GREMLIN Database
MASZ - Malate synthase G
UniProt: P37330 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG20080
Length: 723 (712)
Sequences: 885 (515)
Seq/√Len: 19.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
411_T417_P5.8521.00
364_G409_I5.5441.00
23_E288_R5.1341.00
302_M309_I4.9611.00
56_E397_Q4.5021.00
49_E404_K4.1561.00
185_Y191_F3.9411.00
82_K574_D3.8211.00
365_V412_M3.7101.00
188_V200_I3.6321.00
147_I519_Y3.6251.00
695_D699_L3.5291.00
45_D408_R3.4551.00
82_K86_R3.4501.00
95_P440_A3.3821.00
351_D355_N3.3471.00
582_A587_W3.3131.00
169_W546_L3.2741.00
349_I362_L3.2731.00
402_A422_M3.2721.00
38_N412_M3.2601.00
95_P437_S3.1890.99
660_L697_I3.1320.99
46_L408_R3.0970.99
330_H382_R3.0860.99
58_D705_N3.0770.99
552_N555_S2.9730.99
699_L702_K2.9630.99
178_L238_I2.9040.99
715_W718_R2.9010.99
170_V259_V2.8980.99
8_S40_D2.8770.99
600_V697_I2.8690.99
244_A255_H2.8450.99
657_Q694_S2.7870.99
432_S488_N2.7750.98
437_S440_A2.7710.98
424_I446_V2.7290.98
711_L715_W2.7080.98
466_E647_R2.7010.98
193_V216_F2.6890.98
228_C239_E2.6870.98
683_N686_N2.6500.98
97_R436_R2.6450.98
47_A358_P2.6450.98
647_R701_V2.6320.98
240_L256_I2.6170.98
321_A325_S2.6150.98
386_V420_L2.5660.97
43_V357_I2.5530.97
178_L231_L2.5510.97
347_P717_L2.5350.97
20_V366_M2.5320.97
597_D659_S2.5200.97
263_A542_T2.4790.97
593_Q597_D2.4540.97
424_I442_A2.4520.97
556_V559_N2.4460.97
657_Q661_E2.4000.96
472_R587_W2.3670.96
19_F24_V2.3270.95
101_E444_N2.3200.95
191_F256_I2.3140.95
150_Q153_A2.3090.95
694_S698_F2.3060.95
418_N444_N2.2760.95
699_L714_A2.2610.95
215_Q233_N2.2430.94
39_F365_V2.2180.94
40_D44_H2.1970.94
185_Y256_I2.1950.94
625_N669_Q2.1920.94
9_R40_D2.1830.93
368_G420_L2.1670.93
694_S697_I2.1350.93
154_M165_Q2.1330.93
499_R554_Q2.1230.92
593_Q659_S2.1200.92
517_D520_S2.0970.92
246_G257_N2.0970.92
432_S576_L2.0960.92
100_V501_K2.0920.92
92_V396_P2.0580.91
343_L710_P2.0550.91
221_G226_P2.0520.91
371_A386_V2.0460.91
220_R228_C2.0380.91
466_E701_V1.9990.90
241_Q257_N1.9940.90
171_R252_D1.9920.90
176_E550_Q1.9890.90
153_A159_D1.9760.89
527_R556_V1.9750.89
695_D714_A1.9710.89
122_M286_L1.9440.89
56_E59_R1.9410.89
593_Q655_Q1.9330.88
299_Q312_K1.9100.88
594_Q624_H1.8930.87
695_D715_W1.8810.87
59_R63_A1.8670.87
241_Q260_I1.8670.87
683_N687_S1.8650.86
158_Y163_G1.8640.86
471_L479_T1.8630.86
46_L404_K1.8560.86
64_L463_S1.8500.86
657_Q698_F1.8380.86
318_H326_E1.8250.85
301_K309_I1.8250.85
682_G686_N1.8210.85
523_G551_T1.8170.85
361_I405_L1.8120.85
17_K21_D1.8100.85
267_T333_S1.8080.85
154_M161_Q1.8010.84
18_R22_E1.7920.84
49_E52_Q1.7720.83
271_C286_L1.7630.83
150_Q154_M1.7620.83
238_I261_V1.7590.83
