YNJC - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YNJC - Inner membrane ABC transporter permease protein YnjC

UniProt:	P76224	Sequences: MATPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKWLLQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDIDQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKPATPLLPGNTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLKLDGSWTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFAVGIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWVGYVRQGLR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG14005
Length:	511 (464)
Sequences:	4195 (3024)
Seq/√Len:	140.4

ECOLI - YNJC THIP
HALSA - Q9HMT4 Q9HR05
SULSO - Q97VC0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
307_Q	311_N	5.880	1.00
15_A	23_P	5.421	1.00
410_A	420_I	5.338	1.00
169_S	412_T	4.377	1.00
67_G	140_A	4.099	1.00
167_L	177_C	3.951	1.00
419_K	422_F	3.731	1.00
63_I	136_G	3.542	1.00
295_V	299_V	3.338	1.00
65_A	194_M	3.277	1.00
175_W	179_N	3.223	1.00
299_V	303_I	3.215	1.00
316_I	320_T	3.190	1.00
398_A	432_P	3.087	1.00
15_A	22_A	3.077	1.00
176_Q	180_W	3.076	1.00
63_I	132_G	3.070	1.00
23_P	41_W	2.924	1.00
15_A	19_V	2.906	1.00
318_S	445_I	2.777	1.00
170_L	413_L	2.745	1.00
328_I	384_L	2.728	1.00
55_L	59_V	2.722	1.00
327_F	437_F	2.661	1.00
72_A	147_L	2.616	1.00
419_K	423_Y	2.615	1.00
173_S	176_Q	2.570	1.00
415_W	419_K	2.484	1.00
415_W	423_Y	2.433	1.00
87_R	91_R	2.323	1.00
300_L	303_I	2.303	1.00
19_V	23_P	2.272	1.00
326_T	437_F	2.257	1.00
416_S	419_K	2.247	1.00
287_A	291_P	2.217	1.00
81_P	164_V	2.176	1.00
165_I	408_L	2.160	1.00
69_L	194_M	2.155	1.00
159_W	162_Q	2.153	1.00
15_A	18_A	2.117	1.00
205_V	224_W	2.096	1.00
172_Y	415_W	2.093	1.00
324_V	380_V	2.073	1.00
147_L	197_I	2.069	1.00
291_P	295_V	2.018	1.00
59_V	132_G	1.996	1.00
176_Q	179_N	1.959	1.00
132_G	136_G	1.927	1.00
180_W	423_Y	1.925	1.00
18_A	23_P	1.921	1.00
492_I	496_T	1.897	1.00
147_L	151_L	1.886	1.00
254_L	258_L	1.863	1.00
171_G	414_G	1.853	1.00
72_A	151_L	1.840	1.00
275_K	280_L	1.836	1.00
51_P	55_L	1.815	1.00
61_T	198_V	1.810	1.00
288_I	292_L	1.804	1.00
474_S	477_I	1.794	1.00
73_L	151_L	1.782	1.00
172_Y	180_W	1.769	1.00
234_Q	237_K	1.749	1.00
299_V	302_A	1.734	1.00
410_A	415_W	1.729	1.00
167_L	181_L	1.671	1.00
166_V	409_I	1.645	1.00
147_L	193_A	1.645	1.00
333_L	391_M	1.638	1.00
325_A	444_G	1.636	1.00
23_P	26_P	1.635	1.00
73_L	186_V	1.632	1.00
320_T	324_V	1.611	1.00
295_V	303_I	1.606	1.00
164_V	182_L	1.597	1.00
