PTMCB - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

PTMCB - PTS system mannitol-specific cryptic EIICB component

UniProt:	P69826	Sequences: MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11792
Length:	462 (454)
Sequences:	573 (362)
Seq/√Len:	17.0

ECOLI - PTMCB PTM3C
BACSU - PTMCB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
280_S	322_V	5.906	1.00
276_A	330_I	5.766	1.00
228_L	274_M	5.086	1.00
182_N	218_V	4.868	1.00
285_F	319_G	4.566	1.00
54_G	58_T	4.544	1.00
182_N	199_Y	4.039	1.00
393_K	397_K	3.945	1.00
66_G	86_T	3.876	1.00
179_S	279_M	3.824	1.00
115_V	119_L	3.705	1.00
114_Y	117_K	3.586	1.00
217_M	304_Y	3.427	0.99
179_S	282_T	3.404	0.99
187_V	264_V	3.354	0.99
426_E	439_L	3.351	0.99
290_G	316_T	3.349	0.99
273_A	331_T	3.283	0.99
49_F	145_L	3.164	0.99
81_M	136_L	3.157	0.99
288_L	315_A	3.087	0.99
305_L	317_I	3.068	0.99
285_F	290_G	2.969	0.99
372_R	415_D	2.958	0.98
111_V	139_A	2.926	0.98
37_L	44_L	2.908	0.98
115_V	139_A	2.863	0.98
269_L	334_I	2.767	0.98
167_E	171_H	2.736	0.97
199_Y	218_V	2.649	0.97
249_I	253_L	2.631	0.97
436_P	455_Q	2.591	0.96
67_S	71_H	2.521	0.96
108_G	112_I	2.448	0.95
220_S	304_Y	2.434	0.95
308_T	313_F	2.433	0.95
39_I	53_V	2.411	0.95
373_I	395_L	2.396	0.94
284_M	322_V	2.333	0.94
349_F	357_K	2.218	0.92
329_A	333_L	2.212	0.92
426_E	437_L	2.198	0.91
325_L	329_A	2.174	0.91
200_Y	295_G	2.155	0.90
296_P	304_Y	2.150	0.90
290_G	315_A	2.145	0.90
220_S	296_P	2.127	0.90
33_F	141_M	2.091	0.89
180_V	275_I	2.076	0.89
52_I	91_V	2.052	0.88
267_K	338_E	2.048	0.88
448_K	451_T	2.046	0.88
187_V	274_M	1.974	0.86
49_F	149_E	1.970	0.86
28_F	61_L	1.916	0.84
272_I	276_A	1.902	0.84
71_H	76_K	1.879	0.83
41_T	297_S	1.857	0.82
67_S	76_K	1.843	0.82
19_A	72_L	1.835	0.81
109_G	112_I	1.832	0.81
305_L	313_F	1.817	0.81
290_G	312_S	1.815	0.81
245_P	248_M	1.777	0.79
271_I	274_M	1.761	0.79
352_S	356_V	1.760	0.79
354_N	359_M	1.755	0.78
333_L	337_M	1.748	0.78
75_G	79_A	1.744	0.78
418_I	452_L	1.724	0.77
270_T	331_T	1.715	0.77
395_L	400_L	1.705	0.76
138_I	142_L	1.702	0.76
85_G	104_M	1.694	0.76
34_I	52_I	1.694	0.76
398_A	453_F	1.657	0.74
61_L	98_F	1.654	0.74
81_M	112_I	1.652	0.74
125_A	389_T	1.630	0.73
168_A	172_A	1.594	0.71
312_S	315_A	1.586	0.71
305_L	308_T	1.571	0.70
413_P	416_A	1.541	0.68
163_K	198_V	1.539	0.68
288_L	318_A	1.538	0.68
220_S	295_G	1.532	0.68
349_F	356_V	1.520	0.67
