YBAE - ECOLI - GREMLIN Contacts

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YBAE - Uncharacterized protein YbaE

UniProt:	P46890	Sequences: MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLQAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13217
Length:	566 (444)
Sequences:	19665 (14585)
Seq/√Len:	692.2

ECOLI - YBAE SGRR SAPA YGIS DDPA MPPA GSIB DPPA OPPA YEJA NIKA
BACSU - YHJP OPPA APPA DPPE
HALSA - Q9HMI3 Q9HMW4
SULSO - Q97VF7 Q97VK5 Q97UG7 Q97UH5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
272_T	282_E	4.036	1.00
356_W	407_T	3.280	1.00
229_T	235_T	3.160	1.00
227_E	235_T	3.154	1.00
400_D	403_K	3.067	1.00
188_S	232_Q	3.028	1.00
368_S	372_Q	2.887	1.00
496_S	500_A	2.855	1.00
230_H	233_C	2.841	1.00
204_H	208_L	2.839	1.00
270_R	282_E	2.719	1.00
504_M	509_N	2.649	1.00
350_S	353_L	2.579	1.00
204_H	228_V	2.546	1.00
363_S	400_D	2.441	1.00
122_T	296_A	2.418	1.00
366_H	369_G	2.412	1.00
172_H	185_Y	2.386	1.00
403_K	407_T	2.352	1.00
361_V	429_L	2.317	1.00
198_V	266_T	2.310	1.00
174_E	185_Y	2.281	1.00
159_D	164_R	2.250	1.00
430_A	435_E	2.243	1.00
493_H	496_S	2.233	1.00
227_E	237_F	2.191	1.00
156_T	173_W	2.185	1.00
181_R	235_T	2.170	1.00
356_W	359_R	2.163	1.00
355_L	359_R	2.161	1.00
409_T	437_T	2.150	1.00
193_H	284_H	2.124	1.00
201_S	228_V	2.118	1.00
159_D	166_I	2.115	1.00
356_W	404_L	2.068	1.00
509_N	512_N	2.056	1.00
183_D	235_T	2.054	1.00
409_T	439_I	2.052	1.00
489_P	524_D	2.024	1.00
500_A	513_A	2.022	1.00
191_H	197_A	2.016	1.00
191_H	286_Y	2.006	1.00
181_R	237_F	2.004	1.00
491_Y	520_Q	2.003	1.00
280_R	296_A	2.001	1.00
175_T	182_W	1.974	1.00
190_L	198_V	1.974	1.00
153_S	168_D	1.953	1.00
176_S	180_L	1.934	1.00
506_D	509_N	1.930	1.00
122_T	298_E	1.918	1.00
207_L	236_F	1.903	1.00
135_Q	209_M	1.899	1.00
512_N	516_A	1.876	1.00
185_Y	233_C	1.871	1.00
126_P	318_V	1.860	1.00
491_Y	524_D	1.855	1.00
199_K	202_H	1.846	1.00
224_K	239_H	1.834	1.00
349_K	456_D	1.833	1.00
312_T	317_P	1.826	1.00
203_L	234_L	1.807	1.00
171_H	188_S	1.799	1.00
270_R	285_D	1.770	1.00
494_L	517_V	1.770	1.00
478_C	490_A	1.754	1.00
273_Q	280_R	1.748	1.00
501_V	514_L	1.739	1.00
124_R	298_E	1.730	1.00
493_H	516_A	1.726	1.00
426_Q	430_A	1.710	1.00
253_C	256_L	1.708	1.00
273_Q	278_L	1.684	1.00
364_I	432_E	1.679	1.00
519_S	523_T	1.671	1.00
355_L	524_D	1.670	1.00
201_S	231_P	1.668	1.00
497_T	516_A	1.668	1.00
493_H	520_Q	1.666	1.00
