GREMLIN Database
CCMF - Cytochrome c-type biogenesis protein CcmF
UniProt: P33927 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG12054
Length: 647 (631)
Sequences: 1446 (953)
Seq/√Len: 38.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
184_F256_G6.8661.00
64_N84_R5.9951.00
58_V88_T5.3141.00
62_V85_V5.0111.00
531_R549_G4.9241.00
81_V85_V4.5791.00
77_T157_E4.5471.00
51_A101_L4.3701.00
224_V617_G4.2721.00
70_Y91_A4.1981.00
529_T551_T4.0891.00
515_M519_D4.0521.00
16_I45_L3.9361.00
233_E576_E3.9121.00
138_L142_F3.8471.00
545_V563_E3.7671.00
62_V81_V3.6621.00
255_V283_A3.6131.00
59_N63_V3.4871.00
184_F283_A3.3991.00
16_I49_S3.3421.00
328_L332_A3.3021.00
21_S131_M3.2741.00
503_F609_F3.2421.00
135_G318_F3.1611.00
351_L412_V3.0921.00
581_G611_R3.0591.00
482_F629_F3.0521.00
562_A578_A3.0071.00
403_A498_I2.9211.00
83_Y168_P2.8781.00
496_V619_M2.8541.00
20_L46_L2.8331.00
560_L578_A2.8181.00
463_A499_V2.7581.00
47_F105_G2.7471.00
548_I602_V2.7431.00
50_V104_S2.7341.00
3_P60_A2.7021.00
54_F88_T2.6751.00
250_F399_M2.6591.00
221_L621_A2.6551.00
223_I249_S2.5951.00
255_V363_M2.5581.00
45_L49_S2.4781.00
522_D525_E2.4621.00
25_L127_A2.4381.00
548_I589_A2.4241.00
54_F58_V2.4241.00
79_L87_A2.4141.00
74_N91_A2.3921.00
517_S530_F2.3521.00
522_D527_R2.3261.00
8_G12_L2.2991.00
536_V545_V2.2991.00
524_H606_Y2.2851.00
547_T559_V2.2690.99
72_A150_T2.2520.99
500_G616_G2.2080.99
5_I52_G2.2020.99
543_G563_E2.1900.99
20_L130_G2.1870.99
377_K383_S2.1680.99
318_F322_V2.1640.99
54_F101_L2.1580.99
69_T73_S2.1450.99
515_M520_S2.1450.99
528_F548_I2.1400.99
437_S457_A2.1150.99
580_D585_R2.1090.99
47_F108_F2.0960.99
60_A63_V2.0900.99
551_T554_G2.0860.99
50_V137_L2.0230.99
262_S356_N1.9720.99
86_A170_L1.9660.99
407_G465_L1.9640.98
504_S508_S1.9600.98
61_F70_Y1.9480.98
520_S529_T1.9400.98
497_T501_I1.9390.98
129_M185_S1.9220.98
520_S527_R1.9180.98
460_C464_V1.9030.98
20_L107_T1.8930.98
168_P172_F1.8750.98
463_A492_L1.8700.98
66_F77_T1.8530.98
547_T561_Y1.8430.98
13_A137_L1.8300.98
256_G283_A1.8130.97
486_G623_G1.8090.97
44_W111_A1.8080.97
433_T437_S1.8070.97
58_V62_V1.7930.97
176_L221_L1.7920.97
58_V85_V1.7830.97
289_L371_L1.7520.97
3_P68_V1.7460.97
551_T556_P1.7380.97
79_L91_A1.7280.97
291_T315_I1.7270.97
47_F51_A1.7200.96
362_A395_F1.7120.96
536_V543_G1.6660.96
530_F533_V1.6610.96
128_I192_I1.6600.96
17_A46_L1.6570.96
217_I624_G1.6500.96
550_V587_L1.6490.95
583_I615_A1.6390.95
508_S607_K1.6240.95
534_K547_T1.6200.95
403_A406_L1.6150.95
529_T549_G1.6130.95
176_L225_L1.6130.95
413_R417_D1.6120.95
376_H384_I1.6120.95
304_A307_S1.6110.95
151_L154_F1.6080.95
527_R554_G1.5930.95
157_E569_T1.5910.95
14_L138_L1.5830.94
406_L494_L1.5830.94
2_M56_V1.5830.94
129_M189_A1.5700.94
127_A131_M1.5530.94
564_K575_T1.5430.94
230_A302_V1.5420.94
44_W108_F1.5420.94