200_Y	204_M	1.514	0.67
104_M	147_G	1.512	0.67
391_F	449_L	1.481	0.65
370_V	418_I	1.478	0.65
251_H	324_T	1.474	0.65
279_M	282_T	1.469	0.65
7_R	360_K	1.463	0.64
446_D	449_L	1.454	0.64
406_H	437_L	1.430	0.62
228_L	270_T	1.425	0.62
394_R	450_D	1.424	0.62
81_M	108_G	1.422	0.62
390_T	444_I	1.416	0.62
115_V	135_S	1.415	0.62
311_G	317_I	1.397	0.61
187_V	271_I	1.396	0.61
204_M	216_F	1.379	0.60
82_G	108_G	1.375	0.59
301_I	320_V	1.358	0.58
217_M	316_T	1.352	0.58
444_I	452_L	1.346	0.58
418_I	438_I	1.344	0.58
40_P	47_E	1.342	0.57
313_F	317_I	1.334	0.57
233_T	248_M	1.330	0.57
264_V	274_M	1.330	0.57
74_G	109_G	1.303	0.55
204_M	208_S	1.294	0.55
353_A	356_V	1.291	0.54
350_A	353_A	1.291	0.54
293_V	310_K	1.289	0.54
202_L	264_V	1.287	0.54
216_F	294_A	1.279	0.54
76_K	79_A	1.275	0.53
74_G	118_A	1.275	0.53
354_N	358_A	1.273	0.53
334_I	337_M	1.267	0.53
233_T	245_P	1.254	0.52
395_L	406_H	1.245	0.52
15_G	215_F	1.234	0.51
281_G	323_G	1.231	0.51
350_A	354_N	1.231	0.51
449_L	453_F	1.229	0.51
13_F	16_F	1.228	0.51
228_L	264_V	1.224	0.50
311_G	319_G	1.217	0.50
181_I	198_V	1.209	0.50
9_K	12_A	1.200	0.49
406_H	439_L	1.199	0.49
142_L	146_L	1.197	0.49
170_V	206_Q	1.182	0.48
84_I	140_G	1.178	0.48
248_M	253_L	1.178	0.48
47_E	51_K	1.175	0.48
38_F	42_G	1.173	0.47
33_F	138_I	1.172	0.47
308_T	315_A	1.154	0.46
48_H	149_E	1.148	0.46
203_G	216_F	1.146	0.46
217_M	220_S	1.132	0.45
130_V	195_D	1.123	0.44
48_H	148_F	1.118	0.44
147_G	181_I	1.116	0.44
352_S	357_K	1.114	0.44
195_D	200_Y	1.113	0.44
15_G	440_I	1.112	0.44
67_S	79_A	1.111	0.44
196_Q	200_Y	1.100	0.43
8_A	427_G	1.097	0.43
391_F	394_R	1.097	0.43
22_I	196_Q	1.090	0.42
395_L	404_V	1.087	0.42
349_F	352_S	1.082	0.42
412_V	416_A	1.081	0.42
302_F	306_A	1.079	0.42
95_I	159_N	1.076	0.42
394_R	446_D	1.073	0.42
25_I	263_Y	1.060	0.41
406_H	426_E	1.056	0.41
183_E	225_G	1.046	0.40
413_P	434_D	1.046	0.40
236_G	240_S	1.045	0.40
95_I	155_V	1.044	0.40
127_F	249_I	1.028	0.39
108_G	142_L	1.025	0.39
26_G	133_N	1.022	0.39
159_N	205_Q	1.017	0.38
173_G	412_V	1.017	0.38
350_A	360_K	1.012	0.38
349_F	353_A	1.011	0.38
220_S	285_F	1.008	0.38
272_I	279_M	1.005	0.38
60_L	83_G	1.005	0.38
63_V	87_I	1.001	0.37
81_M	440_I	0.999	0.37
390_T	453_F	0.998	0.37
12_A	396_E	0.995	0.37
209_V	220_S	0.995	0.37
393_K	445_G	0.994	0.37
68_T	76_K	0.988	0.37
232_F	441_N	0.986	0.37
350_A	359_M	0.985	0.37
