UXAA - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

UXAA - Altronate dehydratase

UniProt:	P42604	Sequences: MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGLPIGYALADIAAGVHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12734
Length:	495 (484)
Sequences:	1512 (936)
Seq/√Len:	42.5

ECOLI - UXAA GARD
BACSU - UXAA GARD
SULSO - Q97YR2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
469_E	474_K	6.008	1.00
112_R	257_E	4.948	1.00
109_Q	252_P	4.824	1.00
279_L	413_S	4.057	1.00
314_D	317_T	3.820	1.00
283_S	293_T	3.820	1.00
255_L	468_V	3.819	1.00
112_R	251_E	3.772	1.00
315_E	319_E	3.468	1.00
19_L	34_L	3.456	1.00
112_R	253_G	3.431	1.00
65_A	69_I	3.337	1.00
445_F	463_F	3.296	1.00
13_A	46_L	3.198	1.00
294_V	407_C	3.126	1.00
278_M	463_F	3.071	1.00
48_D	71_A	3.041	1.00
391_A	405_A	2.937	1.00
36_Q	73_V	2.906	1.00
319_E	323_T	2.893	1.00
446_D	452_H	2.885	1.00
257_E	384_P	2.789	1.00
50_A	53_A	2.779	1.00
190_G	245_M	2.750	1.00
477_C	480_R	2.733	1.00
140_I	234_G	2.662	1.00
51_K	68_D	2.647	1.00
50_A	68_D	2.608	1.00
433_S	437_A	2.582	1.00
55_V	80_T	2.528	1.00
292_T	387_N	2.526	1.00
466_T	474_K	2.484	1.00
34_L	44_F	2.420	1.00
48_D	70_A	2.414	1.00
430_A	443_I	2.376	1.00
449_Q	462_E	2.346	1.00
330_Q	334_A	2.311	1.00
118_V	253_G	2.300	1.00
465_D	469_E	2.279	1.00
45_A	69_I	2.257	1.00
70_A	73_V	2.254	1.00
21_E	37_D	2.224	1.00
111_Y	119_G	2.223	1.00
106_R	465_D	2.215	1.00
253_G	257_E	2.208	1.00
153_G	246_R	2.082	0.99
191_A	241_L	2.070	0.99
450_L	456_M	2.062	0.99
459_L	462_E	2.047	0.99
411_L	429_I	2.047	0.99
49_I	69_I	2.035	0.99
320_K	373_D	2.025	0.99
427_V	470_F	2.018	0.99
446_D	449_Q	2.014	0.99
17_A	23_T	2.008	0.99
403_A	424_V	2.007	0.99
49_I	65_A	1.963	0.99
64_Y	83_N	1.941	0.99
15_A	19_L	1.929	0.99
313_R	372_V	1.924	0.99
125_W	189_A	1.917	0.99
244_V	247_N	1.908	0.99
20_A	37_D	1.895	0.99
372_V	383_T	1.894	0.99
285_Y	461_E	1.870	0.99
107_E	252_P	1.844	0.98
286_V	291_G	1.839	0.98
34_L	38_V	1.824	0.98
233_A	236_E	1.812	0.98
220_H	240_Q	1.811	0.98
121_R	479_E	1.810	0.98
433_S	446_D	1.809	0.98
403_A	422_G	1.803	0.98
278_M	450_L	1.802	0.98
429_I	447_A	1.800	0.98
466_T	469_E	1.796	0.98
312_C	321_L	1.792	0.98
261_G	410_V	1.787	0.98
11_N	49_I	1.785	0.98
120_V	408_H	1.763	0.98
449_Q	459_L	1.740	0.98
227_Q	233_A	1.736	0.98
49_I	53_A	1.726	0.98
20_A	23_T	1.712	0.97
106_R	468_V	1.710	0.97
132_C	199_C	1.707	0.97
137_A	195_I	1.696	0.97
433_S	448_G	1.693	0.97
132_C	166_C	1.692	0.97
313_R	370_V	1.690	0.97
35_R	70_A	1.690	0.97
