DXR - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

DXR - 1-deoxy-D-xylulose 5-phosphate reductoisomerase

UniProt:	P45568	Sequences: MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12715
Length:	398 (380)
Sequences:	3318 (2126)
Seq/√Len:	109.1

ECOLI - DXR
BACSU - DXR

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
22_R	48_E	5.568	1.00
9_S	45_Q	3.695	1.00
3_Q	29_R	3.164	1.00
17_T	98_M	3.113	1.00
193_T	197_D	3.081	1.00
204_D	349_Q	3.059	1.00
355_D	358_A	2.991	1.00
179_V	261_R	2.971	1.00
298_D	301_K	2.932	1.00
198_L	201_M	2.798	1.00
139_V	146_L	2.772	1.00
18_L	49_F	2.758	1.00
115_R	138_A	2.707	1.00
19_D	277_R	2.705	1.00
223_A	353_F	2.657	1.00
180_S	247_E	2.624	1.00
192_E	314_R	2.573	1.00
352_R	355_D	2.474	1.00
4_L	21_V	2.465	1.00
253_Q	306_T	2.414	1.00
119_T	145_Q	2.332	1.00
243_A	325_F	2.287	1.00
194_P	197_D	2.278	1.00
226_M	335_L	2.220	1.00
42_M	56_M	2.219	1.00
43_V	68_M	2.218	1.00
22_R	49_F	2.209	1.00
180_S	261_R	2.203	1.00
344_A	348_A	2.201	1.00
112_A	115_R	2.197	1.00
111_L	138_A	2.164	1.00
244_S	326_E	2.113	1.00
242_S	245_Q	2.100	1.00
374_C	377_D	2.100	1.00
38_N	41_R	2.077	1.00
361_L	365_E	2.041	1.00
21_V	30_V	1.976	1.00
331_A	364_L	1.974	1.00
137_D	141_Q	1.973	1.00
179_V	296_P	1.943	1.00
319_K	323_E	1.930	1.00
343_V	347_L	1.923	1.00
53_Y	79_L	1.921	1.00
363_V	389_A	1.920	1.00
232_Y	322_M	1.888	1.00
295_K	301_K	1.869	1.00
192_E	308_A	1.861	1.00
363_V	385_A	1.820	1.00
330_A	367_M	1.793	1.00
193_T	205_Q	1.735	1.00
191_R	308_A	1.728	1.00
46_C	54_A	1.706	1.00
33_L	45_Q	1.703	1.00
41_R	44_E	1.699	1.00
312_Y	319_K	1.672	1.00
156_I	181_I	1.666	1.00
330_A	381_V	1.648	1.00
341_I	390_R	1.643	1.00
203_P	349_Q	1.640	1.00
53_Y	88_M	1.618	1.00
19_D	23_H	1.612	1.00
382_D	386_R	1.601	1.00
5_T	32_A	1.601	1.00
83_Q	87_D	1.567	1.00
193_T	201_M	1.557	1.00
27_H	288_N	1.549	1.00
226_M	360_N	1.538	1.00
138_A	141_Q	1.509	1.00
159_S	268_L	1.493	1.00
312_Y	322_M	1.493	1.00
30_V	33_L	1.486	1.00
10_T	35_A	1.485	1.00
236_R	246_M	1.483	1.00
133_R	137_D	1.483	1.00
29_R	52_R	1.482	1.00
196_R	199_A	1.478	1.00
324_A	364_L	1.472	1.00
32_A	88_M	1.470	1.00
345_A	393_V	1.464	1.00
380_S	383_A	1.458	1.00
259_M	299_F	1.452	1.00
41_R	45_Q	1.440	1.00
39_V	56_M	1.440	1.00
115_R	142_S	1.438	1.00
207_C	219_S	1.437	1.00
207_C	220_V	1.430	1.00