267_K	335_L	0.985	0.37
218_V	282_T	0.984	0.36
112_I	136_L	0.984	0.36
406_H	409_I	0.982	0.36
228_L	331_T	0.982	0.36
226_L	248_M	0.981	0.36
7_R	400_L	0.977	0.36
183_E	222_P	0.975	0.36
440_I	448_K	0.972	0.36
394_R	449_L	0.970	0.36
274_M	278_G	0.970	0.36
42_G	45_P	0.970	0.36
22_I	195_D	0.968	0.36
264_V	418_I	0.963	0.35
312_S	316_T	0.962	0.35
230_L	324_T	0.962	0.35
169_L	172_A	0.961	0.35
319_G	375_F	0.961	0.35
232_F	267_K	0.957	0.35
178_L	182_N	0.955	0.35
309_P	312_S	0.951	0.35
18_T	387_G	0.949	0.35
408_A	411_N	0.948	0.34
283_W	287_L	0.947	0.34
182_N	219_A	0.947	0.34
225_G	257_H	0.946	0.34
252_F	320_V	0.944	0.34
38_F	45_P	0.940	0.34
120_E	413_P	0.938	0.34
72_L	402_I	0.936	0.34
294_A	307_L	0.934	0.34
205_Q	215_F	0.934	0.34
178_L	279_M	0.929	0.33
395_L	456_L	0.927	0.33
222_P	225_G	0.926	0.33
35_T	50_A	0.923	0.33
398_A	449_L	0.922	0.33
423_A	441_N	0.918	0.33
280_S	325_L	0.916	0.33
228_L	324_T	0.913	0.33
28_F	96_P	0.912	0.33
85_G	108_G	0.911	0.33
270_T	273_A	0.910	0.32
349_F	359_M	0.910	0.32
112_I	115_V	0.906	0.32
334_I	338_E	0.905	0.32
202_L	205_Q	0.904	0.32
390_T	449_L	0.903	0.32
275_I	279_M	0.903	0.32
280_S	326_V	0.902	0.32
420_V	426_E	0.897	0.32
195_D	443_Y	0.896	0.32
27_A	80_V	0.892	0.32
318_A	322_V	0.892	0.32
183_E	257_H	0.892	0.32
288_L	312_S	0.891	0.31
248_M	264_V	0.890	0.31
81_M	109_G	0.890	0.31
103_I	122_R	0.889	0.31
406_H	443_Y	0.889	0.31
145_L	149_E	0.887	0.31
154_A	370_V	0.887	0.31
34_I	96_P	0.885	0.31
122_R	394_R	0.884	0.31
393_K	433_T	0.883	0.31
182_N	282_T	0.881	0.31
335_L	339_K	0.881	0.31
112_I	139_A	0.879	0.31
75_G	104_M	0.875	0.31
267_K	448_K	0.874	0.31
391_F	453_F	0.872	0.30
417_D	451_T	0.871	0.30
19_A	440_I	0.871	0.30
119_L	122_R	0.867	0.30
166_I	178_L	0.863	0.30
69_G	72_L	0.861	0.30
374_A	403_E	0.860	0.30
52_I	148_F	0.859	0.30
304_Y	308_T	0.855	0.30
280_S	284_M	0.855	0.30
38_F	43_W	0.854	0.30
123_I	132_N	0.853	0.30
142_L	145_L	0.853	0.30
26_G	251_H	0.849	0.29
372_R	403_E	0.846	0.29
334_I	440_I	0.845	0.29
312_S	319_G	0.845	0.29
21_V	84_I	0.844	0.29
35_T	92_G	0.844	0.29
110_L	287_L	0.843	0.29
222_P	257_H	0.840	0.29
183_E	186_K	0.835	0.29
186_K	222_P	0.834	0.29
117_K	120_E	0.831	0.28
109_G	143_L	0.827	0.28
30_A	84_I	0.826	0.28
66_G	90_I	0.820	0.28
97_M	428_R	0.819	0.28
205_Q	209_V	0.819	0.28
16_F	72_L	0.819	0.28
164_E	198_V	0.818	0.28
322_V	325_L	0.818	0.28
350_A	358_A	0.818	0.28
