GREMLIN Database
AEGA - Protein AegA
UniProt: P37127 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG12409
Length: 659 (504)
Sequences: 142 (87)
Seq/√Len: 3.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
269_N275_T5.2700.95
621_F650_W4.7900.92
512_E515_N4.0130.82
432_N564_V3.9730.82
535_N539_H3.5160.73
250_I300_I3.3160.68
605_A646_G3.2170.65
370_I375_L3.1550.64
356_Y413_Y3.1040.62
633_V636_A2.8740.56
151_S400_V2.8580.56
242_L636_A2.8510.55
257_N260_A2.6420.50
270_T308_S2.5600.47
300_I452_V2.5150.46
508_G511_K2.5070.46
628_R639_E2.4930.45
487_A550_L2.4880.45
412_Q618_P2.4810.45
344_D449_T2.4680.45
450_K458_L2.4500.44
400_V565_E2.4450.44
500_R507_P2.3730.42
180_V400_V2.3500.41
398_C637_M2.3310.41
333_I572_P2.3190.40
488_L521_A2.3010.40
355_V394_F2.2930.40
223_E303_I2.2160.38
481_M485_R2.1720.36
516_A520_G2.1430.36
500_R508_G2.1320.35
500_R504_A2.1130.35
564_V645_Q2.0910.34
443_P595_V2.0600.34
324_T650_W2.0370.33
168_P172_S2.0340.33
374_K632_L2.0260.33
579_A643_A2.0180.32
537_Q618_P2.0110.32
234_S275_T2.0040.32
450_K463_F2.0020.32
487_A594_G1.9640.31
231_G341_A1.9370.30
231_G576_V1.9270.30
332_I353_V1.9220.30
549_R642_H1.9160.30
252_L469_L1.9090.30
212_Y299_T1.8910.29
542_G576_V1.8540.29
536_E650_W1.8510.28
540_V543_I1.8460.28
519_E523_F1.8390.28
353_V531_A1.8300.28
500_R511_K1.8290.28
275_T639_E1.8250.28
201_I353_V1.8100.27
202_E405_S1.8050.27
504_A508_G1.8040.27
430_L533_E1.7960.27
544_R647_I1.7930.27
164_Q412_Q1.7860.27
506_M509_S1.7780.27
269_N310_Q1.7760.27
366_L370_I1.7560.26
573_A621_F1.7490.26
333_I418_V1.7380.26
329_R365_L1.7200.25
255_A488_L1.7160.25
234_S484_V1.7110.25
432_N465_N1.6950.25
354_T470_N1.6950.25
184_V187_M1.6850.25
417_F643_A1.6830.25
504_A510_K1.6800.25
281_Q373_F1.6730.24
228_L386_I1.6720.24
231_G269_N1.6600.24
250_I516_A1.6600.24
265_S268_T1.6500.24
253_V639_E1.6420.24
297_A619_K1.6410.24
148_V189_A1.6280.24
299_T303_I1.6250.23
613_Y639_E1.6120.23
155_K576_V1.6110.23
270_T275_T1.6030.23
228_L365_L1.5770.23
332_I439_Y1.5670.22
158_R162_A1.5540.22
249_W539_H1.5530.22
166_H175_A1.5490.22
479_T641_R1.5470.22
260_A470_N1.5430.22
223_E463_F1.5430.22
504_A555_A1.5360.22
366_L375_L1.5320.22
211_I595_V1.5300.22
402_K472_V1.5200.21
300_I313_A1.5040.21
152_G175_A1.5020.21
506_M510_K1.5020.21
519_E636_A1.4940.21
501_R504_A1.4920.21
224_A488_L1.4900.21
188_Q647_I1.4900.21
490_H639_E1.4750.21
504_A507_P1.4680.20
202_E400_V1.4610.20
503_E508_G1.4590.20
275_T642_H1.4560.20
458_L463_F1.4440.20
234_S269_N1.4420.20
300_I550_L1.4370.20
359_H569_F1.4310.20
501_R508_G1.4210.20
528_Q548_T1.4170.19
155_K487_A1.4140.19
383_R582_F1.4090.19
500_R503_E1.4050.19
395_E469_L1.4030.19
