PAT - ECOLI - GREMLIN Contacts

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PAT - Putrescine aminotransferase

UniProt:	P42588	Sequences: MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12718
Length:	459 (385)
Sequences:	20615 (12266)
Seq/√Len:	625.1

ECOLI - PAT ASTC ARGD BIOA GABT PUUE GSA
BACSU - YODT YHXA BIOK GSAB GABT GSA ARGD OAT
HALSA - GSA Q9HHV4 Q9HPQ4
SULSO - Q97VA7 ARGD Q97VB5 Q97U15 GSA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
108_Q	112_A	4.245	1.00
258_R	262_D	3.991	1.00
411_Q	447_K	3.900	1.00
75_T	83_E	3.524	1.00
215_I	256_A	3.522	1.00
365_M	439_E	3.358	1.00
132_T	348_N	3.158	1.00
70_A	77_V	3.061	1.00
282_K	288_H	2.850	1.00
354_N	357_A	2.827	1.00
365_M	435_I	2.763	1.00
102_V	352_E	2.731	1.00
376_E	446_R	2.651	1.00
105_S	109_N	2.633	1.00
358_Q	362_K	2.547	1.00
434_T	437_Q	2.516	1.00
211_P	217_A	2.440	1.00
87_C	441_V	2.358	1.00
132_T	351_L	2.325	1.00
369_G	442_I	2.323	1.00
256_A	259_K	2.279	1.00
345_A	348_N	2.278	1.00
102_V	345_A	2.252	1.00
259_K	263_E	2.193	1.00
361_Q	435_I	2.188	1.00
102_V	349_V	2.187	1.00
100_N	349_V	2.178	1.00
75_T	437_Q	2.161	1.00
219_R	263_E	2.155	1.00
69_Q	79_T	2.149	1.00
411_Q	451_A	2.124	1.00
407_E	410_R	2.118	1.00
407_E	451_A	2.030	1.00
77_V	83_E	1.999	1.00
377_Y	446_R	1.984	1.00
413_V	444_A	1.948	1.00
369_G	439_E	1.934	1.00
172_T	231_D	1.908	1.00
129_L	343_A	1.898	1.00
132_T	344_L	1.897	1.00
236_I	269_I	1.889	1.00
367_L	371_R	1.799	1.00
104_V	108_Q	1.799	1.00
364_D	368_D	1.792	1.00
143_Y	316_E	1.786	1.00
147_C	310_G	1.784	1.00
124_P	128_M	1.773	1.00
407_E	411_Q	1.769	1.00
218_M	257_V	1.768	1.00
349_V	353_Q	1.762	1.00
440_L	444_A	1.754	1.00
316_E	320_S	1.750	1.00
78_D	82_Q	1.746	1.00
235_V	261_C	1.742	1.00
107_V	342_A	1.732	1.00
82_Q	412_R	1.731	1.00
382_Q	396_V	1.730	1.00
131_K	135_A	1.729	1.00
172_T	208_R	1.726	1.00
177_S	211_P	1.705	1.00
69_Q	113_K	1.704	1.00
237_L	257_V	1.690	1.00
219_R	223_N	1.682	1.00
107_V	111_L	1.663	1.00
213_G	250_P	1.661	1.00
142_K	316_E	1.661	1.00
75_T	440_L	1.613	1.00
72_S	101_P	1.612	1.00
367_L	386_G	1.587	1.00
377_Y	450_A	1.586	1.00
369_G	372_Q	1.584	1.00
222_L	266_A	1.569	1.00
154_V	297_C	1.568	1.00
176_T	253_Y	1.551	1.00
298_L	311_A	1.545	1.00
83_E	440_L	1.536	1.00
282_K	360_E	1.532	1.00
130_A	146_F	1.526	1.00
307_M	339_A	1.506	1.00
369_G	443_K	1.506	1.00
303_G	309_I	1.498	1.00
210_V	221_A	1.495	1.00
362_K	365_M	1.479	1.00