31_V	91_L	1.430	1.00
82_Q	108_L	1.425	1.00
2_K	119_T	1.424	1.00
232_Y	248_V	1.422	1.00
363_V	388_V	1.421	1.00
236_R	325_F	1.419	1.00
55_V	88_M	1.411	1.00
226_M	317_C	1.408	1.00
114_I	144_A	1.407	1.00
345_A	350_Q	1.399	1.00
54_A	76_T	1.398	1.00
34_V	85_A	1.393	1.00
36_G	57_D	1.386	1.00
316_P	361_L	1.381	1.00
359_L	389_A	1.381	1.00
229_G	321_A	1.369	1.00
351_I	355_D	1.363	1.00
110_T	120_I	1.362	1.00
15_C	45_Q	1.360	1.00
34_V	88_M	1.356	1.00
317_C	360_N	1.350	1.00
387_E	391_K	1.342	1.00
225_M	312_Y	1.333	1.00
247_E	309_A	1.330	1.00
62_A	66_K	1.326	0.99
37_K	58_D	1.322	0.99
114_I	120_I	1.317	0.99
317_C	357_A	1.311	0.99
366_K	388_V	1.291	0.99
310_P	318_L	1.287	0.99
98_M	149_V	1.284	0.99
163_P	262_Y	1.279	0.99
43_V	65_L	1.274	0.99
189_P	315_Y	1.269	0.99
52_R	93_D	1.266	0.99
383_A	387_E	1.265	0.99
202_T	205_Q	1.264	0.99
15_C	41_R	1.261	0.99
127_S	135_F	1.259	0.99
61_S	64_L	1.259	0.99
212_W	254_S	1.255	0.99
130_T	378_V	1.247	0.99
133_R	237_W	1.239	0.99
198_L	354_T	1.237	0.99
362_S	365_E	1.236	0.99
181_I	241_A	1.235	0.99
55_V	79_L	1.233	0.99
191_R	252_P	1.225	0.99
31_V	52_R	1.211	0.99
98_M	121_L	1.208	0.99
58_D	61_S	1.200	0.99
236_R	242_S	1.198	0.99
236_R	243_A	1.190	0.99
44_E	48_E	1.188	0.99
301_K	309_A	1.187	0.99
174_E	177_G	1.184	0.99
380_S	384_N	1.184	0.99
203_P	347_L	1.169	0.99
388_V	391_K	1.168	0.99
96_Q	284_M	1.167	0.99
334_A	367_M	1.161	0.99
46_C	69_L	1.160	0.99
86_C	108_L	1.137	0.98
35_A	56_M	1.136	0.98
33_L	42_M	1.127	0.98
35_A	42_M	1.126	0.98
56_M	61_S	1.123	0.98
40_T	64_L	1.117	0.98
373_Q	377_D	1.116	0.98
258_S	270_Q	1.112	0.98
385_A	389_A	1.107	0.98
77_E	87_D	1.103	0.98
40_T	44_E	1.101	0.98
40_T	68_M	1.100	0.98
220_V	347_L	1.095	0.98
39_V	65_L	1.094	0.98
182_L	247_E	1.092	0.98
327_Q	331_A	1.091	0.98
108_L	379_L	1.091	0.98
216_R	348_A	1.090	0.98
259_M	267_V	1.089	0.98
341_I	389_A	1.089	0.98
46_C	51_P	1.086	0.98
195_L	354_T	1.075	0.98
370_R	373_Q	1.074	0.98
300_C	309_A	1.074	0.98
154_N	282_H	1.074	0.98
4_L	96_Q	1.073	0.98
359_L	392_E	1.071	0.98
342_T	360_N	1.068	0.98
236_R	240_N	1.066	0.98
53_Y	91_L	1.064	0.98
285_A	290_V	1.061	0.98
319_K	361_L	1.061	0.98
115_R	141_Q	1.060	0.98
52_R	77_E	1.048	0.97
163_P	268_L	1.046	0.97
3_Q	95_D	1.040	0.97
23_H	293_G	1.039	0.97
3_Q	31_V	1.038	0.97
177_G	263_Q	1.027	0.97