61_F75_S1.5410.94
18_L134_V1.5220.93
178_Y182_V1.5220.93
289_L367_L1.5030.93
76_N79_L1.4990.93
138_L314_F1.4960.92
365_V394_M1.4880.92
192_I329_L1.4850.92
332_A335_H1.4840.92
251_M363_M1.4810.92
552_R555_K1.4780.92
28_V36_M1.4570.91
274_A330_F1.4550.91
489_A626_L1.4540.91
397_W401_P1.4540.91
60_A68_V1.4530.91
14_L134_V1.4490.91
213_L260_M1.4410.91
589_A604_L1.4370.91
466_A495_A1.4280.91
556_P559_V1.4170.90
432_S464_V1.4040.90
70_Y79_L1.4040.90
181_Y294_V1.4010.90
110_V190_F1.3920.89
46_L133_S1.3900.89
482_F626_L1.3810.89
531_R547_T1.3780.89
69_T148_S1.3710.89
228_A612_W1.3640.88
513_V602_V1.3620.88
20_L42_F1.3620.88
233_E574_M1.3600.88
104_S137_L1.3570.88
534_K545_V1.3560.88
317_A321_L1.3540.88
541_W563_E1.3470.88
500_G613_I1.3440.88
50_V100_V1.3400.88
28_V124_R1.3400.88
423_R427_I1.3390.87
469_E473_R1.3320.87
8_G11_C1.3260.87
595_L598_G1.3220.87
82_W171_I1.3220.87
18_L436_L1.3140.86
120_D197_S1.3040.86
582_G585_R1.2810.85
17_A20_L1.2800.85
503_F507_Y1.2770.85
566_Y573_M1.2680.84
307_S310_A1.2660.84
75_S84_R1.2660.84
160_D570_A1.2650.84
515_M521_V1.2630.84
214_A628_L1.2620.84
528_F604_L1.2600.84
214_A283_A1.2560.84
275_W356_N1.2510.84
266_T276_T1.2490.84
78_Q157_E1.2460.83
317_A320_V1.2320.83
433_T440_L1.2310.83
24_P39_S1.2220.82
40_R122_V1.2200.82
51_A105_G1.2140.82
393_T397_W1.2140.82
217_I221_L1.2110.82
259_L280_A1.2090.81
87_A171_I1.2070.81
128_I329_L1.2030.81
437_S453_V1.2020.81
428_I432_S1.2000.81
560_L589_A1.1940.81
19_L38_S1.1930.81
372_L376_H1.1930.81
514_R599_A1.1840.80
216_W257_T1.1810.80
78_Q568_N1.1750.80
434_L437_S1.1700.79
528_F550_V1.1690.79
255_V286_L1.1650.79
417_D421_K1.1550.78
96_L140_I1.1500.78
489_A622_L1.1500.78
463_A495_A1.1390.77
220_T620_M1.1350.77
262_S276_T1.1340.77
549_G556_P1.1320.77
213_L627_C1.1280.77
39_S123_A1.1270.77
496_V615_A1.1240.76
618_L622_L1.1220.76
459_A495_A1.1210.76
299_L500_G1.1180.76
528_F589_A1.1150.76
167_D232_Y1.1060.75
549_G559_V1.1020.75
98_L179_M1.1020.75
64_N70_Y1.0950.75
75_S93_E1.0950.75
74_N93_E1.0910.74
9_L52_G1.0900.74
4_E149_R1.0900.74
359_L402_F1.0880.74
82_W172_F1.0880.74
32_D35_M1.0840.74
283_A286_L1.0840.74
630_D633_Y1.0810.74
262_S275_W1.0780.73
493_G620_M1.0780.73
354_A405_L1.0730.73
228_A586_D1.0720.73
272_F353_L1.0670.73
227_S241_F1.0660.72
532_D546_A1.0650.72
212_T260_M1.0640.72
527_R553_D1.0590.72
464_V467_I1.0570.72
467_I471_A1.0490.71
565_R576_E1.0360.70
60_A71_V1.0330.70
19_L35_M1.0310.70
91_A170_L1.0270.70
79_L160_D1.0250.69
585_R606_Y1.0250.69
440_L456_L1.0230.69
434_L439_L1.0220.69
44_W112_I1.0210.69
515_M602_V1.0160.69
436_L460_C1.0150.69
567_Y572_S1.0130.69
132_V284_F1.0130.69
517_S532_D1.0120.68
532_D547_T1.0100.68
217_I625_L1.0060.68
27_G36_M1.0050.68
550_V557_E1.0050.68
459_A463_A1.0050.68
540_N565_R1.0040.68
510_E605_Y1.0030.68
