GREMLIN Database
EPTB - Phosphoethanolamine transferase EptB
UniProt: P37661 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG12267
Length: 563 (501)
Sequences: 5455 (4658)
Seq/√Len: 208.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
275_K446_S6.4441.00
326_K355_R4.8081.00
534_G548_N4.7631.00
383_G455_K4.2101.00
275_K278_Q4.1841.00
379_Q451_Q3.9221.00
271_N277_A3.5851.00
331_S388_G3.5121.00
446_S450_D3.4391.00
531_T550_N3.4351.00
523_R549_N3.1851.00
253_I461_Y3.1661.00
250_V325_L3.0491.00
450_D453_R3.0301.00
249_Y457_A3.0241.00
138_I142_R3.0011.00
251_V459_V2.9761.00
255_G258_T2.8971.00
250_V536_L2.8751.00
264_G273_T2.8691.00
281_N453_R2.8221.00
248_T456_K2.7671.00
325_L536_L2.5571.00
218_W221_V2.4131.00
452_V459_V2.4091.00
449_I459_V2.3631.00
139_W143_C2.3201.00
249_Y390_H2.3001.00
266_F284_A2.2771.00
251_V457_A2.2441.00
303_V320_N2.2371.00
273_T277_A2.2271.00
372_M447_S2.2201.00
377_E380_Q2.2081.00
447_S450_D2.1991.00
450_D454_D2.1361.00
252_F391_L2.1031.00
408_P440_Y2.0611.00
25_N29_F2.0571.00
246_D456_K2.0391.00
359_G362_P2.0131.00
458_I494_V2.0031.00
378_M394_L1.9951.00
345_S349_A1.9911.00
253_I445_I1.9771.00
301_M462_A1.9501.00
252_F460_F1.9171.00
412_A415_K1.9091.00
335_Y381_S1.8981.00
399_S437_S1.8911.00
211_S215_L1.8421.00
274_P442_D1.8221.00
156_Q160_S1.8161.00
294_T395_H1.7961.00
128_I132_A1.7921.00
208_N211_S1.7901.00
379_Q455_K1.7841.00
372_M440_Y1.7801.00
379_Q383_G1.7671.00
25_N28_V1.7631.00
45_G49_V1.7451.00
375_V379_Q1.7311.00
193_L196_Y1.7241.00
400_H464_D1.7221.00
157_R160_S1.6981.00
226_D229_S1.6931.00
258_T438_V1.6801.00
413_Q439_T1.6801.00
460_F494_V1.6771.00
462_A525_H1.6751.00
88_A98_V1.6721.00
264_G271_N1.6621.00
234_A237_F1.6611.00
439_T443_H1.6601.00
443_H447_S1.6471.00
346_N350_D1.6471.00
204_Y208_N1.6241.00
226_D231_L1.6151.00
194_P198_G1.5911.00
255_G461_Y1.5891.00
258_T441_V1.5881.00
448_V459_V1.5741.00
451_Q454_D1.5731.00
254_I298_L1.5731.00
492_M528_L1.5731.00
264_G277_A1.5571.00
140_N144_R1.5561.00
414_W417_E1.5551.00
286_R506_N1.5501.00
171_V175_I1.5501.00
255_G441_V1.5451.00
340_E346_N1.5401.00
374_L394_L1.5371.00
262_H435_D1.5131.00
218_W222_D1.5061.00
282_L495_W1.5021.00
463_A490_V1.5011.00
375_V396_T1.4971.00
248_T458_I1.4861.00
443_H446_S1.4841.00
218_W223_E1.4821.00
333_D390_H1.4771.00
208_N212_A1.4751.00
278_Q281_N1.4681.00
451_Q455_K1.4621.00
333_D392_I1.4611.00
254_I462_A1.4601.00
158_I161_L1.4541.00
174_P178_L1.4511.00
204_Y209_W1.4381.00
233_P236_K1.4341.00
335_Y392_I1.4241.00
173_A177_L1.4221.00
411_F443_H1.4201.00
321_I532_I1.4191.00
250_V458_I1.4141.00
209_W212_A1.4131.00
192_D195_S1.3911.00
