FLII - ECOLI - GREMLIN Contacts

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FLII - Flagellum-specific ATP synthase

UniProt:	P52612	Sequences: MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLERIFPTVS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG20266
Length:	457 (408)
Sequences:	7959 (2819)
Seq/√Len:	139.5

ECOLI - FLII ATPA ATPB RHO
BACSU - FLII ATPA ATPB RHO
HALSA - VATB VATA
SULSO - VATB VATA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
122_D	126_K	7.695	1.00
174_R	266_H	4.935	1.00
207_G	253_A	4.500	1.00
354_S	367_D	4.301	1.00
41_A	79_L	3.749	1.00
165_P	366_I	3.431	1.00
391_F	428_L	3.259	1.00
50_A	96_A	2.988	1.00
119_R	129_D	2.885	1.00
52_C	79_L	2.858	1.00
67_S	79_L	2.844	1.00
106_S	109_Q	2.830	1.00
441_D	444_A	2.825	1.00
114_P	265_Q	2.659	1.00
53_V	64_E	2.565	1.00
254_T	326_Y	2.532	1.00
157_H	174_R	2.526	1.00
46_L	69_V	2.483	1.00
172_V	325_F	2.472	1.00
205_V	257_A	2.463	1.00
109_Q	139_T	2.368	1.00
52_C	94_V	2.345	1.00
257_A	322_I	2.335	1.00
226_A	230_A	2.319	1.00
380_I	385_Y	2.316	1.00
121_L	256_I	2.315	1.00
382_E	386_A	2.276	1.00
115_A	137_T	2.271	1.00
164_R	440_A	2.269	1.00
399_Q	402_R	2.250	1.00
190_V	436_I	2.241	1.00
390_T	393_Q	2.205	1.00
40_E	76_R	2.173	1.00
53_V	95_Y	2.126	1.00
414_S	417_M	2.094	1.00
235_I	256_I	2.091	1.00
217_K	221_E	2.061	1.00
335_Q	352_V	2.039	1.00
357_L	362_H	2.032	1.00
33_R	40_E	2.011	1.00
41_A	94_V	2.008	1.00
425_W	429_E	2.003	1.00
140_G	144_T	1.974	1.00
227_E	230_A	1.957	1.00
390_T	420_K	1.939	1.00
47_P	50_A	1.925	1.00
169_L	391_F	1.912	1.00
183_G	186_V	1.895	1.00
31_L	88_V	1.891	1.00
258_E	311_R	1.882	1.00
54_I	67_S	1.851	1.00
32_T	42_T	1.826	1.00
168_A	445_S	1.826	1.00
28_Y	93_R	1.799	1.00
405_V	422_I	1.788	1.00
168_A	431_Y	1.782	1.00
220_I	234_V	1.769	1.00
362_H	433_Q	1.760	1.00
172_V	351_I	1.759	1.00
413_G	417_M	1.748	1.00
402_R	406_S	1.747	1.00
140_G	259_D	1.731	1.00
140_G	255_R	1.712	1.00
160_D	167_N	1.710	1.00
233_V	256_I	1.705	1.00
362_H	429_E	1.696	1.00
221_E	224_L	1.671	1.00
360_A	429_E	1.650	1.00
361_G	389_R	1.645	1.00
221_E	225_G	1.637	1.00
27_R	96_A	1.635	1.00
119_R	131_L	1.624	1.00
328_V	343_A	1.617	1.00
131_L	224_L	1.609	1.00
50_A	105_Q	1.609	1.00
203_V	233_V	1.582	1.00
203_V	265_Q	1.573	1.00
381_S	384_H	1.558	1.00
166_I	351_I	1.540	1.00
53_V	66_E	1.530	1.00
121_L	235_I	1.518	1.00
266_H	321_S	1.505	1.00
171_T	376_M	1.503	1.00
41_A	44_L	1.499	1.00
205_V	256_I	1.492	1.00
114_P	259_D	1.479	1.00
119_R	132_P	1.478	1.00
127_P	132_P	1.465	1.00
179_G	347_L	1.465	1.00
