NORR - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

NORR - Anaerobic nitric oxide reductase transcription regulator NorR

UniProt:	P37013	Sequences: MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12108
Length:	504 (438)
Sequences:	12407 (8908)
Seq/√Len:	425.6

ECOLI - NORR HYFR NTRC GLRR FHLA ATOC DHAR YGEV ZRAR RTCR PRPR TYRR
BACSU - ACOR YQIR ROCR

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
334_E	339_R	4.181	1.00
216_E	359_R	3.744	1.00
475_N	485_M	3.719	1.00
260_V	270_N	3.615	1.00
245_A	297_A	3.286	1.00
333_E	337_A	3.165	1.00
276_E	310_R	3.127	1.00
274_K	309_Q	3.048	1.00
249_E	294_A	2.880	1.00
307_D	316_C	2.864	1.00
375_Q	408_E	2.788	1.00
68_F	85_V	2.715	1.00
201_I	224_V	2.647	1.00
308_I	319_V	2.619	1.00
307_D	318_R	2.580	1.00
465_R	469_R	2.565	1.00
475_N	482_C	2.565	1.00
329_R	334_E	2.551	1.00
330_D	333_E	2.426	1.00
467_T	471_A	2.412	1.00
275_F	302_V	2.370	1.00
481_A	484_R	2.321	1.00
203_I	419_R	2.294	1.00
99_D	102_I	2.292	1.00
73_H	98_Y	2.291	1.00
366_I	392_R	2.265	1.00
388_S	424_G	2.228	1.00
387_L	411_I	2.199	1.00
284_F	326_A	2.185	1.00
369_A	387_L	2.182	1.00
474_Q	485_M	2.166	1.00
309_Q	316_C	2.158	1.00
260_V	313_D	2.120	1.00
366_I	396_Q	2.098	1.00
334_E	337_A	2.035	1.00
53_P	71_E	2.027	1.00
72_G	75_R	2.023	1.00
304_Q	408_E	1.989	1.00
234_R	320_D	1.986	1.00
280_N	320_D	1.937	1.00
224_V	355_V	1.917	1.00
400_F	410_A	1.898	1.00
275_F	283_L	1.882	1.00
333_E	336_L	1.865	1.00
46_Y	76_L	1.860	1.00
138_F	156_A	1.844	1.00
398_Y	401_P	1.836	1.00
219_T	355_V	1.827	1.00
362_G	366_I	1.821	1.00
214_S	354_S	1.811	1.00
491_A	495_R	1.797	1.00
391_A	395_L	1.790	1.00
260_V	310_R	1.790	1.00
253_E	298_K	1.775	1.00
303_L	323_V	1.768	1.00
290_E	329_R	1.765	1.00
53_P	69_A	1.747	1.00
464_Q	496_L	1.739	1.00
190_L	367_L	1.739	1.00
325_A	348_L	1.713	1.00
44_L	70_L	1.707	1.00
222_E	301_R	1.693	1.00
471_A	475_N	1.676	1.00
197_L	353_L	1.673	1.00
71_E	75_R	1.657	1.00
461_E	499_R	1.656	1.00
370_G	392_R	1.643	1.00
202_E	231_A	1.630	1.00
302_V	308_I	1.623	1.00
388_S	391_A	1.622	1.00
209_L	412_H	1.604	1.00
214_S	352_P	1.599	1.00
279_D	319_V	1.598	1.00
369_A	411_I	1.585	1.00
390_G	425_D	1.576	1.00
42_A	66_R	1.565	1.00
313_D	317_L	1.562	1.00
74_P	96_D	1.558	1.00
87_R	153_A	1.552	1.00
362_G	399_S	1.542	1.00
362_G	365_V	1.538	1.00
