YFCC - ECOLI - GREMLIN Contacts

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YFCC - Uncharacterized protein YfcC

UniProt:	P39263	Sequences: MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12607
Length:	506 (442)
Sequences:	2112 (1517)
Seq/√Len:	72.2

ECOLI - YFCC ABGT
BACSU - YCGA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
242_I	492_M	4.771	1.00
348_E	351_R	3.797	1.00
128_R	348_E	3.502	1.00
20_V	339_V	3.476	1.00
487_G	491_I	3.358	1.00
159_S	236_W	3.279	1.00
302_W	307_N	3.142	1.00
495_V	499_G	3.059	1.00
116_M	360_V	3.054	1.00
282_F	285_G	2.978	1.00
284_F	288_L	2.950	1.00
278_E	282_F	2.723	1.00
155_F	247_T	2.718	1.00
434_D	440_R	2.690	1.00
282_F	286_D	2.651	1.00
27_I	31_L	2.641	1.00
483_A	487_G	2.624	1.00
152_P	248_M	2.600	1.00
475_F	479_L	2.559	1.00
257_N	260_L	2.529	1.00
159_S	240_T	2.473	1.00
498_I	502_L	2.456	1.00
326_G	342_M	2.437	1.00
281_P	285_G	2.422	1.00
278_E	285_G	2.406	1.00
338_T	341_T	2.397	1.00
116_M	353_M	2.348	1.00
227_S	441_Q	2.322	1.00
324_V	328_I	2.258	1.00
245_I	249_V	2.180	1.00
278_E	284_F	2.168	1.00
396_D	399_V	2.162	1.00
243_G	489_L	2.161	1.00
412_N	454_S	2.128	1.00
42_D	66_R	2.094	1.00
128_R	341_T	2.093	1.00
28_L	32_A	2.061	1.00
24_F	28_L	2.048	1.00
235_V	496_V	2.037	1.00
93_M	320_T	2.026	1.00
296_V	321_M	2.021	1.00
285_G	289_V	2.020	1.00
433_G	443_T	2.020	1.00
410_V	414_F	2.000	1.00
281_P	286_D	1.961	1.00
191_T	255_K	1.961	1.00
162_G	170_E	1.946	1.00
289_V	329_G	1.942	1.00
153_A	240_T	1.920	1.00
290_L	294_T	1.917	1.00
124_G	349_G	1.893	1.00
398_A	498_I	1.869	1.00
249_V	253_R	1.859	1.00
302_W	306_V	1.832	1.00
259_L	264_H	1.824	1.00
408_Q	425_T	1.809	1.00
234_V	496_V	1.805	1.00
412_N	451_D	1.794	1.00
281_P	284_F	1.781	1.00
237_V	241_L	1.776	1.00
233_I	237_V	1.774	1.00
402_W	494_S	1.743	1.00
121_G	346_F	1.728	1.00
153_A	244_L	1.727	1.00
36_V	41_F	1.725	1.00
26_A	369_L	1.719	1.00
37_P	81_Q	1.714	1.00
246_F	488_L	1.713	1.00
279_Q	282_F	1.710	1.00
412_N	421_Q	1.709	1.00
92_L	369_L	1.708	1.00
404_M	429_L	1.691	1.00
285_G	336_G	1.687	1.00
194_L	481_V	1.659	1.00
38_V	70_N	1.655	1.00
43_S	382_N	1.653	1.00
32_A	36_V	1.651	1.00
291_I	295_A	1.646	1.00
401_A	442_V	1.644	1.00
43_S	386_N	1.641	1.00
151_I	185_L	1.639	0.99
241_L	245_I	1.626	0.99
41_F	386_N	1.608	0.99
402_W	498_I	1.585	0.99
32_A	35_V	1.580	0.99