278_M	445_F	1.689	0.97
48_D	68_D	1.686	0.97
313_R	383_T	1.674	0.97
326_N	329_K	1.651	0.97
281_R	457_P	1.610	0.96
166_C	199_C	1.608	0.96
11_N	47_T	1.608	0.96
466_T	470_F	1.594	0.96
19_L	44_F	1.592	0.96
434_E	438_K	1.584	0.96
313_R	317_T	1.581	0.96
461_E	465_D	1.573	0.96
434_E	437_A	1.557	0.96
124_L	238_L	1.556	0.96
396_A	420_Y	1.554	0.95
455_A	458_Q	1.553	0.95
409_M	467_I	1.551	0.95
109_Q	474_K	1.549	0.95
140_I	231_I	1.540	0.95
128_P	137_A	1.535	0.95
399_T	422_G	1.520	0.95
260_F	282_F	1.510	0.95
373_D	383_T	1.503	0.95
445_F	466_T	1.503	0.95
35_R	73_V	1.500	0.95
422_G	426_T	1.489	0.94
263_E	296_T	1.474	0.94
184_V	207_F	1.461	0.94
375_L	387_N	1.456	0.94
47_T	53_A	1.450	0.93
430_A	436_A	1.446	0.93
244_V	248_D	1.445	0.93
140_I	195_I	1.440	0.93
278_M	460_L	1.423	0.93
436_A	443_I	1.416	0.93
285_Y	460_L	1.415	0.93
437_A	440_K	1.405	0.92
263_E	402_L	1.391	0.92
197_L	225_Q	1.372	0.91
67_A	73_V	1.370	0.91
289_N	464_I	1.365	0.91
282_F	463_F	1.359	0.91
124_L	245_M	1.353	0.91
427_V	466_T	1.348	0.91
132_C	225_Q	1.348	0.91
294_V	381_L	1.345	0.91
436_A	446_D	1.343	0.90
14_V	57_K	1.337	0.90
117_D	380_R	1.335	0.90
143_R	235_I	1.328	0.90
60_L	307_L	1.322	0.90
285_Y	464_I	1.321	0.90
258_L	471_A	1.314	0.89
227_Q	230_E	1.307	0.89
18_D	40_R	1.303	0.89
167_S	201_N	1.296	0.89
376_R	379_E	1.277	0.88
166_C	225_Q	1.270	0.88
254_K	257_E	1.269	0.88
281_R	456_M	1.269	0.88
330_Q	333_I	1.267	0.88
11_N	56_I	1.256	0.87
18_D	37_D	1.256	0.87
80_T	353_T	1.256	0.87
321_L	388_L	1.251	0.87
296_T	402_L	1.245	0.87
177_R	202_N	1.242	0.87
199_C	225_Q	1.241	0.87
120_V	409_M	1.237	0.86
282_F	467_I	1.229	0.86
373_D	387_N	1.226	0.86
108_V	118_V	1.222	0.86
66_L	81_R	1.208	0.85
242_Y	246_R	1.208	0.85
236_E	240_Q	1.206	0.85
107_E	254_K	1.203	0.85
282_F	286_V	1.203	0.85
132_C	197_L	1.197	0.85
344_S	355_L	1.187	0.84
233_A	237_H	1.186	0.84
320_K	379_E	1.178	0.84
51_K	67_A	1.177	0.84
40_R	434_E	1.172	0.83
106_R	255_L	1.167	0.83
24_E	33_T	1.166	0.83
142_N	145_L	1.162	0.83
13_A	44_F	1.158	0.83
184_V	194_V	1.155	0.82
229_D	232_E	1.144	0.82
262_L	295_L	1.143	0.82
108_V	472_N	1.142	0.82
114_A	215_D	1.140	0.82
166_C	197_L	1.139	0.81
232_E	236_E	1.136	0.81
447_A	459_L	1.134	0.81
262_L	279_L	1.128	0.81
5_K	13_A	1.125	0.81
26_S	31_T	1.121	0.80
440_K	477_C	1.112	0.80
449_Q	454_K	1.108	0.80
317_T	373_D	1.108	0.80
304_A	360_L	1.103	0.79
261_G	283_S	1.097	0.79
167_S	394_N	1.096	0.79
106_R	464_I	1.094	0.79
23_T	34_L	1.090	0.78
263_E	399_T	1.090	0.78
369_S	372_V	1.081	0.78
36_Q	74_H	1.080	0.78