52_Q	55_L	1.585	1.00
174_R	177_C	1.563	1.00
282_P	295_V	1.562	1.00
53_A	222_I	1.559	1.00
154_V	189_A	1.555	1.00
289_F	293_T	1.545	1.00
120_Y	124_F	1.544	1.00
41_W	243_L	1.530	1.00
68_A	140_A	1.525	1.00
302_A	306_D	1.512	1.00
284_N	299_V	1.506	1.00
172_Y	176_Q	1.491	1.00
298_V	302_A	1.485	1.00
292_L	299_V	1.478	1.00
300_L	483_L	1.477	1.00
291_P	299_V	1.462	1.00
136_G	140_A	1.455	1.00
168_D	411_Q	1.447	1.00
323_L	327_F	1.441	1.00
107_A	138_T	1.441	1.00
251_A	255_L	1.439	1.00
67_G	136_G	1.438	1.00
57_T	202_L	1.432	1.00
334_L	433_V	1.428	1.00
282_P	299_V	1.419	1.00
15_A	26_P	1.414	1.00
322_G	326_T	1.411	1.00
417_R	420_I	1.402	1.00
60_S	132_G	1.389	1.00
295_V	306_D	1.383	1.00
56_A	216_P	1.380	1.00
320_T	323_L	1.376	1.00
274_R	279_P	1.371	1.00
16_M	20_I	1.352	1.00
273_V	279_P	1.348	1.00
295_V	300_L	1.338	1.00
402_I	429_M	1.337	1.00
489_P	492_I	1.332	1.00
258_L	261_R	1.332	1.00
15_A	20_I	1.332	1.00
288_I	300_L	1.332	1.00
321_M	380_V	1.327	1.00
288_I	303_I	1.326	1.00
164_V	177_C	1.319	1.00
418_A	422_F	1.315	1.00
70_L	74_L	1.311	1.00
288_I	291_P	1.308	1.00
282_P	303_I	1.302	1.00
299_V	306_D	1.302	1.00
132_G	216_P	1.300	1.00
63_I	140_A	1.297	1.00
68_A	197_I	1.296	1.00
20_I	23_P	1.290	1.00
168_D	177_C	1.286	1.00
284_N	292_L	1.279	1.00
133_I	137_L	1.276	1.00
420_I	424_V	1.271	1.00
451_T	461_T	1.269	1.00
296_L	299_V	1.264	1.00
292_L	300_L	1.258	1.00
247_L	251_A	1.256	1.00
15_A	21_Y	1.256	1.00
296_L	300_L	1.251	1.00
342_Q	407_I	1.249	1.00
303_I	306_D	1.248	1.00
447_Q	451_T	1.247	1.00
406_L	428_L	1.245	1.00
407_I	425_K	1.244	1.00
383_H	451_T	1.243	1.00
19_V	22_A	1.240	1.00
345_Q	393_F	1.240	1.00
322_G	445_I	1.237	1.00
223_S	241_A	1.237	1.00
177_C	181_L	1.230	1.00
285_T	289_F	1.230	1.00
337_L	399_W	1.230	1.00
271_D	278_T	1.222	1.00
466_A	482_A	1.222	1.00
295_V	302_A	1.218	1.00
103_F	142_K	1.211	1.00
295_V	298_V	1.208	1.00
186_V	189_A	1.201	1.00
271_D	277_A	1.195	1.00
18_A	22_A	1.193	1.00
300_L	304_L	1.191	1.00
14_W	18_A	1.191	1.00
313_E	316_I	1.189	1.00
59_V	136_G	1.189	1.00
329_A	384_L	1.183	1.00
89_C	148_L	1.178	1.00
284_N	288_I	1.175	1.00
283_G	287_A	1.172	1.00
405_R	408_L	1.171	1.00
291_P	302_A	1.167	0.99
312_S	316_I	1.167	0.99
271_D	280_L	1.164	0.99
129_D	134_G	1.158	0.99
383_H	444_G	1.152	0.99
83_P	279_P	1.140	0.99
59_V	63_I	1.138	0.99
275_K	279_P	1.127	0.99
292_L	303_I	1.126	0.99
287_A	292_L	1.123	0.99
410_A	423_Y	1.118	0.99
298_V	303_I	1.115	0.99
108_L	130_R	1.114	0.99
128_M	131_F	1.113	0.99