161_N	164_R	1.654	1.00
384_S	532_N	1.647	1.00
171_H	185_Y	1.619	1.00
449_T	454_H	1.616	1.00
501_V	513_A	1.610	1.00
282_E	296_A	1.604	1.00
225_R	237_F	1.596	1.00
257_A	260_Q	1.592	1.00
478_C	495_Q	1.591	1.00
176_S	181_R	1.582	1.00
252_Y	255_H	1.576	1.00
359_R	400_D	1.568	1.00
189_T	197_A	1.566	1.00
121_P	295_K	1.566	1.00
516_A	519_S	1.565	1.00
272_T	296_A	1.548	1.00
201_S	204_H	1.547	1.00
278_L	298_E	1.527	1.00
442_N	445_N	1.525	1.00
171_H	187_R	1.523	1.00
329_Q	332_S	1.519	1.00
224_K	237_F	1.517	1.00
490_A	495_Q	1.509	1.00
269_F	294_L	1.506	1.00
397_Q	400_D	1.505	1.00
302_T	312_T	1.501	1.00
275_T	278_L	1.499	1.00
359_R	525_A	1.499	1.00
200_A	228_V	1.494	1.00
156_T	184_F	1.488	1.00
492_A	496_S	1.482	1.00
199_K	231_P	1.478	1.00
283_S	295_K	1.460	1.00
355_L	523_T	1.457	1.00
365_I	425_L	1.453	1.00
314_C	330_R	1.452	1.00
448_D	452_Q	1.451	1.00
362_I	525_A	1.447	1.00
368_S	383_A	1.439	1.00
419_H	423_E	1.437	1.00
402_V	406_K	1.428	1.00
357_Q	405_P	1.419	1.00
497_T	513_A	1.415	1.00
513_A	516_A	1.413	1.00
511_F	515_K	1.412	1.00
183_D	233_C	1.410	1.00
343_C	346_T	1.406	1.00
176_S	183_D	1.388	1.00
173_W	184_F	1.379	1.00
399_P	402_V	1.370	1.00
512_N	515_K	1.366	1.00
141_G	144_E	1.365	1.00
347_L	528_T	1.356	1.00
500_A	509_N	1.356	1.00
153_S	266_T	1.356	1.00
398_V	432_E	1.351	1.00
280_R	298_E	1.351	1.00
504_M	513_A	1.349	1.00
153_S	288_H	1.338	1.00
371_L	383_A	1.328	1.00
349_K	353_L	1.325	1.00
479_D	490_A	1.323	1.00
193_H	270_R	1.310	1.00
197_A	232_Q	1.310	1.00
361_V	434_C	1.303	1.00
124_R	319_Q	1.302	1.00
439_I	449_T	1.300	1.00
428_T	431_A	1.289	1.00
272_T	280_R	1.288	1.00
412_Y	438_I	1.287	1.00
124_R	300_W	1.284	1.00
196_D	255_H	1.271	1.00
120_T	295_K	1.268	1.00
204_H	226_I	1.266	1.00
229_T	233_C	1.261	1.00
191_H	284_H	1.250	1.00
520_Q	524_D	1.248	1.00
185_Y	232_Q	1.247	1.00
496_S	499_D	1.244	1.00
509_N	513_A	1.234	1.00
190_L	266_T	1.233	1.00
497_T	520_Q	1.220	1.00
236_F	245_L	1.215	1.00
187_R	288_H	1.214	1.00
240_R	503_I	1.211	1.00
479_D	495_Q	1.204	1.00
412_Y	440_F	1.202	1.00
453_A	488_A	1.201	1.00
500_A	504_M	1.195	1.00
390_G	532_N	1.186	1.00
371_L	381_I	1.186	1.00
352_R	361_V	1.185	1.00
427_A	431_A	1.183	1.00
443_A	447_D	1.178	1.00
123_L	320_I	1.176	1.00
278_L	300_W	1.174	1.00
169_L	266_T	1.174	1.00
312_T	318_V	1.172	1.00
347_L	457_L	1.171	1.00
352_R	408_L	1.168	1.00
313_S	538_S	1.164	1.00