164_Y	318_V	1.478	1.00
74_N	437_Q	1.468	1.00
362_K	438_C	1.454	1.00
216_E	220_T	1.441	1.00
137_T	313_I	1.435	1.00
109_N	113_K	1.434	1.00
74_N	432_T	1.425	1.00
219_R	256_A	1.424	1.00
252_G	255_T	1.416	1.00
367_L	391_M	1.410	1.00
132_T	135_A	1.405	1.00
78_D	84_F	1.381	1.00
270_L	286_C	1.381	1.00
298_L	313_I	1.374	1.00
345_A	349_V	1.373	1.00
128_M	344_L	1.372	1.00
174_I	232_V	1.369	1.00
258_R	268_M	1.358	1.00
173_F	234_A	1.357	1.00
407_E	448_A	1.347	1.00
358_Q	361_Q	1.346	1.00
144_S	313_I	1.344	1.00
408_M	415_V	1.344	1.00
258_R	261_C	1.340	1.00
309_I	340_C	1.338	1.00
161_A	269_I	1.336	1.00
411_Q	448_A	1.334	1.00
101_P	105_S	1.330	1.00
371_R	374_A	1.330	1.00
156_A	312_T	1.328	1.00
344_L	348_N	1.324	1.00
158_L	173_F	1.324	1.00
68_W	76_L	1.324	1.00
175_A	209_H	1.316	1.00
215_I	260_L	1.311	1.00
282_K	287_E	1.310	1.00
365_M	369_G	1.309	1.00
128_M	348_N	1.306	1.00
369_G	446_R	1.301	1.00
157_A	297_C	1.298	1.00
190_A	207_F	1.296	1.00
136_L	351_L	1.292	1.00
302_L	309_I	1.287	1.00
446_R	450_A	1.278	1.00
216_E	219_R	1.275	1.00
100_N	353_Q	1.274	1.00
373_L	442_I	1.273	1.00
237_L	254_L	1.256	1.00
252_G	289_E	1.256	1.00
433_L	438_C	1.255	1.00
357_A	361_Q	1.254	1.00
223_N	264_F	1.253	1.00
270_L	291_V	1.252	1.00
164_Y	321_V	1.250	1.00
283_M	287_E	1.245	1.00
135_A	351_L	1.242	1.00
362_K	435_I	1.240	1.00
134_A	144_S	1.236	1.00
235_V	257_V	1.235	1.00
154_V	236_I	1.232	1.00
302_L	311_A	1.230	1.00
70_A	113_K	1.223	1.00
309_I	343_A	1.223	1.00
286_C	296_L	1.221	1.00
107_V	338_L	1.221	1.00
72_S	99_R	1.219	1.00
289_E	387_K	1.210	1.00
373_L	446_R	1.207	1.00
143_Y	320_S	1.190	1.00
105_S	108_Q	1.188	1.00
106_A	345_A	1.187	1.00
295_I	314_A	1.183	1.00
96_V	349_V	1.175	1.00
348_N	352_E	1.159	1.00
292_Q	315_T	1.157	1.00
255_T	259_K	1.145	1.00
219_R	260_L	1.145	1.00
147_C	312_T	1.143	1.00
104_V	111_L	1.143	1.00
408_M	444_A	1.141	1.00
288_H	387_K	1.139	1.00
437_Q	440_L	1.138	1.00
170_K	265_G	1.137	1.00
104_V	112_A	1.130	1.00
267_L	318_V	1.127	1.00
108_Q	111_L	1.125	1.00
99_R	104_V	1.123	1.00
165_Q	233_A	1.119	1.00
75_T	85_I	1.114	1.00
190_A	236_I	1.094	1.00
72_S	83_E	1.089	1.00
443_K	447_K	1.085	1.00
295_I	312_T	1.083	1.00
413_V	441_V	1.082	1.00
146_F	340_C	1.070	1.00
278_G	356_P	1.070	1.00
356_P	359_A	1.070	1.00
408_M	413_V	1.066	1.00
368_D	372_Q	1.065	1.00
408_M	448_A	1.065	1.00
284_F	298_L	1.057	1.00
219_R	264_F	1.051	1.00
129_L	344_L	1.051	1.00