578_M637_M1.3980.19
478_D632_L1.3950.19
245_H248_Q1.3950.19
201_I207_G1.3930.19
529_P573_A1.3890.19
275_T583_N1.3860.19
268_T303_I1.3830.19
269_N382_R1.3700.19
478_D634_V1.3700.19
504_A509_S1.3660.19
449_T473_V1.3630.19
268_T628_R1.3530.18
182_S411_E1.3500.18
275_T308_S1.3480.18
425_S505_N1.3470.18
440_D505_N1.3400.18
220_A223_E1.3370.18
224_A554_D1.3350.18
315_G486_T1.3190.18
200_A604_I1.3180.18
255_A472_V1.3180.18
256_G500_R1.3170.18
604_I616_T1.3160.18
484_V602_R1.3150.18
237_E303_I1.3140.18
374_K478_D1.3080.18
168_P549_R1.3040.18
373_F499_Y1.3040.18
503_E509_S1.3030.18
223_E252_L1.2970.17
389_A596_T1.2940.17
424_R554_D1.2880.17
619_K647_I1.2830.17
303_I354_T1.2800.17
647_I651_L1.2740.17
501_R506_M1.2690.17
504_A511_K1.2610.17
295_H450_K1.2580.17
466_T469_L1.2560.17
418_V537_Q1.2560.17
292_R637_M1.2460.17
470_N572_P1.2450.17
281_Q301_G1.2450.17
260_A469_L1.2430.17
374_K383_R1.2430.17
224_A643_A1.2350.16
244_N582_F1.2300.16
195_E215_F1.2300.16
438_V520_G1.2240.16
561_P626_A1.2240.16
200_A389_A1.2230.16
329_R452_V1.2200.16
394_F486_T1.2100.16
402_K405_S1.2100.16
330_V413_Y1.2080.16
154_A251_E1.2080.16
430_L618_P1.2080.16
244_N383_R1.2030.16
389_A537_Q1.2030.16
420_V434_D1.2000.16
156_S494_N1.1940.16
330_V415_A1.1910.16
315_G394_F1.1860.16
570_V636_A1.1850.16
152_G407_D1.1810.16
402_K550_L1.1800.16
208_F438_V1.1780.16
437_G615_T1.1760.16
622_A636_A1.1760.16
256_G501_R1.1740.15
188_Q530_V1.1720.15
356_Y389_A1.1710.15
244_N273_E1.1650.15
398_C413_Y1.1590.15
251_E472_V1.1550.15
292_R487_A1.1460.15
424_R505_N1.1400.15
342_C513_V1.1360.15
539_H618_P1.1340.15
231_G637_M1.1330.15
252_L257_N1.1300.15
356_Y400_V1.1280.15
143_Q347_T1.1260.15
273_E383_R1.1260.15
354_T381_A1.1250.15
184_V327_D1.1240.15
521_A583_N1.1230.15
307_I383_R1.1180.15
511_K603_I1.1160.15
238_W357_D1.1140.15
162_A436_P1.1100.15
147_D543_I1.1080.15
379_L398_C1.1030.14
425_S440_D1.1030.14
404_V604_I1.1000.14
425_S554_D1.0990.14
202_E416_V1.0980.14
295_H353_V1.0940.14
147_D351_V1.0940.14
249_W275_T1.0940.14
519_E579_A1.0920.14
281_Q499_Y1.0910.14
437_G444_F1.0890.14
595_V620_I1.0720.14
273_E582_F1.0700.14
223_E637_M1.0670.14
626_A630_A1.0650.14
218_D564_V1.0630.14
584_P602_R1.0620.14
501_R509_S1.0610.14
503_E507_P1.0610.14
272_P401_G1.0560.14
327_D354_T1.0520.14
433_E499_Y1.0510.14
367_T453_M1.0500.14
403_D474_L1.0480.14
287_G409_L1.0450.14
404_V597_V1.0450.14
642_H645_Q1.0430.14
553_P563_P1.0420.14
223_E354_T1.0360.14
156_S647_I1.0350.14
204_R210_E1.0300.13
382_R639_E1.0290.13
366_L603_I1.0260.13
406_L607_V1.0240.13
253_V269_N1.0210.13
179_P596_T1.0120.13
502_D509_S1.0120.13
530_V534_L1.0110.13
590_L621_F1.0100.13
202_E250_I1.0070.13