232_N235_K1.3901.00
156_Q159_R1.3821.00
276_L445_I1.3771.00
344_Y347_T1.3731.00
485_P489_R1.3671.00
375_V448_V1.3671.00
304_R530_D1.3651.00
324_V533_M1.3581.00
273_T276_L1.3501.00
200_V203_S1.3481.00
447_S451_Q1.3411.00
412_A417_E1.3401.00
172_W176_R1.3401.00
496_M500_Y1.3361.00
449_I453_R1.3321.00
227_N230_L1.3321.00
192_D196_Y1.3221.00
46_I49_V1.3161.00
414_W418_C1.3121.00
409_R412_A1.3101.00
341_M346_N1.3061.00
444_F448_V1.3001.00
336_A345_S1.3001.00
224_S227_N1.2961.00
230_L233_P1.2911.00
222_D225_S1.2911.00
168_G172_W1.2861.00
115_S118_V1.2831.00
47_S51_E1.2831.00
227_N231_L1.2821.00
270_R435_D1.2791.00
502_E506_N1.2781.00
260_W266_F1.2761.00
252_F301_M1.2761.00
334_L349_A1.2761.00
399_S438_V1.2741.00
255_G445_I1.2671.00
503_N506_N1.2611.00
250_V391_L1.2601.00
444_F447_S1.2511.00
262_H438_V1.2481.00
403_Y467_E1.2471.00
334_L395_H1.2341.00
183_K186_E1.2281.00
21_G24_M1.2261.00
285_F492_M1.2251.00
177_L181_Q1.2231.00
287_G522_P1.2121.00
230_L234_A1.2121.00
220_R223_E1.2081.00
399_S441_V1.2081.00
278_Q446_S1.2061.00
533_M538_Y1.2021.00
275_K442_D1.1961.00
219_A223_E1.1951.00
268_Y435_D1.1951.00
502_E505_A1.1931.00
195_S204_Y1.1921.00
205_L208_N1.1891.00
112_I116_K1.1841.00
378_M382_L1.1811.00
208_N213_L1.1731.00
226_D230_L1.1701.00
383_G451_Q1.1691.00
227_N234_A1.1681.00
62_L66_L1.1671.00
294_T400_H1.1631.00
258_T262_H1.1631.00
193_L200_V1.1621.00
342_W345_S1.1531.00
258_T263_M1.1511.00
48_A51_E1.1491.00
234_A238_T1.1481.00
51_E55_T1.1471.00
302_F391_L1.1441.00
192_D198_G1.1421.00
408_P411_F1.1411.00
22_L25_N1.1341.00
301_M528_L1.1311.00
290_C300_C1.1291.00
250_V460_F1.1271.00
49_V52_L1.1261.00
344_Y349_A1.1251.00
275_K449_I1.1251.00
260_W489_R1.1251.00
165_V169_I1.1251.00
496_M499_K1.1181.00
412_A416_P1.1181.00
212_A215_L1.1171.00
196_Y199_V1.1161.00
458_I496_M1.1161.00
229_S237_F1.1151.00
206_P212_A1.1061.00
48_A52_L1.1031.00
340_E344_Y1.0991.00
328_L538_Y1.0961.00
340_E359_G1.0951.00
333_D381_S1.0951.00
287_G489_R1.0941.00
231_L235_K1.0921.00
203_S207_S1.0911.00
275_K443_H1.0901.00
272_T277_A1.0891.00
177_L180_I1.0881.00
254_I393_I1.0871.00
223_E226_D1.0841.00
251_V390_H1.0791.00
139_W142_R1.0761.00
136_I140_N1.0751.00
258_T273_T1.0741.00
407_Y436_N1.0701.00
460_F532_I1.0681.00
254_I301_M1.0661.00
500_Y503_N1.0651.00
224_S231_L1.0601.00
256_E464_D1.0591.00
382_L452_V1.0571.00
252_F393_I1.0571.00
203_S212_A1.0561.00
458_I532_I1.0561.00
247_D328_L1.0551.00
58_V62_L1.0531.00
376_D447_S1.0471.00
25_N30_Y1.0451.00
195_S199_V1.0431.00
55_T62_L1.0411.00
427_K432_N1.0401.00
259_R466_G1.0331.00
394_L448_V1.0321.00
368_P397_K1.0321.00