15_A	24_L	1.110	0.99
63_I	67_G	1.096	0.99
69_L	147_L	1.095	0.99
292_L	302_A	1.095	0.99
301_L	305_A	1.093	0.99
368_L	371_K	1.093	0.99
79_L	148_L	1.088	0.99
258_L	262_S	1.088	0.99
135_L	208_A	1.085	0.99
288_I	299_V	1.079	0.99
41_W	44_L	1.076	0.99
277_A	280_L	1.068	0.99
479_A	482_A	1.066	0.99
14_W	366_L	1.064	0.99
292_L	295_V	1.063	0.99
394_I	436_A	1.059	0.99
163_Q	185_S	1.059	0.99
167_L	172_Y	1.054	0.99
55_L	58_L	1.053	0.99
382_G	450_P	1.051	0.99
395_L	436_A	1.045	0.99
297_C	301_L	1.045	0.99
151_L	190_L	1.045	0.99
67_G	71_I	1.043	0.99
315_L	488_L	1.041	0.99
455_G	464_T	1.033	0.99
287_A	302_A	1.033	0.99
410_A	424_V	1.032	0.99
202_L	245_L	1.029	0.99
317_N	459_F	1.029	0.99
274_R	277_A	1.026	0.99
64_A	139_L	1.025	0.99
21_Y	26_P	1.023	0.99
327_F	331_L	1.021	0.99
73_L	190_L	1.018	0.99
312_S	315_L	1.018	0.99
284_N	291_P	1.016	0.99
274_R	280_L	1.016	0.99
21_Y	25_I	1.015	0.99
391_M	440_G	1.014	0.99
482_A	485_Q	1.012	0.99
287_A	295_V	1.011	0.99
270_V	273_V	1.006	0.98
179_N	183_L	1.005	0.98
139_L	204_V	1.004	0.98
143_E	201_S	0.997	0.98
60_S	64_A	0.996	0.98
22_A	25_I	0.995	0.98
102_A	482_A	0.994	0.98
325_A	384_L	0.990	0.98
329_A	440_G	0.989	0.98
285_T	293_T	0.987	0.98
164_V	168_D	0.980	0.98
356_A	386_W	0.978	0.98
141_V	291_P	0.974	0.98
281_L	292_L	0.971	0.98
168_D	174_R	0.971	0.98
135_L	216_P	0.969	0.98
315_L	462_L	0.968	0.98
494_A	498_L	0.968	0.98
301_L	304_L	0.967	0.98
302_A	305_A	0.967	0.98
291_P	303_I	0.965	0.98
360_V	449_M	0.964	0.98
284_N	287_A	0.953	0.98
367_A	378_A	0.953	0.98
186_V	190_L	0.948	0.98
485_Q	489_P	0.944	0.98
151_L	186_V	0.942	0.98
75_V	92_L	0.942	0.98
296_L	303_I	0.939	0.98
18_A	26_P	0.936	0.98
243_L	247_L	0.936	0.98
14_W	23_P	0.930	0.97
273_V	280_L	0.928	0.97
296_L	306_D	0.925	0.97
288_I	295_V	0.920	0.97
426_C	433_V	0.920	0.97
465_E	468_A	0.919	0.97
491_I	495_L	0.918	0.97
484_W	488_L	0.917	0.97
18_A	21_Y	0.917	0.97
120_Y	123_Y	0.913	0.97
275_K	278_T	0.913	0.97
316_I	319_L	0.903	0.97
226_W	234_Q	0.903	0.97
289_F	294_G	0.897	0.97
74_L	78_A	0.896	0.97
222_I	225_Q	0.896	0.97
58_L	62_T	0.893	0.97
78_A	82_G	0.893	0.97
429_M	432_P	0.892	0.97
489_P	493_F	0.891	0.97
150_I	193_A	0.890	0.97
270_V	278_T	0.888	0.97
282_P	285_T	0.888	0.97
77_V	178_L	0.884	0.97
490_L	494_A	0.884	0.97
411_Q	420_I	0.882	0.97
89_C	152_A	0.881	0.97
108_L	210_I	0.875	0.96
391_M	436_A	0.875	0.96
265_R	268_P	0.870	0.96
409_I	412_T	0.870	0.96
272_G	279_P	0.869	0.96
23_P	243_L	0.868	0.96
57_T	220_A	0.868	0.96