100_V498_L1.7580.83
112_Q265_I1.7560.83
27_G373_Y1.7420.82
77_D80_A1.7400.82
488_N492_S1.7300.82
44_H352_S1.7200.82
86_R93_P1.7200.82
372_L376_K1.7160.81
266_S447_A1.7120.81
45_D404_K1.7090.81
228_C260_I1.7030.81
660_L694_S1.7020.81
216_F322_A1.6990.81
150_Q159_D1.6970.81
600_V642_I1.6880.80
665_K684_F1.6730.80
220_R227_T1.6720.80
28_T373_Y1.6670.79
150_Q165_Q1.6650.79
98_V440_A1.6600.79
66_E70_S1.6540.79
321_A327_I1.6490.79
612_E687_S1.6340.78
511_M514_L1.6300.78
169_W519_Y1.6260.78
280_A284_I1.6260.78
231_L240_L1.6230.77
336_F447_A1.6220.77
239_E317_R1.5980.76
14_A18_R1.5950.76
678_R719_E1.5830.76
303_E309_I1.5710.75
301_K308_Q1.5690.75
131_A313_L1.5670.75
64_L68_H1.5590.75
21_D32_A1.5550.74
688_C719_E1.5470.74
217_V322_A1.5440.74
346_I362_L1.5430.74
491_L571_P1.5350.73
4_T350_W1.5320.73
433_L576_L1.5280.73
511_M517_D1.5030.72
491_L563_T1.4930.71
487_R491_L1.4700.70
122_M285_L1.4690.70
24_V370_I1.4690.70
42_I412_M1.4680.70
112_Q336_F1.4640.70
588_S591_E1.4630.70
39_F43_V1.4460.69
107_S330_H1.4410.68
711_L718_R1.4400.68
152_G159_D1.4380.68
68_H81_Y1.4310.68
653_K657_Q1.4250.68
13_D280_A1.4250.68
488_N570_E1.4240.67
277_A286_L1.4190.67
342_H393_M1.4180.67
471_L476_M1.4140.67
69_R466_E1.4120.67
171_R253_P1.4100.67
261_V546_L1.4060.66
269_L335_L1.4050.66
7_Q17_K1.4050.66
597_D662_N1.4040.66
122_M277_A1.3900.66
470_M476_M1.3860.65
39_F357_I1.3750.65
611_V652_T1.3740.65
491_L570_E1.3710.64
121_A269_L1.3690.64
612_E719_E1.3590.64
471_L582_A1.3550.64
499_R561_A1.3450.63
237_H329_L1.3380.62
499_R558_A1.3360.62
695_D702_K1.3350.62
303_E306_G1.3330.62
19_F25_L1.3310.62
154_M159_D1.3290.62
71_N76_K1.3250.62
173_F238_I1.3220.62
39_F362_L1.3210.61
472_R594_Q1.3200.61
46_L400_A1.3190.61
175_D184_S1.3140.61
642_I656_V1.3120.61
43_V351_D1.3100.61
600_V660_L1.3050.61
122_M271_C1.3040.60
464_V470_M1.2980.60
582_A585_A1.2910.60
42_I365_V1.2840.59
470_M581_V1.2830.59
266_S330_H1.2740.59
688_C715_W1.2710.58
121_A286_L1.2700.58
474_N479_T1.2700.58
346_I717_L1.2670.58
149_P165_Q1.2630.58
38_N365_V1.2630.58
660_L690_F1.2570.58
511_M521_Q1.2550.57
4_T11_R1.2540.57
476_M579_I1.2460.57
5_I14_A1.2420.57
711_L714_A1.2410.57
16_F348_V1.2410.57
345_T710_P1.2400.56
346_I349_I1.2390.56
72_P76_K1.2340.56
242_I256_I1.2330.56
695_D711_L1.2320.56
403_N418_N1.2190.55
295_Q373_Y1.2150.55
192_K201_Q1.2150.55
600_V694_S1.2090.55
234_N552_N1.2070.54
653_K699_L1.2050.54
31_D34_A1.2030.54
171_R188_V1.2010.54
714_A718_R1.1970.54
173_F178_L1.1950.54
447_A532_T1.1900.53
400_A404_K1.1900.53
83_S87_E1.1890.53
40_D352_S1.1840.53
177_S238_I1.1810.53
470_M479_T1.1810.53
27_G295_Q1.1800.53
286_L294_M1.1770.53
404_K408_R1.1740.52