391_A	425_D	1.519	1.00
162_L	166_L	1.507	1.00
191_S	363_D	1.489	1.00
199_K	202_E	1.486	1.00
391_A	423_S	1.483	1.00
392_R	396_Q	1.483	1.00
105_Q	135_P	1.474	1.00
271_R	314_D	1.470	1.00
371_Y	375_Q	1.470	1.00
379_R	412_H	1.468	1.00
354_S	360_E	1.467	1.00
279_D	320_D	1.463	1.00
308_I	318_R	1.462	1.00
394_L	425_D	1.461	1.00
189_G	194_M	1.455	1.00
194_M	198_K	1.455	1.00
252_A	295_L	1.450	1.00
208_D	379_R	1.439	1.00
331_L	340_F	1.431	1.00
387_L	392_R	1.426	1.00
276_E	317_L	1.414	1.00
366_I	369_A	1.413	1.00
368_L	372_F	1.413	1.00
272_S	276_E	1.409	1.00
198_K	201_I	1.407	1.00
471_A	486_L	1.404	1.00
423_S	428_I	1.393	1.00
289_G	327_T	1.387	1.00
386_V	422_R	1.377	1.00
373_C	387_L	1.376	1.00
470_Q	474_Q	1.374	1.00
469_R	473_A	1.372	1.00
245_A	290_E	1.371	1.00
259_H	264_F	1.365	1.00
237_N	280_N	1.363	1.00
481_A	485_M	1.363	1.00
90_A	103_P	1.362	1.00
471_A	485_M	1.358	1.00
189_G	198_K	1.358	1.00
480_A	484_R	1.356	1.00
376_C	411_I	1.351	1.00
424_G	427_V	1.350	1.00
456_L	459_A	1.339	1.00
376_C	415_V	1.338	1.00
398_Y	406_E	1.312	1.00
489_D	492_N	1.311	1.00
385_V	421_T	1.310	1.00
306_G	318_R	1.296	1.00
204_V	351_F	1.285	1.00
460_T	463_F	1.282	1.00
197_L	355_V	1.281	1.00
81_R	110_V	1.279	1.00
373_C	415_V	1.275	1.00
290_E	328_N	1.273	1.00
212_L	325_A	1.261	1.00
187_M	223_L	1.261	1.00
196_Q	199_K	1.258	1.00
209_L	380_Q	1.255	1.00
310_R	313_D	1.255	1.00
57_D	69_A	1.253	1.00
47_D	53_P	1.252	1.00
336_L	342_A	1.251	1.00
491_A	494_H	1.250	1.00
393_N	397_H	1.248	1.00
216_E	357_P	1.243	1.00
188_I	371_Y	1.243	1.00
111_H	114_V	1.240	1.00
117_P	152_L	1.239	1.00
197_L	224_V	1.234	1.00
94_L	98_Y	1.234	1.00
492_N	496_L	1.232	1.00
478_N	481_A	1.225	1.00
418_A	427_V	1.224	1.00
263_A	311_V	1.218	1.00
467_T	486_L	1.215	1.00
261_K	269_S	1.212	1.00
489_D	495_R	1.210	1.00
471_A	482_C	1.207	1.00
332_R	336_L	1.205	1.00
459_A	463_F	1.205	1.00
57_D	61_K	1.203	1.00
377_R	385_V	1.203	1.00
213_I	324_L	1.198	1.00
495_R	499_R	1.197	1.00
208_D	234_R	1.197	1.00
429_L	432_Q	1.195	1.00
42_A	68_F	1.189	1.00
261_K	268_I	1.184	1.00
372_F	408_E	1.183	1.00
206_A	233_P	1.182	1.00
468_I	493_L	1.176	1.00
478_N	490_V	1.175	1.00
80_A	107_S	1.175	1.00
68_F	79_I	1.167	1.00
239_L	281_G	1.166	1.00
482_C	485_M	1.165	1.00
463_F	467_T	1.164	1.00
70_L	79_I	1.162	1.00
200_E	417_L	1.153	1.00