239_W487_M1.0030.68
255_V282_S1.0020.68
557_E580_D1.0020.68
233_E563_E0.9960.67
469_E484_Y0.9900.67
55_L260_M0.9870.67
107_T129_M0.9860.66
61_F161_L0.9850.66
160_D590_A0.9840.66
502_A505_Q0.9780.66
227_S613_I0.9780.66
48_M52_G0.9760.66
487_M543_G0.9740.65
38_S42_F0.9730.65
521_V604_L0.9720.65
100_V321_L0.9690.65
480_T483_S0.9660.65
479_K483_S0.9650.65
285_S323_I0.9570.64
277_L593_E0.9520.64
143_T575_T0.9500.64
68_V72_A0.9460.63
74_N90_G0.9440.63
591_L602_V0.9430.63
183_G215_A0.9360.62
22_V26_W0.9300.62
9_L49_S0.9280.62
125_V190_F0.9260.62
98_L293_L0.9250.61
462_I465_L0.9170.61
365_V494_L0.9170.61
458_M461_W0.9130.60
437_S441_P0.9090.60
369_G390_F0.9050.60
484_Y488_V0.9050.60
365_V378_Q0.9000.59
345_L350_S0.8990.59
489_A509_V0.8980.59
546_A591_L0.8970.59
523_I604_L0.8970.59
523_I528_F0.8950.59
269_R349_E0.8950.59
591_L599_A0.8930.59
315_I319_M0.8920.59
381_L391_F0.8900.58
108_F112_I0.8870.58
323_I326_S0.8860.58
372_L377_K0.8850.58
332_A590_A0.8810.58
18_L148_S0.8810.58
55_L59_N0.8740.57
412_V417_D0.8740.57
226_G229_W0.8730.57
144_S227_S0.8720.57
16_I42_F0.8690.57
441_P507_Y0.8680.57
61_F71_V0.8680.57
2_M59_N0.8670.56
174_P305_F0.8660.56
550_V560_L0.8660.56
14_L18_L0.8610.56
198_G632_R0.8600.56
173_H303_H0.8590.56
19_L42_F0.8590.56
346_W351_L0.8580.56
14_L137_L0.8580.56
286_L627_C0.8550.55
372_L397_W0.8510.55
106_W183_G0.8510.55
551_T557_E0.8510.55
564_K573_M0.8510.55
630_D634_R0.8500.55
86_A130_G0.8480.55
247_N370_T0.8480.55
354_A358_L0.8470.55
486_G627_C0.8470.55
170_L232_Y0.8460.55
591_L600_W0.8460.55
70_Y76_N0.8450.54
224_V504_S0.8450.54
485_W488_V0.8430.54
471_A474_I0.8410.54
232_Y294_V0.8410.54
164_L310_A0.8400.54
466_A488_V0.8380.54
26_W35_M0.8370.54
281_I285_S0.8350.54
179_M218_F0.8350.54
230_A241_F0.8340.54
364_L388_E0.8340.54
226_G303_H0.8320.53
229_W303_H0.8320.53
36_M119_L0.8310.53
590_A607_K0.8300.53
86_A96_L0.8300.53
428_I467_I0.8290.53
43_A46_L0.8270.53
9_L56_V0.8270.53
269_R356_N0.8270.53
78_Q591_L0.8260.53
50_V443_L0.8210.52
92_H241_F0.8210.52
47_F101_L0.8200.52
57_L161_L0.8190.52
37_A363_M0.8190.52
66_F75_S0.8170.52
11_C15_G0.8170.52
199_R501_I0.8160.52
529_T547_T0.8160.52
513_V521_V0.8150.52
165_L303_H0.8150.52
35_M127_A0.8130.52
365_V390_F0.8120.52
474_I478_T0.8110.51
43_A107_T0.8100.51
73_S159_R0.8080.51
61_F87_A0.8070.51
448_V452_T0.8060.51
526_Y550_V0.8050.51
404_L408_V0.8050.51
31_G51_A0.8030.51
537_T542_R0.8030.51
526_Y587_L0.8010.51
426_L443_L0.8010.51
461_W465_L0.8010.51
7_N11_C0.8000.50
251_M255_V0.8000.50
26_W30_R0.8000.50
552_R556_P0.7990.50
251_M283_A0.7980.50
61_F91_A0.7980.50
245_V303_H0.7970.50
535_E544_G0.7960.50
178_Y275_W0.7950.50
231_Y246_E0.7950.50
44_W48_M0.7940.50
169_G294_V0.7940.50
459_A499_V0.7930.50
436_L499_V0.7930.50
284_F290_G0.7900.50
174_P238_G0.7900.50
