YBJT - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YBJT - Uncharacterized protein YbjT

UniProt:	P75822	Sequences: MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13689
Length:	476 (467)
Sequences:	733 (474)
Seq/√Len:	21.9

ECOLI - YBJT

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
221_H	288_D	5.720	1.00
70_V	94_V	5.364	1.00
224_A	288_D	5.214	1.00
54_L	74_V	5.036	1.00
69_T	195_L	4.988	1.00
203_R	275_A	4.439	1.00
32_A	52_V	4.178	1.00
14_I	184_L	3.758	1.00
452_M	459_I	3.584	1.00
56_W	59_N	3.533	1.00
186_N	284_L	3.501	1.00
36_V	51_K	3.466	1.00
7_V	19_V	3.428	1.00
87_E	128_A	3.335	1.00
99_R	137_N	3.314	1.00
190_Y	281_P	3.125	1.00
106_L	138_V	2.812	0.99
134_R	142_E	2.760	0.99
186_N	282_Q	2.697	0.99
60_L	93_N	2.689	0.99
84_I	124_R	2.644	0.99
131_D	135_E	2.619	0.99
289_D	292_R	2.513	0.98
183_A	285_I	2.444	0.98
141_T	197_H	2.442	0.98
276_L	280_I	2.439	0.98
88_R	128_A	2.349	0.97
88_R	132_I	2.331	0.97
421_F	432_I	2.326	0.97
208_A	271_A	2.319	0.97
221_H	224_A	2.305	0.97
16_Q	305_S	2.303	0.97
99_R	136_A	2.299	0.97
64_L	70_V	2.260	0.96
367_M	370_A	2.258	0.96
225_V	292_R	2.246	0.96
367_M	371_I	2.244	0.96
61_P	100_E	2.244	0.96
177_S	268_D	2.243	0.96
176_R	216_Q	2.232	0.96
337_S	340_A	2.204	0.96
239_T	250_I	2.202	0.96
85_A	89_Q	2.164	0.95
4_R	66_D	2.154	0.95
35_H	38_R	2.127	0.95
4_R	28_Q	2.126	0.95
287_F	291_V	2.117	0.95
241_W	245_W	2.117	0.95
400_E	403_K	2.112	0.95
127_Q	131_D	2.070	0.94
186_N	189_H	2.059	0.94
171_P	175_V	2.028	0.93
71_Y	195_L	1.993	0.93
286_A	289_D	1.991	0.93
277_R	282_Q	1.990	0.93
88_R	92_L	1.954	0.92
143_L	194_L	1.943	0.92
247_L	262_I	1.930	0.91
95_R	138_V	1.926	0.91
4_R	68_D	1.893	0.90
397_I	408_L	1.892	0.90
357_G	360_L	1.891	0.90
146_G	271_A	1.880	0.90
253_V	257_T	1.869	0.90
185_E	293_S	1.866	0.90
30_L	48_S	1.861	0.90
9_G	12_G	1.861	0.90
133_L	140_V	1.861	0.90
178_R	268_D	1.852	0.89
106_L	139_P	1.830	0.89
136_A	140_V	1.829	0.89
425_D	430_R	1.820	0.89
356_F	462_G	1.799	0.88
175_V	219_F	1.786	0.88
98_L	106_L	1.762	0.87
245_W	259_R	1.759	0.87
54_L	90_V	1.755	0.87
62_A	65_Q	1.750	0.87
113_Q	144_R	1.749	0.87
83_F	185_E	1.747	0.86
416_L	439_H	1.746	0.86
321_Y	326_K	1.739	0.86
68_D	104_K	1.735	0.86
424_E	431_T	1.734	0.86
187_L	207_A	1.723	0.86
7_V	29_I	1.715	0.85
452_M	455_A	1.714	0.85
20_R	26_G	1.712	0.85
334_T	468_A	1.702	0.85
26_G	29_I	1.655	0.83
216_Q	220_E	1.654	0.83
168_V	233_I	1.651	0.83