435_I	439_E	1.050	1.00
151_T	187_A	1.047	1.00
255_T	290_N	1.038	1.00
211_P	214_N	1.038	1.00
360_E	364_D	1.035	1.00
140_K	292_Q	1.033	1.00
212_F	249_P	1.024	1.00
349_V	352_E	1.019	1.00
74_N	85_I	1.018	1.00
261_C	266_A	1.017	1.00
219_R	259_K	1.015	1.00
411_Q	444_A	1.014	1.00
440_L	443_K	1.010	1.00
69_Q	124_P	1.008	1.00
160_L	312_T	0.995	1.00
158_L	190_A	0.992	1.00
304_G	346_T	0.990	1.00
103_V	342_A	0.983	1.00
175_A	236_I	0.979	1.00
69_Q	81_G	0.978	1.00
377_Y	380_L	0.972	1.00
281_G	287_E	0.971	1.00
257_V	268_M	0.969	1.00
208_R	221_A	0.968	1.00
350_L	355_L	0.967	1.00
439_E	443_K	0.962	1.00
96_V	346_T	0.953	1.00
189_S	204_L	0.936	1.00
403_N	407_E	0.933	1.00
136_L	283_M	0.933	1.00
153_S	297_C	0.932	1.00
95_N	301_A	0.932	1.00
240_I	387_K	0.931	1.00
72_S	77_V	0.930	1.00
374_A	381_V	0.929	1.00
176_T	212_F	0.926	1.00
350_L	356_P	0.925	1.00
436_E	439_E	0.923	1.00
358_Q	435_I	0.920	1.00
67_E	79_T	0.920	1.00
239_P	270_L	0.919	1.00
404_F	452_M	0.916	1.00
172_T	223_N	0.915	1.00
217_A	220_T	0.914	1.00
176_T	249_P	0.911	1.00
260_L	264_F	0.909	1.00
222_L	232_V	0.908	1.00
382_Q	394_E	0.907	1.00
341_A	345_A	0.907	1.00
392_A	424_T	0.906	1.00
259_K	262_D	0.902	1.00
355_L	359_A	0.901	1.00
151_T	184_S	0.895	1.00
94_F	304_G	0.894	1.00
277_M	350_L	0.891	1.00
85_I	437_Q	0.890	1.00
210_V	218_M	0.889	1.00
254_L	289_E	0.887	1.00
132_T	136_L	0.886	1.00
406_S	410_R	0.884	1.00
251_P	255_T	0.881	1.00
141_L	313_I	0.880	1.00
69_Q	77_V	0.880	1.00
357_A	360_E	0.878	1.00
87_C	433_L	0.875	1.00
394_E	423_K	0.874	1.00
74_N	434_T	0.872	1.00
105_S	112_A	0.871	1.00
67_E	127_A	0.867	1.00
248_L	387_K	0.861	1.00
288_H	360_E	0.861	1.00
234_A	269_I	0.860	1.00
109_N	112_A	0.858	1.00
172_T	232_V	0.855	1.00
85_I	440_L	0.854	1.00
148_N	152_E	0.853	1.00
171_F	206_G	0.851	1.00
171_F	231_D	0.851	1.00
383_E	394_E	0.849	1.00
102_V	105_S	0.845	1.00
210_V	217_A	0.843	1.00
102_V	348_N	0.838	1.00
369_G	438_C	0.838	1.00
161_A	234_A	0.831	1.00
229_G	264_F	0.831	1.00
96_V	103_V	0.828	1.00
252_G	256_A	0.825	1.00
87_C	413_V	0.824	1.00
160_L	314_A	0.823	1.00
157_A	269_I	0.821	1.00
307_M	338_L	0.820	1.00
371_R	375_R	0.816	1.00
136_L	347_I	0.812	1.00
164_Y	267_L	0.810	1.00
138_P	286_C	0.807	1.00
363_G	367_L	0.804	1.00
433_L	441_V	0.803	1.00
74_N	430_P	0.803	1.00
109_N	341_A	0.802	1.00
249_P	252_G	0.802	1.00
373_L	377_Y	0.799	1.00
389_M	433_L	0.798	1.00
161_A	267_L	0.798	1.00
258_R	291_V	0.797	1.00