273_V	277_A	0.867	0.96
395_L	429_M	0.867	0.96
193_A	197_I	0.867	0.96
466_A	485_Q	0.866	0.96
59_V	62_T	0.866	0.96
42_Q	46_A	0.864	0.96
135_L	212_G	0.862	0.96
314_A	465_E	0.862	0.96
173_S	177_C	0.861	0.96
273_V	276_P	0.860	0.96
144_S	148_L	0.858	0.96
281_L	299_V	0.858	0.96
317_N	320_T	0.853	0.96
41_W	45_F	0.852	0.96
281_L	291_P	0.848	0.96
441_F	492_I	0.848	0.96
19_V	362_G	0.848	0.96
271_D	279_P	0.846	0.96
218_T	221_V	0.844	0.96
299_V	304_L	0.843	0.96
287_A	299_V	0.841	0.95
86_Q	89_C	0.837	0.95
469_L	481_Q	0.836	0.95
288_I	296_L	0.835	0.95
402_I	428_L	0.834	0.95
284_N	303_I	0.830	0.95
383_H	447_Q	0.827	0.95
274_R	278_T	0.826	0.95
326_T	330_L	0.824	0.95
62_T	194_M	0.823	0.95
38_L	42_Q	0.822	0.95
192_M	393_F	0.821	0.95
375_S	378_A	0.820	0.95
20_I	24_L	0.820	0.95
75_V	144_S	0.818	0.95
50_L	54_L	0.816	0.95
155_L	182_L	0.816	0.95
271_D	274_R	0.815	0.95
138_T	207_V	0.814	0.95
77_V	155_L	0.810	0.94
206_D	356_A	0.809	0.94
420_I	423_Y	0.808	0.94
19_V	24_L	0.808	0.94
205_V	209_I	0.807	0.94
369_W	372_L	0.804	0.94
460_P	468_A	0.804	0.94
270_V	274_R	0.802	0.94
485_Q	492_I	0.802	0.94
376_W	380_V	0.801	0.94
282_P	286_L	0.801	0.94
204_V	356_A	0.801	0.94
71_I	144_S	0.799	0.94
321_M	376_W	0.797	0.94
271_D	276_P	0.793	0.94
17_V	23_P	0.793	0.94
174_R	178_L	0.791	0.94
399_W	429_M	0.788	0.94
226_W	231_D	0.788	0.94
300_L	305_A	0.785	0.93
217_P	222_I	0.785	0.93
373_D	378_A	0.784	0.93
17_V	21_Y	0.784	0.93
337_L	395_L	0.783	0.93
416_S	420_I	0.783	0.93
336_W	348_L	0.782	0.93
322_G	444_G	0.782	0.93
359_L	466_A	0.781	0.93
398_A	429_M	0.781	0.93
60_S	135_L	0.780	0.93
276_P	279_P	0.778	0.93
282_P	289_F	0.777	0.93
151_L	155_L	0.777	0.93
337_L	341_P	0.777	0.93
14_W	24_L	0.775	0.93
71_I	140_A	0.774	0.93
157_E	401_R	0.773	0.93
122_P	125_T	0.771	0.93
155_L	186_V	0.770	0.93
61_T	202_L	0.770	0.93
333_L	392_L	0.769	0.93
219_L	241_A	0.767	0.93
336_W	392_L	0.766	0.93
281_L	284_N	0.766	0.93
299_V	305_A	0.764	0.93
484_W	487_L	0.763	0.93
89_C	156_S	0.763	0.93
64_A	201_S	0.761	0.92
223_S	245_L	0.760	0.92
116_L	120_Y	0.759	0.92
324_V	327_F	0.758	0.92
303_I	483_L	0.758	0.92
492_I	497_A	0.758	0.92
320_T	376_W	0.756	0.92
117_L	120_Y	0.756	0.92
65_A	198_V	0.746	0.92
158_K	186_V	0.746	0.92
325_A	383_H	0.744	0.92
78_A	84_K	0.739	0.91
72_A	148_L	0.739	0.91
493_F	496_T	0.738	0.91
281_L	288_I	0.738	0.91
101_V	204_V	0.738	0.91
284_N	297_C	0.737	0.91
56_A	59_V	0.736	0.91
209_I	467_V	0.734	0.91
60_S	139_L	0.734	0.91
22_A	26_P	0.733	0.91