187_R	190_L	1.148	1.00
126_P	308_K	1.147	1.00
508_E	511_F	1.147	1.00
424_R	428_T	1.143	1.00
319_Q	542_G	1.140	1.00
281_L	299_Y	1.140	1.00
208_L	212_Q	1.138	1.00
493_H	497_T	1.136	1.00
228_V	231_P	1.136	1.00
314_C	334_V	1.135	1.00
404_L	407_T	1.134	1.00
403_K	406_K	1.128	1.00
167_G	173_W	1.126	1.00
157_R	168_D	1.124	1.00
346_T	458_M	1.123	1.00
477_R	499_D	1.110	1.00
147_L	281_L	1.104	1.00
364_I	429_L	1.100	1.00
489_P	494_L	1.097	1.00
182_W	245_L	1.095	1.00
319_Q	540_P	1.094	1.00
270_R	284_H	1.091	1.00
359_R	404_L	1.088	1.00
157_R	166_I	1.087	1.00
429_L	436_L	1.086	1.00
201_S	254_S	1.084	1.00
193_H	286_Y	1.084	1.00
355_L	525_A	1.077	1.00
369_G	428_T	1.076	1.00
426_Q	438_I	1.074	1.00
226_I	234_L	1.073	1.00
174_E	183_D	1.056	1.00
194_N	255_H	1.056	1.00
375_E	531_F	1.055	1.00
123_L	294_L	1.054	1.00
497_T	517_V	1.051	1.00
329_Q	333_Q	1.047	1.00
494_L	521_L	1.047	1.00
283_S	292_P	1.043	1.00
555_E	558_E	1.040	1.00
508_E	512_N	1.036	1.00
171_H	232_Q	1.036	1.00
169_L	203_L	1.033	1.00
410_L	436_L	1.029	1.00
202_H	205_Q	1.024	1.00
468_P	510_R	1.023	1.00
184_F	236_F	1.023	1.00
282_E	285_D	1.016	1.00
500_A	516_A	1.012	1.00
311_G	314_C	1.012	1.00
252_Y	256_L	1.009	1.00
556_F	559_A	1.008	1.00
501_V	517_V	1.003	1.00
400_D	404_L	0.998	1.00
398_V	402_V	0.998	1.00
425_L	429_L	0.997	1.00
408_L	457_L	0.995	1.00
222_S	242_D	0.994	1.00
193_H	264_I	0.993	1.00
489_P	526_T	0.988	1.00
497_T	500_A	0.988	1.00
520_Q	523_T	0.987	1.00
208_L	211_L	0.983	1.00
327_E	330_R	0.976	1.00
473_E	477_R	0.974	1.00
197_A	231_P	0.971	1.00
188_S	197_A	0.969	1.00
382_T	534_H	0.969	1.00
169_L	190_L	0.967	1.00
426_Q	436_L	0.967	1.00
362_I	528_T	0.963	1.00
200_A	229_T	0.963	1.00
123_L	543_V	0.963	1.00
445_N	449_T	0.957	1.00
422_A	438_I	0.955	1.00
370_L	421_M	0.953	1.00
427_A	430_A	0.952	1.00
182_W	246_A	0.949	1.00
399_P	403_K	0.944	1.00
202_H	206_R	0.944	1.00
119_D	293_L	0.943	1.00
130_P	274_F	0.939	1.00
185_Y	188_S	0.939	1.00
359_R	363_S	0.937	1.00
192_W	202_H	0.935	1.00
499_D	503_I	0.934	1.00
420_T	423_E	0.932	1.00
441_H	449_T	0.932	1.00
362_I	367_Q	0.930	1.00
201_S	205_Q	0.929	1.00
182_W	238_L	0.929	1.00
408_L	436_L	0.926	1.00
369_G	373_T	0.925	1.00
342_F	346_T	0.924	1.00
156_T	170_A	0.923	1.00
336_S	534_H	0.922	1.00
398_V	431_A	0.917	1.00
193_H	265_G	0.917	1.00
359_R	523_T	0.916	1.00
154_G	168_D	0.912	1.00
450_T	458_M	0.909	1.00
289_L	557_T	0.904	1.00