209_W214_G1.0301.00
377_E381_S1.0291.00
114_L117_E1.0231.00
331_S356_E1.0211.00
203_S206_P1.0121.00
203_S208_N1.0121.00
114_L118_V1.0111.00
275_K450_D1.0081.00
233_P237_F1.0051.00
346_N349_A1.0041.00
191_V194_P1.0021.00
283_A550_N1.0001.00
208_N215_L0.9981.00
167_A171_V0.9981.00
204_Y213_L0.9951.00
219_A222_D0.9951.00
51_E54_A0.9931.00
201_A204_Y0.9881.00
220_R224_S0.9781.00
256_E400_H0.9771.00
67_S70_G0.9771.00
23_F30_Y0.9731.00
228_N232_N0.9721.00
212_A216_Y0.9721.00
195_S198_G0.9701.00
21_G25_N0.9691.00
462_A528_L0.9611.00
175_I179_D0.9591.00
382_L392_I0.9581.00
396_T441_V0.9530.99
169_I173_A0.9510.99
53_A57_L0.9450.99
371_D375_V0.9400.99
228_N234_A0.9390.99
50_V55_T0.9390.99
449_I461_Y0.9370.99
258_T276_L0.9370.99
42_V47_S0.9360.99
255_G375_V0.9360.99
279_E282_L0.9360.99
376_D451_Q0.9350.99
325_L391_L0.9350.99
79_S83_L0.9350.99
173_A176_R0.9270.99
202_N207_S0.9210.99
17_A25_N0.9210.99
330_F389_K0.9200.99
329_G389_K0.9170.99
274_P277_A0.9150.99
250_V330_F0.9140.99
207_S212_A0.9120.99
398_G440_Y0.9110.99
202_N205_L0.9100.99
413_Q416_P0.9100.99
26_G30_Y0.9100.99
319_Q327_Q0.9090.99
342_W349_A0.9080.99
477_G480_R0.9060.99
231_L234_A0.9050.99
325_L533_M0.9050.99
164_V167_A0.9010.99
294_T464_D0.9010.99
174_P177_L0.8990.99
31_R34_G0.8990.99
194_P197_G0.8980.99
60_F66_L0.8980.99
530_D546_N0.8970.99
193_L198_G0.8970.99
174_P180_I0.8970.99
210_L214_G0.8970.99
349_A354_Y0.8950.99
333_D356_E0.8940.99
304_R318_E0.8930.99
175_I181_Q0.8910.99
373_L376_D0.8870.99
252_F528_L0.8870.99
19_Y25_N0.8850.99
23_F26_G0.8820.99
179_D182_Q0.8820.99
219_A226_D0.8790.99
180_I183_K0.8770.99
254_I395_H0.8760.99
204_Y207_S0.8750.99
248_T389_K0.8740.99
194_P204_Y0.8720.99
272_T435_D0.8720.99
335_Y374_L0.8710.99
282_L493_M0.8710.99
228_N231_L0.8700.99
28_V32_R0.8680.99
252_F462_A0.8670.99
375_V441_V0.8620.99
21_G29_F0.8620.99
207_S210_L0.8600.99
298_L345_S0.8580.99
29_F32_R0.8570.99
426_T429_Q0.8570.99
219_A224_S0.8550.99
404_T433_S0.8550.99
294_T298_L0.8540.99
378_M392_I0.8510.99
172_W182_Q0.8500.99
53_A63_L0.8500.99
229_S234_A0.8460.99
58_V61_F0.8410.99
46_I50_V0.8410.99
272_T276_L0.8400.99
276_L438_V0.8390.99
61_F64_R0.8370.99
181_Q184_K0.8370.99
222_D226_D0.8360.99
354_Y393_I0.8330.99
270_R274_P0.8310.99
158_I162_A0.8300.99
372_M443_H0.8280.99
209_W215_L0.8270.99
210_L213_L0.8260.99
204_Y212_A0.8240.99
322_F354_Y0.8240.99
475_L478_T0.8230.99
175_I178_L0.8220.98
253_I375_V0.8190.98
134_P138_I0.8190.98
54_A62_L0.8170.98
148_L151_L0.8090.98
303_V348_M0.8080.98
529_Y533_M0.8050.98
44_K47_S0.8040.98
157_R161_L0.8010.98
60_F63_L0.8000.98
398_G437_S0.7990.98
347_T350_D0.7980.98
