.00
473_A	485_L	0.703	1.00
107_L	111_S	0.702	1.00
197_L	210_E	0.698	1.00
446_A	450_D	0.698	1.00
223_P	274_N	0.698	1.00
391_T	474_E	0.698	1.00
334_R	375_Q	0.696	1.00
372_D	375_Q	0.696	1.00
179_P	222_F	0.695	1.00
446_A	449_S	0.694	1.00
286_C	302_I	0.692	1.00
404_A	433_R	0.690	1.00
133_L	185_S	0.689	1.00
114_G	118_V	0.688	1.00
428_W	431_T	0.688	1.00
507_F	510_W	0.687	1.00
88_K	92_K	0.687	1.00
94_Q	100_G	0.687	1.00
149_L	152_W	0.685	1.00
496_Y	500_Q	0.685	1.00
162_G	241_L	0.684	1.00
270_S	322_I	0.682	1.00
110_S	115_Y	0.681	1.00
167_I	228_V	0.680	1.00
388_L	414_L	0.680	1.00
329_I	362_S	0.679	1.00
462_A	465_Q	0.676	1.00
377_W	381_H	0.675	1.00
183_Q	222_F	0.675	1.00
153_T	233_A	0.674	1.00
370_I	410_K	0.673	1.00
334_R	376_Y	0.673	1.00
373_L	412_V	0.672	1.00
283_E	505_R	0.671	1.00
444_T	473_A	0.670	1.00
364_F	403_I	0.670	1.00
126_E	129_A	0.669	1.00
446_A	453_N	0.669	1.00
172_L	184_I	0.669	1.00
80_S	85_P	0.669	1.00
476_V	482_A	0.668	1.00
304_L	319_F	0.668	1.00
93_L	100_G	0.668	1.00
133_L	189_L	0.666	1.00
456_V	463_L	0.666	1.00
99_I	102_V	0.665	1.00
371_K	374_N	0.663	1.00
471_L	491_H	0.662	1.00
182_P	243_T	0.662	1.00
416_I	428_W	0.662	1.00
153_T	162_G	0.660	1.00
348_P	352_Q	0.659	1.00
317_D	321_P	0.658	1.00
346_V	504_L	0.658	1.00
286_C	300_V	0.658	1.00
421_T	442_S	0.658	1.00
302_I	340_T	0.657	1.00
251_L	262_A	0.656	1.00
314_I	321_P	0.655	1.00
456_V	460_I	0.652	1.00
261_L	265_Y	0.651	1.00
163_V	230_G	0.651	1.00
89_Q	93_L	0.649	1.00
288_P	499_A	0.648	1.00
133_L	176_L	0.648	1.00
274_N	331_P	0.647	1.00
80_S	107_L	0.646	1.00
116_R	120_V	0.644	1.00
508_P	511_L	0.643	1.00
344_R	385_Q	0.643	1.00
502_M	507_F	0.642	1.00
215_Y	224_F	0.642	1.00
95_T	112_I	0.642	1.00
288_P	502_M	0.639	1.00
357_I	386_L	0.638	1.00
353_F	385_Q	0.636	1.00
165_E	230_G	0.634	1.00
109_C	114_G	0.634	1.00
236_L	240_Y	0.633	1.00
347_F	507_F	0.632	1.00
355_V	381_H	0.630	1.00
118_V	122_D	0.628	1.00
373_L	376_Y	0.628	1.00
477_E	496_Y	0.627	1.00
334_R	366_R	0.626	1.00
288_P	297_C	0.625	1.00
98_S	109_C	0.625	1.00
444_T	447_I	0.621	1.00
324_E	360_A	0.621	1.00
191_V	195_H	0.621	1.00
174_A	266_R	0.620	1.00
203_V	207_P	0.619	1.00
176_L	188_S	0.619	1.00
439_I	490_V	0.618	1.00
92_K	100_G	0.617	1.00
421_T	443_F	0.616	1.00
143_I	238_W	0.614	1.00
455_T	458_D	0.610	1.00
107_L	113_F	0.610	1.00
85_P	91_A	0.609	1.00
340_T	344_R	0.608	1.00
358_N	417_D	0.605	1.00
121_V	124_L	0.603	1.00
96_V	100_G	0.602	1.00
100_G	103_Q	0.602	1.00
95_T	99_I	0.601	1.00
193_K	197_L	0.600	1.00
295_Q	482_A	0.600	1.00
88_K	93_L	0.598	1.00
98_S	102_V	0.598	1.00
273_I	328_L	0.597	1.00
247_L	259_A	0.597	1.00
181_L	184_I	0.596	1.00
134_L	188_S	0.596	1.00
361_P	394_D	0.595	1.00
437_L	469_I	0.595	1.00
98_S	101_L	0.592	1.00
150_I	162_G	0.591	1.00
87_R	91_A	0.590	1.00
455_T	459_I	0.590	1.00
451_A	454_S	0.590	1.00
333_T	336_V	0.589	1.00
359_V	363_H	0.588	1.00
153_T	159_S	0.587	1.00
95_T	98_S	0.586	1.00
346_V	508_P	0.585	1.00
171_L	257_Y	0.584	1.00
269_F	272_E	0.584	1.00
413_K	436_V	0.582	1.00
179_P	183_Q	0.581	1.00
358_N	438_K	0.581	1.00