29_T	370_V	1.579	0.99
305_I	308_A	1.576	0.99
213_C	418_G	1.575	0.99
402_W	406_L	1.569	0.99
409_A	454_S	1.563	0.99
34_W	38_V	1.560	0.99
13_W	16_P	1.560	0.99
229_S	233_I	1.554	0.99
221_A	441_Q	1.547	0.99
252_S	256_K	1.543	0.99
91_G	95_F	1.543	0.99
282_F	289_V	1.542	0.99
499_G	503_M	1.517	0.99
329_G	337_M	1.516	0.99
36_V	380_V	1.513	0.99
323_L	327_I	1.508	0.99
288_L	291_I	1.506	0.99
240_T	244_L	1.506	0.99
439_N	442_V	1.502	0.99
242_I	488_L	1.500	0.99
350_A	354_I	1.499	0.99
491_I	495_V	1.496	0.99
179_A	193_V	1.494	0.99
278_E	281_P	1.486	0.99
451_D	455_H	1.464	0.99
125_I	319_F	1.462	0.99
173_A	176_I	1.422	0.99
40_M	379_S	1.417	0.99
278_E	286_D	1.413	0.98
246_F	250_Y	1.394	0.98
405_L	494_S	1.369	0.98
30_S	92_L	1.368	0.98
285_G	288_L	1.365	0.98
408_Q	421_Q	1.364	0.98
99_G	365_G	1.362	0.98
17_D	343_A	1.362	0.98
421_Q	425_T	1.360	0.98
418_G	451_D	1.359	0.98
163_A	208_W	1.357	0.98
299_W	302_W	1.353	0.98
389_A	435_L	1.349	0.98
247_T	485_L	1.343	0.98
288_L	328_I	1.342	0.98
156_I	240_T	1.337	0.98
409_A	490_F	1.337	0.98
191_T	252_S	1.332	0.98
280_R	284_F	1.328	0.98
417_S	420_G	1.324	0.98
286_D	289_V	1.323	0.98
288_L	292_V	1.322	0.98
98_E	372_N	1.322	0.98
235_V	449_F	1.321	0.98
301_I	305_I	1.313	0.98
204_F	418_G	1.308	0.97
321_M	324_V	1.306	0.97
231_L	235_V	1.305	0.97
295_A	299_W	1.302	0.97
131_T	290_L	1.301	0.97
23_F	27_I	1.295	0.97
267_D	271_R	1.295	0.97
236_W	240_T	1.290	0.97
287_W	290_L	1.287	0.97
129_T	329_G	1.286	0.97
279_Q	284_F	1.283	0.97
134_N	286_D	1.277	0.97
190_I	481_V	1.271	0.97
202_I	243_G	1.264	0.97
235_V	493_S	1.238	0.96
298_V	302_W	1.236	0.96
34_W	81_Q	1.229	0.96
451_D	454_S	1.224	0.96
189_S	267_D	1.223	0.96
324_V	327_I	1.217	0.96
406_L	410_V	1.209	0.96
71_E	80_V	1.206	0.96
95_F	98_E	1.205	0.96
474_D	477_N	1.202	0.96
315_A	319_F	1.196	0.96
125_I	322_G	1.195	0.96
202_I	239_A	1.194	0.96
279_Q	285_G	1.192	0.96
161_G	208_W	1.187	0.96
138_A	142_H	1.180	0.95
292_V	324_V	1.177	0.95
19_L	362_F	1.175	0.95
406_L	490_F	1.174	0.95
188_D	191_T	1.154	0.95
265_E	477_N	1.150	0.95
36_V	39_G	1.150	0.95
292_V	296_V	1.138	0.94
222_G	430_A	1.137	0.94
162_G	171_A	1.129	0.94
182_M	195_V	1.128	0.94
287_W	291_I	1.127	0.94
278_E	289_V	1.120	0.94
129_T	336_G	1.117	0.94
350_A	358_L	1.116	0.94
17_D	355_A	1.113	0.94
282_F	290_L	1.112	0.94
128_R	345_S	1.110	0.94