269_N642_H1.0060.13
232_E645_Q1.0060.13
500_R506_M1.0050.13
415_A647_I0.9980.13
518_E528_Q0.9960.13
175_A400_V0.9950.13
262_V319_D0.9940.13
149_A408_S0.9930.13
596_T604_I0.9870.13
404_V536_E0.9810.13
404_V596_T0.9810.13
537_Q596_T0.9800.13
405_S411_E0.9750.13
153_M393_H0.9740.13
330_V647_I0.9700.13
216_R645_Q0.9680.13
383_R634_V0.9680.13
419_G453_M0.9670.13
303_I332_I0.9660.13
515_N520_G0.9660.13
274_I351_V0.9640.13
417_F623_G0.9610.13
278_V286_E0.9550.12
502_D508_G0.9520.12
215_F349_N0.9490.12
269_N639_E0.9470.12
253_V414_D0.9470.12
215_F319_D0.9460.12
146_T354_T0.9440.12
404_V543_I0.9410.12
487_A606_D0.9410.12
162_A167_Q0.9400.12
370_I403_D0.9400.12
253_V275_T0.9370.12
353_V622_A0.9360.12
341_A354_T0.9360.12
261_A304_E0.9360.12
166_H213_L0.9310.12
625_D644_A0.9300.12
444_F487_A0.9300.12
624_G644_A0.9300.12
640_G644_A0.9300.12
625_D640_G0.9300.12
624_G640_G0.9300.12
487_A541_C0.9290.12
218_D543_I0.9290.12
393_H410_L0.9250.12
262_V626_A0.9210.12
501_R507_P0.9200.12
217_A412_Q0.9200.12
403_D447_A0.9200.12
252_L260_A0.9200.12
549_R612_R0.9160.12
164_Q537_Q0.9160.12
380_L563_P0.9150.12
631_D635_T0.9150.12
332_I604_I0.9080.12
273_E483_C0.9080.12
509_S518_E0.9060.12
201_I547_R0.9050.12
301_G373_F0.9030.12
430_L550_L0.9030.12
400_V522_N0.9020.12
197_D431_P0.9020.12
473_V507_P0.9010.12
474_L548_T0.8990.12
524_E571_M0.8980.12
481_M636_A0.8970.12
223_E326_V0.8970.12
316_W582_F0.8960.12
253_V411_E0.8920.12
413_Y591_E0.8910.12
389_A410_L0.8880.12
281_Q304_E0.8870.12
419_G473_V0.8840.12
269_N549_R0.8840.12
225_S600_W0.8830.12
152_G408_S0.8830.12
405_S460_E0.8790.12
270_T571_M0.8790.12
329_R444_F0.8770.12
525_F558_R0.8760.12
420_V484_V0.8760.12
602_R639_E0.8750.12
249_W639_E0.8750.12
170_H175_A0.8730.11
353_V392_I0.8730.11
249_W268_T0.8710.11
237_E505_N0.8700.11
569_F626_A0.8670.11
379_L437_G0.8660.11
537_Q620_I0.8650.11
206_T543_I0.8620.11
253_V467_A0.8620.11
400_V604_I0.8600.11
483_C582_F0.8600.11
189_A333_I0.8590.11
166_H618_P0.8590.11
290_T422_T0.8570.11
464_I621_F0.8560.11
151_S564_V0.8550.11
220_A607_V0.8540.11
207_G259_D0.8540.11
208_F580_F0.8530.11
444_F615_T0.8530.11
262_V269_N0.8520.11
244_N374_K0.8520.11
183_K493_S0.8500.11
157_R185_E0.8490.11
427_K550_L0.8470.11
211_I443_P0.8470.11
174_A649_D0.8470.11
422_T619_K0.8440.11
161_T170_H0.8420.11
357_D525_F0.8400.11
558_R643_A0.8380.11
507_P511_K0.8360.11
183_K327_D0.8350.11
447_A462_P0.8340.11
398_C612_R0.8310.11
203_A218_D0.8300.11
349_N494_N0.8300.11
626_A637_M0.8300.11
244_N307_I0.8300.11
156_S389_A0.8300.11
513_V520_G0.8260.11
183_K187_M0.8250.11
346_L415_A0.8240.11
153_M157_R0.8230.11
204_R401_G0.8220.11
210_E401_G0.8220.11