213_I	224_V	1.151	1.00
254_S	259_H	1.147	1.00
372_F	411_I	1.146	1.00
77_E	106_E	1.144	1.00
226_K	241_Y	1.141	1.00
243_N	290_E	1.140	1.00
387_L	423_S	1.140	1.00
88_F	107_S	1.138	1.00
479_W	494_H	1.122	1.00
187_M	224_V	1.119	1.00
209_L	350_V	1.117	1.00
254_S	264_F	1.113	1.00
249_E	292_S	1.109	1.00
63_V	150_A	1.109	1.00
372_F	376_C	1.107	1.00
275_F	321_V	1.106	1.00
90_A	118_L	1.106	1.00
106_E	109_K	1.102	1.00
259_H	263_A	1.099	1.00
365_V	369_A	1.093	1.00
350_V	409_H	1.092	1.00
227_A	231_A	1.089	1.00
79_I	85_V	1.088	1.00
472_L	482_C	1.087	1.00
104_G	116_L	1.084	1.00
73_H	103_P	1.082	1.00
480_A	490_V	1.081	1.00
388_S	422_R	1.081	1.00
283_L	323_V	1.077	1.00
362_G	396_Q	1.070	1.00
363_D	396_Q	1.061	1.00
414_A	418_A	1.061	1.00
201_I	227_A	1.059	1.00
259_H	311_V	1.058	1.00
279_D	321_V	1.058	1.00
89_P	153_A	1.058	1.00
252_A	291_L	1.054	1.00
377_R	383_S	1.054	1.00
410_A	414_A	1.052	1.00
289_G	331_L	1.052	1.00
479_W	497_A	1.050	1.00
201_I	353_L	1.049	1.00
214_S	332_R	1.048	1.00
252_A	256_L	1.048	1.00
73_H	94_L	1.047	1.00
189_G	367_L	1.047	1.00
276_E	308_I	1.043	1.00
194_M	197_L	1.043	1.00
455_N	458_E	1.038	1.00
414_A	423_S	1.031	1.00
186_Q	230_E	1.031	1.00
125_I	130_L	1.030	1.00
187_M	198_K	1.026	1.00
413_R	417_L	1.026	1.00
370_G	374_E	1.024	1.00
310_R	317_L	1.022	1.00
385_V	415_V	1.022	1.00
277_M	314_D	1.022	1.00
131_D	135_P	1.017	1.00
456_L	460_T	1.013	1.00
162_L	165_Q	1.010	1.00
70_L	76_L	1.009	1.00
390_G	424_G	1.007	1.00
255_E	271_R	1.004	1.00
283_L	302_V	1.003	1.00
222_E	241_Y	1.002	1.00
47_D	94_L	1.000	1.00
332_R	431_A	0.991	1.00
323_V	348_L	0.988	1.00
198_K	224_V	0.987	1.00
106_E	110_V	0.987	1.00
208_D	233_P	0.985	1.00
264_F	267_A	0.980	1.00
77_E	98_Y	0.978	1.00
190_L	195_T	0.978	1.00
469_R	502_L	0.977	1.00
209_L	416_V	0.973	1.00
274_K	277_M	0.972	1.00
472_L	479_W	0.970	1.00
466_E	470_Q	0.969	1.00
479_W	491_A	0.968	1.00
197_L	201_I	0.966	1.00
374_E	378_L	0.962	1.00
127_A	140_V	0.961	1.00
472_L	497_A	0.959	1.00
59_L	146_L	0.959	1.00
429_L	433_H	0.953	1.00
210_N	306_G	0.953	1.00
73_H	77_E	0.950	1.00
468_I	486_L	0.940	1.00
259_H	270_N	0.937	1.00
192_P	196_Q	0.935	1.00
210_N	325_A	0.929	1.00
189_G	224_V	0.927	1.00
226_K	230_E	0.926	1.00
275_F	319_V	0.920	1.00
43_L	65_G	0.916	1.00
493_L	496_L	0.914	1.00
468_I	496_L	0.912	1.00
104_G	118_L	0.912	1.00