7_V	188_L	1.651	0.83
248_N	262_I	1.649	0.83
6_L	67_I	1.640	0.83
248_N	255_P	1.632	0.82
159_M	287_F	1.625	0.82
21_T	188_L	1.616	0.82
422_S	433_D	1.612	0.82
110_S	142_E	1.607	0.81
64_L	94_V	1.593	0.81
59_N	93_N	1.588	0.81
240_R	246_F	1.576	0.80
338_L	403_K	1.560	0.79
54_L	87_E	1.524	0.78
275_A	278_A	1.517	0.77
450_L	453_I	1.516	0.77
170_T	235_I	1.514	0.77
25_Q	192_V	1.483	0.76
418_R	434_V	1.479	0.76
285_I	289_D	1.478	0.76
218_Q	287_F	1.469	0.75
324_F	332_V	1.442	0.74
21_T	304_S	1.428	0.73
9_G	15_G	1.414	0.72
168_V	229_R	1.409	0.72
230_R	354_Y	1.399	0.71
190_Y	280_I	1.389	0.71
225_V	288_D	1.380	0.70
413_A	417_G	1.378	0.70
110_S	130_A	1.370	0.70
24_Q	46_N	1.365	0.69
169_L	246_F	1.363	0.69
159_M	446_L	1.361	0.69
395_K	410_G	1.354	0.69
12_G	15_G	1.353	0.69
129_T	142_E	1.340	0.68
341_L	468_A	1.336	0.68
423_L	430_R	1.320	0.67
228_K	231_W	1.298	0.65
255_P	262_I	1.295	0.65
144_R	204_I	1.291	0.65
136_A	202_H	1.250	0.62
393_S	413_A	1.250	0.62
60_L	64_L	1.247	0.62
448_Y	456_H	1.247	0.62
426_K	431_T	1.245	0.62
180_T	209_G	1.244	0.62
452_M	457_L	1.240	0.62
57_P	60_L	1.222	0.61
10_A	29_I	1.221	0.61
33_A	38_R	1.210	0.60
8_L	94_V	1.209	0.60
410_G	417_G	1.208	0.60
444_P	447_F	1.207	0.60
92_L	135_E	1.200	0.59
321_Y	325_A	1.198	0.59
122_H	126_R	1.196	0.59
12_G	34_R	1.196	0.59
344_V	352_E	1.189	0.58
98_L	103_V	1.170	0.57
165_N	247_L	1.166	0.57
194_L	200_S	1.163	0.57
322_G	328_A	1.161	0.57
273_D	276_L	1.160	0.57
190_Y	219_F	1.154	0.56
398_V	404_Q	1.152	0.56
466_Q	470_L	1.150	0.56
264_G	437_F	1.146	0.56
180_T	210_P	1.146	0.56
339_A	345_V	1.142	0.55
186_N	285_I	1.141	0.55
148_I	187_L	1.136	0.55
203_R	273_D	1.130	0.55
344_V	467_I	1.118	0.54
243_S	246_F	1.115	0.54
39_L	468_A	1.109	0.53
273_D	429_Y	1.106	0.53
28_Q	48_S	1.103	0.53
134_R	204_I	1.094	0.52
19_V	192_V	1.088	0.52
164_Y	226_S	1.086	0.52
358_N	432_I	1.084	0.51
38_R	262_I	1.080	0.51
209_G	215_Y	1.077	0.51
129_T	134_R	1.074	0.51
32_A	148_I	1.072	0.51
432_I	464_A	1.067	0.50
217_Q	231_W	1.065	0.50
338_L	429_Y	1.064	0.50
347_Q	383_E	1.060	0.50
217_Q	220_E	1.053	0.49
404_Q	408_L	1.052	0.49
123_L	180_T	1.051	0.49
36_V	49_C	1.049	0.49
161_D	327_Q	1.047	0.49
350_G	378_G	1.042	0.49
161_D	247_L	1.038	0.48
177_S	266_K	1.037	0.48
357_G	459_I	1.037	0.48
19_V	47_V	1.031	0.48
329_G	437_F	1.027	0.48
319_P	322_G	1.025	0.47
393_S	410_G	1.022	0.47
141_T	200_S	1.014	0.47
424_E	433_D	1.014	0.47
161_D	252_S	1.008	0.46