54_F91_A0.7900.50
55_L404_L0.7880.49
262_S355_N0.7880.49
232_Y577_A0.7850.49
72_A159_R0.7850.49
454_L571_G0.7840.49
516_K599_A0.7820.49
233_E241_F0.7780.49
234_L252_P0.7760.48
392_N399_M0.7750.48
96_L230_A0.7730.48
209_R267_E0.7730.48
304_A405_L0.7720.48
418_R421_K0.7720.48
440_L546_A0.7700.48
150_T154_F0.7700.48
60_A65_D0.7700.48
324_G499_V0.7700.48
394_M601_A0.7690.48
581_G587_L0.7680.48
330_F593_E0.7680.48
14_L141_L0.7670.48
504_S617_G0.7650.47
421_K425_L0.7650.47
372_L390_F0.7650.47
27_G39_S0.7640.47
178_Y540_N0.7640.47
87_A91_A0.7630.47
110_V125_V0.7630.47
404_L457_A0.7610.47
395_F399_M0.7590.47
124_R197_S0.7580.47
611_R617_G0.7580.47
552_R557_E0.7580.47
343_N415_G0.7560.47
223_I565_R0.7560.47
167_D241_F0.7540.46
527_R551_T0.7540.46
363_M438_L0.7520.46
58_V87_A0.7520.46
533_V600_W0.7510.46
215_A347_S0.7500.46
546_A602_V0.7490.46
67_T150_T0.7490.46
532_D559_V0.7490.46
102_L179_M0.7480.46
430_F433_T0.7470.46
104_S617_G0.7460.46
462_I495_A0.7460.46
70_Y74_N0.7420.45
441_P444_F0.7410.45
367_L371_L0.7400.45
484_Y487_M0.7370.45
139_F308_D0.7350.45
174_P303_H0.7350.45
174_P231_Y0.7350.45
107_T133_S0.7340.45
412_V422_I0.7340.45
542_R568_N0.7330.45
210_P349_E0.7330.45
250_F395_F0.7330.45
51_A328_L0.7330.45
377_K381_L0.7310.44
456_L460_C0.7300.44
367_L569_T0.7300.44
233_E567_Y0.7290.44
346_W422_I0.7280.44
150_T492_L0.7280.44
64_N75_S0.7270.44
466_A492_L0.7270.44
239_W505_Q0.7240.44
306_A312_G0.7230.44
420_R428_I0.7230.44
30_R37_A0.7220.44
463_A467_I0.7210.43
103_M178_Y0.7190.43
21_S127_A0.7190.43
233_E565_R0.7190.43
404_L454_L0.7180.43
81_V84_R0.7180.43
344_A492_L0.7170.43
7_N141_L0.7170.43
584_T587_L0.7160.43
307_S577_A0.7110.43
589_A625_L0.7110.43
62_V84_R0.7110.43
623_G627_C0.7100.42
376_H380_G0.7100.42
239_W501_I0.7090.42
493_G616_G0.7080.42
173_H226_G0.7080.42
173_H229_W0.7080.42
541_W565_R0.7070.42
429_A433_T0.7070.42
228_A611_R0.7060.42
107_T523_I0.7050.42
200_L277_L0.7040.42
558_T580_D0.7020.42
56_V104_S0.7020.42
340_R378_Q0.7010.42
96_L307_S0.7010.42
294_V546_A0.7010.42
419_P489_A0.7000.42
394_M397_W0.7000.42
438_L527_R0.6990.42
528_F587_L0.6990.42
317_A430_F0.6990.42
439_L479_K0.6970.41
165_L173_H0.6970.41
449_V452_T0.6970.41
400_V404_L0.6960.41
441_P446_S0.6950.41
281_I326_S0.6940.41
369_G386_I0.6910.41
9_L20_L0.6880.41
167_D294_V0.6840.40
64_N91_A0.6840.40
84_R166_Q0.6840.40
62_V404_L0.6830.40
181_Y290_G0.6830.40
417_D422_I0.6830.40
299_L304_A0.6820.40
320_V346_W0.6810.40
160_D169_G0.6810.40
523_I587_L0.6800.40
231_Y238_G0.6800.40
377_K380_G0.6790.40
354_A492_L0.6790.40
499_V528_F0.6780.40
80_P565_R0.6770.40
245_V305_F0.6770.40
98_L564_K0.6770.40
143_T307_S0.6770.40
382_G385_S0.6760.40
14_L85_V0.6760.40
51_A54_F0.6760.40
243_D261_H0.6750.39
243_D491_H0.6750.39
261_H491_H0.6750.39
25_L124_R0.6750.39