211_V	228_I	0.909	1.00
87_R	157_L	0.908	1.00
277_M	313_D	0.906	1.00
272_S	277_M	0.903	1.00
466_E	469_R	0.902	1.00
42_A	85_V	0.899	1.00
93_E	122_Q	0.897	1.00
272_S	314_D	0.895	1.00
65_G	154_A	0.884	1.00
459_A	462_A	0.884	1.00
382_L	385_V	0.884	1.00
240_V	277_M	0.884	1.00
89_P	149_I	0.882	1.00
460_T	467_T	0.882	1.00
47_D	52_I	0.879	1.00
241_Y	301_R	0.879	1.00
289_G	328_N	0.874	1.00
377_R	384_R	0.873	1.00
259_H	271_R	0.872	1.00
68_F	83_G	0.871	1.00
492_N	495_R	0.869	1.00
408_E	412_H	0.865	1.00
78_A	82_A	0.865	1.00
486_L	496_L	0.863	1.00
248_P	311_V	0.863	1.00
240_V	278_A	0.862	1.00
349_S	352_P	0.862	1.00
193_G	196_Q	0.861	1.00
72_G	96_D	0.861	1.00
455_N	487_E	0.860	1.00
216_E	219_T	0.860	1.00
369_A	414_A	0.858	1.00
45_R	67_R	0.853	1.00
63_V	154_A	0.852	1.00
101_L	132_G	0.850	1.00
154_A	158_S	0.850	1.00
187_M	194_M	0.850	1.00
90_A	94_L	0.848	1.00
490_V	494_H	0.847	1.00
349_S	413_R	0.847	1.00
308_I	317_L	0.846	1.00
282_T	324_L	0.845	1.00
473_A	477_H	0.844	1.00
184_Q	227_A	0.843	1.00
160_A	164_E	0.842	1.00
98_Y	102_I	0.841	1.00
382_L	415_V	0.839	1.00
243_N	291_L	0.838	1.00
131_D	134_Q	0.836	1.00
494_H	498_K	0.835	1.00
42_A	83_G	0.835	1.00
365_V	395_L	0.832	1.00
259_H	267_A	0.832	1.00
468_I	497_A	0.831	1.00
259_H	268_I	0.825	1.00
393_N	396_Q	0.823	1.00
270_N	310_R	0.823	1.00
376_C	408_E	0.822	1.00
357_P	360_E	0.821	1.00
78_A	81_R	0.818	1.00
92_S	127_A	0.818	1.00
88_F	114_V	0.816	1.00
470_Q	473_A	0.815	1.00
89_P	117_P	0.815	1.00
370_G	386_V	0.814	1.00
225_A	239_L	0.813	1.00
301_R	305_Y	0.812	1.00
195_T	199_K	0.811	1.00
193_G	360_E	0.811	1.00
204_V	211_V	0.809	1.00
203_I	427_V	0.808	1.00
201_I	228_I	0.807	1.00
387_L	391_A	0.802	1.00
475_N	481_A	0.798	1.00
242_L	283_L	0.798	1.00
234_R	237_N	0.797	1.00
376_C	412_H	0.793	1.00
291_L	295_L	0.793	1.00
462_A	466_E	0.791	1.00
369_A	392_R	0.789	1.00
213_I	355_V	0.789	1.00
489_D	494_H	0.783	1.00
194_M	224_V	0.783	1.00
189_G	201_I	0.782	1.00
493_L	497_A	0.781	1.00
92_S	118_L	0.780	1.00
70_L	73_H	0.777	1.00
195_T	198_K	0.775	1.00
376_C	380_Q	0.774	1.00
366_I	370_G	0.773	1.00
90_A	116_L	0.773	1.00
209_L	351_F	0.771	1.00
479_W	486_L	0.770	1.00
490_V	495_R	0.768	1.00
158_S	163_I	0.766	1.00
158_S	161_L	0.766	1.00
260_V	317_L	0.760	1.00
158_S	162_L	0.759	1.00
332_R	342_A	0.757	1.00