110_L	256_I	1.464	1.00
203_V	260_F	1.461	1.00
387_R	450_E	1.451	1.00
108_K	142_L	1.448	1.00
166_I	195_M	1.444	1.00
314_N	317_S	1.443	1.00
435_G	438_E	1.440	1.00
55_E	93_R	1.440	1.00
423_A	426_P	1.436	1.00
178_M	325_F	1.425	1.00
207_G	271_M	1.422	1.00
114_P	263_R	1.417	1.00
376_M	388_V	1.405	1.00
116_L	256_I	1.404	1.00
241_V	245_L	1.400	1.00
360_A	402_R	1.362	1.00
115_A	135_D	1.357	1.00
55_E	95_Y	1.353	1.00
65_V	83_E	1.351	1.00
222_N	378_A	1.346	1.00
111_P	139_T	1.346	1.00
209_I	249_G	1.345	1.00
250_A	308_L	1.344	1.00
259_D	263_R	1.341	1.00
55_E	64_E	1.341	1.00
52_C	67_S	1.304	1.00
337_D	340_A	1.301	1.00
420_K	424_L	1.293	1.00
119_R	127_P	1.291	1.00
267_V	322_I	1.289	1.00
208_L	216_V	1.284	1.00
225_G	228_G	1.284	1.00
254_T	312_A	1.282	1.00
275_T	279_M	1.279	1.00
31_L	92_A	1.277	1.00
340_A	352_V	1.270	1.00
122_D	241_V	1.269	1.00
430_G	433_Q	1.259	1.00
46_L	77_L	1.258	1.00
397_S	400_R	1.256	1.00
389_R	392_K	1.253	1.00
281_Q	304_K	1.253	1.00
151_Q	318_G	1.252	1.00
30_R	93_R	1.249	1.00
309_V	346_I	1.248	1.00
155_I	173_G	1.238	1.00
305_L	343_A	1.226	1.00
32_T	76_R	1.226	1.00
377_T	385_Y	1.221	1.00
381_S	442_W	1.219	1.00
46_L	52_C	1.218	1.00
170_L	351_I	1.216	1.00
444_A	448_G	1.215	1.00
140_G	262_D	1.214	1.00
385_Y	389_R	1.207	1.00
53_V	104_L	1.206	1.00
224_L	229_R	1.204	1.00
115_A	136_T	1.202	1.00
56_R	65_V	1.199	1.00
161_T	172_V	1.195	1.00
106_S	139_T	1.193	1.00
178_M	349_G	1.191	1.00
117_L	203_V	1.189	1.00
393_Q	417_M	1.186	1.00
138_E	263_R	1.184	1.00
190_V	437_F	1.177	1.00
34_A	88_V	1.176	1.00
356_R	359_E	1.172	1.00
30_R	42_T	1.171	0.99
136_T	139_T	1.168	0.99
111_P	136_T	1.165	0.99
427_Q	430_G	1.165	0.99
110_L	252_Y	1.163	0.99
66_E	126_K	1.161	0.99
264_G	319_G	1.161	0.99
375_A	379_L	1.147	0.99
390_T	394_L	1.142	0.99
415_D	419_D	1.136	0.99
163_V	166_I	1.129	0.99
153_T	156_E	1.122	0.99
367_D	370_A	1.113	0.99
309_V	343_A	1.106	0.99
254_T	322_I	1.105	0.99
172_V	323_T	1.102	0.99
42_T	76_R	1.102	0.99
285_A	293_A	1.100	0.99
120_V	220_I	1.096	0.99
274_L	343_A	1.094	0.99
412_K	423_A	1.089	0.99
96_A	105_Q	1.089	0.99
362_H	432_L	1.089	0.99
117_L	233_V	1.084	0.99
163_V	191_L	1.080	0.99
380_I	388_V	1.077	0.99
85_V	88_V	1.076	0.99
213_G	238_P	1.073	0.99
89_L	92_A	1.066	0.99
131_L	134_P	1.063	0.99
39_L	67_S	1.053	0.99
251_A	281_Q	1.050	0.99
370_A	399_Q	1.046	0.99
207_G	269_L	1.045	0.99
196_A	232_S	1.043	0.99
55_E	92_A	1.039	0.99
160_D	442_W	1.034	0.99
40_E	73_N	1.032	0.99
158_V	379_L	1.029	0.99
202_D	266_H	1.024	0.99
196_A	270_I	1.017	0.99