117_G	142_S	1.026	0.97
224_T	356_I	1.024	0.97
190_F	206_A	1.024	0.97
381_V	385_A	1.016	0.97
311_D	314_R	1.015	0.97
217_K	339_N	1.014	0.97
96_Q	121_L	1.014	0.97
323_E	327_Q	1.006	0.97
367_M	384_N	1.001	0.96
138_A	142_S	0.999	0.96
194_P	314_R	0.999	0.96
17_T	284_M	0.997	0.96
9_S	41_R	0.994	0.96
55_V	84_A	0.986	0.96
232_Y	246_M	0.986	0.96
104_A	130_T	0.982	0.96
9_S	33_L	0.977	0.96
299_F	302_L	0.974	0.96
63_K	67_T	0.973	0.96
323_E	365_E	0.968	0.96
149_V	283_T	0.965	0.96
199_A	358_A	0.960	0.96
37_K	61_S	0.952	0.95
56_M	62_A	0.948	0.95
362_S	392_E	0.945	0.95
28_F	285_A	0.942	0.95
63_K	66_K	0.939	0.95
94_V	97_V	0.938	0.95
112_A	116_A	0.935	0.95
154_N	283_T	0.929	0.95
43_V	47_L	0.928	0.95
194_P	198_L	0.928	0.95
28_F	290_V	0.927	0.95
64_L	68_M	0.922	0.94
121_L	149_V	0.921	0.94
225_M	314_R	0.920	0.94
341_I	382_D	0.918	0.94
5_T	88_M	0.916	0.94
30_V	45_Q	0.916	0.94
47_L	74_S	0.916	0.94
111_L	135_F	0.913	0.94
157_F	286_W	0.912	0.94
114_I	138_A	0.912	0.94
31_V	94_V	0.910	0.94
189_P	192_E	0.907	0.94
96_Q	119_T	0.906	0.94
207_C	216_R	0.904	0.94
21_V	28_F	0.904	0.94
59_E	63_K	0.902	0.94
241_A	245_Q	0.902	0.94
47_L	73_G	0.901	0.94
97_V	118_K	0.900	0.94
323_E	326_E	0.900	0.94
384_N	388_V	0.898	0.94
362_S	366_K	0.892	0.93
211_N	272_G	0.891	0.93
230_L	339_N	0.889	0.93
189_P	250_I	0.889	0.93
193_T	314_R	0.888	0.93
200_T	352_R	0.885	0.93
342_T	359_L	0.883	0.93
24_N	285_A	0.874	0.93
203_P	219_S	0.873	0.93
195_L	199_A	0.870	0.93
262_Y	268_L	0.869	0.93
208_R	219_S	0.868	0.92
18_L	22_R	0.863	0.92
192_E	252_P	0.859	0.92
176_N	263_Q	0.858	0.92
104_A	382_D	0.856	0.92
157_F	287_P	0.856	0.92
99_A	120_I	0.854	0.92
197_D	205_Q	0.854	0.92
206_A	220_V	0.854	0.92
316_P	358_A	0.853	0.92
182_L	261_R	0.852	0.92
357_A	360_N	0.852	0.92
299_F	303_S	0.851	0.92
19_D	22_R	0.850	0.92
248_V	318_L	0.849	0.92
320_L	361_L	0.849	0.92
194_P	199_A	0.847	0.92
376_D	380_S	0.847	0.92
114_I	135_F	0.846	0.91
136_M	237_W	0.842	0.91
256_I	259_M	0.842	0.91
113_A	120_I	0.841	0.91
350_Q	390_R	0.841	0.91
32_A	53_Y	0.838	0.91
90_A	112_A	0.837	0.91
101_I	105_A	0.836	0.91
272_G	278_T	0.836	0.91
99_A	127_S	0.831	0.91
334_A	363_V	0.829	0.91
79_L	88_M	0.826	0.90
177_G	288_N	0.825	0.90
351_I	359_L	0.825	0.90
59_E	80_S	0.825	0.90
99_A	110_T	0.824	0.90
248_V	310_P	0.823	0.90
66_K	70_Q	0.821	0.90