270_N	313_D	0.756	1.00
247_L	256_L	0.751	1.00
141_F	144_E	0.750	1.00
75_R	79_I	0.748	1.00
188_I	367_L	0.747	1.00
222_E	305_Y	0.747	1.00
46_Y	103_P	0.745	1.00
398_Y	432_Q	0.745	1.00
349_S	409_H	0.742	1.00
488_T	493_L	0.742	1.00
102_I	105_Q	0.739	1.00
459_A	467_T	0.739	1.00
332_R	345_F	0.737	1.00
74_P	78_A	0.735	1.00
345_F	349_S	0.735	1.00
496_L	500_L	0.734	1.00
406_E	431_A	0.733	1.00
189_G	227_A	0.733	1.00
105_Q	131_D	0.728	1.00
488_T	492_N	0.728	1.00
271_R	274_K	0.726	1.00
151_A	155_G	0.725	1.00
456_L	463_F	0.724	1.00
205_A	232_S	0.722	1.00
465_R	500_L	0.720	1.00
260_V	276_E	0.720	1.00
394_L	428_I	0.719	1.00
207_S	416_V	0.719	1.00
362_G	367_L	0.719	1.00
365_V	396_Q	0.719	1.00
486_L	492_N	0.718	1.00
107_S	116_L	0.716	1.00
73_H	96_D	0.714	1.00
270_N	315_R	0.711	1.00
72_G	94_L	0.710	1.00
289_G	329_R	0.709	1.00
196_Q	200_E	0.706	1.00
79_I	82_A	0.706	1.00
389_A	392_R	0.703	1.00
335_V	345_F	0.702	1.00
250_S	253_E	0.699	1.00
234_R	321_V	0.699	1.00
477_H	497_A	0.698	1.00
213_I	225_A	0.697	1.00
70_L	75_R	0.696	1.00
288_I	348_L	0.695	1.00
275_F	308_I	0.695	1.00
350_V	412_H	0.694	1.00
75_R	78_A	0.694	1.00
203_I	382_L	0.693	1.00
472_L	477_H	0.688	1.00
187_M	227_A	0.688	1.00
414_A	428_I	0.688	1.00
263_A	267_A	0.688	1.00
103_P	107_S	0.685	1.00
190_L	363_D	0.683	1.00
457_R	471_A	0.683	1.00
50_Q	53_P	0.681	1.00
461_E	465_R	0.678	1.00
458_E	466_E	0.677	1.00
413_R	416_V	0.677	1.00
458_E	462_A	0.677	1.00
77_E	103_P	0.676	1.00
289_G	340_F	0.672	1.00
86_V	160_A	0.671	1.00
280_N	321_V	0.669	1.00
351_F	416_V	0.669	1.00
79_I	83_G	0.668	1.00
146_L	150_A	0.666	1.00
332_R	335_V	0.664	1.00
200_E	351_F	0.663	0.99
494_H	497_A	0.662	0.99
291_L	299_L	0.660	0.99
261_K	270_N	0.659	0.99
265_T	326_A	0.658	0.99
306_G	321_V	0.656	0.99
46_Y	88_F	0.655	0.99
192_P	195_T	0.655	0.99
151_A	162_L	0.655	0.99
461_E	500_L	0.654	0.99
377_R	382_L	0.654	0.99
377_R	415_V	0.652	0.99
199_K	419_R	0.651	0.99
457_R	496_L	0.650	0.99
130_L	134_Q	0.650	0.99
198_K	227_A	0.650	0.99
201_I	231_A	0.648	0.99
197_L	200_E	0.648	0.99
206_A	232_S	0.648	0.99
468_I	500_L	0.648	0.99
65_G	150_A	0.647	0.99
223_L	227_A	0.646	0.99
289_G	326_A	0.644	0.99
375_Q	379_R	0.641	0.99
468_I	471_A	0.640	0.99
389_A	393_N	0.639	0.99
48_S	143_D	0.638	0.99
89_P	119_F	0.638	0.99
87_R	115_G	0.638	0.99
261_K	267_A	0.636	0.99