79_T	124_P	0.796	1.00
277_M	347_I	0.795	1.00
265_G	317_E	0.795	1.00
165_Q	265_G	0.794	1.00
390_L	428_E	0.791	1.00
92_G	428_E	0.789	1.00
147_C	153_S	0.789	1.00
356_P	360_E	0.784	1.00
102_V	106_A	0.783	1.00
275_T	390_L	0.782	1.00
368_D	371_R	0.781	1.00
372_Q	376_E	0.779	1.00
163_A	328_L	0.777	1.00
376_E	450_A	0.773	1.00
218_M	235_V	0.773	1.00
134_A	141_L	0.772	1.00
129_L	340_C	0.771	1.00
262_D	292_Q	0.770	1.00
133_L	313_I	0.769	1.00
283_M	356_P	0.768	1.00
427_I	445_A	0.767	1.00
73_L	432_T	0.766	1.00
277_M	302_L	0.764	1.00
68_W	71_G	0.763	1.00
128_M	132_T	0.761	1.00
402_Y	406_S	0.761	1.00
235_V	266_A	0.758	1.00
262_D	268_M	0.757	1.00
242_G	274_Q	0.751	1.00
361_Q	365_M	0.750	1.00
261_C	268_M	0.748	1.00
158_L	236_I	0.747	1.00
395_F	404_F	0.746	1.00
286_C	291_V	0.745	1.00
331_T	334_G	0.743	1.00
85_I	441_V	0.743	1.00
385_R	394_E	0.741	1.00
125_L	341_A	0.738	1.00
144_S	311_A	0.737	1.00
404_F	445_A	0.736	1.00
448_A	452_M	0.735	1.00
139_G	296_L	0.735	1.00
372_Q	375_R	0.735	1.00
447_K	451_A	0.735	1.00
284_F	296_L	0.734	1.00
248_L	386_G	0.730	1.00
138_P	287_E	0.728	1.00
365_M	368_D	0.728	1.00
149_S	152_E	0.726	1.00
165_Q	169_G	0.724	1.00
240_I	280_T	0.724	1.00
239_P	254_L	0.724	1.00
88_L	416_A	0.722	1.00
161_A	295_I	0.721	1.00
106_A	342_A	0.720	1.00
132_T	347_I	0.719	1.00
256_A	260_L	0.718	1.00
298_L	302_L	0.717	1.00
407_E	452_M	0.715	1.00
103_V	304_G	0.713	1.00
277_M	298_L	0.713	1.00
174_I	218_M	0.713	1.00
232_V	266_A	0.713	1.00
359_A	363_G	0.711	1.00
110_Q	113_K	0.711	1.00
159_K	329_H	0.709	1.00
384_A	391_M	0.707	1.00
283_M	351_L	0.707	1.00
396_V	399_E	0.706	1.00
126_R	130_A	0.706	1.00
111_L	338_L	0.705	1.00
177_S	209_H	0.705	1.00
217_A	221_A	0.705	1.00
372_Q	446_R	0.704	1.00
220_T	227_K	0.702	1.00
154_V	187_A	0.702	1.00
404_F	448_A	0.701	1.00
228_T	231_D	0.700	1.00
280_T	288_H	0.696	1.00
176_T	210_V	0.696	1.00
222_L	260_L	0.696	1.00
197_R	201_M	0.695	1.00
386_G	391_M	0.694	1.00
141_L	296_L	0.693	1.00
125_L	129_L	0.691	1.00
405_A	417_G	0.689	1.00
89_G	428_E	0.689	1.00
160_L	322_L	0.689	1.00
441_V	444_A	0.688	1.00
127_A	131_K	0.688	1.00
164_Y	317_E	0.687	1.00
71_G	114_Q	0.685	1.00
268_M	291_V	0.684	1.00
242_G	390_L	0.683	1.00
125_L	344_L	0.681	1.00
99_R	111_L	0.679	1.00
277_M	283_M	0.679	1.00
125_L	340_C	0.678	1.00
384_A	393_I	0.676	1.00
394_E	424_T	0.674	1.00
325_N	328_L	0.674	1.00
363_G	386_G	0.674	1.00
317_E	320_S	0.672	1.00