341_I	344_A	0.820	0.90
263_Q	291_N	0.819	0.90
6_I	30_V	0.819	0.90
281_A	285_A	0.816	0.90
46_C	76_T	0.815	0.90
92_E	118_K	0.814	0.90
16_S	19_D	0.814	0.90
93_D	118_K	0.813	0.90
185_G	225_M	0.813	0.90
359_L	363_V	0.811	0.90
130_T	333_T	0.811	0.90
156_I	258_S	0.810	0.90
384_N	387_E	0.807	0.89
330_A	369_M	0.806	0.89
62_A	78_V	0.806	0.89
195_L	314_R	0.803	0.89
251_H	305_L	0.802	0.89
24_N	290_V	0.801	0.89
64_L	67_T	0.800	0.89
198_L	314_R	0.792	0.89
119_T	144_A	0.792	0.89
256_I	269_A	0.791	0.88
114_I	139_V	0.788	0.88
86_C	90_A	0.784	0.88
232_Y	243_A	0.783	0.88
5_T	94_V	0.782	0.88
195_L	357_A	0.782	0.88
195_L	313_D	0.780	0.88
31_V	53_Y	0.777	0.88
367_M	388_V	0.777	0.88
217_K	221_D	0.776	0.88
341_I	345_A	0.774	0.87
162_Q	268_L	0.768	0.87
66_K	77_E	0.767	0.87
5_T	89_A	0.765	0.87
62_A	80_S	0.765	0.87
136_M	139_V	0.764	0.87
372_P	377_D	0.762	0.87
39_V	61_S	0.760	0.86
324_A	332_T	0.760	0.86
85_A	101_I	0.757	0.86
182_L	300_C	0.753	0.86
300_C	303_S	0.751	0.86
341_I	386_R	0.749	0.86
388_V	392_E	0.745	0.85
316_P	319_K	0.744	0.85
327_Q	369_M	0.744	0.85
55_V	85_A	0.743	0.85
59_E	83_Q	0.743	0.85
320_L	335_L	0.743	0.85
250_I	315_Y	0.741	0.85
232_Y	325_F	0.739	0.85
333_T	381_V	0.739	0.85
237_W	240_N	0.737	0.85
336_N	339_N	0.735	0.85
375_V	379_L	0.732	0.84
334_A	381_V	0.731	0.84
178_V	260_V	0.728	0.84
335_L	364_L	0.726	0.84
322_M	325_F	0.722	0.84
195_L	225_M	0.721	0.83
128_L	136_M	0.720	0.83
82_Q	86_C	0.718	0.83
69_L	74_S	0.718	0.83
387_E	390_R	0.718	0.83
159_S	262_Y	0.717	0.83
6_I	17_T	0.716	0.83
16_S	99_A	0.715	0.83
98_M	284_M	0.715	0.83
322_M	326_E	0.714	0.83
114_I	142_S	0.714	0.83
256_I	305_L	0.713	0.83
86_C	112_A	0.709	0.82
111_L	375_V	0.709	0.82
224_T	353_F	0.709	0.82
308_A	315_Y	0.707	0.82
278_T	294_V	0.706	0.82
229_G	332_T	0.705	0.82
250_I	308_A	0.705	0.82
155_A	258_S	0.704	0.82
23_H	291_N	0.703	0.82
313_D	319_K	0.703	0.82
189_P	308_A	0.701	0.82
39_V	43_V	0.700	0.82
247_E	300_C	0.700	0.82
16_S	277_R	0.700	0.82
255_V	271_L	0.700	0.82
330_A	372_P	0.692	0.81
211_N	254_S	0.691	0.81
250_I	314_R	0.686	0.80
53_Y	77_E	0.685	0.80
24_N	27_H	0.684	0.80
161_P	282_H	0.684	0.80
70_Q	73_G	0.684	0.80
179_V	263_Q	0.684	0.80
179_V	265_G	0.683	0.80
273_E	294_V	0.683	0.80
9_S	15_C	0.682	0.80
158_Q	289_R	0.681	0.80
163_P	177_G	0.680	0.80
178_V	241_A	0.678	0.80