656_V698_F1.1700.52
514_L517_D1.1650.52
86_R574_D1.1630.52
488_N571_P1.1620.52
598_N623_I1.1590.51
682_G687_S1.1560.51
53_L401_F1.1550.51
39_F366_M1.1420.50
399_V442_A1.1380.50
21_D25_L1.1280.49
230_L239_E1.1270.49
411_T418_N1.1270.49
661_E684_F1.1230.49
107_S111_S1.1200.49
372_L415_M1.1190.49
193_V226_P1.1180.49
246_G255_H1.1180.49
564_E570_E1.1180.49
483_K487_R1.1150.49
46_L49_E1.1140.48
148_I159_D1.1140.48
563_T571_P1.1110.48
24_V28_T1.1070.48
464_V579_I1.1020.48
322_A327_I1.0990.48
602_G641_H1.0990.48
470_M579_I1.0970.47
519_Y546_L1.0940.47
51_R351_D1.0880.47
513_D619_K1.0880.47
50_N401_F1.0870.47
153_A161_Q1.0850.47
155_V159_D1.0830.47
403_N442_A1.0820.46
266_S596_L1.0810.46
658_A662_N1.0810.46
15_N281_E1.0760.46
24_V369_A1.0750.46
101_E443_R1.0740.46
75_V581_V1.0730.46
613_Q676_A1.0690.46
25_L369_A1.0680.46
563_T570_E1.0640.45
563_T572_L1.0630.45
582_A650_I1.0530.45
127_A269_L1.0480.44
403_N407_T1.0460.44
424_I482_I1.0440.44
661_E694_S1.0430.44
582_A586_N1.0410.44
68_H579_I1.0390.44
121_A337_I1.0350.44
42_I405_L1.0340.43
228_C241_Q1.0330.43
432_S571_P1.0330.43
167_I171_R1.0320.43
472_R582_A1.0320.43
491_L572_L1.0300.43
68_H467_A1.0290.43
576_L705_N1.0280.43
66_E69_R1.0270.43
149_P159_D1.0170.42
107_S383_T1.0140.42
106_D387_Y1.0130.42
56_E60_I1.0120.42
695_D698_F1.0120.42
20_V24_V1.0110.42
480_P575_D1.0100.42
60_I64_L1.0100.42
177_S233_N1.0080.42
266_S603_I1.0070.42
433_L573_L1.0050.42
710_P713_H0.9970.41
260_I319_Y0.9950.41
471_L474_N0.9950.41
50_N53_L0.9920.41
226_P252_D0.9910.41
589_A592_I0.9900.41
615_I683_N0.9890.41
30_L38_N0.9870.41
172_R186_Q0.9870.41
63_A87_E0.9850.40
198_L231_L0.9850.40
613_Q674_D0.9850.40
290_L294_M0.9800.40
350_W356_E0.9780.40
388_I420_L0.9740.40
94_Q436_R0.9730.40
69_R647_R0.9700.39
368_G386_V0.9670.39
94_Q98_V0.9660.39
599_N602_G0.9650.39
5_I17_K0.9590.39
230_L327_I0.9590.39
126_Y627_A0.9590.39
407_T417_P0.9560.39
112_Q263_A0.9550.39
598_N602_G0.9520.38
596_L659_S0.9520.38
242_I596_L0.9510.38
112_Q532_T0.9480.38
592_I651_L0.9470.38
173_F233_N0.9470.38
242_I248_I0.9410.38
3_Q14_A0.9370.37
687_S691_K0.9350.37
487_R571_P0.9310.37
149_P516_A0.9310.37
109_I336_F0.9280.37
19_F284_I0.9260.37
60_I88_L0.9260.37
217_V327_I0.9250.37
96_E437_S0.9240.37
442_A446_V0.9230.37
122_M437_S0.9180.36
6_T9_R0.9150.36
461_M470_M0.9150.36
596_L642_I0.9110.36
161_Q164_E0.9070.36
6_T40_D0.9010.35
151_E159_D0.8980.35
488_N572_L0.8970.35
488_N576_L0.8950.35
603_I660_L0.8920.35
291_L373_Y0.8910.35
81_Y464_V0.8890.35
336_F532_T0.8880.35
142_L169_W0.8870.35
202_L208_T0.8860.35
347_P356_E0.8800.34
159_D165_Q0.8780.34
167_I252_D0.8780.34
16_F284_I0.8770.34