123_E	156_G	1.076	0.78
45_A	49_I	1.072	0.77
77_A	357_D	1.070	0.77
391_A	401_A	1.066	0.77
419_P	483_F	1.064	0.77
456_M	460_L	1.061	0.77
54_N	61_P	1.060	0.77
124_L	141_Q	1.057	0.76
246_R	249_K	1.054	0.76
92_Y	322_V	1.054	0.76
436_A	440_K	1.050	0.76
319_E	326_N	1.050	0.76
186_H	408_H	1.049	0.76
288_A	369_S	1.041	0.75
463_F	466_T	1.038	0.75
167_S	345_P	1.037	0.75
411_L	467_I	1.035	0.75
185_R	380_R	1.035	0.75
54_N	83_N	1.033	0.75
140_I	238_L	1.030	0.74
304_A	363_T	1.029	0.74
176_T	488_I	1.025	0.74
69_I	75_V	1.016	0.73
114_A	216_P	1.015	0.73
109_Q	249_K	1.005	0.73
167_S	344_S	1.004	0.72
307_L	360_L	0.998	0.72
24_E	31_T	0.996	0.72
312_C	317_T	0.993	0.72
450_L	459_L	0.992	0.72
220_H	237_H	0.992	0.72
109_Q	112_R	0.990	0.71
278_M	459_L	0.989	0.71
108_V	258_L	0.986	0.71
206_A	209_E	0.983	0.71
323_T	327_D	0.979	0.71
371_V	388_L	0.979	0.71
112_R	118_V	0.978	0.70
223_I	226_Q	0.974	0.70
5_K	46_L	0.968	0.70
54_N	64_Y	0.968	0.70
140_I	235_I	0.967	0.70
117_D	259_K	0.965	0.69
352_I	445_F	0.961	0.69
34_L	37_D	0.958	0.69
129_T	196_G	0.958	0.69
76_H	353_T	0.950	0.68
117_D	257_E	0.946	0.68
75_V	80_T	0.943	0.68
193_L	237_H	0.939	0.67
337_Q	355_L	0.939	0.67
18_D	39_A	0.939	0.67
260_F	409_M	0.938	0.67
222_M	230_E	0.938	0.67
433_S	452_H	0.937	0.67
301_M	371_V	0.930	0.67
304_A	343_P	0.921	0.66
106_R	289_N	0.919	0.66
138_R	161_S	0.918	0.66
251_E	257_E	0.917	0.65
373_D	381_L	0.916	0.65
163_T	487_A	0.915	0.65
399_T	410_V	0.914	0.65
263_E	398_A	0.909	0.65
407_C	423_F	0.905	0.64
108_V	471_A	0.904	0.64
278_M	282_F	0.901	0.64
431_T	450_L	0.899	0.64
153_G	242_Y	0.898	0.64
184_V	219_V	0.895	0.64
279_L	411_L	0.894	0.63
405_A	431_T	0.893	0.63
50_A	70_A	0.892	0.63
259_K	384_P	0.889	0.63
82_T	338_P	0.888	0.63
437_A	446_D	0.886	0.63
208_R	221_F	0.886	0.63
282_F	411_L	0.886	0.63
5_K	30_Q	0.885	0.63
111_Y	248_D	0.879	0.62
355_L	362_C	0.876	0.62
126_I	141_Q	0.872	0.62
120_V	472_N	0.872	0.62
266_G	395_D	0.869	0.61
181_Q	211_L	0.867	0.61
475_Q	480_R	0.867	0.61
179_M	378_G	0.866	0.61
282_F	460_L	0.866	0.61
21_E	34_L	0.863	0.61
153_G	249_K	0.862	0.61
135_G	138_R	0.860	0.60
281_R	460_L	0.860	0.60
316_A	320_K	0.853	0.60
274_T	451_I	0.851	0.60
130_V	225_Q	0.850	0.60
433_S	436_A	0.848	0.59
400_S	486_L	0.846	0.59
309_M	322_V	0.846	0.59
281_R	368_S	0.845	0.59
130_V	166_C	0.845	0.59
124_L	242_Y	0.841	0.59
60_L	360_L	0.839	0.59
398_A	407_C	0.838	0.58
104_A	461_E	0.838	0.58
222_M	233_A	0.834	0.58
326_N	330_Q	0.834	0.58
151_A	246_R	0.832	0.58
36_Q	44_F	0.830	0.58
237_H	240_Q	0.830	0.58