209_G	462_G	1.007	0.46
461_R	465_K	1.002	0.46
277_R	284_L	1.000	0.46
193_A	289_D	0.998	0.46
394_W	409_F	0.996	0.45
100_E	352_E	0.996	0.45
99_R	138_V	0.995	0.45
21_T	192_V	0.990	0.45
60_L	97_A	0.983	0.45
193_A	196_D	0.979	0.44
171_P	246_F	0.979	0.44
183_A	209_G	0.977	0.44
77_M	269_L	0.976	0.44
137_N	198_P	0.975	0.44
128_A	132_I	0.972	0.44
5_I	24_Q	0.972	0.44
38_R	311_A	0.966	0.43
19_V	57_P	0.964	0.43
207_A	276_L	0.962	0.43
274_T	277_R	0.961	0.43
130_A	142_E	0.954	0.43
169_L	174_W	0.954	0.43
87_E	90_V	0.952	0.43
60_L	66_D	0.945	0.42
360_L	389_D	0.944	0.42
453_I	457_L	0.942	0.42
31_A	243_S	0.942	0.42
271_A	274_T	0.940	0.42
165_N	446_L	0.940	0.42
176_R	234_P	0.937	0.42
87_E	257_T	0.936	0.41
444_P	451_L	0.935	0.41
96_D	99_R	0.935	0.41
156_F	160_R	0.930	0.41
346_N	401_P	0.928	0.41
304_S	439_H	0.925	0.41
82_D	121_D	0.924	0.41
20_R	23_S	0.924	0.41
50_H	61_P	0.924	0.41
264_G	418_R	0.920	0.40
141_T	194_L	0.919	0.40
322_G	326_K	0.919	0.40
15_G	222_F	0.919	0.40
348_I	355_F	0.918	0.40
306_D	389_D	0.918	0.40
281_P	284_L	0.918	0.40
411_M	448_Y	0.917	0.40
163_V	222_F	0.914	0.40
161_D	165_N	0.911	0.40
84_I	121_D	0.908	0.40
143_L	207_A	0.906	0.39
33_A	239_T	0.904	0.39
19_V	31_A	0.903	0.39
241_W	244_V	0.899	0.39
44_L	124_R	0.897	0.39
87_E	327_Q	0.897	0.39
455_A	459_I	0.897	0.39
166_L	174_W	0.893	0.39
376_A	443_M	0.892	0.39
287_F	446_L	0.889	0.38
57_P	96_D	0.887	0.38
130_A	144_R	0.886	0.38
278_A	451_L	0.885	0.38
123_L	269_L	0.881	0.38
199_A	202_H	0.880	0.38
444_P	459_I	0.878	0.38
69_T	90_V	0.872	0.37
334_T	341_L	0.871	0.37
54_L	110_S	0.871	0.37
365_A	378_G	0.869	0.37
134_R	140_V	0.867	0.37
9_G	18_L	0.863	0.37
206_E	271_A	0.863	0.37
52_V	98_L	0.863	0.37
359_I	458_F	0.863	0.37
98_L	101_V	0.861	0.37
322_G	325_A	0.860	0.37
291_V	468_A	0.858	0.36
48_S	227_G	0.857	0.36
213_L	367_M	0.857	0.36
11_S	330_F	0.856	0.36
141_T	201_E	0.855	0.36
71_Y	133_L	0.854	0.36
45_A	192_V	0.853	0.36
376_A	390_A	0.852	0.36
329_G	332_V	0.848	0.36
57_P	367_M	0.847	0.36
254_P	342_W	0.847	0.36
377_K	436_A	0.847	0.36
116_P	267_H	0.846	0.36
23_S	47_V	0.845	0.36
241_W	263_Q	0.845	0.36
27_H	67_I	0.844	0.36
171_P	243_S	0.844	0.36
387_T	401_P	0.843	0.35
5_I	274_T	0.841	0.35
219_F	434_V	0.841	0.35
4_R	67_I	0.839	0.35
162_M	242_I	0.839	0.35
334_T	337_S	0.839	0.35
357_G	437_F	0.837	0.35
285_I	444_P	0.836	0.35
54_L	63_L	0.836	0.35
130_A	239_T	0.835	0.35
193_A	280_I	0.835	0.35