661_E690_F0.8760.34
148_I152_G0.8760.34
183_G208_T0.8760.34
248_I519_Y0.8740.34
343_L713_H0.8730.34
165_Q169_W0.8730.34
145_S515_M0.8720.34
269_L290_L0.8660.33
690_F694_S0.8620.33
71_N80_A0.8620.33
109_I266_S0.8590.33
64_L266_S0.8590.33
323_D327_I0.8590.33
665_K669_Q0.8580.33
178_L229_I0.8570.33
472_R591_E0.8540.33
343_L360_G0.8540.33
72_P75_V0.8540.33
44_H353_E0.8510.33
169_W172_R0.8480.32
659_S662_N0.8480.32
212_T215_Q0.8460.32
71_N75_V0.8460.32
171_R200_I0.8410.32
684_F694_S0.8410.32
471_L587_W0.8390.32
351_D666_V0.8390.32
11_R354_G0.8390.32
126_Y572_L0.8380.32
442_A482_I0.8370.32
71_N581_V0.8370.32
153_A165_Q0.8360.32
294_M374_D0.8360.32
555_S559_N0.8340.32
28_T372_L0.8330.32
154_M169_W0.8300.31
487_R570_E0.8290.31
170_V260_I0.8290.31
271_C337_I0.8280.31
642_I697_I0.8270.31
573_L578_T0.8260.31
343_L705_N0.8250.31
612_E689_A0.8230.31
13_D284_I0.8190.31
24_V238_I0.8180.31
642_I659_S0.8170.31
221_G228_C0.8160.31
472_R585_A0.8160.31
360_G710_P0.8160.31
12_I109_I0.8150.31
92_V397_Q0.8150.31
194_V199_R0.8130.30
64_L75_V0.8130.30
223_A226_P0.8110.30
121_A294_M0.8100.30
147_I169_W0.8090.30
7_Q21_D0.8080.30
197_Q213_P0.8080.30
573_L576_L0.8070.30
261_V542_T0.8070.30
64_L464_V0.8050.30
113_A554_Q0.8040.30
7_Q12_I0.8010.30
12_I66_E0.8010.30
13_D347_P0.8010.30
55_A59_R0.8000.30
185_Y188_V0.8000.30
261_V383_T0.7990.30
521_Q532_T0.7990.30
19_F582_A0.7990.30
257_N260_I0.7980.30
433_L488_N0.7960.30
669_Q681_A0.7950.29
407_T411_T0.7940.29
164_E335_L0.7940.29
235_G265_I0.7930.29
190_A201_Q0.7920.29
472_R475_Q0.7920.29
368_G422_M0.7910.29
369_A714_A0.7870.29
487_R526_L0.7870.29
76_K80_A0.7860.29
239_E319_Y0.7850.29
269_L294_M0.7850.29
688_C718_R0.7830.29
532_T635_L0.7810.29
352_S355_N0.7810.29
150_Q161_Q0.7760.28
196_K223_A0.7740.28
680_M684_F0.7740.28
699_L715_W0.7700.28
126_Y587_W0.7700.28
488_N491_L0.7680.28
232_K312_K0.7670.28
87_E469_P0.7670.28
152_G161_Q0.7670.28
371_A714_A0.7650.28
482_I526_L0.7650.28
170_V253_P0.7640.28
597_D655_Q0.7630.28
95_P98_V0.7630.28
67_W80_A0.7620.28
475_Q587_W0.7620.28
484_A571_P0.7590.28
659_S666_V0.7580.28
446_V482_I0.7580.28
149_P152_G0.7580.28
526_L530_A0.7580.28
159_D560_I0.7570.27
475_Q479_T0.7560.27
193_V299_Q0.7530.27
403_N444_N0.7530.27
181_E208_T0.7520.27
52_Q56_E0.7510.27
585_A592_I0.7500.27
665_K682_G0.7500.27
28_T369_A0.7500.27
266_S531_N0.7500.27
440_A443_R0.7490.27
302_M422_M0.7490.27
64_L76_K0.7480.27
168_A172_R0.7470.27
94_Q440_A0.7470.27
492_S495_F0.7450.27
528_A560_I0.7440.27
112_Q554_Q0.7430.27
501_K554_Q0.7430.27
43_V581_V0.7420.27
510_A521_Q0.7420.27
368_G447_A0.7410.27
122_M300_E0.7400.27
173_F177_S0.7390.27
321_A326_E0.7370.26