177_L	279_M	0.816	0.28
414_A	418_I	0.815	0.28
43_W	253_L	0.813	0.28
288_L	316_T	0.811	0.27
308_T	314_L	0.810	0.27
308_T	316_T	0.809	0.27
8_A	15_G	0.808	0.27
98_F	127_F	0.807	0.27
427_G	430_K	0.805	0.27
7_R	237_K	0.805	0.27
334_I	396_E	0.804	0.27
204_M	302_F	0.804	0.27
180_V	279_M	0.803	0.27
43_W	305_L	0.803	0.27
353_A	357_K	0.802	0.27
278_G	281_G	0.802	0.27
157_I	161_F	0.799	0.27
236_G	335_L	0.798	0.27
215_F	267_K	0.797	0.27
204_M	294_A	0.795	0.27
50_A	96_P	0.793	0.27
444_I	448_K	0.793	0.27
186_K	225_G	0.792	0.27
228_L	327_S	0.790	0.27
285_F	316_T	0.786	0.26
43_W	293_V	0.786	0.26
127_F	253_L	0.784	0.26
103_I	330_I	0.782	0.26
25_I	29_I	0.781	0.26
285_F	318_A	0.781	0.26
181_I	371_K	0.777	0.26
253_L	302_F	0.776	0.26
181_I	264_V	0.775	0.26
74_G	139_A	0.772	0.26
353_A	359_M	0.766	0.25
419_V	435_K	0.766	0.25
414_A	434_D	0.765	0.25
420_V	456_L	0.764	0.25
214_I	319_G	0.764	0.25
173_G	302_F	0.764	0.25
309_P	317_I	0.763	0.25
21_V	440_I	0.760	0.25
7_R	204_M	0.757	0.25
203_G	214_I	0.757	0.25
66_G	83_G	0.756	0.25
20_M	23_P	0.755	0.25
119_L	131_I	0.753	0.25
352_S	355_A	0.752	0.25
454_N	457_T	0.751	0.25
43_W	310_K	0.751	0.25
53_V	273_A	0.749	0.25
273_A	330_I	0.749	0.25
15_G	18_T	0.749	0.25
391_F	410_E	0.748	0.25
158_A	162_V	0.744	0.24
429_V	443_Y	0.744	0.24
220_S	311_G	0.743	0.24
446_D	453_F	0.742	0.24
111_V	145_L	0.741	0.24
195_D	220_S	0.740	0.24
146_L	151_I	0.739	0.24
409_I	437_L	0.737	0.24
125_A	253_L	0.733	0.24
77_R	134_F	0.731	0.24
267_K	339_K	0.728	0.24
438_I	452_L	0.725	0.24
146_L	150_V	0.723	0.24
186_K	257_H	0.723	0.24
315_A	424_S	0.722	0.23
12_A	402_I	0.722	0.23
308_T	332_S	0.721	0.23
392_R	427_G	0.720	0.23
200_Y	215_F	0.719	0.23
204_M	305_L	0.718	0.23
195_D	219_A	0.718	0.23
294_A	319_G	0.717	0.23
406_H	420_V	0.717	0.23
122_R	373_I	0.717	0.23
63_V	187_V	0.715	0.23
426_E	430_K	0.715	0.23
334_I	442_N	0.714	0.23
394_R	398_A	0.713	0.23
370_V	435_K	0.712	0.23
74_G	112_I	0.712	0.23
297_S	444_I	0.712	0.23
391_F	446_D	0.711	0.23
73_V	79_A	0.711	0.23
28_F	58_T	0.710	0.23
343_T	354_N	0.709	0.23
274_M	327_S	0.709	0.23
51_K	149_E	0.708	0.23
22_I	443_Y	0.706	0.23
54_G	303_A	0.703	0.23
232_F	266_M	0.703	0.23
117_K	241_K	0.703	0.23
240_S	295_G	0.702	0.23
95_I	202_L	0.701	0.23
392_R	406_H	0.701	0.23
107_L	110_L	0.699	0.22
296_P	302_F	0.698	0.22
41_T	303_A	0.698	0.22
202_L	215_F	0.697	0.22