344_R	386_L	0.580	1.00
454_S	488_H	0.580	1.00
285_F	501_P	0.580	1.00
345_H	381_H	0.579	1.00
93_L	99_I	0.578	1.00
86_L	94_Q	0.576	1.00
198_Y	203_V	0.575	1.00
316_P	321_P	0.575	1.00
300_V	355_V	0.575	1.00
363_H	369_L	0.574	1.00
334_R	363_H	0.571	1.00
307_N	311_Q	0.570	1.00
301_E	438_K	0.570	1.00
299_G	356_G	0.570	1.00
381_H	385_Q	0.570	1.00
356_G	436_V	0.570	1.00
85_P	93_L	0.569	1.00
463_L	467_L	0.569	1.00
79_C	82_A	0.569	1.00
110_S	114_G	0.567	1.00
175_M	187_A	0.567	1.00
89_Q	98_S	0.564	1.00
299_G	353_F	0.564	1.00
303_L	358_N	0.563	1.00
146_S	162_G	0.563	1.00
480_E	483_K	0.563	1.00
108_Y	115_Y	0.563	1.00
98_S	103_Q	0.560	1.00
107_L	112_I	0.560	1.00
187_A	217_V	0.558	1.00
115_Y	119_P	0.556	1.00
263_T	267_M	0.555	1.00
498_Y	501_P	0.554	1.00
414_L	435_D	0.554	1.00
286_C	340_T	0.553	1.00
368_V	371_K	0.552	0.99
257_Y	261_L	0.551	0.99
94_Q	99_I	0.551	0.99
444_T	457_T	0.550	0.99
96_V	99_I	0.548	0.99
268_S	311_Q	0.546	0.99
227_N	252_S	0.542	0.99
119_P	122_D	0.542	0.99
277_L	332_L	0.542	0.99
350_S	512_A	0.541	0.99
164_M	241_L	0.541	0.99
209_P	213_E	0.541	0.99
168_N	184_I	0.540	0.99
153_T	160_N	0.540	0.99
338_A	372_D	0.539	0.99
255_V	260_W	0.538	0.99
295_Q	479_Q	0.537	0.99
461_I	491_H	0.537	0.99
86_L	91_A	0.537	0.99
315_S	318_V	0.537	0.99
362_S	365_R	0.537	0.99
407_L	412_V	0.534	0.99
268_S	310_R	0.532	0.99
124_L	129_A	0.532	0.99
195_H	199_G	0.532	0.99
231_P	235_A	0.530	0.99
88_K	94_Q	0.529	0.99
507_F	511_L	0.529	0.99
505_R	508_P	0.529	0.99
120_V	127_L	0.529	0.99
91_A	96_V	0.529	0.99
87_R	94_Q	0.528	0.99
292_A	486_R	0.528	0.99
195_H	207_P	0.526	0.99
301_E	417_D	0.526	0.99
361_P	428_W	0.526	0.99
337_M	357_I	0.525	0.99
314_I	318_V	0.524	0.99
332_L	336_V	0.523	0.99
208_Q	225_T	0.523	0.99
173_T	246_P	0.523	0.99
112_I	115_Y	0.523	0.99
143_I	242_P	0.522	0.99
304_L	313_W	0.521	0.99
320_I	324_E	0.521	0.99
231_P	245_L	0.521	0.99
336_V	340_T	0.519	0.99
287_Q	494_Q	0.518	0.99
334_R	368_V	0.518	0.99
269_F	306_W	0.517	0.99
439_I	460_I	0.517	0.99
460_I	464_G	0.517	0.99
88_K	91_A	0.516	0.99
273_I	306_W	0.516	0.99
86_L	93_L	0.514	0.99
447_I	454_S	0.513	0.99
182_P	218_S	0.512	0.99
94_Q	111_S	0.511	0.99
90_A	93_L	0.510	0.99
115_Y	118_V	0.509	0.99
337_M	372_D	0.509	0.99
337_M	341_I	0.509	0.99
139_D	185_S	0.509	0.99
481_Q	497_L	0.508	0.99
428_W	432_L	0.508	0.99
358_N	494_Q	0.506	0.99
262_A	265_Y	0.504	0.99
272_E	306_W	0.504	0.99
128_P	138_I	0.503	0.99
232_G	254_L	0.503	0.99
272_E	275_L	0.502	0.99
327_H	362_S	0.502	0.99
452_V	468_N	0.502	0.99
252_S	259_A	0.501	0.99
358_N	496_Y	0.501	0.99
168_N	246_P	0.500	0.99
315_S	321_P	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4rnhA	2	0.7105	100	0.299	Contact Map
4j40A	2	0.4643	100	0.317	Contact Map
3pjxA	1	0.7274	100	0.324	Contact Map
3gfzA	2	0.656	100	0.422	Contact Map
4hjfA	1	0.4812	100	0.435	Contact Map
4kieA	1	0.4812	100	0.497	Contact Map
2r6oA	2	0.4737	100	0.504	Contact Map
3sy8A	6	0.735	100	0.506	Contact Map
4hu4A	1	0.4549	100	0.51	Contact Map
4rniA	2	0.468	100	0.512	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0126 seconds.