33_T	373_G	1.109	0.94
284_F	289_V	1.108	0.94
282_F	308_A	1.106	0.93
295_A	298_V	1.104	0.93
221_A	434_D	1.103	0.93
277_V	282_F	1.102	0.93
156_I	195_V	1.094	0.93
401_A	497_V	1.092	0.93
282_F	287_W	1.089	0.93
218_Q	223_V	1.086	0.93
190_I	262_R	1.086	0.93
19_L	343_A	1.085	0.93
140_I	174_F	1.080	0.93
152_P	244_L	1.079	0.93
182_M	192_T	1.074	0.92
457_I	486_L	1.072	0.92
26_A	365_G	1.072	0.92
327_I	336_G	1.070	0.92
277_V	285_G	1.068	0.92
156_I	244_L	1.067	0.92
187_Y	248_M	1.067	0.92
101_T	108_T	1.062	0.92
405_L	490_F	1.062	0.92
248_M	252_S	1.061	0.92
19_L	355_A	1.058	0.92
415_V	424_L	1.058	0.92
204_F	451_D	1.056	0.92
155_F	178_I	1.055	0.92
412_N	450_G	1.051	0.92
100_L	114_M	1.051	0.92
336_G	345_S	1.050	0.92
282_F	305_I	1.037	0.91
163_A	236_W	1.036	0.91
215_V	225_V	1.035	0.91
143_T	450_G	1.033	0.91
286_D	290_L	1.031	0.91
223_V	441_Q	1.027	0.91
170_E	212_F	1.024	0.91
198_I	243_G	1.021	0.90
275_A	278_E	1.020	0.90
221_A	440_R	1.016	0.90
277_V	281_P	1.013	0.90
14_A	340_N	1.009	0.90
166_G	213_C	1.008	0.90
212_F	215_V	1.007	0.90
96_P	369_L	1.006	0.90
442_V	497_V	1.006	0.90
91_G	372_N	1.001	0.90
198_I	482_G	1.001	0.90
62_P	65_F	0.997	0.89
194_L	482_G	0.996	0.89
450_G	454_S	0.995	0.89
390_N	393_S	0.994	0.89
353_M	356_P	0.991	0.89
191_T	251_A	0.989	0.89
499_G	502_L	0.988	0.89
17_D	340_N	0.987	0.89
187_Y	255_K	0.983	0.89
221_A	430_A	0.976	0.88
124_G	345_S	0.976	0.88
194_L	247_T	0.974	0.88
304_V	308_A	0.967	0.88
463_S	470_V	0.967	0.88
30_S	34_W	0.964	0.88
24_F	27_I	0.962	0.88
187_Y	252_S	0.956	0.87
34_W	37_P	0.955	0.87
26_A	92_L	0.954	0.87
134_N	278_E	0.954	0.87
388_I	407_F	0.950	0.87
278_E	305_I	0.949	0.87
282_F	288_L	0.947	0.87
281_P	303_G	0.943	0.87
445_L	500_A	0.928	0.86
282_F	303_G	0.926	0.86
297_M	300_V	0.926	0.86
80_V	373_G	0.923	0.85
67_I	70_N	0.921	0.85
401_A	438_V	0.920	0.85
108_T	364_K	0.920	0.85
322_G	342_M	0.919	0.85
160_L	164_V	0.918	0.85
280_R	286_D	0.912	0.85
303_G	308_A	0.911	0.85
453_F	493_S	0.908	0.84
34_W	373_G	0.905	0.84
281_P	308_A	0.904	0.84
20_V	340_N	0.904	0.84
453_F	490_F	0.903	0.84
128_R	352_M	0.903	0.84
245_I	488_L	0.898	0.84
201_Q	456_I	0.897	0.84
279_Q	286_D	0.896	0.84
350_A	353_M	0.888	0.83
369_L	373_G	0.888	0.83
10_T	13_W	0.887	0.83
446_A	497_V	0.887	0.83
277_V	284_F	0.886	0.83
398_A	502_L	0.886	0.83
462_A	466_A	0.883	0.83
241_L	244_L	0.881	0.83