41_A	52_C	1.017	0.99
144_T	262_D	1.015	0.99
83_E	245_L	1.013	0.99
333_D	336_Q	1.007	0.98
423_A	427_Q	0.999	0.98
172_V	178_M	0.994	0.98
123_G	252_Y	0.992	0.98
357_L	433_Q	0.981	0.98
359_E	370_A	0.979	0.98
182_A	186_V	0.978	0.98
81_P	85_V	0.976	0.98
113_G	116_L	0.975	0.98
123_G	245_L	0.973	0.98
376_M	380_I	0.962	0.98
263_R	267_V	0.961	0.98
209_I	271_M	0.960	0.98
333_D	355_R	0.950	0.98
212_R	215_E	0.949	0.98
305_L	346_I	0.949	0.98
330_T	337_D	0.948	0.98
73_N	78_F	0.941	0.98
261_R	267_V	0.940	0.98
183_G	355_R	0.933	0.97
129_D	132_P	0.931	0.97
119_R	134_P	0.929	0.97
330_T	340_A	0.928	0.97
121_L	134_P	0.925	0.97
440_A	448_G	0.925	0.97
228_G	232_S	0.923	0.97
161_T	325_F	0.921	0.97
51_T	66_E	0.920	0.97
401_N	405_V	0.919	0.97
384_H	442_W	0.917	0.97
171_T	442_W	0.917	0.97
153_T	314_N	0.916	0.97
233_V	260_F	0.913	0.97
183_G	341_D	0.912	0.97
274_L	309_V	0.908	0.97
384_H	446_L	0.908	0.97
254_T	269_L	0.908	0.97
251_A	304_K	0.904	0.97
211_E	215_E	0.902	0.97
152_R	384_H	0.901	0.97
141_A	144_T	0.900	0.97
305_L	342_S	0.895	0.97
116_L	233_V	0.892	0.97
123_G	128_L	0.892	0.97
166_I	170_L	0.892	0.97
410_Y	413_G	0.891	0.97
56_R	64_E	0.891	0.97
183_G	333_D	0.890	0.97
205_V	233_V	0.889	0.97
138_E	259_D	0.882	0.96
202_D	265_Q	0.881	0.96
420_K	423_A	0.878	0.96
84_E	87_G	0.877	0.96
279_M	331_E	0.872	0.96
165_P	432_L	0.870	0.96
303_A	306_P	0.868	0.96
159_L	199_T	0.865	0.96
54_I	92_A	0.863	0.96
312_A	324_A	0.861	0.96
161_T	167_N	0.861	0.96
116_L	121_L	0.860	0.96
270_I	327_T	0.858	0.96
397_S	417_M	0.853	0.96
72_F	77_L	0.853	0.96
151_Q	317_S	0.852	0.96
209_I	250_A	0.851	0.96
72_F	90_P	0.851	0.96
253_A	269_L	0.850	0.96
387_R	446_L	0.842	0.95
196_A	206_V	0.842	0.95
349_G	374_R	0.841	0.95
356_R	399_Q	0.841	0.95
168_A	449_L	0.841	0.95
157_H	266_H	0.840	0.95
335_Q	370_A	0.838	0.95
268_L	325_F	0.838	0.95
408_G	419_D	0.836	0.95
248_Q	252_Y	0.835	0.95
218_D	378_A	0.833	0.95
273_S	327_T	0.831	0.95
192_L	219_F	0.831	0.95
228_G	231_R	0.830	0.95
376_M	384_H	0.828	0.95
51_T	104_L	0.827	0.95
114_P	260_F	0.826	0.95
31_L	39_L	0.826	0.95
192_L	270_I	0.823	0.95
246_R	283_E	0.823	0.95
28_Y	95_Y	0.823	0.95
204_I	207_G	0.822	0.95
259_D	262_D	0.819	0.95
397_S	401_N	0.818	0.95
126_K	133_S	0.816	0.95
243_P	246_R	0.816	0.95
335_Q	340_A	0.810	0.94
38_V	288_I	0.809	0.94
440_A	446_L	0.807	0.94
83_E	242_S	0.804	0.94
108_K	248_Q	0.802	0.94
440_A	445_S	0.801	0.94
393_Q	433_Q	0.801	0.94
377_T	392_K	0.801	0.94
34_A	142_L	0.800	0.94
220_I	224_L	0.800	0.94
291_P	299_P	0.799	0.94
243_P	247_M	0.798	0.94