345_A	389_A	0.677	0.79
3_Q	93_D	0.676	0.79
42_M	45_Q	0.675	0.79
193_T	198_L	0.675	0.79
161_P	268_L	0.673	0.79
203_P	207_C	0.672	0.79
124_N	127_S	0.668	0.78
27_H	285_A	0.666	0.78
250_I	310_P	0.665	0.78
20_V	281_A	0.664	0.78
247_E	261_R	0.663	0.78
81_G	84_A	0.662	0.78
42_M	61_S	0.661	0.78
271_L	305_L	0.659	0.78
83_Q	86_C	0.659	0.78
325_F	332_T	0.658	0.77
5_T	31_V	0.655	0.77
199_A	352_R	0.654	0.77
204_D	216_R	0.653	0.77
372_P	378_V	0.652	0.77
333_T	378_V	0.650	0.77
199_A	354_T	0.649	0.76
136_M	240_N	0.644	0.76
255_V	302_L	0.643	0.76
256_I	307_F	0.643	0.76
44_E	47_L	0.639	0.75
79_L	87_D	0.639	0.75
359_L	393_V	0.634	0.75
104_A	379_L	0.633	0.75
23_H	277_R	0.631	0.74
39_V	42_M	0.631	0.74
259_M	269_A	0.629	0.74
243_A	322_M	0.629	0.74
229_G	317_C	0.626	0.74
36_G	85_A	0.624	0.74
108_L	112_A	0.623	0.74
205_Q	208_R	0.623	0.74
216_R	347_L	0.622	0.73
105_A	382_D	0.622	0.73
220_V	343_V	0.621	0.73
82_Q	105_A	0.619	0.73
127_S	131_C	0.617	0.73
249_L	300_C	0.616	0.73
358_A	362_S	0.616	0.73
2_K	96_Q	0.615	0.73
91_L	94_V	0.613	0.72
84_A	87_D	0.610	0.72
267_V	297_L	0.610	0.72
60_A	64_L	0.610	0.72
345_A	390_R	0.607	0.72
200_T	203_P	0.607	0.72
97_V	113_A	0.607	0.72
299_F	305_L	0.606	0.71
46_C	78_V	0.605	0.71
25_P	28_F	0.604	0.71
256_I	302_L	0.601	0.71
331_A	369_M	0.600	0.71
147_L	154_N	0.599	0.71
195_L	358_A	0.599	0.71
111_L	115_R	0.597	0.70
5_T	53_Y	0.595	0.70
97_V	116_A	0.593	0.70
330_A	377_D	0.591	0.70
324_A	331_A	0.589	0.69
121_L	154_N	0.589	0.69
182_L	267_V	0.588	0.69
232_Y	236_R	0.588	0.69
252_P	308_A	0.586	0.69
12_S	213_S	0.586	0.69
207_C	347_L	0.585	0.69
65_L	78_V	0.585	0.69
381_V	384_N	0.584	0.69
12_S	16_S	0.583	0.69
323_E	361_L	0.582	0.68
34_V	57_D	0.582	0.68
225_M	315_Y	0.581	0.68
65_L	69_L	0.581	0.68
261_R	296_P	0.579	0.68
194_P	201_M	0.579	0.68
106_G	110_T	0.579	0.68
46_C	65_L	0.578	0.68
216_R	220_V	0.577	0.68
130_T	133_R	0.576	0.68
182_L	259_M	0.575	0.68
50_S	75_R	0.575	0.68
233_I	243_A	0.573	0.67
120_I	135_F	0.572	0.67
345_A	359_L	0.571	0.67
195_L	250_I	0.570	0.67
329_Q	333_T	0.570	0.67
262_Y	265_G	0.569	0.67
252_P	265_G	0.567	0.66
59_E	82_Q	0.566	0.66
259_M	300_C	0.566	0.66
329_Q	332_T	0.566	0.66
373_Q	378_V	0.565	0.66
40_T	43_V	0.565	0.66
203_P	208_R	0.565	0.66
139_V	142_S	0.565	0.66
111_L	134_L	0.564	0.66
378_V	381_V	0.562	0.66