128_P	159_L	0.827	0.57
376_R	390_S	0.826	0.57
168_Q	176_T	0.825	0.57
92_Y	318_F	0.824	0.57
301_M	388_L	0.816	0.56
191_A	485_E	0.814	0.56
44_F	47_T	0.813	0.56
204_V	208_R	0.811	0.56
141_Q	157_V	0.803	0.55
190_G	248_D	0.801	0.55
177_R	210_T	0.799	0.55
166_C	198_G	0.796	0.55
191_A	218_R	0.794	0.54
9_L	59_G	0.791	0.54
395_D	418_T	0.789	0.54
132_C	198_G	0.788	0.54
207_F	211_L	0.788	0.54
109_Q	253_G	0.788	0.54
215_D	218_R	0.788	0.54
363_T	371_V	0.787	0.54
55_V	64_Y	0.786	0.54
460_L	463_F	0.785	0.53
169_L	201_N	0.785	0.53
179_M	182_N	0.783	0.53
47_T	50_A	0.782	0.53
465_D	468_V	0.782	0.53
399_T	420_Y	0.778	0.53
178_T	379_E	0.777	0.53
142_N	146_K	0.776	0.53
350_G	416_R	0.774	0.52
373_D	382_K	0.772	0.52
176_T	362_C	0.772	0.52
292_T	381_L	0.769	0.52
47_T	96_F	0.767	0.52
112_R	384_P	0.767	0.52
270_L	451_I	0.766	0.52
252_P	468_V	0.766	0.52
260_F	467_I	0.762	0.51
130_V	197_L	0.761	0.51
127_L	184_V	0.760	0.51
328_F	394_N	0.760	0.51
130_V	199_C	0.759	0.51
410_V	424_V	0.755	0.51
262_L	369_S	0.753	0.50
99_L	370_V	0.752	0.50
20_A	34_L	0.751	0.50
255_L	464_I	0.750	0.50
279_L	463_F	0.747	0.50
315_E	318_F	0.745	0.50
436_A	448_G	0.740	0.49
445_F	459_L	0.740	0.49
263_E	420_Y	0.739	0.49
339_I	355_L	0.739	0.49
283_S	369_S	0.735	0.49
203_Q	222_M	0.735	0.49
64_Y	85_S	0.734	0.49
343_P	348_K	0.734	0.49
21_E	50_A	0.733	0.49
377_Y	401_A	0.732	0.48
302_F	329_K	0.731	0.48
17_A	20_A	0.729	0.48
346_G	395_D	0.729	0.48
262_L	293_T	0.728	0.48
285_Y	288_A	0.727	0.48
175_N	491_S	0.726	0.48
183_M	423_F	0.724	0.48
101_A	105_D	0.723	0.48
55_V	67_A	0.722	0.48
375_L	381_L	0.721	0.47
36_Q	67_A	0.720	0.47
47_T	51_K	0.715	0.47
201_N	355_L	0.715	0.47
278_M	456_M	0.715	0.47
281_R	286_V	0.713	0.47
181_Q	185_R	0.712	0.47
53_A	65_A	0.711	0.47
245_M	248_D	0.709	0.46
299_P	339_I	0.708	0.46
460_L	464_I	0.707	0.46
476_T	479_E	0.707	0.46
329_K	339_I	0.706	0.46
296_T	391_A	0.706	0.46
291_G	409_M	0.705	0.46
61_P	64_Y	0.704	0.46
435_L	443_I	0.703	0.46
186_H	431_T	0.703	0.46
91_R	310_D	0.703	0.46
76_H	79_N	0.703	0.46
309_M	325_V	0.703	0.46
430_A	435_L	0.702	0.46
8_A	49_I	0.700	0.45
21_E	35_R	0.698	0.45
327_D	390_S	0.698	0.45
186_H	487_A	0.697	0.45
357_D	360_L	0.697	0.45
292_T	391_A	0.696	0.45
344_S	394_N	0.695	0.45
108_V	253_G	0.693	0.45
195_I	222_M	0.693	0.45
449_Q	453_G	0.693	0.45
67_A	78_H	0.692	0.45
314_D	465_D	0.691	0.45
117_D	384_P	0.690	0.45
306_Q	310_D	0.685	0.44
209_E	465_D	0.685	0.44
141_Q	159_L	0.685	0.44
60_L	306_Q	0.685	0.44
363_T	398_A	0.683	0.44
11_N	80_T	0.682	0.44