481_M519_E0.8220.11
356_Y536_E0.8220.11
392_I450_K0.8210.11
175_A537_Q0.8200.11
358_R478_D0.8190.11
229_K234_S0.8170.11
500_R509_S0.8160.11
311_A402_K0.8150.11
159_L533_E0.8120.11
292_R521_A0.8120.11
211_I633_V0.8120.11
384_R392_I0.8110.11
224_A592_S0.8110.11
514_K628_R0.8100.11
152_G174_A0.8080.11
158_R330_V0.8070.11
257_N466_T0.8040.11
237_E248_Q0.8020.11
496_T525_F0.7990.11
215_F224_A0.7980.11
268_T327_D0.7980.11
353_V545_F0.7970.11
623_G643_A0.7960.11
491_G604_I0.7950.11
487_A642_H0.7920.11
202_E645_Q0.7910.11
234_S602_R0.7890.11
275_T310_Q0.7870.11
546_L549_R0.7870.11
396_L573_A0.7870.11
552_E626_A0.7860.11
353_V450_K0.7830.10
375_L603_I0.7830.10
316_W383_R0.7820.10
258_I312_L0.7820.10
642_H646_G0.7810.10
376_D647_I0.7800.10
216_R555_A0.7760.10
218_D597_V0.7760.10
411_E543_I0.7750.10
330_V544_R0.7740.10
286_E629_G0.7710.10
342_C620_I0.7710.10
480_A577_I0.7690.10
374_K582_F0.7680.10
186_Q356_Y0.7680.10
248_Q488_L0.7670.10
315_G355_V0.7670.10
311_A346_L0.7660.10
469_L486_T0.7650.10
158_R161_T0.7640.10
360_P480_A0.7610.10
187_M293_D0.7600.10
234_S571_M0.7590.10
152_G166_H0.7560.10
365_L634_V0.7550.10
280_P304_E0.7540.10
381_A393_H0.7530.10
290_T474_L0.7510.10
417_F647_I0.7510.10
304_E373_F0.7500.10
326_V652_G0.7500.10
554_D558_R0.7480.10
598_D602_R0.7450.10
400_V592_S0.7430.10
321_S487_A0.7410.10
159_L169_W0.7380.10
224_A521_A0.7380.10
151_S549_R0.7360.10
599_K647_I0.7360.10
318_P422_T0.7340.10
200_A404_V0.7330.10
234_S425_S0.7320.10
284_L631_D0.7320.10
166_H172_S0.7320.10
591_E646_G0.7310.10
275_T607_V0.7310.10
203_A402_K0.7300.10
436_P443_P0.7290.10
266_H387_F0.7290.10
305_R523_F0.7280.10
266_H357_D0.7280.10
450_K460_E0.7260.10
300_I562_V0.7220.10
354_T398_C0.7210.10
330_V651_L0.7210.10
214_P636_A0.7210.10
190_T642_H0.7210.10
383_R478_D0.7200.10
542_G570_V0.7200.10
251_E522_N0.7170.10
167_Q175_A0.7170.10
527_V561_P0.7160.10
344_D448_N0.7140.10
481_M627_V0.7140.10
523_F551_G0.7140.10
556_Q602_R0.7130.10
439_Y450_K0.7130.10
354_T463_F0.7120.10
254_K605_A0.7110.10
535_N566_G0.7100.10
442_L631_D0.7070.10
519_E643_A0.7040.10
199_L637_M0.7040.10
415_A472_V0.7030.10
509_S520_G0.7030.10
450_K565_E0.7010.10
201_I349_N0.6990.10
148_V411_E0.6990.10
523_F553_P0.6990.10
261_A280_P0.6980.10
304_E582_F0.6970.10
232_E255_A0.6970.10
307_I582_F0.6950.10
356_Y617_N0.6940.10
257_N616_T0.6930.10
395_E410_L0.6910.10
144_L532_L0.6910.10
201_I215_F0.6890.10
395_E412_Q0.6890.10
226_R557_G0.6870.09
226_R581_G0.6870.09
445_L581_G0.6870.09
227_C445_L0.6870.09
227_C557_G0.6870.09
227_C581_G0.6870.09
445_L557_G0.6870.09
230_C557_G0.6870.09
230_C581_G0.6870.09
230_C445_L0.6870.09
226_R445_L0.6870.09
557_G581_G0.6870.09