375_E	381_I	0.904	1.00
318_V	321_T	0.903	1.00
189_T	232_Q	0.900	1.00
371_L	531_F	0.899	1.00
180_L	237_F	0.899	1.00
183_D	229_T	0.898	1.00
343_C	347_L	0.893	1.00
200_A	234_L	0.891	1.00
204_H	234_L	0.887	1.00
169_L	198_V	0.884	1.00
382_T	390_G	0.881	1.00
283_S	291_H	0.881	1.00
372_Q	379_N	0.878	1.00
430_A	434_C	0.875	1.00
494_L	498_L	0.875	1.00
185_Y	230_H	0.875	1.00
307_E	312_T	0.875	1.00
245_L	249_L	0.869	1.00
367_Q	383_A	0.866	1.00
194_N	264_I	0.863	1.00
192_W	255_H	0.860	1.00
156_T	165_P	0.858	1.00
310_L	314_C	0.858	1.00
507_E	511_F	0.857	1.00
184_F	246_A	0.856	1.00
151_I	281_L	0.854	1.00
193_H	271_L	0.852	1.00
517_V	520_Q	0.852	1.00
176_S	179_G	0.846	1.00
152_F	265_G	0.845	1.00
212_Q	215_A	0.843	1.00
498_L	517_V	0.842	1.00
366_H	428_T	0.842	1.00
178_D	181_R	0.841	1.00
150_Q	281_L	0.834	1.00
302_T	318_V	0.834	1.00
360_K	405_P	0.833	1.00
387_L	529_P	0.833	1.00
151_I	271_L	0.829	1.00
396_W	431_A	0.828	1.00
310_L	331_V	0.823	1.00
363_S	396_W	0.820	1.00
269_F	292_P	0.820	1.00
494_L	520_Q	0.819	1.00
411_V	439_I	0.819	1.00
281_L	297_V	0.818	1.00
156_T	246_A	0.817	1.00
500_A	503_I	0.816	1.00
228_V	234_L	0.813	1.00
137_G	209_M	0.813	1.00
313_S	321_T	0.811	1.00
208_L	226_I	0.804	1.00
121_P	294_L	0.802	1.00
130_P	301_I	0.800	1.00
153_S	287_Y	0.798	1.00
515_K	519_S	0.796	1.00
238_L	245_L	0.795	1.00
180_L	224_K	0.795	1.00
366_H	396_W	0.795	1.00
328_L	332_S	0.791	1.00
331_V	538_S	0.788	1.00
174_E	177_T	0.787	1.00
364_I	398_V	0.787	1.00
274_F	279_V	0.787	1.00
516_A	520_Q	0.787	1.00
118_N	121_P	0.785	1.00
347_L	361_V	0.785	1.00
349_K	352_R	0.783	1.00
117_Q	293_L	0.781	1.00
365_I	370_L	0.780	1.00
170_A	184_F	0.779	1.00
324_K	327_E	0.778	1.00
242_D	248_R	0.774	1.00
409_T	456_D	0.773	1.00
130_P	276_A	0.771	1.00
184_F	249_L	0.768	1.00
401_E	432_E	0.760	1.00
338_I	346_T	0.758	1.00
137_G	210_L	0.758	1.00
485_V	488_A	0.756	1.00
160_N	547_R	0.756	1.00
478_C	499_D	0.756	1.00
180_L	240_R	0.754	1.00
419_H	440_F	0.754	1.00
125_I	320_I	0.752	1.00
492_A	495_Q	0.751	1.00
196_D	202_H	0.748	1.00
283_S	294_L	0.748	1.00
477_R	480_P	0.747	1.00
363_S	395_H	0.747	1.00
405_P	434_C	0.745	1.00
489_P	520_Q	0.744	1.00
207_L	249_L	0.743	1.00
222_S	240_R	0.742	1.00
363_S	404_L	0.741	1.00
423_E	438_I	0.741	1.00
151_I	265_G	0.740	1.00
282_E	295_K	0.740	1.00
365_I	429_L	0.739	1.00
546_V	559_A	0.738	1.00
526_T	529_P	0.738	1.00