365_A	409_F	0.834	0.35
387_T	398_V	0.833	0.35
347_Q	385_L	0.830	0.35
165_N	248_N	0.829	0.35
205_F	271_A	0.829	0.35
245_W	255_P	0.827	0.34
393_S	438_W	0.827	0.34
409_F	417_G	0.825	0.34
368_D	373_H	0.825	0.34
48_S	106_L	0.824	0.34
158_V	406_T	0.823	0.34
5_I	446_L	0.816	0.34
14_I	71_Y	0.808	0.33
147_I	262_I	0.807	0.33
12_G	18_L	0.807	0.33
94_V	248_N	0.805	0.33
377_K	420_C	0.804	0.33
14_I	70_V	0.803	0.33
424_E	467_I	0.792	0.32
347_Q	352_E	0.792	0.32
380_P	385_L	0.791	0.32
18_L	22_L	0.790	0.32
164_Y	260_A	0.787	0.32
459_I	467_I	0.786	0.32
59_N	62_A	0.786	0.32
143_L	210_P	0.785	0.32
224_A	451_L	0.782	0.32
155_A	207_A	0.781	0.32
206_E	280_I	0.779	0.32
79_E	288_D	0.776	0.31
141_T	146_G	0.775	0.31
139_P	202_H	0.775	0.31
117_H	391_V	0.774	0.31
51_K	216_Q	0.774	0.31
169_L	242_I	0.772	0.31
14_I	24_Q	0.771	0.31
345_V	423_L	0.770	0.31
317_W	416_L	0.770	0.31
189_H	282_Q	0.768	0.31
197_H	279_L	0.766	0.31
238_P	244_V	0.764	0.31
433_D	458_F	0.762	0.31
341_L	344_V	0.761	0.31
418_R	446_L	0.760	0.31
14_I	57_P	0.760	0.31
57_P	61_P	0.759	0.30
173_R	278_A	0.757	0.30
67_I	112_L	0.755	0.30
58_D	99_R	0.753	0.30
17_H	155_A	0.753	0.30
88_R	225_V	0.751	0.30
146_G	327_Q	0.751	0.30
321_Y	324_F	0.751	0.30
137_N	140_V	0.750	0.30
409_F	438_W	0.748	0.30
141_T	199_A	0.746	0.30
228_K	235_I	0.744	0.30
126_R	133_L	0.744	0.30
340_A	404_Q	0.743	0.30
248_N	259_R	0.742	0.29
221_H	229_R	0.738	0.29
103_V	142_E	0.735	0.29
9_G	34_R	0.735	0.29
8_L	32_A	0.733	0.29
123_L	210_P	0.729	0.29
360_L	363_T	0.727	0.29
45_A	97_A	0.725	0.29
95_R	99_R	0.724	0.28
31_A	284_L	0.723	0.28
30_L	342_W	0.723	0.28
63_L	110_S	0.722	0.28
174_W	246_F	0.720	0.28
80_G	363_T	0.719	0.28
158_V	219_F	0.719	0.28
81_G	92_L	0.718	0.28
30_L	451_L	0.717	0.28
161_D	446_L	0.716	0.28
42_L	360_L	0.716	0.28
258_A	367_M	0.716	0.28
11_S	452_M	0.715	0.28
107_I	135_E	0.715	0.28
418_R	437_F	0.715	0.28
180_T	211_E	0.715	0.28
366_L	370_A	0.714	0.28
154_A	435_R	0.714	0.28
377_K	390_A	0.714	0.28
348_I	463_M	0.713	0.28
325_A	328_A	0.712	0.28
233_I	444_P	0.712	0.28
30_L	66_D	0.712	0.28
161_D	214_S	0.710	0.28
411_M	456_H	0.710	0.28
255_P	259_R	0.709	0.28
176_R	444_P	0.709	0.28
166_L	169_L	0.707	0.28
100_E	290_A	0.705	0.27
77_M	446_L	0.705	0.27
15_G	103_V	0.701	0.27
159_M	327_Q	0.701	0.27
276_L	281_P	0.701	0.27
466_Q	469_R	0.700	0.27
325_A	342_W	0.699	0.27
92_L	468_A	0.699	0.27
146_G	260_A	0.699	0.27
147_I	247_L	0.698	0.27