205_V	235_I	0.798	0.94
148_N	151_Q	0.797	0.94
50_A	104_L	0.797	0.94
247_M	284_I	0.794	0.94
277_Y	308_L	0.794	0.94
442_W	446_L	0.793	0.94
50_A	107_G	0.791	0.94
398_F	425_W	0.791	0.94
160_D	194_M	0.788	0.94
279_M	297_Y	0.788	0.94
35_T	407_V	0.787	0.93
68_E	82_L	0.785	0.93
406_S	415_D	0.782	0.93
160_D	449_L	0.781	0.93
334_D	341_D	0.781	0.93
352_V	370_A	0.780	0.93
158_V	171_T	0.779	0.93
203_V	267_V	0.773	0.93
123_G	241_V	0.772	0.93
196_A	204_I	0.771	0.93
171_T	380_I	0.765	0.92
169_L	388_V	0.755	0.92
354_S	370_A	0.755	0.92
183_G	334_D	0.754	0.92
145_P	307_A	0.752	0.92
109_Q	141_A	0.752	0.92
211_E	276_R	0.750	0.92
153_T	319_G	0.748	0.92
83_E	126_K	0.748	0.92
237_A	241_V	0.747	0.92
167_N	445_S	0.745	0.91
173_G	375_A	0.744	0.91
200_R	266_H	0.742	0.91
142_L	252_Y	0.742	0.91
269_L	312_A	0.742	0.91
181_F	340_A	0.741	0.91
68_E	248_Q	0.740	0.91
387_R	449_L	0.739	0.91
174_R	321_S	0.733	0.91
380_I	384_H	0.729	0.91
279_M	342_S	0.729	0.91
119_R	128_L	0.727	0.90
153_T	317_S	0.722	0.90
352_V	355_R	0.718	0.90
278_A	305_L	0.718	0.90
403_D	409_A	0.716	0.90
212_R	276_R	0.715	0.90
413_G	419_D	0.715	0.90
166_I	191_L	0.715	0.90
393_Q	397_S	0.715	0.90
424_L	427_Q	0.714	0.90
395_L	428_L	0.711	0.89
205_V	253_A	0.711	0.89
419_D	423_A	0.711	0.89
108_K	167_N	0.711	0.89
443_E	447_Q	0.709	0.89
386_A	389_R	0.708	0.89
332_G	337_D	0.707	0.89
161_T	166_I	0.704	0.89
81_P	84_E	0.703	0.89
277_Y	304_K	0.701	0.89
230_A	233_V	0.701	0.89
155_I	375_A	0.701	0.89
261_R	322_I	0.700	0.89
301_V	304_K	0.697	0.89
199_T	268_L	0.696	0.88
178_M	351_I	0.695	0.88
202_D	231_R	0.695	0.88
112_L	255_R	0.695	0.88
41_A	67_S	0.694	0.88
290_E	300_S	0.693	0.88
314_N	321_S	0.693	0.88
247_M	281_Q	0.693	0.88
297_Y	334_D	0.691	0.88
267_V	283_E	0.685	0.88
403_D	406_S	0.685	0.88
341_D	344_R	0.685	0.88
162_G	191_L	0.684	0.88
294_T	342_S	0.683	0.88
264_G	318_G	0.682	0.87
412_K	422_I	0.682	0.87
50_A	108_K	0.682	0.87
171_T	384_H	0.681	0.87
196_A	231_R	0.681	0.87
216_V	236_A	0.675	0.87
367_D	399_Q	0.673	0.87
183_G	296_G	0.673	0.87
384_H	388_V	0.673	0.87
43_G	46_L	0.672	0.87
402_R	429_E	0.671	0.87
386_A	390_T	0.669	0.86
237_A	246_R	0.668	0.86
395_L	399_Q	0.665	0.86
383_Q	450_E	0.664	0.86
394_L	420_K	0.662	0.86
38_V	78_F	0.661	0.86
133_S	136_T	0.661	0.86
124_S	127_P	0.659	0.86
129_D	134_P	0.659	0.86
287_A	291_P	0.656	0.85
398_F	402_R	0.656	0.85
197_R	202_D	0.655	0.85
119_R	133_S	0.651	0.85
411_A	414_S	0.651	0.85
271_M	308_L	0.650	0.85
412_K	415_D	0.650	0.85
82_L	245_L	0.650	0.85
173_G	374_R	0.650	0.85
203_V	231_R	0.650	0.85