123_D	126_R	0.672	1.00
82_Q	410_R	0.672	1.00
113_K	124_P	0.671	1.00
362_K	389_M	0.670	1.00
147_C	152_E	0.669	1.00
194_S	198_K	0.669	1.00
162_K	202_P	0.668	1.00
237_L	268_M	0.668	1.00
76_L	414_L	0.666	1.00
122_L	127_A	0.665	1.00
129_L	309_I	0.664	1.00
255_T	289_E	0.661	1.00
361_Q	364_D	0.661	1.00
377_Y	449_L	0.660	1.00
186_G	204_L	0.660	1.00
214_N	217_A	0.658	1.00
436_E	440_L	0.657	1.00
156_A	329_H	0.657	1.00
136_L	284_F	0.656	1.00
318_V	321_V	0.656	1.00
180_F	183_K	0.654	1.00
408_M	445_A	0.654	1.00
365_M	438_C	0.654	1.00
107_V	115_P	0.653	1.00
404_F	408_M	0.650	1.00
85_I	413_V	0.649	1.00
269_I	295_I	0.648	1.00
366_L	442_I	0.645	1.00
96_V	355_L	0.642	1.00
425_I	445_A	0.636	1.00
254_L	270_L	0.634	1.00
241_Q	244_G	0.634	1.00
395_F	449_L	0.633	1.00
222_L	264_F	0.632	1.00
362_K	433_L	0.632	1.00
374_A	383_E	0.631	1.00
393_I	445_A	0.630	1.00
278_G	350_L	0.630	1.00
273_V	297_C	0.630	1.00
315_T	318_V	0.630	1.00
137_T	296_L	0.629	1.00
374_A	384_A	0.629	1.00
442_I	446_R	0.627	1.00
403_N	406_S	0.624	1.00
170_K	266_A	0.623	1.00
172_T	206_G	0.622	1.00
358_Q	438_C	0.621	1.00
215_I	219_R	0.620	1.00
71_G	76_L	0.618	1.00
314_A	319_F	0.615	1.00
277_M	284_F	0.612	1.00
358_Q	434_T	0.609	1.00
157_A	295_I	0.609	1.00
427_I	441_V	0.608	1.00
448_A	451_A	0.608	1.00
413_V	440_L	0.605	1.00
111_L	342_A	0.605	1.00
241_Q	247_I	0.604	1.00
165_Q	170_K	0.604	1.00
194_S	197_R	0.603	1.00
138_P	141_L	0.603	1.00
362_K	434_T	0.602	1.00
342_A	345_A	0.600	1.00
137_T	298_L	0.600	1.00
359_A	431_L	0.600	1.00
137_T	284_F	0.600	1.00
110_Q	125_L	0.598	1.00
299_A	333_F	0.596	1.00
103_V	345_A	0.596	1.00
160_L	295_I	0.596	1.00
140_K	315_T	0.595	1.00
176_T	257_V	0.594	1.00
366_L	391_M	0.592	1.00
251_P	289_E	0.592	1.00
67_E	122_L	0.592	1.00
299_A	310_G	0.590	1.00
251_P	387_K	0.589	1.00
134_A	142_K	0.589	1.00
95_N	431_L	0.588	1.00
125_L	128_M	0.588	1.00
89_G	430_P	0.587	1.00
218_M	256_A	0.587	1.00
103_V	346_T	0.586	1.00
74_N	433_L	0.584	1.00
262_D	317_E	0.581	1.00
381_V	393_I	0.580	1.00
445_A	449_L	0.580	1.00
106_A	109_N	0.578	1.00
174_I	221_A	0.577	1.00
364_D	367_L	0.577	1.00
190_A	193_K	0.575	1.00
175_A	207_F	0.574	1.00
83_E	444_A	0.574	1.00
380_L	396_V	0.573	1.00
150_G	273_V	0.572	1.00
88_L	414_L	0.571	1.00
240_I	390_L	0.570	1.00
136_L	282_K	0.569	1.00
366_L	438_C	0.569	1.00
202_P	206_G	0.568	1.00
70_A	83_E	0.565	1.00
239_P	286_C	0.563	1.00
162_K	185_L	0.562	1.00
172_T	227_K	0.562	1.00