318_S	463_T	0.733	0.91
387_V	440_G	0.731	0.91
18_A	25_I	0.731	0.91
321_M	379_V	0.729	0.91
322_G	441_F	0.729	0.91
455_G	460_P	0.728	0.91
41_W	240_L	0.727	0.91
176_Q	419_K	0.725	0.90
379_V	383_H	0.723	0.90
154_V	186_V	0.721	0.90
364_Y	373_D	0.720	0.90
256_S	260_W	0.720	0.90
14_W	17_V	0.720	0.90
152_A	156_S	0.719	0.90
44_L	240_L	0.718	0.90
372_L	375_S	0.718	0.90
68_A	147_L	0.715	0.90
189_A	193_A	0.714	0.90
342_Q	404_S	0.709	0.89
13_L	17_V	0.708	0.89
298_V	304_L	0.705	0.89
119_D	122_P	0.704	0.89
103_F	166_V	0.702	0.89
271_D	275_K	0.701	0.89
285_T	288_I	0.700	0.89
353_L	356_A	0.700	0.89
284_N	300_L	0.699	0.89
79_L	82_G	0.697	0.89
103_F	141_V	0.697	0.89
321_M	383_H	0.697	0.89
166_V	169_S	0.696	0.89
98_I	103_F	0.696	0.89
222_I	226_W	0.694	0.88
54_L	248_L	0.692	0.88
298_V	301_L	0.691	0.88
292_L	296_L	0.690	0.88
270_V	279_P	0.689	0.88
298_V	306_D	0.687	0.88
279_P	283_G	0.687	0.88
421_F	425_K	0.684	0.88
21_Y	24_L	0.680	0.87
60_S	218_T	0.680	0.87
200_W	203_S	0.680	0.87
485_Q	488_L	0.679	0.87
15_A	25_I	0.679	0.87
82_G	278_T	0.679	0.87
16_M	25_I	0.678	0.87
407_I	420_I	0.678	0.87
104_A	206_D	0.676	0.87
348_L	392_L	0.675	0.87
482_A	486_L	0.675	0.87
338_E	399_W	0.674	0.87
291_P	294_G	0.674	0.87
282_P	301_L	0.674	0.87
313_E	317_N	0.673	0.87
324_V	328_I	0.672	0.87
145_A	356_A	0.672	0.87
173_S	179_N	0.671	0.87
65_A	69_L	0.671	0.87
118_Y	122_P	0.670	0.87
416_S	422_F	0.669	0.87
330_L	395_L	0.668	0.87
297_C	302_A	0.666	0.86
218_T	461_T	0.665	0.86
319_L	323_L	0.664	0.86
20_I	286_L	0.663	0.86
53_A	57_T	0.662	0.86
203_S	450_P	0.662	0.86
447_Q	461_T	0.661	0.86
298_V	305_A	0.660	0.86
422_F	426_C	0.656	0.86
332_L	384_L	0.655	0.85
205_V	467_V	0.653	0.85
134_G	224_W	0.652	0.85
292_L	306_D	0.652	0.85
300_L	306_D	0.652	0.85
67_G	70_L	0.652	0.85
379_V	450_P	0.651	0.85
374_G	378_A	0.651	0.85
339_W	343_R	0.650	0.85
272_G	278_T	0.649	0.85
282_P	302_A	0.647	0.85
56_A	221_V	0.645	0.85
19_V	25_I	0.645	0.85
227_L	361_A	0.644	0.84
151_L	193_A	0.643	0.84
218_T	462_L	0.643	0.84
265_R	269_R	0.643	0.84
291_P	306_D	0.642	0.84
283_G	286_L	0.642	0.84
226_W	237_K	0.641	0.84
452_L	464_T	0.641	0.84
283_G	295_V	0.640	0.84
494_A	497_A	0.639	0.84
279_P	286_L	0.639	0.84
287_A	293_T	0.639	0.84
481_Q	485_Q	0.638	0.84
296_L	302_A	0.638	0.84
17_V	52_Q	0.637	0.84
200_W	443_V	0.635	0.84
281_L	285_T	0.635	0.84
51_P	54_L	0.635	0.84
99_P	206_D	0.634	0.84
204_V	446_A	0.631	0.83
158_K	182_L	0.631	0.83
282_P	291_P	0.631	0.83
491_I	497_A	0.630	0.83