79_L	84_A	0.562	0.66
189_P	219_S	0.562	0.66
39_V	68_M	0.561	0.66
189_P	201_M	0.560	0.65
329_Q	381_V	0.559	0.65
207_C	343_V	0.558	0.65
360_N	364_L	0.555	0.65
281_A	290_V	0.555	0.65
157_F	161_P	0.554	0.65
87_D	90_A	0.553	0.65
324_A	335_L	0.553	0.65
325_F	329_Q	0.552	0.64
192_E	225_M	0.551	0.64
156_I	239_F	0.551	0.64
290_V	293_G	0.547	0.64
50_S	74_S	0.547	0.64
243_A	326_E	0.547	0.64
39_V	64_L	0.546	0.64
53_Y	94_V	0.544	0.63
74_S	78_V	0.544	0.63
57_D	84_A	0.544	0.63
32_A	55_V	0.544	0.63
160_L	262_Y	0.542	0.63
15_C	19_D	0.542	0.63
265_G	296_P	0.542	0.63
54_A	78_V	0.540	0.63
32_A	94_V	0.540	0.63
120_I	144_A	0.537	0.62
197_D	200_T	0.536	0.62
77_E	92_E	0.536	0.62
34_V	55_V	0.535	0.62
9_S	34_V	0.535	0.62
69_L	73_G	0.535	0.62
306_T	309_A	0.535	0.62
161_P	262_Y	0.535	0.62
69_L	78_V	0.534	0.62
120_I	127_S	0.533	0.62
359_L	362_S	0.531	0.61
159_S	289_R	0.531	0.61
330_A	333_T	0.530	0.61
89_A	94_V	0.530	0.61
266_S	270_Q	0.530	0.61
297_L	303_S	0.530	0.61
201_M	223_A	0.529	0.61
135_F	138_A	0.528	0.61
203_P	216_R	0.528	0.61
160_L	178_V	0.528	0.61
31_V	93_D	0.525	0.61
19_D	275_D	0.524	0.60
161_P	177_G	0.524	0.60
99_A	146_L	0.523	0.60
69_L	76_T	0.522	0.60
334_A	384_N	0.522	0.60
330_A	373_Q	0.522	0.60
55_V	94_V	0.521	0.60
355_D	359_L	0.521	0.60
114_I	127_S	0.518	0.60
90_A	115_R	0.517	0.59
312_Y	318_L	0.515	0.59
32_A	91_L	0.515	0.59
45_Q	51_P	0.514	0.59
147_L	157_F	0.513	0.59
107_L	135_F	0.512	0.59
192_E	250_I	0.512	0.59
267_V	271_L	0.512	0.59
122_L	146_L	0.512	0.59
337_A	382_D	0.511	0.59
58_D	80_S	0.511	0.59
110_T	135_F	0.511	0.59
43_V	64_L	0.510	0.58
191_R	314_R	0.510	0.58
330_A	370_R	0.505	0.58
87_D	91_L	0.505	0.58
57_D	85_A	0.503	0.57
229_G	318_L	0.503	0.57
175_Q	240_N	0.502	0.57
204_D	207_C	0.501	0.57
43_V	74_S	0.500	0.57
299_F	304_A	0.500	0.57
319_K	326_E	0.500	0.57

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1q0qA	2	1	100	0.008	Contact Map
3au8A	2	0.9874	100	0.014	Contact Map
4zn6A	2	0.9824	100	0.02	Contact Map
4y67A	2	0.9975	100	0.021	Contact Map
3a06A	2	0.9246	100	0.039	Contact Map
2y1eA	2	0.9422	100	0.095	Contact Map
1r0kA	2	0.9623	100	0.13	Contact Map
3uplA	2	0.8467	99.9	0.84	Contact Map
3ingA	2	0.696	99.9	0.852	Contact Map
3do5A	2	0.706	99.9	0.857	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0119 seconds.