249_K	446_D	0.682	0.44
32_V	71_A	0.682	0.44
95_D	310_D	0.681	0.44
259_K	381_L	0.680	0.44
92_Y	97_Q	0.680	0.44
77_A	80_T	0.678	0.43
45_A	65_A	0.678	0.43
95_D	99_L	0.678	0.43
152_E	246_R	0.676	0.43
55_V	65_A	0.676	0.43
91_R	94_P	0.675	0.43
245_M	482_D	0.674	0.43
332_F	339_I	0.672	0.43
38_V	101_A	0.670	0.43
234_G	485_E	0.670	0.43
17_A	25_V	0.669	0.43
38_V	118_V	0.665	0.42
70_A	98_D	0.664	0.42
125_W	158_F	0.663	0.42
421_G	485_E	0.662	0.42
5_K	48_D	0.661	0.42
131_G	355_L	0.660	0.42
284_D	369_S	0.660	0.42
320_K	323_T	0.660	0.42
102_Q	105_D	0.659	0.42
19_L	23_T	0.659	0.42
145_L	156_G	0.659	0.42
105_D	254_K	0.659	0.42
270_L	274_T	0.658	0.42
332_F	439_K	0.658	0.42
284_D	368_S	0.656	0.41
401_A	488_I	0.655	0.41
278_M	447_A	0.654	0.41
15_A	44_F	0.654	0.41
49_I	71_A	0.653	0.41
218_R	248_D	0.652	0.41
90_Y	322_V	0.651	0.41
292_T	373_D	0.650	0.41
45_A	80_T	0.649	0.41
95_D	98_D	0.648	0.41
20_A	46_L	0.648	0.41
328_F	332_F	0.648	0.41
120_V	362_C	0.647	0.41
393_G	401_A	0.647	0.41
191_A	194_V	0.645	0.40
296_T	398_A	0.644	0.40
274_T	453_G	0.644	0.40
179_M	404_G	0.639	0.40
35_R	48_D	0.638	0.40
189_A	192_V	0.638	0.40
158_F	484_R	0.638	0.40
180_L	207_F	0.638	0.40
366_A	386_L	0.637	0.40
8_A	115_N	0.637	0.40
90_Y	95_D	0.637	0.40
38_V	44_F	0.636	0.40
68_D	93_Q	0.634	0.39
430_A	433_S	0.634	0.39
186_H	296_T	0.633	0.39
175_N	391_A	0.633	0.39
150_N	153_G	0.632	0.39
125_W	318_F	0.632	0.39
110_I	253_G	0.630	0.39
4_I	16_L	0.629	0.39
168_Q	172_D	0.629	0.39
201_N	337_Q	0.628	0.39
193_L	234_G	0.628	0.39
285_Y	289_N	0.628	0.39
379_E	382_K	0.628	0.39
318_F	322_V	0.627	0.39
85_S	88_D	0.626	0.39
118_V	286_V	0.625	0.39
23_T	314_D	0.625	0.39
465_D	474_K	0.623	0.38
82_T	343_P	0.623	0.38
138_R	142_N	0.623	0.38
135_G	396_A	0.622	0.38
23_T	37_D	0.621	0.38
133_V	224_C	0.620	0.38
267_S	352_I	0.620	0.38
162_H	263_E	0.620	0.38
418_T	488_I	0.619	0.38
160_F	242_Y	0.619	0.38
287_I	292_T	0.617	0.38
389_L	399_T	0.616	0.38
179_M	401_A	0.616	0.38
50_A	209_E	0.615	0.38
120_V	430_A	0.614	0.38
183_M	403_A	0.613	0.38
120_V	471_A	0.612	0.37
17_A	51_K	0.611	0.37
77_A	353_T	0.611	0.37
80_T	95_D	0.608	0.37
172_D	490_K	0.607	0.37
238_L	242_Y	0.607	0.37
92_Y	95_D	0.607	0.37
429_I	470_F	0.606	0.37
8_A	11_N	0.605	0.37
458_Q	461_E	0.605	0.37
396_A	418_T	0.605	0.37
420_Y	426_T	0.605	0.37
252_P	255_L	0.603	0.37
478_N	481_N	0.601	0.36
339_I	493_V	0.601	0.36
68_D	73_V	0.601	0.36
32_V	44_F	0.600	0.36
431_T	451_I	0.599	0.36
294_V	402_L	0.598	0.36
14_V	44_F	0.597	0.36
454_K	458_Q	0.596	0.36