274_K	314_D	0.635	0.99
302_V	305_Y	0.630	0.99
203_I	417_L	0.629	0.99
120_A	143_D	0.627	0.99
388_S	425_D	0.626	0.99
91_D	94_L	0.624	0.99
140_V	143_D	0.624	0.99
119_F	122_Q	0.624	0.99
105_Q	109_K	0.623	0.99
208_D	320_D	0.621	0.99
265_T	328_N	0.621	0.99
45_R	57_D	0.621	0.99
497_A	502_L	0.621	0.99
351_F	417_L	0.621	0.99
242_L	274_K	0.619	0.99
486_L	493_L	0.619	0.99
376_C	379_R	0.617	0.99
243_N	246_A	0.616	0.99
274_K	316_C	0.616	0.99
44_L	85_V	0.616	0.99
329_R	339_R	0.616	0.99
184_Q	198_K	0.615	0.99
248_P	251_V	0.615	0.99
271_R	277_M	0.614	0.99
380_Q	415_V	0.613	0.99
91_D	143_D	0.612	0.99
340_F	344_L	0.611	0.99
279_D	317_L	0.610	0.99
344_L	348_L	0.609	0.99
140_V	148_L	0.608	0.99
479_W	493_L	0.607	0.99
373_C	411_I	0.607	0.99
284_F	324_L	0.607	0.99
76_L	103_P	0.606	0.99
479_W	490_V	0.605	0.99
313_D	316_C	0.604	0.99
479_W	488_T	0.604	0.99
248_P	253_E	0.604	0.99
270_N	317_L	0.603	0.99
354_S	357_P	0.602	0.99
193_G	197_L	0.601	0.99
491_A	498_K	0.601	0.99
208_D	380_Q	0.600	0.99
251_V	265_T	0.599	0.99
464_Q	468_I	0.598	0.99
200_E	203_I	0.598	0.99
369_A	373_C	0.597	0.99
43_L	60_A	0.596	0.99
108_L	115_G	0.596	0.99
414_A	427_V	0.596	0.99
227_A	230_E	0.596	0.99
199_K	203_I	0.594	0.99
394_L	397_H	0.594	0.99
410_A	428_I	0.594	0.99
98_Y	106_E	0.593	0.99
272_S	308_I	0.590	0.99
217_T	290_E	0.590	0.99
55_A	59_L	0.587	0.99
45_R	56_I	0.586	0.99
192_P	363_D	0.585	0.99
260_V	311_V	0.584	0.99
145_E	148_L	0.584	0.99
126_G	131_D	0.581	0.99
363_D	366_I	0.578	0.99
90_A	104_G	0.577	0.99
479_W	495_R	0.577	0.99
123_N	129_T	0.577	0.99
478_N	495_R	0.574	0.99
42_A	86_V	0.573	0.99
464_Q	500_L	0.573	0.99
60_A	153_A	0.573	0.99
219_T	223_L	0.571	0.99
155_G	158_S	0.570	0.98
205_A	231_A	0.570	0.98
102_I	106_E	0.570	0.98
186_Q	227_A	0.569	0.98
275_F	323_V	0.569	0.98
201_I	206_A	0.569	0.98
478_N	494_H	0.568	0.98
489_D	496_L	0.568	0.98
214_S	330_D	0.568	0.98
49_R	52_I	0.567	0.98
477_H	502_L	0.567	0.98
193_G	363_D	0.566	0.98
204_V	232_S	0.566	0.98
380_Q	416_V	0.564	0.98
306_G	319_V	0.563	0.98
362_G	397_H	0.563	0.98
456_L	467_T	0.563	0.98
478_N	482_C	0.560	0.98
367_L	370_G	0.560	0.98
59_L	150_A	0.560	0.98
495_R	498_K	0.559	0.98
212_L	327_T	0.558	0.98
292_S	295_L	0.558	0.98
198_K	202_E	0.556	0.98
458_E	463_F	0.556	0.98
480_A	483_A	0.554	0.98
125_I	129_T	0.554	0.98