344_V	466_Q	0.697	0.27
186_N	296_K	0.696	0.27
19_V	23_S	0.696	0.27
154_A	261_L	0.695	0.27
290_A	337_S	0.695	0.27
123_L	126_R	0.695	0.27
147_I	218_Q	0.694	0.27
337_S	412_K	0.694	0.27
83_F	91_A	0.694	0.27
187_L	438_W	0.694	0.27
175_V	232_L	0.694	0.27
262_I	301_L	0.692	0.27
70_V	111_S	0.691	0.27
85_A	339_A	0.690	0.27
25_Q	47_V	0.690	0.27
61_P	93_N	0.689	0.27
290_A	347_Q	0.688	0.27
123_L	209_G	0.687	0.26
137_N	202_H	0.687	0.26
247_L	297_E	0.686	0.26
354_Y	365_A	0.685	0.26
192_V	319_P	0.684	0.26
15_G	443_M	0.684	0.26
146_G	179_T	0.682	0.26
225_V	300_K	0.681	0.26
29_I	208_A	0.681	0.26
54_L	269_L	0.680	0.26
70_V	451_L	0.680	0.26
238_P	246_F	0.679	0.26
292_R	389_D	0.679	0.26
136_A	275_A	0.676	0.26
324_F	328_A	0.676	0.26
287_F	334_T	0.674	0.26
302_V	457_L	0.674	0.26
417_G	438_W	0.674	0.26
162_M	246_F	0.673	0.26
171_P	240_R	0.671	0.26
337_S	423_L	0.671	0.26
422_S	432_I	0.670	0.26
176_R	231_W	0.669	0.26
130_A	219_F	0.669	0.26
194_L	276_L	0.665	0.25
264_G	446_L	0.664	0.25
205_F	341_L	0.662	0.25
169_L	175_V	0.661	0.25
245_W	248_N	0.661	0.25
122_H	133_L	0.661	0.25
94_V	133_L	0.659	0.25
40_A	367_M	0.658	0.25
208_A	211_E	0.658	0.25
62_A	351_K	0.656	0.25
236_P	249_V	0.656	0.25
96_D	100_E	0.655	0.25
264_G	332_V	0.652	0.25
38_R	51_K	0.652	0.25
353_R	365_A	0.651	0.25
264_G	355_F	0.649	0.25
107_I	339_A	0.649	0.25
11_S	457_L	0.648	0.24
249_V	367_M	0.648	0.24
241_W	450_L	0.648	0.24
82_D	149_V	0.648	0.24
85_A	382_R	0.647	0.24
376_A	382_R	0.646	0.24
365_A	393_S	0.645	0.24
216_Q	269_L	0.645	0.24
443_M	450_L	0.642	0.24
332_V	434_V	0.642	0.24
78_G	132_I	0.641	0.24
25_Q	212_V	0.641	0.24
351_K	465_K	0.640	0.24
31_A	55_S	0.640	0.24
362_Q	366_L	0.639	0.24
87_E	159_M	0.638	0.24
342_W	346_N	0.638	0.24
24_Q	331_T	0.637	0.24
17_H	23_S	0.637	0.24
210_P	239_T	0.636	0.24
63_L	97_A	0.635	0.24
194_L	271_A	0.635	0.24
79_E	86_Q	0.634	0.24
99_R	104_K	0.632	0.24
240_R	420_C	0.631	0.24
148_I	243_S	0.630	0.24
215_Y	269_L	0.630	0.24
193_A	269_L	0.629	0.24
292_R	371_I	0.629	0.24
198_P	343_Q	0.627	0.23
406_T	420_C	0.627	0.23
427_G	430_R	0.627	0.23
61_P	292_R	0.626	0.23
146_G	239_T	0.626	0.23
58_D	65_Q	0.624	0.23
155_A	158_V	0.624	0.23
111_S	155_A	0.622	0.23
352_E	470_L	0.621	0.23
457_L	467_I	0.621	0.23
403_K	441_H	0.621	0.23
168_V	176_R	0.620	0.23
234_P	239_T	0.618	0.23
275_A	280_I	0.617	0.23
296_K	370_A	0.616	0.23
428_D	469_R	0.616	0.23
116_P	276_L	0.615	0.23
319_P	324_F	0.615	0.23