20_M	31_W	0.695	0.22
142_L	371_K	0.692	0.22
418_I	436_P	0.689	0.22
283_W	286_N	0.689	0.22
51_K	56_M	0.688	0.22
272_I	333_L	0.688	0.22
402_I	418_I	0.688	0.22
74_G	119_L	0.687	0.22
15_G	393_K	0.685	0.22
75_G	107_L	0.685	0.22
217_M	390_T	0.685	0.22
335_L	338_E	0.683	0.22
35_T	96_P	0.682	0.22
10_V	375_F	0.679	0.22
170_V	282_T	0.678	0.22
349_F	418_I	0.676	0.22
394_R	453_F	0.676	0.22
285_F	304_Y	0.675	0.22
154_A	158_A	0.675	0.22
280_S	317_I	0.675	0.22
402_I	444_I	0.674	0.21
196_Q	295_G	0.674	0.21
237_K	373_I	0.673	0.21
309_P	318_A	0.673	0.21
8_A	441_N	0.673	0.21
438_I	447_P	0.672	0.21
23_P	31_W	0.670	0.21
79_A	121_K	0.670	0.21
115_V	206_Q	0.669	0.21
219_A	259_L	0.669	0.21
413_P	452_L	0.669	0.21
147_G	159_N	0.668	0.21
29_I	263_Y	0.668	0.21
138_I	265_L	0.667	0.21
99_L	301_I	0.667	0.21
156_L	159_N	0.667	0.21
406_H	412_V	0.665	0.21
287_L	371_K	0.664	0.21
178_L	199_Y	0.663	0.21
412_V	440_I	0.663	0.21
441_N	446_D	0.663	0.21
135_S	246_G	0.663	0.21
217_M	412_V	0.662	0.21
160_T	302_F	0.661	0.21
121_K	124_P	0.661	0.21
8_A	109_G	0.660	0.21
410_E	446_D	0.660	0.21
420_V	437_L	0.660	0.21
169_L	178_L	0.659	0.21
28_F	49_F	0.658	0.21
109_G	169_L	0.657	0.21
212_K	312_S	0.657	0.21
207_A	210_N	0.657	0.21
48_H	51_K	0.655	0.21
82_G	392_R	0.655	0.21
185_A	228_L	0.654	0.21
34_I	141_M	0.654	0.21
281_G	439_L	0.654	0.21
99_L	284_M	0.653	0.21
304_Y	309_P	0.653	0.21
343_T	346_E	0.651	0.21
162_V	194_I	0.650	0.21
104_M	107_L	0.649	0.20
374_A	405_K	0.648	0.20
93_A	150_V	0.647	0.20
180_V	318_A	0.646	0.20
169_L	203_G	0.646	0.20
421_T	439_L	0.645	0.20
154_A	418_I	0.645	0.20
409_I	432_V	0.644	0.20
24_N	88_G	0.643	0.20
67_S	218_V	0.643	0.20
237_K	338_E	0.643	0.20
279_M	283_W	0.643	0.20
119_L	139_A	0.642	0.20
420_V	452_L	0.642	0.20
280_S	288_L	0.642	0.20
74_G	440_I	0.641	0.20
235_F	332_S	0.640	0.20
79_A	358_A	0.640	0.20
217_M	445_G	0.639	0.20
151_I	322_V	0.635	0.20
40_P	51_K	0.634	0.20
166_I	219_A	0.632	0.20
170_V	178_L	0.631	0.20
39_I	303_A	0.631	0.20
276_A	333_L	0.631	0.20
241_K	402_I	0.630	0.20
143_L	456_L	0.630	0.20
215_F	389_T	0.630	0.20
292_L	296_P	0.629	0.20
302_F	307_L	0.628	0.20
279_M	326_V	0.628	0.20
162_V	416_A	0.627	0.20
75_G	407_Y	0.627	0.20
285_F	295_G	0.626	0.20
6_A	13_F	0.625	0.20
66_G	147_G	0.624	0.20
118_A	164_E	0.623	0.19
52_I	284_M	0.623	0.19
304_Y	319_G	0.621	0.19
162_V	427_G	0.620	0.19
121_K	242_R	0.619	0.19