61_F65_L0.7960.98
176_R180_I0.7960.98
370_D373_L0.7930.98
220_R225_S0.7920.98
251_V382_L0.7920.98
194_P200_V0.7900.98
462_A490_V0.7890.98
49_V59_T0.7890.98
141_N144_R0.7880.98
326_K332_S0.7870.98
160_S164_V0.7870.98
249_Y458_I0.7840.98
224_S228_N0.7830.98
223_E227_N0.7810.98
339_S342_W0.7790.98
400_H465_H0.7760.98
49_V53_A0.7730.98
331_S355_R0.7730.98
467_E470_N0.7720.98
330_F536_L0.7710.98
288_Y489_R0.7670.98
51_E56_V0.7650.98
172_W180_I0.7620.98
461_Y493_M0.7610.98
445_I461_Y0.7610.98
54_A58_V0.7590.97
467_E487_Q0.7580.97
29_F33_F0.7570.97
479_P484_P0.7570.97
250_V532_I0.7570.97
268_Y272_T0.7560.97
169_I172_W0.7560.97
33_F36_Y0.7550.97
163_V167_A0.7550.97
325_L328_L0.7530.97
252_F321_I0.7510.97
396_T444_F0.7510.97
175_I180_I0.7510.97
271_N439_T0.7490.97
241_A550_N0.7490.97
338_Q397_K0.7480.97
218_W226_D0.7470.97
25_N34_G0.7460.97
17_A21_G0.7460.97
363_R377_E0.7450.97
159_R162_A0.7440.97
19_Y23_F0.7440.97
176_R183_K0.7430.97
24_M28_V0.7420.97
42_V45_G0.7410.97
335_Y358_I0.7400.97
51_E60_F0.7390.97
125_L129_A0.7390.97
258_T399_S0.7380.97
43_W50_V0.7370.97
43_W47_S0.7370.97
159_R170_M0.7350.97
59_T65_L0.7350.97
141_N145_Y0.7340.97
43_W46_I0.7330.97
45_G55_T0.7320.97
31_R35_S0.7310.97
432_N436_N0.7310.97
208_N216_Y0.7290.97
441_V444_F0.7280.97
225_S233_P0.7280.97
130_V134_P0.7260.97
52_L56_V0.7260.97
321_I529_Y0.7250.97
164_V168_G0.7230.97
415_K418_C0.7230.97
229_S232_N0.7230.97
50_V54_A0.7230.97
25_N33_F0.7220.97
344_Y351_N0.7210.97
25_N31_R0.7190.97
501_L504_P0.7130.96
46_I52_L0.7130.96
445_I459_V0.7100.96
171_V174_P0.7100.96
176_R181_Q0.7100.96
476_H479_P0.7100.96
230_L237_F0.7090.96
253_I459_V0.7090.96
324_V327_Q0.7080.96
56_V63_L0.7050.96
52_L60_F0.7050.96
26_G29_F0.7050.96
263_M273_T0.7040.96
202_N206_P0.7040.96
414_W432_N0.7040.96
322_F332_S0.7020.96
211_S214_G0.7010.96
138_I141_N0.7000.96
132_A136_I0.6990.96
361_E364_N0.6980.96
440_Y443_H0.6970.96
43_W51_E0.6970.96
251_V448_V0.6960.96
434_Y438_V0.6950.96
51_E63_L0.6940.96
83_L131_S0.6910.96
112_I119_V0.6900.96
155_G159_R0.6900.96
276_L493_M0.6900.96
88_A99_I0.6860.95
380_Q451_Q0.6850.95
144_R147_L0.6850.95
20_I25_N0.6840.95
295_K343_F0.6840.95
376_D379_Q0.6820.95
131_S135_L0.6810.95
380_Q383_G0.6790.95
337_M397_K0.6790.95
91_Y100_G0.6770.95
247_D389_K0.6750.95
83_L87_G0.6750.95
337_M374_L0.6750.95
258_T461_Y0.6750.95
206_P209_W0.6720.95
273_T442_D0.6720.95
126_W130_V0.6710.95
191_V195_S0.6690.95
349_A352_I0.6690.95
358_I381_S0.6680.95
48_A53_A0.6680.95
30_Y35_S0.6670.95
167_A170_M0.6670.95
546_N549_N0.6630.95
373_L377_E0.6610.94
261_D486_E0.6600.94
441_V445_I0.6600.94
436_N439_T0.6590.94