77_L	94_V	0.647	0.85
134_P	137_T	0.647	0.85
195_M	268_L	0.646	0.84
170_L	372_I	0.646	0.84
154_P	378_A	0.646	0.84
128_L	236_A	0.644	0.84
127_P	131_L	0.644	0.84
375_A	380_I	0.644	0.84
184_S	346_I	0.643	0.84
128_L	241_V	0.643	0.84
383_Q	387_R	0.641	0.84
184_S	344_R	0.639	0.84
71_G	78_F	0.639	0.84
93_R	96_A	0.637	0.84
291_P	303_A	0.637	0.84
138_E	141_A	0.637	0.84
121_L	124_S	0.636	0.84
382_E	435_G	0.636	0.84
57_Q	89_L	0.632	0.83
256_I	260_F	0.632	0.83
72_F	78_F	0.631	0.83
251_A	277_Y	0.629	0.83
204_I	232_S	0.629	0.83
168_A	171_T	0.628	0.83
440_A	444_A	0.628	0.83
249_G	253_A	0.628	0.83
413_G	416_P	0.626	0.83
163_V	194_M	0.626	0.83
258_E	261_R	0.618	0.82
64_E	95_Y	0.617	0.82
104_L	107_G	0.617	0.82
431_Y	448_G	0.617	0.82
65_V	87_G	0.616	0.82
132_P	136_T	0.614	0.81
50_A	167_N	0.613	0.81
107_G	141_A	0.613	0.81
187_G	272_D	0.612	0.81
252_Y	255_R	0.611	0.81
56_R	92_A	0.611	0.81
394_L	428_L	0.610	0.81
435_G	439_R	0.607	0.81
68_E	108_K	0.607	0.81
278_A	339_I	0.605	0.80
221_E	226_A	0.604	0.80
122_D	128_L	0.603	0.80
290_E	313_G	0.602	0.80
225_G	229_R	0.601	0.80
51_T	108_K	0.601	0.80
246_R	250_A	0.600	0.80
336_Q	343_A	0.597	0.80
180_L	325_F	0.596	0.79
173_G	379_L	0.595	0.79
426_P	429_E	0.594	0.79
115_A	138_E	0.593	0.79
369_E	395_L	0.593	0.79
345_A	372_I	0.589	0.79
437_F	448_G	0.589	0.79
226_A	234_V	0.586	0.78
255_R	259_D	0.584	0.78
254_T	271_M	0.584	0.78
111_P	137_T	0.583	0.78
206_V	216_V	0.582	0.78
156_E	319_G	0.580	0.78
417_M	426_P	0.579	0.77
65_V	81_P	0.578	0.77
184_S	279_M	0.578	0.77
39_L	54_I	0.577	0.77
151_Q	314_N	0.572	0.77
46_L	96_A	0.571	0.77
188_K	272_D	0.571	0.77
167_N	198_Y	0.571	0.77
444_A	447_Q	0.570	0.76
356_R	400_R	0.569	0.76
445_S	448_G	0.568	0.76
285_A	300_S	0.568	0.76
128_L	133_S	0.567	0.76
35_T	38_V	0.567	0.76
139_T	420_K	0.566	0.76
143_I	307_A	0.564	0.76
114_P	139_T	0.564	0.76
277_Y	281_Q	0.563	0.76
266_H	314_N	0.563	0.76
422_I	426_P	0.562	0.75
164_R	448_G	0.561	0.75
88_V	92_A	0.561	0.75
160_D	200_R	0.561	0.75
52_C	77_L	0.560	0.75
246_R	249_G	0.560	0.75
197_R	437_F	0.560	0.75
131_L	229_R	0.559	0.75
117_L	265_Q	0.559	0.75
218_D	222_N	0.558	0.75
247_M	252_Y	0.558	0.75
410_Y	419_D	0.557	0.75
283_E	299_P	0.556	0.75
180_L	351_I	0.555	0.74
108_K	252_Y	0.555	0.74
66_E	69_V	0.554	0.74
185_G	283_E	0.553	0.74
182_A	194_M	0.553	0.74
123_G	127_P	0.553	0.74
125_G	205_V	0.553	0.74
247_M	304_K	0.552	0.74
204_I	270_I	0.552	0.74
67_S	81_P	0.552	0.74
190_V	193_G	0.550	0.74
126_K	139_T	0.549	0.74
124_S	407_V	0.549	0.74
193_G	236_A	0.549	0.74