282_P	292_L	0.630	0.83
273_V	278_T	0.627	0.83
445_I	488_L	0.626	0.83
16_M	24_L	0.626	0.83
475_N	479_A	0.625	0.83
284_N	298_V	0.624	0.83
75_V	211_L	0.624	0.83
448_Y	461_T	0.623	0.83
337_L	396_Q	0.623	0.83
217_P	221_V	0.622	0.82
294_G	297_C	0.621	0.82
206_D	447_Q	0.621	0.82
238_G	446_A	0.621	0.82
181_L	424_V	0.621	0.82
476_G	485_Q	0.620	0.82
475_N	482_A	0.620	0.82
106_S	212_G	0.619	0.82
73_L	147_L	0.619	0.82
38_L	43_A	0.618	0.82
330_L	437_F	0.618	0.82
328_I	380_V	0.617	0.82
64_A	68_A	0.616	0.82
61_T	65_A	0.616	0.82
286_L	290_L	0.616	0.82
363_Q	381_W	0.614	0.82
291_P	491_I	0.613	0.81
316_I	347_W	0.612	0.81
260_W	263_W	0.611	0.81
287_A	300_L	0.611	0.81
292_L	298_V	0.608	0.81
193_A	447_Q	0.608	0.81
43_A	46_A	0.608	0.81
399_W	425_K	0.607	0.81
330_L	433_V	0.607	0.81
479_A	485_Q	0.607	0.81
142_K	446_A	0.605	0.81
354_L	358_P	0.605	0.81
480_A	483_L	0.604	0.81
17_V	70_L	0.603	0.80
338_E	374_G	0.602	0.80
456_A	459_F	0.602	0.80
251_A	323_L	0.602	0.80
14_W	19_V	0.601	0.80
248_L	255_L	0.599	0.80
204_V	449_M	0.599	0.80
329_A	391_M	0.598	0.80
112_A	130_R	0.596	0.80
421_F	426_C	0.596	0.80
322_G	325_A	0.595	0.80
495_L	498_L	0.594	0.79
107_A	448_Y	0.590	0.79
460_P	464_T	0.589	0.79
432_P	436_A	0.588	0.79
151_L	189_A	0.587	0.79
56_A	60_S	0.585	0.78
364_Y	454_L	0.585	0.78
228_T	464_T	0.584	0.78
283_G	288_I	0.584	0.78
363_Q	385_L	0.583	0.78
129_D	145_A	0.583	0.78
287_A	296_L	0.582	0.78
145_A	358_P	0.582	0.78
72_A	76_I	0.582	0.78
297_C	300_L	0.582	0.78
101_V	356_A	0.581	0.78
282_P	288_I	0.581	0.78
390_W	443_V	0.580	0.78
100_H	103_F	0.579	0.78
92_L	144_S	0.578	0.78
367_A	372_L	0.578	0.78
451_T	463_T	0.578	0.78
288_I	293_T	0.578	0.78
282_P	297_C	0.576	0.77
200_W	352_I	0.576	0.77
395_L	433_V	0.576	0.77
76_I	80_W	0.575	0.77
17_V	175_W	0.575	0.77
386_W	447_Q	0.574	0.77
260_W	265_R	0.573	0.77
446_A	463_T	0.572	0.77
210_I	469_L	0.571	0.77
366_L	374_G	0.571	0.77
73_L	178_L	0.570	0.77
85_W	277_A	0.569	0.76
276_P	280_L	0.569	0.76
83_P	86_Q	0.569	0.76
81_P	182_L	0.569	0.76
452_L	467_V	0.569	0.76
18_A	24_L	0.568	0.76
382_G	454_L	0.568	0.76
285_T	300_L	0.567	0.76
326_T	441_F	0.566	0.76
284_N	306_D	0.566	0.76
282_P	298_V	0.565	0.76
318_S	322_G	0.564	0.76
282_P	300_L	0.564	0.76
119_D	123_Y	0.564	0.76
272_G	280_L	0.563	0.76
48_P	52_Q	0.562	0.76
44_L	50_L	0.561	0.75
318_S	444_G	0.560	0.75
104_A	362_G	0.560	0.75
284_N	301_L	0.559	0.75
14_W	22_A	0.559	0.75
285_T	303_I	0.559	0.75
66_V	69_L	0.557	0.75
337_L	392_L	0.557	0.75