234_P	243_S	0.614	0.23
97_A	277_R	0.613	0.23
280_I	284_L	0.612	0.23
264_G	324_F	0.610	0.23
49_C	434_V	0.610	0.23
5_I	25_Q	0.610	0.23
449_W	456_H	0.609	0.23
383_E	461_R	0.608	0.23
63_L	235_I	0.606	0.22
5_I	362_Q	0.605	0.22
171_P	233_I	0.605	0.22
341_L	382_R	0.603	0.22
171_P	238_P	0.602	0.22
189_H	285_I	0.601	0.22
226_S	328_A	0.600	0.22
71_Y	360_L	0.596	0.22
422_S	435_R	0.596	0.22
11_S	195_L	0.595	0.22
363_T	447_F	0.594	0.22
213_L	218_Q	0.592	0.22
447_F	469_R	0.591	0.22
209_G	239_T	0.591	0.22
6_L	367_M	0.590	0.22
365_A	410_G	0.589	0.22
276_L	279_L	0.589	0.22
93_N	97_A	0.588	0.22
314_F	317_W	0.587	0.22
279_L	465_K	0.586	0.21
393_S	409_F	0.586	0.21
229_R	233_I	0.584	0.21
31_A	280_I	0.584	0.21
70_V	287_F	0.584	0.21
427_G	469_R	0.583	0.21
338_L	370_A	0.582	0.21
260_A	303_N	0.582	0.21
403_K	424_E	0.582	0.21
345_V	453_I	0.582	0.21
85_A	466_Q	0.581	0.21
118_E	278_A	0.581	0.21
372_G	394_W	0.580	0.21
60_L	337_S	0.580	0.21
171_P	306_D	0.579	0.21
404_Q	413_A	0.578	0.21
194_L	277_R	0.577	0.21
61_P	65_Q	0.576	0.21
278_A	367_M	0.575	0.21
340_A	351_K	0.575	0.21
69_T	363_T	0.574	0.21
418_R	436_A	0.574	0.21
280_I	402_E	0.573	0.21
155_A	184_L	0.571	0.21
9_G	13_Y	0.571	0.21
267_H	393_S	0.569	0.21
453_I	459_I	0.568	0.21
338_L	348_I	0.568	0.21
57_P	101_V	0.568	0.21
49_C	402_E	0.568	0.21
18_L	209_G	0.567	0.21
98_L	102_P	0.567	0.21
29_I	104_K	0.567	0.21
5_I	229_R	0.567	0.21
376_A	413_A	0.566	0.21
195_L	297_E	0.562	0.20
94_V	262_I	0.562	0.20
142_E	204_I	0.561	0.20
54_L	161_D	0.561	0.20
286_A	292_R	0.561	0.20
32_A	60_L	0.561	0.20
100_E	256_T	0.561	0.20
14_I	50_H	0.560	0.20
202_H	275_A	0.560	0.20
13_Y	18_L	0.559	0.20
157_E	160_R	0.558	0.20
252_S	321_Y	0.558	0.20
132_I	135_E	0.557	0.20
146_G	269_L	0.557	0.20
85_A	88_R	0.556	0.20
363_T	467_I	0.556	0.20
245_W	401_P	0.556	0.20
262_I	357_G	0.556	0.20
188_L	302_V	0.555	0.20
164_Y	184_L	0.555	0.20
222_F	226_S	0.554	0.20
84_I	143_L	0.554	0.20
378_G	395_K	0.553	0.20
244_V	248_N	0.552	0.20
30_L	50_H	0.550	0.20
161_D	271_A	0.549	0.20
152_G	157_E	0.549	0.20
203_R	397_I	0.548	0.20
268_D	280_I	0.547	0.20
33_A	301_L	0.547	0.20
29_I	198_P	0.544	0.20
70_V	232_L	0.542	0.20
126_R	129_T	0.541	0.20
210_P	414_P	0.541	0.20
41_K	293_S	0.541	0.20
121_D	306_D	0.541	0.20
368_D	389_D	0.540	0.19
52_V	441_H	0.539	0.19
217_Q	462_G	0.539	0.19
349_G	448_Y	0.538	0.19
105_Q	226_S	0.538	0.19
96_D	270_L	0.538	0.19
39_L	175_V	0.538	0.19