216_L	219_L	0.737	1.00
186_L	198_V	0.735	1.00
370_L	424_R	0.734	1.00
150_Q	297_V	0.734	1.00
228_V	235_T	0.732	1.00
139_L	148_A	0.731	1.00
343_C	348_R	0.731	1.00
329_Q	378_E	0.730	1.00
190_L	232_Q	0.730	1.00
175_T	179_G	0.729	1.00
271_L	279_V	0.728	1.00
320_I	543_V	0.727	1.00
412_Y	422_A	0.724	1.00
147_L	279_V	0.724	1.00
346_T	487_D	0.721	1.00
361_V	457_L	0.721	1.00
429_L	457_L	0.720	1.00
192_W	265_G	0.719	1.00
386_A	518_F	0.719	1.00
411_V	414_L	0.717	1.00
341_G	346_T	0.717	1.00
223_V	226_I	0.715	1.00
423_E	426_Q	0.715	1.00
416_I	420_T	0.714	1.00
159_D	162_T	0.712	1.00
168_D	288_H	0.711	1.00
445_N	448_D	0.709	1.00
311_G	315_R	0.709	1.00
198_V	206_R	0.709	1.00
200_A	204_H	0.707	1.00
217_D	220_F	0.701	1.00
123_L	297_V	0.699	1.00
173_W	246_A	0.699	1.00
470_Y	474_Q	0.698	1.00
198_V	232_Q	0.697	1.00
415_P	419_H	0.694	1.00
190_L	288_H	0.693	1.00
332_S	336_S	0.691	1.00
354_S	357_Q	0.691	1.00
313_S	540_P	0.690	1.00
361_V	528_T	0.689	1.00
411_V	441_H	0.689	1.00
446_W	458_M	0.688	1.00
211_L	239_H	0.686	1.00
285_D	295_K	0.686	1.00
152_F	263_L	0.685	1.00
192_W	266_T	0.684	1.00
132_E	141_G	0.684	1.00
186_L	232_Q	0.684	1.00
477_R	498_L	0.683	1.00
121_P	293_L	0.681	1.00
155_L	170_A	0.680	1.00
192_W	198_V	0.680	1.00
469_E	473_E	0.679	1.00
430_A	436_L	0.678	1.00
216_L	220_F	0.677	1.00
421_M	425_L	0.677	1.00
443_A	460_G	0.676	1.00
513_A	517_V	0.675	1.00
470_Y	502_Q	0.674	1.00
186_L	190_L	0.671	1.00
302_T	308_K	0.669	1.00
411_V	449_T	0.665	1.00
441_H	445_N	0.665	1.00
540_P	543_V	0.664	1.00
202_H	255_H	0.664	1.00
243_Y	510_R	0.664	1.00
180_L	241_P	0.664	1.00
126_P	302_T	0.663	1.00
413_H	418_L	0.663	1.00
510_R	514_L	0.660	1.00
196_D	253_C	0.659	1.00
199_K	232_Q	0.659	1.00
499_D	502_Q	0.658	1.00
226_I	236_F	0.656	1.00
300_W	312_T	0.656	1.00
352_R	357_Q	0.655	1.00
341_G	463_L	0.655	1.00
208_L	225_R	0.654	1.00
271_L	274_F	0.654	1.00
412_Y	419_H	0.654	1.00
364_I	396_W	0.654	1.00
173_W	185_Y	0.653	1.00
465_G	471_T	0.652	1.00
289_L	292_P	0.650	1.00
345_L	425_L	0.650	1.00
539_A	546_V	0.649	1.00
270_R	286_Y	0.648	1.00
269_F	296_A	0.647	1.00
334_V	541_P	0.647	1.00
222_S	239_H	0.647	1.00
120_T	293_L	0.646	1.00
154_G	266_T	0.645	1.00
204_H	227_E	0.645	1.00
244_W	468_P	0.643	1.00
428_T	432_E	0.642	1.00
308_K	321_T	0.641	1.00
429_L	434_C	0.640	1.00
405_P	432_E	0.639	1.00
425_L	436_L	0.639	1.00
411_V	455_A	0.639	1.00
240_R	499_D	0.638	1.00