50_V61_F0.6590.94
172_W181_Q0.6570.94
224_S230_L0.6560.94
113_D117_E0.6560.94
282_L286_R0.6540.94
468_S487_Q0.6540.94
160_S175_I0.6530.94
64_R67_S0.6510.94
414_W439_T0.6510.94
59_T64_R0.6500.94
204_Y214_G0.6490.94
461_Y495_W0.6490.94
285_F288_Y0.6490.94
47_S50_V0.6480.94
500_Y504_P0.6480.94
30_Y33_F0.6480.94
176_R179_D0.6470.94
201_A212_A0.6460.94
162_A166_L0.6460.94
302_F393_I0.6440.94
235_K238_T0.6440.94
476_H480_R0.6420.94
31_R37_A0.6360.93
232_N236_K0.6360.93
338_Q395_H0.6360.93
195_S200_V0.6360.93
103_I106_S0.6350.93
248_T330_F0.6340.93
229_S233_P0.6340.93
140_N143_C0.6320.93
485_P488_F0.6310.93
308_A311_N0.6310.93
79_S82_V0.6310.93
337_M369_V0.6290.93
257_T465_H0.6260.93
213_L216_Y0.6250.93
18_I22_L0.6250.93
492_M549_N0.6240.93
112_I118_V0.6220.92
239_Y242_P0.6220.92
143_C146_T0.6210.92
167_A172_W0.6190.92
174_P179_D0.6190.92
337_M367_K0.6170.92
271_N274_P0.6160.92
343_F346_N0.6160.92
217_A221_V0.6150.92
458_I500_Y0.6150.92
378_M448_V0.6150.92
209_W216_Y0.6140.92
63_L66_L0.6140.92
232_N237_F0.6140.92
336_A395_H0.6140.92
14_F18_I0.6130.92
173_A181_Q0.6130.92
300_C525_H0.6110.92
206_P210_L0.6110.92
345_S348_M0.6110.92
46_I51_E0.6100.92
49_V54_A0.6100.92
16_L20_I0.6070.92
330_F458_I0.6050.91
332_S355_R0.6050.91
298_L336_A0.6050.91
148_L152_R0.6040.91
414_W436_N0.6030.91
87_G99_I0.6030.91
158_I169_I0.6020.91
475_L479_P0.6010.91
322_F391_L0.6000.91
209_W213_L0.5990.91
375_V444_F0.5980.91
48_A61_F0.5960.91
411_F440_Y0.5960.91
178_L181_Q0.5940.91
178_L182_Q0.5930.91
294_T465_H0.5930.91
112_I115_S0.5930.91
157_R164_V0.5930.91
56_V59_T0.5910.90
206_P216_Y0.5910.90
219_A231_L0.5910.90
55_T60_F0.5910.90
55_T59_T0.5900.90
249_Y455_K0.5890.90
247_D458_I0.5890.90
226_D234_A0.5880.90
116_K119_V0.5870.90
131_S134_P0.5860.90
172_W175_I0.5850.90
161_L165_V0.5840.90
167_A177_L0.5830.90
345_S395_H0.5830.90
200_V204_Y0.5830.90
256_E396_T0.5820.90
260_W284_A0.5810.90
297_S462_A0.5790.90
222_D227_N0.5790.90
22_L27_A0.5780.89
192_D199_V0.5760.89
51_E62_L0.5760.89
126_W134_P0.5750.89
176_R182_Q0.5750.89
161_L180_I0.5750.89
124_I128_I0.5750.89
160_S176_R0.5750.89
331_S532_I0.5720.89
356_E359_G0.5720.89
356_E360_A0.5710.89
264_G272_T0.5710.89
263_M266_F0.5710.89
478_T484_P0.5700.89
168_G176_R0.5700.89
57_L69_F0.5690.89
348_M351_N0.5690.89
58_V64_R0.5680.89
323_A327_Q0.5680.89
160_S177_L0.5680.89
45_G48_A0.5680.89
257_T463_A0.5680.89
484_P487_Q0.5670.89
344_Y348_M0.5650.88
63_L67_S0.5650.88
45_G52_L0.5650.88
219_A230_L0.5650.88
230_L238_T0.5650.88
228_N236_K0.5650.88
491_P494_V0.5640.88
226_D237_F0.5640.88
38_H41_T0.5640.88
160_S172_W0.5640.88
173_A180_I0.5620.88