143_L	253_V	0.538	0.19
58_D	363_T	0.537	0.19
243_S	398_V	0.537	0.19
350_G	379_R	0.537	0.19
297_E	410_G	0.536	0.19
169_L	232_L	0.536	0.19
143_L	274_T	0.536	0.19
123_L	127_Q	0.536	0.19
236_P	374_K	0.536	0.19
61_P	99_R	0.536	0.19
170_T	243_S	0.535	0.19
46_N	339_A	0.535	0.19
125_A	129_T	0.535	0.19
190_Y	284_L	0.534	0.19
436_A	458_F	0.533	0.19
180_T	244_V	0.533	0.19
84_I	275_A	0.533	0.19
130_A	175_V	0.533	0.19
74_V	117_H	0.533	0.19
97_A	387_T	0.532	0.19
368_D	411_M	0.531	0.19
68_D	103_V	0.531	0.19
240_R	244_V	0.531	0.19
5_I	27_H	0.529	0.19
28_Q	46_N	0.529	0.19
74_V	179_T	0.527	0.19
220_E	230_R	0.527	0.19
409_F	455_A	0.525	0.19
178_R	213_L	0.524	0.19
180_T	269_L	0.523	0.19
80_G	110_S	0.523	0.19
422_S	427_G	0.523	0.19
119_Q	395_K	0.522	0.19
185_E	303_N	0.522	0.19
36_V	52_V	0.522	0.19
147_I	161_D	0.522	0.19
189_H	283_R	0.520	0.19
198_P	340_A	0.520	0.19
57_P	217_Q	0.519	0.19
350_G	353_R	0.519	0.19
111_S	162_M	0.519	0.19
73_L	261_L	0.519	0.19
223_M	373_H	0.518	0.19
212_V	290_A	0.518	0.19
416_L	433_D	0.517	0.18
410_G	455_A	0.517	0.18
124_R	362_Q	0.516	0.18
146_G	330_F	0.516	0.18
190_Y	276_L	0.516	0.18
244_V	259_R	0.515	0.18
29_I	367_M	0.515	0.18
47_V	464_A	0.515	0.18
151_A	185_E	0.515	0.18
11_S	319_P	0.515	0.18
223_M	287_F	0.514	0.18
37_D	351_K	0.514	0.18
107_I	127_Q	0.514	0.18
214_S	389_D	0.513	0.18
61_P	103_V	0.513	0.18
122_H	145_A	0.513	0.18
4_R	104_K	0.513	0.18
14_I	94_V	0.513	0.18
180_T	271_A	0.512	0.18
149_V	260_A	0.511	0.18
393_S	417_G	0.511	0.18
37_D	40_A	0.511	0.18
339_A	348_I	0.510	0.18
121_D	249_V	0.509	0.18
328_A	439_H	0.509	0.18
324_F	397_I	0.508	0.18
361_W	456_H	0.508	0.18
146_G	266_K	0.508	0.18
155_A	365_A	0.507	0.18
154_A	206_E	0.507	0.18
76_S	125_A	0.506	0.18
177_S	269_L	0.505	0.18
244_V	269_L	0.503	0.18
111_S	125_A	0.502	0.18
378_G	410_G	0.501	0.18
413_A	438_W	0.501	0.18
174_W	243_S	0.500	0.18
374_K	378_G	0.500	0.18
107_I	270_L	0.500	0.18

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2x4gA	2	0.5735	100	0.765	Contact Map
3wj7A	3	0.6239	100	0.769	Contact Map
3m2pA	2	0.5756	100	0.777	Contact Map
2zcuA	2	0.5651	100	0.78	Contact Map
2jl1A	2	0.5903	100	0.781	Contact Map
2pzmA	2	0.5987	100	0.783	Contact Map
3rufA	2	0.584	100	0.786	Contact Map
2q1sA	2	0.6071	100	0.786	Contact Map
2c5aA	2	0.6513	100	0.787	Contact Map
1sb8A	2	0.5945	100	0.787	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0131 seconds.