178_L	183_L	0.557	0.75
140_A	144_S	0.555	0.75
336_W	388_M	0.554	0.75
351_P	355_P	0.554	0.75
291_P	300_L	0.554	0.75
330_L	436_A	0.552	0.74
135_L	207_V	0.550	0.74
363_Q	426_C	0.549	0.74
288_I	306_D	0.549	0.74
327_F	330_L	0.549	0.74
190_L	257_Y	0.549	0.74
195_L	253_V	0.548	0.74
321_M	459_F	0.548	0.74
135_L	211_L	0.548	0.74
415_W	424_V	0.548	0.74
283_G	297_C	0.548	0.74
327_F	332_L	0.547	0.74
208_A	218_T	0.547	0.74
146_F	193_A	0.546	0.74
377_T	380_V	0.545	0.73
279_P	282_P	0.543	0.73
242_S	358_P	0.542	0.73
108_L	112_A	0.541	0.73
205_V	359_L	0.541	0.73
293_T	297_C	0.541	0.73
251_A	254_L	0.540	0.73
245_L	355_P	0.540	0.73
14_W	26_P	0.540	0.73
290_L	295_V	0.538	0.72
76_I	151_L	0.538	0.72
101_V	449_M	0.536	0.72
131_F	134_G	0.536	0.72
294_G	298_V	0.536	0.72
320_T	491_I	0.535	0.72
253_V	382_G	0.535	0.72
155_L	355_P	0.535	0.72
60_S	220_A	0.534	0.72
111_F	129_D	0.534	0.72
68_A	144_S	0.534	0.72
489_P	496_T	0.531	0.71
363_Q	382_G	0.530	0.71
238_G	493_F	0.529	0.71
453_W	466_A	0.528	0.71
20_I	25_I	0.528	0.71
200_W	449_M	0.528	0.71
120_Y	490_L	0.528	0.71
53_A	219_L	0.527	0.71
187_A	259_L	0.527	0.71
193_A	451_T	0.526	0.71
463_T	470_S	0.525	0.71
270_V	280_L	0.524	0.70
379_V	451_T	0.524	0.70
266_T	269_R	0.524	0.70
53_A	217_P	0.524	0.70
297_C	305_A	0.522	0.70
48_P	70_L	0.521	0.70
218_T	467_V	0.521	0.70
205_V	221_V	0.519	0.70
70_L	422_F	0.518	0.70
239_A	365_T	0.518	0.70
155_L	184_P	0.515	0.69
251_A	283_G	0.515	0.69
320_T	380_V	0.515	0.69
38_L	41_W	0.514	0.69
287_A	301_L	0.514	0.69
338_E	407_I	0.514	0.69
220_A	245_L	0.514	0.69
349_W	389_P	0.514	0.69
473_G	482_A	0.513	0.69
64_A	132_G	0.512	0.69
139_L	208_A	0.512	0.69
83_P	278_T	0.512	0.69
295_V	301_L	0.511	0.69
409_I	415_W	0.510	0.68
266_T	404_S	0.510	0.68
60_S	216_P	0.509	0.68
106_S	298_V	0.507	0.68
278_T	281_L	0.507	0.68
325_A	380_V	0.507	0.68
440_G	444_G	0.504	0.68
131_F	170_L	0.503	0.67
247_L	316_I	0.503	0.67
315_L	319_L	0.502	0.67
183_L	188_P	0.502	0.67
58_L	175_W	0.502	0.67
114_G	120_Y	0.500	0.67

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2onkC	2	0.4736	100	0.648	Contact Map
4tquM	1	0.4932	100	0.66	Contact Map
3d31C	2	0.4716	100	0.664	Contact Map
3rlfF	1	0.4873	100	0.686	Contact Map
3rlfG	1	0.5108	100	0.689	Contact Map
4tquN	1	0.4755	100	0.704	Contact Map
4ymuD	2	0.4149	99.9	0.752	Contact Map
3tuiA	2	0.4051	99.9	0.769	Contact Map
2m20A	2	0.0724	9.1	0.975	Contact Map
2kluA	1	0.0802	9	0.975	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0201 seconds.