226_R230_C0.6870.09
227_C230_C0.6870.09
485_R520_G0.6870.09
312_L322_H0.6860.09
160_R170_H0.6850.09
143_Q487_A0.6840.09
383_R632_L0.6840.09
373_F433_E0.6820.09
319_D322_H0.6800.09
180_V460_E0.6800.09
188_Q293_D0.6800.09
148_V404_V0.6780.09
385_E402_K0.6780.09
257_N393_H0.6770.09
448_N463_F0.6760.09
370_I603_I0.6740.09
202_E413_Y0.6730.09
376_D448_N0.6730.09
375_L403_D0.6720.09
339_G369_G0.6710.09
155_K537_Q0.6710.09
512_E518_E0.6710.09
260_A636_A0.6710.09
224_A411_E0.6700.09
417_F519_E0.6700.09
366_L377_K0.6690.09
529_P540_V0.6690.09
583_N647_I0.6680.09
253_V431_P0.6670.09
190_T288_A0.6660.09
356_Y599_K0.6640.09
402_K541_C0.6640.09
273_E374_K0.6630.09
398_C470_N0.6610.09
412_Q542_G0.6600.09
184_V188_Q0.6600.09
430_L434_D0.6590.09
633_V643_A0.6580.09
450_K465_N0.6580.09
488_L613_Y0.6560.09
172_S354_T0.6550.09
537_Q543_I0.6530.09
231_G571_M0.6520.09
622_A633_V0.6500.09
377_K568_E0.6500.09
249_W303_I0.6490.09
165_E420_V0.6490.09
262_V429_G0.6480.09
531_A544_R0.6460.09
411_E618_P0.6460.09
210_E272_P0.6460.09
204_R272_P0.6460.09
351_V648_I0.6450.09
242_L329_R0.6450.09
186_Q379_L0.6440.09
402_K522_N0.6430.09
209_D535_N0.6430.09
175_A408_S0.6420.09
400_V648_I0.6390.09
353_V400_V0.6390.09
292_R524_E0.6360.09
244_N316_W0.6360.09
379_L637_M0.6320.09
433_E627_V0.6320.09
393_H431_P0.6310.09
190_T232_E0.6310.09
269_N524_E0.6310.09
359_H392_I0.6310.09
263_E431_P0.6310.09
199_L207_G0.6300.09
355_V469_L0.6300.09
244_N634_V0.6290.09
406_L591_E0.6280.09
220_A228_L0.6260.09
259_D469_L0.6250.09
255_A395_E0.6250.09
400_V563_P0.6250.09
200_A332_I0.6250.09
166_H200_A0.6240.09
269_N414_D0.6240.09
242_L267_Q0.6240.09
516_A523_F0.6240.09
365_L478_D0.6230.09
270_T379_L0.6200.09
267_Q572_P0.6190.09
245_H275_T0.6190.09
353_V404_V0.6190.09
186_Q225_S0.6180.09
327_D628_R0.6180.09
521_A549_R0.6180.09
487_A637_M0.6180.09
273_E634_V0.6160.09
164_Q356_Y0.6160.09
187_M639_E0.6160.09
376_D389_A0.6150.09
465_N619_K0.6150.09
376_D511_K0.6140.09
212_Y302_N0.6140.09
177_E310_Q0.6130.09
492_A572_P0.6130.09
292_R393_H0.6130.09
439_Y577_I0.6120.09
540_V576_V0.6090.09
530_V540_V0.6070.09
199_L494_N0.6060.09
484_V607_V0.6060.09
261_A492_A0.6050.09
466_T619_K0.6040.09
166_H257_N0.6040.09
183_K190_T0.6030.09
562_V565_E0.6010.09
318_P614_Q0.6010.09
145_V149_A0.5980.09
636_A643_A0.5980.09
591_E633_V0.5960.09
174_A297_A0.5950.09
269_N583_N0.5940.09
426_M648_I0.5930.09
433_E485_R0.5910.09
554_D651_L0.5900.09
354_T531_A0.5890.09
187_M191_P0.5880.09
275_T382_R0.5870.09
423_Y635_T0.5870.09
200_A465_N0.5870.09
376_D383_R0.5870.09
509_S526_N0.5860.09
411_E649_D0.5850.09
165_E537_Q0.5810.09
428_A626_A0.5800.08
404_V616_T0.5800.08
433_E481_M0.5800.08