61_F66_L0.5620.88
490_V525_H0.5610.88
226_D235_K0.5610.88
299_R305_Q0.5600.88
492_M523_R0.5600.88
201_A205_L0.5600.88
273_T438_V0.5600.88
217_A225_S0.5600.88
18_I25_N0.5590.88
52_L66_L0.5590.88
205_L212_A0.5580.88
307_G310_D0.5580.88
257_T464_D0.5570.88
43_W53_A0.5550.87
166_L173_A0.5550.87
175_I182_Q0.5540.87
338_Q342_W0.5540.87
407_Y437_S0.5510.87
202_N208_N0.5500.87
249_Y389_K0.5500.87
346_N351_N0.5500.87
282_L285_F0.5490.87
256_E399_S0.5480.87
255_G399_S0.5470.87
93_T127_L0.5470.87
30_Y34_G0.5470.87
466_G469_I0.5460.87
51_E61_F0.5450.87
42_V50_V0.5440.86
37_A41_T0.5440.86
225_S228_N0.5440.86
133_L168_G0.5430.86
540_S543_G0.5410.86
191_V196_Y0.5390.86
332_S391_L0.5380.86
347_T351_N0.5380.86
128_I131_S0.5380.86
342_W346_N0.5370.86
199_V212_A0.5360.86
530_D544_G0.5360.86
545_I548_N0.5360.86
42_V60_F0.5350.86
345_S357_Q0.5350.86
91_Y296_L0.5340.85
309_E312_P0.5330.85
50_V53_A0.5330.85
396_T399_S0.5320.85
336_A342_W0.5310.85
429_Q433_S0.5310.85
297_S525_H0.5310.85
199_V204_Y0.5300.85
211_S216_Y0.5300.85
53_A61_F0.5290.85
66_L70_G0.5290.85
91_Y95_L0.5290.85
365_R397_K0.5280.85
193_L199_V0.5270.85
343_F349_A0.5270.85
194_P199_V0.5260.85
172_W177_L0.5260.85
304_R529_Y0.5260.85
486_E489_R0.5260.85
206_P211_S0.5260.85
23_F27_A0.5250.84
248_T457_A0.5250.84
336_A397_K0.5250.84
407_Y411_F0.5250.84
219_A229_S0.5240.84
191_V199_V0.5240.84
68_L71_R0.5230.84
279_E284_A0.5230.84
338_Q398_G0.5230.84
220_R229_S0.5230.84
164_V175_I0.5220.84
45_G51_E0.5190.84
221_V228_N0.5190.84
275_K447_S0.5170.84
391_L532_I0.5170.84
283_A496_M0.5170.84
44_K51_E0.5170.84
109_T114_L0.5170.84
472_R476_H0.5150.83
336_A343_F0.5140.83
53_A62_L0.5140.83
16_L23_F0.5130.83
92_M99_I0.5130.83
446_S449_I0.5120.83
526_V530_D0.5120.83
163_V171_V0.5120.83
47_S65_L0.5100.83
494_V531_T0.5100.83
168_G175_I0.5100.83
19_Y31_R0.5100.83
18_I23_F0.5070.82
217_A222_D0.5050.82
259_R297_S0.5040.82
199_V202_N0.5040.82
114_L119_V0.5040.82
261_D277_A0.5040.82
225_S231_L0.5030.82
59_T66_L0.5030.82
17_A20_I0.5020.82
57_L60_F0.5020.82
51_E57_L0.5020.82
331_S386_P0.5000.82
206_P214_G0.5000.82
480_R483_A0.5000.82
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4kavA 1 0.5719 100 0.547 Contact Map
2w5qA 1 0.5595 100 0.547 Contact Map
4uorA 3 0.556 100 0.549 Contact Map
2w8dA 1 0.5613 100 0.55 Contact Map
3lxqA 1 0.5613 100 0.552 Contact Map
4uopA 2 0.5666 100 0.553 Contact Map
4tn0A 1 0.5329 100 0.555 Contact Map
4upkA 3 0.5293 100 0.563 Contact Map
2vqrA 3 0.5293 100 0.564 Contact Map
4uphA 2 0.5275 100 0.564 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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