492_M	496_V	0.880	0.82
204_F	213_C	0.874	0.82
442_V	500_A	0.874	0.82
96_P	361_G	0.870	0.82
281_P	288_L	0.868	0.82
373_G	382_N	0.867	0.82
281_P	295_A	0.867	0.82
283_T	286_D	0.866	0.81
280_R	287_W	0.862	0.81
21_I	24_F	0.859	0.81
162_G	204_F	0.855	0.81
430_A	440_R	0.855	0.81
320_T	324_V	0.853	0.80
363_A	417_S	0.849	0.80
337_M	345_S	0.849	0.80
166_G	212_F	0.847	0.80
96_P	312_P	0.844	0.80
109_A	364_K	0.844	0.80
190_I	194_L	0.843	0.80
168_G	463_S	0.842	0.80
418_G	421_Q	0.841	0.80
302_W	308_A	0.839	0.79
188_D	254_V	0.839	0.79
264_H	267_D	0.838	0.79
202_I	489_L	0.836	0.79
338_T	342_M	0.836	0.79
208_W	233_I	0.834	0.79
179_A	470_V	0.832	0.79
289_V	292_V	0.832	0.79
230_G	234_V	0.828	0.78
178_I	182_M	0.827	0.78
223_V	227_S	0.823	0.78
171_A	175_A	0.822	0.78
344_S	351_R	0.822	0.78
289_V	321_M	0.820	0.78
152_P	187_Y	0.819	0.78
143_T	154_L	0.819	0.78
322_G	326_G	0.815	0.77
284_F	328_I	0.813	0.77
144_R	150_F	0.812	0.77
401_A	446_A	0.812	0.77
171_A	200_T	0.811	0.77
94_N	98_E	0.810	0.77
171_A	201_Q	0.808	0.77
389_A	432_L	0.805	0.77
244_L	248_M	0.805	0.77
292_V	328_I	0.804	0.76
168_G	204_F	0.804	0.76
100_L	357_A	0.803	0.76
206_S	239_A	0.802	0.76
189_S	263_V	0.801	0.76
193_V	471_C	0.798	0.76
289_V	305_I	0.795	0.76
292_V	320_T	0.795	0.76
138_A	283_T	0.787	0.75
267_D	270_F	0.787	0.75
221_A	227_S	0.785	0.75
117_L	120_G	0.782	0.74
156_I	159_S	0.782	0.74
193_V	473_V	0.780	0.74
285_G	303_G	0.778	0.74
30_S	81_Q	0.772	0.73
238_I	496_V	0.768	0.73
196_T	199_A	0.768	0.73
231_L	500_A	0.766	0.73
41_F	383_T	0.765	0.73
157_L	240_T	0.762	0.72
129_T	327_I	0.760	0.72
182_M	247_T	0.755	0.72
453_F	486_L	0.755	0.72
44_Q	62_P	0.753	0.72
212_F	232_R	0.752	0.71
294_T	298_V	0.751	0.71
284_F	295_A	0.748	0.71
455_H	471_C	0.745	0.71
35_V	151_I	0.745	0.71
421_Q	451_D	0.744	0.71
159_S	163_A	0.742	0.70
310_F	313_E	0.740	0.70
386_N	390_N	0.740	0.70
140_I	183_V	0.739	0.70
442_V	445_L	0.739	0.70
234_V	241_L	0.735	0.70
71_E	379_S	0.733	0.70
252_S	255_K	0.732	0.69
212_F	216_V	0.731	0.69
201_Q	461_S	0.731	0.69
239_A	489_L	0.731	0.69
411_F	415_V	0.730	0.69
409_A	412_N	0.730	0.69
414_F	458_Y	0.730	0.69
29_T	373_G	0.727	0.69
29_T	380_V	0.726	0.69
21_I	101_T	0.725	0.69
235_V	365_G	0.723	0.68
29_T	369_L	0.722	0.68
492_M	495_V	0.720	0.68
256_K	260_L	0.720	0.68
81_Q	91_G	0.718	0.68
351_R	354_I	0.717	0.68