149_A536_E0.5780.08
373_F501_R0.5780.08
244_N632_L0.5780.08
307_I632_L0.5750.08
287_G620_I0.5750.08
381_A470_N0.5750.08
527_V588_P0.5750.08
253_V524_E0.5740.08
596_T616_T0.5730.08
347_T561_P0.5720.08
298_V304_E0.5710.08
299_T402_K0.5710.08
223_E312_L0.5700.08
341_A612_R0.5680.08
383_R585_H0.5670.08
400_V596_T0.5660.08
448_N490_H0.5660.08
243_H481_M0.5650.08
346_L441_A0.5650.08
570_V605_A0.5640.08
331_A566_G0.5640.08
583_N651_L0.5640.08
278_V500_R0.5630.08
303_I613_Y0.5620.08
194_G303_I0.5620.08
217_A459_P0.5620.08
312_L469_L0.5610.08
147_D232_E0.5600.08
168_P389_A0.5600.08
515_N585_H0.5590.08
405_S535_N0.5590.08
374_K511_K0.5560.08
223_E450_K0.5550.08
315_G374_K0.5540.08
300_I487_A0.5540.08
223_E327_D0.5500.08
548_T630_A0.5500.08
177_E202_E0.5500.08
506_M511_K0.5490.08
520_G627_V0.5480.08
242_L299_T0.5480.08
292_R381_A0.5460.08
416_V521_A0.5460.08
214_P405_S0.5460.08
569_F588_P0.5430.08
332_I341_A0.5420.08
443_P548_T0.5410.08
225_S347_T0.5410.08
280_P500_R0.5400.08
335_A360_P0.5400.08
493_S562_V0.5400.08
231_G275_T0.5400.08
560_R590_L0.5390.08
225_S328_K0.5390.08
272_P366_L0.5370.08
438_V605_A0.5370.08
154_A260_A0.5360.08
503_E518_E0.5360.08
281_Q501_R0.5360.08
275_T524_E0.5350.08
301_G499_Y0.5350.08
400_V536_E0.5330.08
242_L392_I0.5320.08
168_P175_A0.5320.08
358_R374_K0.5320.08
382_R479_T0.5310.08
219_Q268_T0.5310.08
431_P594_G0.5300.08
156_S496_T0.5300.08
408_S444_F0.5290.08
368_F422_T0.5290.08
225_S648_I0.5280.08
195_E613_Y0.5250.08
212_Y636_A0.5240.08
231_G382_R0.5240.08
314_K457_E0.5230.08
366_L492_A0.5220.08
611_Y642_H0.5220.08
162_A452_V0.5220.08
149_A161_T0.5220.08
284_L423_Y0.5210.08
242_L633_V0.5190.08
183_K596_T0.5180.08
166_H470_N0.5170.08
615_T620_I0.5150.08
395_E490_H0.5140.08
300_I314_K0.5130.08
487_A549_R0.5130.08
275_T429_G0.5120.08
356_Y410_L0.5120.08
451_Q616_T0.5110.08
272_P304_E0.5110.08
345_V351_V0.5100.08
423_Y478_D0.5100.08
332_I465_N0.5090.08
273_E307_I0.5090.08
328_K354_T0.5090.08
161_T166_H0.5080.08
411_E460_E0.5080.08
267_Q452_V0.5060.08
284_L442_L0.5060.08
530_V546_L0.5050.08
299_T633_V0.5040.08
287_G486_T0.5030.08
362_I496_T0.5010.08
330_V340_L0.5010.08
213_L549_R0.5000.08
173_T537_Q0.5000.08
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1gteA 4 0.7466 100 0.609 Contact Map
4ylfB 1 0.7041 100 0.61 Contact Map
2vdcG 1 0.6798 100 0.616 Contact Map
1cjcA 1 0.481 100 0.83 Contact Map
1lqtA 1 0.4795 100 0.837 Contact Map
1mo9A 2 0.4962 100 0.846 Contact Map
1hyuA 2 0.6859 100 0.852 Contact Map
3ctyA 2 0.4355 100 0.858 Contact Map
1vdcA 2 0.4537 100 0.86 Contact Map
2a87A 2 0.4431 100 0.862 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.014 seconds.