235_V	262_D	0.560	1.00
444_A	448_A	0.560	1.00
286_C	293_P	0.560	1.00
218_M	260_L	0.557	1.00
69_Q	72_S	0.557	1.00
110_Q	114_Q	0.556	1.00
134_A	313_I	0.555	1.00
283_M	347_I	0.555	1.00
129_L	146_F	0.555	1.00
170_K	231_D	0.554	1.00
260_L	263_E	0.554	1.00
406_S	409_F	0.554	1.00
366_L	369_G	0.554	1.00
95_N	350_L	0.552	1.00
393_I	427_I	0.551	1.00
444_A	447_K	0.551	1.00
239_P	275_T	0.550	1.00
381_V	449_L	0.548	1.00
274_Q	426_R	0.548	1.00
359_A	389_M	0.547	1.00
106_A	348_N	0.546	1.00
216_E	256_A	0.546	1.00
295_I	318_V	0.546	1.00
365_M	442_I	0.546	1.00
223_N	263_E	0.544	0.99
71_G	94_F	0.544	0.99
283_M	350_L	0.543	0.99
218_M	253_Y	0.543	0.99
243_E	426_R	0.542	0.99
369_G	373_L	0.541	0.99
85_I	433_L	0.540	0.99
66_V	69_Q	0.540	0.99
432_T	437_Q	0.539	0.99
176_T	237_L	0.539	0.99
257_V	266_A	0.539	0.99
248_L	289_E	0.538	0.99
385_R	392_A	0.538	0.99
345_A	352_E	0.537	0.99
215_I	257_V	0.536	0.99
96_V	100_N	0.536	0.99
433_L	437_Q	0.535	0.99
274_Q	390_L	0.533	0.99
344_L	351_L	0.533	0.99
409_F	414_L	0.530	0.99
134_A	137_T	0.529	0.99
72_S	75_T	0.528	0.99
192_A	209_H	0.528	0.99
183_K	327_F	0.527	0.99
104_V	304_G	0.527	0.99
374_A	449_L	0.525	0.99
121_L	414_L	0.524	0.99
210_V	253_Y	0.523	0.99
441_V	445_A	0.523	0.99
438_C	441_V	0.522	0.99
220_T	223_N	0.520	0.99
336_N	339_A	0.519	0.99
115_P	307_M	0.519	0.99
395_F	400_I	0.519	0.99
68_W	121_L	0.518	0.99
212_F	241_Q	0.517	0.99
113_K	125_L	0.517	0.99
208_R	232_V	0.517	0.99
430_P	433_L	0.516	0.99
404_F	449_L	0.514	0.99
68_W	114_Q	0.514	0.99
158_L	186_G	0.513	0.99
412_R	444_A	0.512	0.99
158_L	207_F	0.511	0.99
364_D	371_R	0.511	0.99
103_V	349_V	0.510	0.99
439_E	442_I	0.509	0.99
272_E	285_A	0.509	0.99
138_P	142_K	0.509	0.99
103_V	107_V	0.508	0.99
385_R	424_T	0.508	0.99
183_K	330_T	0.505	0.99
413_V	448_A	0.504	0.99
267_L	295_I	0.504	0.99
400_I	403_N	0.504	0.99
301_A	304_G	0.501	0.99
440_L	447_K	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4uoxA	3	0.9782	100	0.372	Contact Map
4atqA	7	0.9172	100	0.405	Contact Map
4a0gA	2	0.9673	100	0.405	Contact Map
2ykyA	4	0.9041	100	0.407	Contact Map
2epjA	2	0.8715	100	0.412	Contact Map
4e3qA	3	0.8998	100	0.413	Contact Map
1z7dA	2	0.8148	100	0.414	Contact Map
3oksA	2	0.9107	100	0.415	Contact Map
3hmuA	2	0.9129	100	0.418	Contact Map
4ffcA	4	0.9216	100	0.42	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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