89_V	104_M	0.619	0.19
119_L	316_T	0.619	0.19
178_L	283_W	0.618	0.19
218_V	294_A	0.617	0.19
354_N	360_K	0.617	0.19
392_R	412_V	0.616	0.19
304_Y	320_V	0.616	0.19
454_N	458_A	0.614	0.19
217_M	296_P	0.614	0.19
53_V	303_A	0.614	0.19
114_Y	396_E	0.614	0.19
46_N	50_A	0.612	0.19
165_C	241_K	0.611	0.19
429_V	435_K	0.611	0.19
304_Y	324_T	0.611	0.19
203_G	264_V	0.610	0.19
74_G	390_T	0.610	0.19
124_P	253_L	0.606	0.19
33_F	420_V	0.606	0.19
66_G	149_E	0.605	0.19
96_P	188_L	0.603	0.19
65_I	193_A	0.603	0.19
421_T	426_E	0.602	0.19
302_F	422_H	0.602	0.19
155_V	281_G	0.602	0.19
389_T	440_I	0.601	0.19
348_E	356_V	0.601	0.19
296_P	311_G	0.600	0.19
149_E	187_V	0.599	0.19
15_G	441_N	0.598	0.19
19_A	141_M	0.596	0.18
136_L	144_C	0.596	0.18
139_A	144_C	0.595	0.18
10_V	187_V	0.593	0.18
248_M	335_L	0.591	0.18
72_L	295_G	0.590	0.18
367_L	436_P	0.589	0.18
316_T	451_T	0.589	0.18
26_G	115_V	0.588	0.18
143_L	288_L	0.588	0.18
46_N	310_K	0.587	0.18
7_R	395_L	0.587	0.18
91_V	96_P	0.587	0.18
56_M	84_I	0.584	0.18
405_K	441_N	0.583	0.18
390_T	446_D	0.583	0.18
119_L	123_I	0.583	0.18
160_T	164_E	0.583	0.18
160_T	163_K	0.583	0.18
372_R	420_V	0.583	0.18
73_V	118_A	0.583	0.18
57_I	96_P	0.579	0.18
24_N	68_T	0.578	0.18
166_I	349_F	0.578	0.18
84_I	109_G	0.577	0.18
186_K	281_G	0.576	0.18
309_P	313_F	0.575	0.18
61_L	296_P	0.574	0.18
15_G	235_F	0.573	0.18
151_I	188_L	0.572	0.18
271_I	417_D	0.572	0.18
218_V	375_F	0.572	0.18
51_K	318_A	0.572	0.18
180_V	185_A	0.571	0.18
233_T	240_S	0.571	0.18
8_A	410_E	0.570	0.18
282_T	323_G	0.570	0.18
368_S	434_D	0.569	0.18
99_L	141_M	0.569	0.18
33_F	207_A	0.568	0.17
75_G	89_V	0.568	0.17
181_I	244_A	0.567	0.17
75_G	335_L	0.566	0.17
273_A	332_S	0.566	0.17
319_G	444_I	0.564	0.17
15_G	448_K	0.564	0.17
114_Y	146_L	0.564	0.17
306_A	309_P	0.563	0.17
358_A	362_E	0.563	0.17
319_G	372_R	0.562	0.17
377_C	383_S	0.562	0.17
41_T	302_F	0.561	0.17
166_I	215_F	0.561	0.17
75_G	358_A	0.560	0.17
98_F	399_G	0.560	0.17
226_L	251_H	0.559	0.17
295_G	323_G	0.559	0.17
52_I	412_V	0.559	0.17
154_A	296_P	0.559	0.17
115_V	140_G	0.556	0.17
112_I	395_L	0.556	0.17
91_V	95_I	0.555	0.17
343_T	359_M	0.554	0.17
365_F	373_I	0.553	0.17
399_G	444_I	0.552	0.17
181_I	333_L	0.550	0.17
93_A	156_L	0.550	0.17
236_G	342_E	0.550	0.17
270_T	443_Y	0.549	0.17
217_M	238_G	0.549	0.17
48_H	145_L	0.549	0.17
215_F	391_F	0.548	0.17
170_V	173_G	0.548	0.17