332_G	341_D	0.547	0.73
117_L	229_R	0.546	0.73
401_N	406_S	0.546	0.73
110_L	113_G	0.546	0.73
195_M	325_F	0.545	0.73
54_I	57_Q	0.545	0.73
254_T	257_A	0.544	0.73
56_R	85_V	0.544	0.73
261_R	266_H	0.544	0.73
250_A	271_M	0.544	0.73
127_P	134_P	0.543	0.73
223_I	228_G	0.542	0.73
242_S	246_R	0.541	0.73
114_P	233_V	0.539	0.72
242_S	245_L	0.539	0.72
160_D	445_S	0.538	0.72
65_V	242_S	0.538	0.72
133_S	137_T	0.538	0.72
88_V	94_V	0.538	0.72
153_T	318_G	0.537	0.72
136_T	259_D	0.537	0.72
224_L	232_S	0.535	0.72
285_A	299_P	0.534	0.72
409_A	413_G	0.534	0.72
161_T	312_A	0.533	0.72
115_A	134_P	0.532	0.71
83_E	87_G	0.531	0.71
108_K	124_S	0.531	0.71
181_F	347_L	0.531	0.71
180_L	353_L	0.531	0.71
92_A	95_Y	0.530	0.71
243_P	250_A	0.529	0.71
57_Q	64_E	0.528	0.71
163_V	436_I	0.528	0.71
119_R	130_G	0.528	0.71
247_M	251_A	0.528	0.71
81_P	88_V	0.527	0.71
404_L	407_V	0.527	0.71
31_L	34_A	0.527	0.71
282_R	339_I	0.527	0.71
438_E	442_W	0.526	0.71
140_G	263_R	0.526	0.71
91_G	94_V	0.524	0.70
80_M	284_I	0.523	0.70
158_V	375_A	0.523	0.70
331_E	336_Q	0.523	0.70
117_L	127_P	0.522	0.70
377_T	436_I	0.522	0.70
197_R	220_I	0.521	0.70
210_G	328_V	0.520	0.70
219_F	224_L	0.520	0.70
158_V	442_W	0.520	0.70
42_T	75_Q	0.519	0.70
208_L	211_E	0.517	0.69
345_A	350_H	0.517	0.69
68_E	71_G	0.516	0.69
81_P	87_G	0.516	0.69
152_R	396_S	0.516	0.69
355_R	359_E	0.516	0.69
170_L	366_I	0.514	0.69
147_F	317_S	0.514	0.69
237_A	245_L	0.513	0.69
46_L	51_T	0.513	0.69
51_T	107_G	0.512	0.69
161_T	181_F	0.512	0.69
57_Q	93_R	0.511	0.68
398_F	429_E	0.510	0.68
171_T	372_I	0.509	0.68
176_Q	374_R	0.508	0.68
44_L	96_A	0.508	0.68
391_F	449_L	0.506	0.68
27_R	45_Q	0.506	0.68
186_V	355_R	0.506	0.68
184_S	345_A	0.505	0.67
216_V	238_P	0.505	0.67
247_M	250_A	0.505	0.67
222_N	255_R	0.504	0.67
78_F	288_I	0.504	0.67
226_A	270_I	0.503	0.67
376_M	385_Y	0.503	0.67
27_R	30_R	0.503	0.67
120_V	128_L	0.503	0.67
105_Q	108_K	0.502	0.67
283_E	297_Y	0.500	0.67
54_I	64_E	0.500	0.67
135_D	138_E	0.500	0.67
159_L	172_V	0.500	0.67

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3oaaA	2	0.9125	100	0.098	Contact Map
2qe7A	1	0.9059	100	0.1	Contact Map
1fx0A	1	0.9125	100	0.117	Contact Map
2r9vA	1	0.93	100	0.125	Contact Map
3vr4D	1	0.919	100	0.127	Contact Map
2ck3A	1	0.9125	100	0.127	Contact Map
2c61A	2	0.8731	100	0.127	Contact Map
3gqbB	1	0.9212	100	0.13	Contact Map
3j9tA	1	0.9081	100	0.137	Contact Map
3mfyA	1	0.7505	100	0.139	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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