332_F	355_L	0.596	0.36
108_V	468_V	0.596	0.36
477_C	481_N	0.595	0.36
61_P	446_D	0.595	0.36
130_V	342_N	0.594	0.36
35_R	46_L	0.594	0.36
195_I	234_G	0.593	0.36
115_N	408_H	0.593	0.36
337_Q	340_Y	0.590	0.35
149_N	153_G	0.589	0.35
259_K	407_C	0.589	0.35
458_Q	462_E	0.588	0.35
31_T	53_A	0.587	0.35
248_D	251_E	0.586	0.35
162_H	176_T	0.586	0.35
154_T	246_R	0.586	0.35
443_I	476_T	0.584	0.35
316_A	475_Q	0.583	0.35
410_V	422_G	0.583	0.35
418_T	442_W	0.582	0.35
68_D	436_A	0.582	0.35
119_G	187_P	0.582	0.35
184_V	192_V	0.582	0.35
278_M	285_Y	0.581	0.35
9_L	24_E	0.580	0.35
377_Y	398_A	0.579	0.35
34_L	39_A	0.579	0.35
35_R	71_A	0.578	0.34
217_E	244_V	0.578	0.34
167_S	362_C	0.578	0.34
47_T	71_A	0.578	0.34
169_L	338_P	0.578	0.34
439_K	442_W	0.577	0.34
253_G	408_H	0.577	0.34
55_V	69_I	0.577	0.34
74_H	77_A	0.576	0.34
90_Y	126_I	0.575	0.34
16_L	187_P	0.575	0.34
461_E	464_I	0.575	0.34
196_G	485_E	0.575	0.34
198_G	225_Q	0.574	0.34
231_I	456_M	0.572	0.34
222_M	237_H	0.571	0.34
342_N	355_L	0.570	0.34
82_T	356_E	0.570	0.34
320_K	376_R	0.569	0.34
125_W	423_F	0.569	0.34
282_F	293_T	0.569	0.34
251_E	465_D	0.568	0.34
68_D	71_A	0.568	0.34
317_T	384_P	0.566	0.33
173_H	202_N	0.566	0.33
156_G	476_T	0.565	0.33
25_V	32_V	0.565	0.33
220_H	241_L	0.565	0.33
20_A	67_A	0.564	0.33
106_R	285_Y	0.563	0.33
160_F	189_A	0.563	0.33
247_N	315_E	0.563	0.33
40_R	270_L	0.563	0.33
61_P	83_N	0.562	0.33
9_L	33_T	0.562	0.33
172_D	493_V	0.561	0.33
242_Y	352_I	0.559	0.33
20_A	35_R	0.559	0.33
394_N	493_V	0.557	0.33
312_C	379_E	0.556	0.33
92_Y	96_F	0.556	0.33
21_E	53_A	0.556	0.33
139_Q	142_N	0.556	0.33
270_L	431_T	0.554	0.32
304_A	307_L	0.554	0.32
194_V	207_F	0.554	0.32
386_L	445_F	0.553	0.32
48_D	314_D	0.553	0.32
194_V	219_V	0.551	0.32
26_S	96_F	0.551	0.32
311_H	386_L	0.551	0.32
32_V	46_L	0.551	0.32
201_N	345_P	0.550	0.32
19_L	50_A	0.549	0.32
338_P	419_P	0.549	0.32
394_N	418_T	0.549	0.32
114_A	217_E	0.548	0.32
74_H	78_H	0.547	0.32
270_L	448_G	0.545	0.32
102_Q	106_R	0.545	0.32
155_D	203_Q	0.544	0.32
181_Q	210_T	0.544	0.32
11_N	53_A	0.543	0.32
190_G	194_V	0.542	0.31
375_L	405_A	0.542	0.31
324_M	376_R	0.541	0.31
19_L	195_I	0.541	0.31
126_I	192_V	0.541	0.31
363_T	410_V	0.540	0.31
378_G	405_A	0.540	0.31
212_G	215_D	0.540	0.31
331_Y	348_K	0.540	0.31
381_L	387_N	0.540	0.31
462_E	477_C	0.540	0.31
196_G	357_D	0.539	0.31
456_M	459_L	0.539	0.31
197_L	416_R	0.538	0.31
301_M	324_M	0.538	0.31
357_D	421_G	0.538	0.31
135_G	486_L	0.536	0.31
50_A	93_Q	0.536	0.31
55_V	102_Q	0.536	0.31