438_I	455_Q	0.547	0.17
66_G	82_G	0.547	0.17
110_L	322_V	0.546	0.17
162_V	181_I	0.543	0.17
228_L	259_L	0.542	0.17
8_A	215_F	0.540	0.17
278_G	282_T	0.540	0.17
76_K	159_N	0.540	0.17
391_F	420_V	0.539	0.17
421_T	437_L	0.539	0.17
295_G	319_G	0.539	0.17
307_L	410_E	0.539	0.17
187_V	445_G	0.539	0.17
288_L	314_L	0.536	0.16
228_L	272_I	0.536	0.16
84_I	358_A	0.535	0.16
380_G	383_S	0.535	0.16
89_V	100_G	0.535	0.16
9_K	441_N	0.535	0.16
52_I	416_A	0.535	0.16
33_F	265_L	0.535	0.16
98_F	419_V	0.535	0.16
81_M	140_G	0.533	0.16
241_K	372_R	0.533	0.16
198_V	340_T	0.533	0.16
111_V	121_K	0.533	0.16
388_A	406_H	0.532	0.16
403_E	417_D	0.531	0.16
94_E	149_E	0.530	0.16
56_M	63_V	0.529	0.16
350_A	357_K	0.529	0.16
391_F	429_V	0.528	0.16
394_R	439_L	0.528	0.16
110_L	282_T	0.528	0.16
285_F	293_V	0.528	0.16
17_L	69_G	0.527	0.16
12_A	440_I	0.527	0.16
290_G	319_G	0.527	0.16
123_I	234_L	0.526	0.16
417_D	424_S	0.525	0.16
316_T	319_G	0.524	0.16
46_N	49_F	0.524	0.16
272_I	362_E	0.524	0.16
15_G	410_E	0.522	0.16
362_E	427_G	0.520	0.16
396_E	401_A	0.519	0.16
235_F	411_N	0.519	0.16
352_S	444_I	0.518	0.16
393_K	396_E	0.517	0.16
141_M	145_L	0.517	0.16
146_L	371_K	0.517	0.16
199_Y	215_F	0.517	0.16
395_L	412_V	0.516	0.16
303_A	326_V	0.515	0.16
446_D	452_L	0.514	0.16
207_A	251_H	0.514	0.16
12_A	202_L	0.513	0.16
252_F	284_M	0.512	0.16
39_I	45_P	0.511	0.16
389_T	457_T	0.511	0.16
326_V	333_L	0.511	0.16
124_P	139_A	0.511	0.16
34_I	50_A	0.509	0.16
440_I	449_L	0.509	0.16
416_A	434_D	0.509	0.16
28_F	133_N	0.508	0.16
352_S	358_A	0.508	0.16
26_G	152_G	0.507	0.15
56_M	96_P	0.507	0.15
346_E	352_S	0.506	0.15
218_V	285_F	0.506	0.15
84_I	112_I	0.506	0.15
264_V	271_I	0.505	0.15
426_E	429_V	0.504	0.15
119_L	407_Y	0.503	0.15
392_R	403_E	0.502	0.15
234_L	287_L	0.502	0.15
424_S	440_I	0.501	0.15
215_F	446_D	0.501	0.15
214_I	239_M	0.500	0.15
8_A	390_T	0.500	0.15

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qnqA	2	0.7576	99.9	0.874	Contact Map
1vkrA	1	0.2056	99.8	0.91	Contact Map
3czcA	1	0.1926	99.4	0.93	Contact Map
1tvmA	1	0.2381	99.3	0.933	Contact Map
1e2bA	1	0.2035	99.2	0.936	Contact Map
2l2qA	1	0.2056	99	0.941	Contact Map
4mgeA	3	0.197	99	0.941	Contact Map
3nbmA	1	0.1905	98.6	0.95	Contact Map
4tn5A	2	0.1991	98	0.958	Contact Map
2kyrA	1	0.2013	97.9	0.959	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.013 seconds.