405_L	497_V	0.715	0.68
125_I	129_T	0.715	0.68
303_G	307_N	0.713	0.67
238_I	492_M	0.712	0.67
218_Q	227_S	0.711	0.67
426_M	433_G	0.711	0.67
215_V	232_R	0.710	0.67
159_S	400_A	0.710	0.67
157_L	161_G	0.709	0.67
386_N	389_A	0.707	0.67
285_G	307_N	0.707	0.67
482_G	486_L	0.705	0.67
169_E	212_F	0.703	0.66
135_G	328_I	0.703	0.66
282_F	307_N	0.703	0.66
309_W	313_E	0.702	0.66
179_A	192_T	0.701	0.66
203_G	206_S	0.700	0.66
281_P	307_N	0.700	0.66
458_Y	463_S	0.699	0.66
385_L	432_L	0.698	0.66
195_V	243_G	0.697	0.66
416_T	461_S	0.695	0.65
284_F	305_I	0.694	0.65
373_G	380_V	0.693	0.65
31_L	35_V	0.691	0.65
385_L	424_L	0.691	0.65
36_V	383_T	0.690	0.65
348_E	352_M	0.690	0.65
285_G	295_A	0.687	0.65
115_F	170_E	0.686	0.64
117_L	121_G	0.685	0.64
213_C	217_A	0.685	0.64
284_F	287_W	0.684	0.64
215_V	226_L	0.682	0.64
162_G	200_T	0.677	0.63
251_A	254_V	0.677	0.63
342_M	345_S	0.677	0.63
285_G	305_I	0.675	0.63
285_G	328_I	0.675	0.63
17_D	20_V	0.673	0.63
164_V	209_M	0.671	0.63
413_F	458_Y	0.669	0.62
451_D	458_Y	0.669	0.62
45_E	63_H	0.667	0.62
155_F	243_G	0.666	0.62
411_F	425_T	0.665	0.62
100_L	113_I	0.664	0.62
189_S	192_T	0.664	0.62
392_I	436_V	0.664	0.62
40_M	43_S	0.661	0.62
70_N	80_V	0.661	0.62
395_L	399_V	0.660	0.61
217_A	426_M	0.660	0.61
162_G	212_F	0.658	0.61
30_S	80_V	0.656	0.61
354_I	359_L	0.656	0.61
176_I	195_V	0.656	0.61
208_W	236_W	0.654	0.61
281_P	292_V	0.653	0.61
111_G	417_S	0.653	0.61
35_V	499_G	0.653	0.61
18_T	175_A	0.652	0.61
195_V	247_T	0.651	0.60
429_L	443_T	0.650	0.60
278_E	308_A	0.650	0.60
292_V	295_A	0.648	0.60
449_F	496_V	0.647	0.60
285_G	308_A	0.647	0.60
26_A	29_T	0.644	0.60
487_G	490_F	0.641	0.59
397_N	438_V	0.641	0.59
116_M	177_I	0.641	0.59
275_A	281_P	0.638	0.59
292_V	303_G	0.638	0.59
27_I	92_L	0.637	0.59
188_D	261_S	0.637	0.59
346_F	350_A	0.635	0.58
291_I	298_V	0.635	0.58
118_V	212_F	0.634	0.58
419_S	427_P	0.634	0.58
285_G	291_I	0.633	0.58
370_V	380_V	0.633	0.58
344_S	348_E	0.633	0.58
116_M	356_P	0.632	0.58
10_T	14_A	0.630	0.58
156_I	236_W	0.630	0.58
311_I	484_T	0.629	0.58
284_F	291_I	0.629	0.58
279_Q	288_L	0.628	0.58
160_L	163_A	0.628	0.58
170_E	200_T	0.628	0.58
388_I	392_I	0.625	0.57
426_M	444_V	0.625	0.57
174_F	196_T	0.623	0.57
483_A	486_L	0.622	0.57
197_Y	456_I	0.620	0.57
125_I	298_V	0.619	0.57
413_F	454_S	0.619	0.57
100_L	361_G	0.618	0.56