260_F	402_L	0.535	0.31
167_S	176_T	0.535	0.31
421_G	484_R	0.533	0.31
8_A	34_L	0.533	0.31
307_L	364_Q	0.533	0.31
5_K	11_N	0.533	0.31
91_R	95_D	0.532	0.31
372_V	375_L	0.532	0.31
170_G	337_Q	0.532	0.31
135_G	159_L	0.531	0.31
30_Q	46_L	0.531	0.31
167_S	342_N	0.530	0.30
46_L	71_A	0.529	0.30
139_Q	231_I	0.529	0.30
133_V	355_L	0.529	0.30
132_C	416_R	0.528	0.30
90_Y	309_M	0.528	0.30
110_I	181_Q	0.528	0.30
341_E	493_V	0.528	0.30
94_P	97_Q	0.525	0.30
21_E	36_Q	0.525	0.30
366_A	398_A	0.525	0.30
108_V	254_K	0.525	0.30
281_R	461_E	0.525	0.30
47_T	191_A	0.524	0.30
96_F	313_R	0.524	0.30
205_A	209_E	0.523	0.30
127_L	186_H	0.523	0.30
24_E	32_V	0.522	0.30
25_V	56_I	0.522	0.30
169_L	419_P	0.521	0.30
90_Y	93_Q	0.520	0.30
169_L	173_H	0.520	0.30
9_L	70_A	0.520	0.30
296_T	399_T	0.519	0.30
53_A	68_D	0.519	0.30
9_L	47_T	0.518	0.30
179_M	400_S	0.518	0.30
225_Q	416_R	0.518	0.30
419_P	439_K	0.517	0.29
135_G	484_R	0.517	0.29
307_L	363_T	0.517	0.29
157_V	242_Y	0.517	0.29
90_Y	318_F	0.517	0.29
128_P	161_S	0.516	0.29
90_Y	326_N	0.515	0.29
181_Q	254_K	0.515	0.29
259_K	292_T	0.514	0.29
119_G	248_D	0.514	0.29
110_I	118_V	0.514	0.29
138_R	333_I	0.513	0.29
4_I	270_L	0.513	0.29
373_D	379_E	0.512	0.29
32_V	68_D	0.512	0.29
190_G	241_L	0.512	0.29
295_L	393_G	0.512	0.29
137_A	424_V	0.511	0.29
4_I	38_V	0.510	0.29
9_L	21_E	0.510	0.29
149_N	239_H	0.510	0.29
306_Q	309_M	0.509	0.29
350_G	357_D	0.509	0.29
11_N	18_D	0.509	0.29
108_V	245_M	0.508	0.29
20_A	51_K	0.508	0.29
86_D	339_I	0.507	0.29
138_R	490_K	0.507	0.29
452_H	457_P	0.507	0.29
176_T	439_K	0.506	0.29
5_K	71_A	0.506	0.29
25_V	102_Q	0.505	0.29
66_L	77_A	0.505	0.29
275_A	413_S	0.505	0.29
395_D	416_R	0.504	0.28
427_V	476_T	0.504	0.28
44_F	209_E	0.504	0.28
23_T	51_K	0.503	0.28
136_I	231_I	0.503	0.28
93_Q	96_F	0.503	0.28
14_V	19_L	0.502	0.28
284_D	311_H	0.502	0.28
125_W	355_L	0.502	0.28
24_E	55_V	0.502	0.28
41_G	129_T	0.501	0.28
145_L	148_T	0.501	0.28
442_W	478_N	0.501	0.28
296_T	410_V	0.500	0.28
397_V	483_F	0.500	0.28
14_V	40_R	0.500	0.28

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3k3sA	2	0.1697	100	0.843	Contact Map
3lazA	2	0.1636	100	0.855	Contact Map
1ucsA	1	0.1273	71.1	0.979	Contact Map
4ur6A	2	0.1273	70.9	0.979	Contact Map
3teeA	1	0.2606	70.5	0.979	Contact Map
1msiA	1	0.1313	69.3	0.98	Contact Map
1wvoA	1	0.1455	66.7	0.98	Contact Map
3frnA	1	0.2424	63.6	0.98	Contact Map
1vliA	2	0.1697	61.8	0.981	Contact Map
3g8rA	2	0.1576	58.4	0.981	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.013 seconds.