214_S	327_T	0.553	0.98
247_L	252_A	0.551	0.98
462_A	465_R	0.550	0.98
134_Q	139_D	0.549	0.98
394_L	398_Y	0.549	0.98
197_L	204_V	0.549	0.98
140_V	144_E	0.546	0.98
332_R	352_P	0.543	0.98
293_L	297_A	0.541	0.98
56_I	119_F	0.540	0.98
467_T	482_C	0.539	0.98
80_A	114_V	0.539	0.98
457_R	460_T	0.538	0.98
488_T	496_L	0.538	0.98
460_T	496_L	0.537	0.98
226_K	305_Y	0.536	0.98
292_S	297_A	0.534	0.98
279_D	308_I	0.533	0.98
479_W	482_C	0.532	0.98
308_I	316_C	0.531	0.98
120_A	123_N	0.531	0.98
263_A	270_N	0.530	0.98
371_Y	374_E	0.530	0.98
80_A	88_F	0.530	0.98
94_L	100_G	0.529	0.98
419_R	427_V	0.529	0.98
48_S	91_D	0.528	0.98
461_E	464_Q	0.527	0.98
244_C	400_F	0.525	0.97
420_A	424_G	0.525	0.97
48_S	120_A	0.525	0.97
242_L	256_L	0.525	0.97
373_C	377_R	0.524	0.97
262_G	267_A	0.524	0.97
223_L	404_V	0.524	0.97
95_P	98_Y	0.523	0.97
212_L	289_G	0.523	0.97
272_S	310_R	0.522	0.97
244_C	409_H	0.522	0.97
395_L	410_A	0.522	0.97
456_L	486_L	0.521	0.97
391_A	414_A	0.520	0.97
48_S	121_G	0.520	0.97
163_I	166_L	0.518	0.97
467_T	489_D	0.518	0.97
115_G	159_N	0.518	0.97
152_L	156_A	0.515	0.97
252_A	298_K	0.515	0.97
90_A	107_S	0.515	0.97
295_L	298_K	0.515	0.97
411_I	414_A	0.514	0.97
415_V	418_A	0.513	0.97
343_D	347_R	0.512	0.97
237_N	279_D	0.512	0.97
56_I	149_I	0.511	0.97
184_Q	202_E	0.511	0.97
454_Q	457_R	0.511	0.97
279_D	318_R	0.511	0.97
468_I	482_C	0.509	0.97
384_R	415_V	0.508	0.97
260_V	263_A	0.508	0.97
463_F	486_L	0.507	0.97
471_A	489_D	0.507	0.97
52_I	494_H	0.507	0.97
210_N	350_V	0.507	0.97
487_E	490_V	0.506	0.97
490_V	493_L	0.506	0.97
467_T	470_Q	0.505	0.97
123_N	142_S	0.505	0.97
138_F	152_L	0.505	0.97
255_E	274_K	0.504	0.97
251_V	254_S	0.504	0.97
155_G	162_L	0.502	0.97
460_T	486_L	0.502	0.97
50_Q	54_L	0.502	0.97
46_Y	94_L	0.501	0.97
115_G	163_I	0.501	0.97
76_L	88_F	0.501	0.97
70_L	85_V	0.500	0.97

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4l4uA	2	0.7679	100	0.164	Contact Map
3dzdA	2	0.7282	100	0.343	Contact Map
1ojlA	3	0.5972	100	0.444	Contact Map
4fwgA	3	0.6091	100	0.623	Contact Map
4qhsA	3	0.4841	100	0.659	Contact Map
4qosA	1	0.4762	100	0.663	Contact Map
1r6bX	1	0.8492	100	0.68	Contact Map
1qvrA	3	0.8413	100	0.691	Contact Map
3pxiA	3	0.7897	100	0.698	Contact Map
4ciuA	1	0.8194	100	0.7	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0121 seconds.