327_I	338_T	0.617	0.56
286_D	307_N	0.616	0.56
385_L	388_I	0.615	0.56
165_F	171_A	0.615	0.56
457_I	483_A	0.614	0.56
232_R	445_L	0.614	0.56
101_T	110_V	0.612	0.56
94_N	251_A	0.612	0.56
125_I	177_I	0.611	0.56
297_M	301_I	0.610	0.55
363_A	420_G	0.608	0.55
399_V	438_V	0.607	0.55
163_A	211_P	0.607	0.55
357_A	361_G	0.606	0.55
15_M	476_R	0.606	0.55
461_S	465_M	0.603	0.55
19_L	418_G	0.603	0.55
253_R	260_L	0.602	0.55
155_F	244_L	0.602	0.55
403_F	406_L	0.602	0.55
32_A	384_I	0.602	0.55
30_S	64_S	0.602	0.55
151_I	449_F	0.601	0.54
11_R	14_A	0.600	0.54
443_T	446_A	0.599	0.54
91_G	94_N	0.597	0.54
20_V	24_F	0.597	0.54
380_V	383_T	0.596	0.54
18_T	463_S	0.595	0.54
180_P	183_V	0.595	0.54
31_L	406_L	0.593	0.53
283_T	287_W	0.593	0.53
418_G	447_F	0.593	0.53
135_G	157_L	0.592	0.53
391_A	394_G	0.592	0.53
249_V	252_S	0.591	0.53
170_E	207_S	0.591	0.53
433_G	436_V	0.590	0.53
284_F	307_N	0.590	0.53
188_D	250_Y	0.589	0.53
213_C	451_D	0.589	0.53
315_A	497_V	0.585	0.52
214_V	217_A	0.584	0.52
204_F	455_H	0.583	0.52
98_E	101_T	0.583	0.52
281_P	287_W	0.582	0.52
285_G	329_G	0.581	0.52
384_I	414_F	0.579	0.52
399_V	498_I	0.579	0.52
151_I	251_A	0.578	0.52
219_G	424_L	0.575	0.51
282_F	291_I	0.575	0.51
118_V	346_F	0.575	0.51
430_A	434_D	0.575	0.51
116_M	121_G	0.575	0.51
396_D	438_V	0.575	0.51
135_G	290_L	0.574	0.51
219_G	314_I	0.574	0.51
341_T	345_S	0.573	0.51
17_D	344_S	0.572	0.51
23_F	95_F	0.570	0.51
464_L	468_L	0.570	0.51
204_F	314_I	0.570	0.51
323_L	342_M	0.569	0.50
488_L	491_I	0.568	0.50
139_L	384_I	0.567	0.50
202_I	456_I	0.567	0.50
212_F	217_A	0.566	0.50
92_L	314_I	0.566	0.50
387_S	435_L	0.566	0.50
250_Y	261_S	0.565	0.50
152_P	197_Y	0.564	0.50
205_A	418_G	0.564	0.50
127_M	133_D	0.562	0.50
40_M	66_R	0.560	0.49
387_S	391_A	0.558	0.49
263_V	266_S	0.557	0.49
239_A	243_G	0.555	0.49
291_I	406_L	0.555	0.49
126_V	325_I	0.555	0.49
292_V	305_I	0.554	0.49
389_A	436_V	0.553	0.48
266_S	474_D	0.553	0.48
101_T	113_I	0.553	0.48
181_L	185_L	0.553	0.48
326_G	337_M	0.552	0.48
135_G	174_F	0.552	0.48
139_L	157_L	0.551	0.48
35_V	298_V	0.551	0.48
222_G	225_V	0.551	0.48
166_G	210_N	0.549	0.48
132_I	492_M	0.549	0.48
117_L	354_I	0.549	0.48
146_N	150_F	0.549	0.48
130_G	134_N	0.548	0.48
21_I	343_A	0.548	0.48
191_T	254_V	0.548	0.48
124_G	312_P	0.547	0.48
210_N	226_L	0.547	0.48
161_G	170_E	0.547	0.48