370_L	425_L	0.638	1.00
158_F	165_P	0.637	1.00
361_V	408_L	0.637	1.00
205_Q	209_M	0.634	1.00
152_F	266_T	0.634	1.00
304_P	307_E	0.632	1.00
335_S	541_P	0.631	1.00
394_P	511_F	0.631	1.00
313_S	318_V	0.631	1.00
279_V	301_I	0.628	1.00
494_L	497_T	0.626	1.00
283_S	290_R	0.625	1.00
202_H	252_Y	0.622	1.00
441_H	446_W	0.621	1.00
200_A	232_Q	0.617	1.00
139_L	144_E	0.617	1.00
380_L	536_R	0.616	1.00
294_L	543_V	0.616	1.00
297_V	556_F	0.616	1.00
223_V	236_F	0.616	1.00
158_F	250_A	0.614	1.00
473_E	476_L	0.614	1.00
393_I	507_E	0.613	1.00
155_L	203_L	0.609	1.00
507_E	510_R	0.608	1.00
365_I	528_T	0.607	1.00
371_L	375_E	0.606	1.00
423_E	427_A	0.605	1.00
271_L	281_L	0.605	1.00
343_C	418_L	0.604	1.00
336_S	380_L	0.604	1.00
200_A	230_H	0.603	1.00
368_S	371_L	0.602	1.00
127_Y	299_Y	0.600	1.00
263_L	271_L	0.598	1.00
421_M	531_F	0.597	1.00
398_V	405_P	0.596	1.00
495_Q	499_D	0.596	1.00
117_Q	121_P	0.595	1.00
474_Q	478_C	0.595	1.00
181_R	227_E	0.595	1.00
167_G	172_H	0.594	1.00
525_A	528_T	0.593	1.00
462_R	465_G	0.592	1.00
305_L	308_K	0.591	1.00
555_E	559_A	0.591	1.00
175_T	246_A	0.589	1.00
365_I	530_L	0.587	1.00
151_I	263_L	0.587	1.00
338_I	534_H	0.587	1.00
345_L	457_L	0.586	1.00
274_F	301_I	0.584	1.00
316_H	540_P	0.582	1.00
349_K	454_H	0.581	1.00
277_E	300_W	0.580	1.00
134_L	279_V	0.580	1.00
205_Q	255_H	0.579	1.00
153_S	289_L	0.578	1.00
408_L	412_Y	0.578	1.00
186_L	203_L	0.577	1.00
410_L	422_A	0.574	1.00
351_P	456_D	0.572	1.00
320_I	539_A	0.571	1.00
429_L	432_E	0.571	1.00
150_Q	299_Y	0.570	1.00
125_I	556_F	0.569	1.00
269_F	283_S	0.568	1.00
416_I	419_H	0.568	1.00
192_W	206_R	0.567	1.00
436_L	457_L	0.567	1.00
202_H	253_C	0.566	1.00
156_T	250_A	0.565	1.00
501_V	510_R	0.564	1.00
134_L	274_F	0.564	1.00
330_R	333_Q	0.563	1.00
193_H	266_T	0.563	1.00
261_F	276_A	0.563	1.00
402_V	432_E	0.561	1.00
122_T	280_R	0.559	1.00
410_L	459_M	0.559	1.00
462_R	475_W	0.558	1.00
198_V	203_L	0.557	1.00
393_I	511_F	0.557	1.00
137_G	206_R	0.557	1.00
133_P	138_F	0.557	1.00
300_W	317_P	0.555	1.00
310_L	327_E	0.555	1.00
157_R	289_L	0.554	1.00
294_L	297_V	0.554	1.00
418_L	459_M	0.553	1.00
448_D	451_L	0.553	1.00
332_S	380_L	0.552	1.00
472_L	477_R	0.552	1.00
338_I	343_C	0.552	1.00
179_G	183_D	0.552	1.00
491_Y	494_L	0.551	1.00
208_L	228_V	0.549	1.00
422_A	459_M	0.549	1.00
228_V	233_C	0.548	1.00
474_Q	502_Q	0.547	1.00
124_R	318_V	0.547	1.00