514_L627_A0.7360.26
300_E309_I0.7360.26
488_N573_L0.7360.26
431_T438_C0.7350.26
124_A289_N0.7330.26
243_D257_N0.7310.26
149_P154_M0.7310.26
335_L510_A0.7300.26
386_V415_M0.7300.26
624_H642_I0.7290.26
594_Q602_G0.7290.26
528_A554_Q0.7290.26
330_H383_T0.7290.26
375_L379_K0.7280.26
317_R327_I0.7280.26
581_V585_A0.7270.26
46_L407_T0.7270.26
441_Q469_P0.7270.26
635_L705_N0.7270.26
41_E45_D0.7260.26
69_R443_R0.7250.26
263_A333_S0.7230.26
240_L254_A0.7230.26
271_C511_M0.7220.26
76_K579_I0.7210.26
432_S570_E0.7210.26
654_E659_S0.7190.26
625_N666_V0.7190.26
271_C294_M0.7190.26
28_T376_K0.7180.26
188_V191_F0.7180.26
461_M479_T0.7170.26
203_K253_P0.7170.26
680_M687_S0.7160.25
91_L433_L0.7140.25
19_F365_V0.7130.25
657_Q690_F0.7130.25
302_M308_Q0.7120.25
417_P442_A0.7120.25
556_V560_I0.7100.25
10_L349_I0.7090.25
64_L84_F0.7080.25
705_N710_P0.7070.25
19_F545_A0.7060.25
260_I317_R0.7060.25
400_A408_R0.7040.25
27_G291_L0.7030.25
192_K217_V0.7020.25
424_I650_I0.7020.25
234_N362_L0.7020.25
269_L330_H0.7020.25
510_A523_G0.7000.25
139_Y252_D0.7000.25
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364_G594_Q0.5160.17
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216_F221_G0.5140.17
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354_G705_N0.5110.17
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75_V78_K0.5110.17
393_M512_P0.5110.17
372_L413_L0.5110.17
238_I721_E0.5110.17
261_V654_E0.5110.17
269_L302_M0.5100.17
368_G388_I0.5100.17
307_R349_I0.5100.17
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402_A679_P0.5090.17
63_A184_S0.5090.17
189_V253_P0.5080.17
43_V717_L0.5080.17
335_L411_T0.5080.17
64_L471_L0.5080.17
14_A17_K0.5080.17
46_L361_I0.5080.17
217_V230_L0.5070.17
470_M594_Q0.5070.17
91_L94_Q0.5060.17
281_E330_H0.5060.17
177_S546_L0.5050.17
100_V499_R0.5050.17
173_F257_N0.5050.17
112_Q572_L0.5040.17
238_I260_I0.5040.17
199_R204_N0.5040.17
641_H659_S0.5040.17
87_E564_E0.5030.17
168_A186_Q0.5030.17
159_D297_T0.5020.17
225_A654_E0.5020.17
171_R369_A0.5020.17
4_T482_I0.5010.16
122_M126_Y0.5010.16
476_M488_N0.5000.16
173_F261_V0.5000.16
126_Y309_I0.5000.16
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3s9zA 1 0.9779 100 0.362 Contact Map
1p7tA 1 0.982 100 0.381 Contact Map
3cuxA 1 0.668 100 0.824 Contact Map
3cuzA 1 0.6985 100 0.83 Contact Map
3oyzA 5 0.4274 98.6 0.974 Contact Map
3r4iA 5 0.4371 98.5 0.975 Contact Map
3qqwA 3 0.4039 98 0.978 Contact Map
4roqA 5 0.4232 97.5 0.98 Contact Map
4l80A 5 0.4205 97.3 0.981 Contact Map
4l9zA 5 0.4094 96.8 0.982 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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