191_T	263_V	0.547	0.48
132_I	177_I	0.546	0.48
191_T	247_T	0.546	0.48
175_A	356_P	0.545	0.47
163_A	207_S	0.545	0.47
380_V	384_I	0.544	0.47
39_G	383_T	0.544	0.47
329_G	336_G	0.544	0.47
63_H	386_N	0.543	0.47
457_I	492_M	0.543	0.47
293_L	297_M	0.543	0.47
346_F	358_L	0.541	0.47
190_I	471_C	0.541	0.47
31_L	487_G	0.540	0.47
282_F	292_V	0.540	0.47
234_V	499_G	0.538	0.47
351_R	496_V	0.536	0.46
473_V	477_N	0.536	0.46
120_G	346_F	0.534	0.46
198_I	247_T	0.534	0.46
297_M	307_N	0.533	0.46
192_T	466_A	0.533	0.46
440_R	477_N	0.533	0.46
404_M	443_T	0.532	0.46
33_T	225_V	0.532	0.46
295_A	308_A	0.531	0.46
282_F	302_W	0.530	0.46
120_G	358_L	0.529	0.46
356_P	420_G	0.529	0.46
278_E	288_L	0.529	0.46
340_N	344_S	0.527	0.45
68_L	307_N	0.526	0.45
187_Y	448_Q	0.526	0.45
400_A	433_G	0.525	0.45
38_V	382_N	0.525	0.45
268_R	272_E	0.525	0.45
388_I	432_L	0.524	0.45
464_L	475_F	0.523	0.45
163_A	400_A	0.522	0.45
258_P	261_S	0.522	0.45
265_E	495_V	0.520	0.44
227_S	353_M	0.519	0.44
70_N	373_G	0.519	0.44
45_E	62_P	0.518	0.44
234_V	503_M	0.518	0.44
449_F	497_V	0.517	0.44
180_P	385_L	0.517	0.44
387_S	390_N	0.515	0.44
38_V	44_Q	0.515	0.44
286_D	291_I	0.514	0.44
463_S	466_A	0.514	0.44
191_T	250_Y	0.514	0.44
251_A	481_V	0.510	0.43
301_I	304_V	0.510	0.43
63_H	66_R	0.510	0.43
97_F	312_P	0.510	0.43
359_L	465_M	0.510	0.43
162_G	424_L	0.510	0.43
172_V	197_Y	0.509	0.43
181_L	411_F	0.509	0.43
338_T	344_S	0.509	0.43
239_A	493_S	0.508	0.43
447_F	451_D	0.507	0.43
296_V	406_L	0.506	0.43
461_S	464_L	0.506	0.43
161_G	301_I	0.506	0.43
152_P	165_F	0.505	0.43
36_V	387_S	0.505	0.43
196_T	464_L	0.505	0.43
286_D	292_V	0.504	0.43
156_I	247_T	0.504	0.43
128_R	337_M	0.503	0.42
388_I	411_F	0.503	0.42
437_G	487_G	0.502	0.42
418_G	461_S	0.502	0.42
239_A	242_I	0.501	0.42
405_L	493_S	0.500	0.42

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r0cA	3	0.8636	100	0.491	Contact Map
4r1iA	2	0.8972	100	0.508	Contact Map
4f35D	2	0.834	100	0.791	Contact Map
3giaA	1	0.415	78.4	0.966	Contact Map
1pw4A	1	0.4012	54.7	0.971	Contact Map
4xnjA	1	0.7589	54.1	0.971	Contact Map
3qnqA	2	0.4783	53.7	0.971	Contact Map
4j05A	3	0.3953	43.7	0.973	Contact Map
3d31C	2	0.3992	42.5	0.973	Contact Map
4djkA	2	0.4269	41.6	0.973	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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