363_S	401_E	0.547	1.00
328_L	536_R	0.545	1.00
397_Q	403_K	0.544	1.00
165_P	246_A	0.544	1.00
447_D	450_T	0.544	1.00
120_T	296_A	0.543	1.00
368_S	395_H	0.543	1.00
156_T	249_L	0.541	1.00
269_F	559_A	0.540	1.00
342_F	347_L	0.539	1.00
148_A	151_I	0.539	1.00
192_W	199_K	0.538	1.00
357_Q	361_V	0.538	1.00
539_A	543_V	0.535	1.00
497_T	501_V	0.534	1.00
117_Q	120_T	0.533	1.00
220_F	223_V	0.532	1.00
132_E	144_E	0.532	1.00
200_A	233_C	0.532	1.00
352_R	457_L	0.531	1.00
347_L	352_R	0.531	1.00
517_V	521_L	0.530	1.00
336_S	536_R	0.529	1.00
192_W	196_D	0.528	1.00
466_E	470_Y	0.528	1.00
554_F	559_A	0.528	1.00
487_D	527_L	0.528	1.00
177_T	181_R	0.527	1.00
380_L	383_A	0.527	1.00
396_W	428_T	0.526	1.00
147_L	299_Y	0.526	1.00
179_G	505_P	0.525	1.00
410_L	414_L	0.525	1.00
503_I	513_A	0.524	1.00
413_H	446_W	0.524	1.00
470_Y	514_L	0.524	1.00
504_M	510_R	0.523	1.00
290_R	293_L	0.523	1.00
450_T	486_F	0.522	1.00
197_A	202_H	0.522	1.00
418_L	461_D	0.522	1.00
198_V	265_G	0.520	1.00
336_S	346_T	0.519	1.00
153_S	190_L	0.519	1.00
522_M	525_A	0.519	1.00
127_Y	131_L	0.517	0.99
370_L	530_L	0.517	0.99
414_L	419_H	0.517	0.99
465_G	472_L	0.517	0.99
447_D	451_L	0.517	0.99
171_H	190_L	0.517	0.99
363_S	397_Q	0.516	0.99
148_A	152_F	0.516	0.99
356_W	403_K	0.516	0.99
119_D	295_K	0.514	0.99
537_I	546_V	0.514	0.99
477_R	521_L	0.513	0.99
380_L	534_H	0.513	0.99
369_G	424_R	0.513	0.99
515_K	518_F	0.513	0.99
186_L	200_A	0.512	0.99
340_L	346_T	0.511	0.99
523_T	526_T	0.508	0.99
504_M	507_E	0.508	0.99
306_F	327_E	0.508	0.99
198_V	202_H	0.507	0.99
141_G	443_A	0.507	0.99
332_S	335_S	0.506	0.99
226_I	229_T	0.506	0.99
116_W	119_D	0.506	0.99
256_L	264_I	0.504	0.99
345_L	528_T	0.503	0.99
352_R	456_D	0.503	0.99
184_F	234_L	0.503	0.99
466_E	471_T	0.502	0.99
192_W	203_L	0.501	0.99
207_L	226_I	0.501	0.99
153_S	198_V	0.501	0.99
342_F	348_R	0.500	0.99
505_P	509_N	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1xocA	2	0.7774	100	0.371	Contact Map
4tozA	1	0.7968	100	0.371	Contact Map
3zs6A	1	0.7739	100	0.372	Contact Map
3m8uA	1	0.7792	100	0.374	Contact Map
4gl8A	1	0.7721	100	0.376	Contact Map
1jetA	1	0.7933	100	0.378	Contact Map
3tpaA	1	0.7774	100	0.378	Contact Map
1dpeA	1	0.7756	100	0.378	Contact Map
4qflA	1	0.7756	100	0.379	Contact Map
1uqwA	1	0.7739	100	0.38	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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