621_A625_L0.6740.39
20_L43_A0.6730.39
178_Y565_R0.6720.39
66_F72_A0.6720.39
328_L460_C0.6710.39
434_L467_I0.6710.39
426_L429_A0.6710.39
304_A523_I0.6710.39
151_L160_D0.6710.39
121_I125_V0.6700.39
390_F628_L0.6700.39
354_A420_R0.6690.39
304_A428_I0.6690.39
52_G63_V0.6690.39
169_G607_K0.6660.39
117_I207_F0.6660.39
429_A472_L0.6660.39
164_L574_M0.6640.39
346_W496_V0.6640.39
85_V492_L0.6640.39
49_S573_M0.6630.38
173_H245_V0.6620.38
320_V528_F0.6620.38
64_N76_N0.6620.38
298_V391_F0.6620.38
92_H144_S0.6610.38
84_R87_A0.6600.38
610_V613_I0.6590.38
93_E98_L0.6580.38
165_L229_W0.6570.38
165_L226_G0.6570.38
91_A171_I0.6570.38
257_T352_L0.6550.38
385_S389_P0.6550.38
165_L245_V0.6520.38
105_G478_T0.6510.37
19_L23_Y0.6510.37
273_K413_R0.6500.37
14_L26_W0.6490.37
140_I523_I0.6480.37
76_N91_A0.6480.37
217_I628_L0.6480.37
535_E542_R0.6470.37
239_W600_W0.6460.37
172_F467_I0.6460.37
529_T532_D0.6460.37
448_V453_V0.6450.37
427_I431_I0.6440.37
104_S431_I0.6440.37
33_A435_V0.6430.37
81_V157_E0.6430.37
172_F218_F0.6430.37
251_M367_L0.6430.37
192_I326_S0.6420.37
75_S92_H0.6420.37
231_Y236_W0.6420.37
224_V620_M0.6420.37
33_A119_L0.6400.37
174_P246_E0.6400.37
76_N82_W0.6390.36
278_L330_F0.6380.36
435_V450_A0.6380.36
79_L171_I0.6380.36
501_I573_M0.6380.36
530_F599_A0.6360.36
102_L282_S0.6360.36
189_A248_A0.6360.36
226_G245_V0.6350.36
229_W245_V0.6350.36
144_S294_V0.6340.36
212_T215_A0.6340.36
344_A416_R0.6330.36
26_W321_L0.6320.36
533_V546_A0.6320.36
182_V287_C0.6310.36
283_A403_A0.6310.36
183_G220_T0.6290.36
44_W492_L0.6290.36
16_I44_W0.6290.36
299_L374_L0.6280.36
508_S608_P0.6280.36
404_L552_R0.6280.36
307_S572_S0.6270.35
474_I550_V0.6270.35
424_N427_I0.6260.35
18_L21_S0.6260.35
22_V561_Y0.6260.35
232_Y579_I0.6260.35
262_S349_E0.6250.35
464_V468_A0.6240.35
497_T617_G0.6240.35
63_V610_V0.6240.35
384_I579_I0.6240.35
430_F457_A0.6230.35
438_L442_W0.6230.35
455_G460_C0.6230.35
456_L459_A0.6220.35
418_R442_W0.6220.35
227_S540_N0.6210.35
266_T272_F0.6210.35
267_E356_N0.6210.35
622_L626_L0.6200.35
553_D556_P0.6190.35
171_I574_M0.6190.35
55_L534_K0.6190.35
92_H311_R0.6180.35
155_P228_A0.6180.35
170_L250_F0.6180.35
23_Y127_A0.6180.35
168_P171_I0.6180.35
386_I390_F0.6170.35
408_V418_R0.6170.35
447_K452_T0.6170.35
513_V604_L0.6150.34
233_E564_K0.6150.34
497_T620_M0.6140.34
429_A438_L0.6140.34
351_L354_A0.6130.34
293_L315_I0.6120.34
250_F254_L0.6120.34
513_V626_L0.6100.34
204_Y208_T0.6090.34
281_I288_L0.6080.34
493_G619_M0.6080.34
82_W87_A0.6080.34
196_L333_R0.6070.34
105_G430_F0.6070.34
24_P127_A0.6070.34
102_L122_V0.6060.34
398_L604_L0.6060.34
452_T459_A0.6050.34
403_A458_M0.6050.34
86_A600_W0.6040.34
332_A430_F0.6040.34
375_V388_E0.6040.34
354_A408_V0.6030.34
354_A464_V0.6030.34
54_F98_L0.6030.34
504_S590_A0.6030.34
160_D607_K0.6000.33
383_S397_W0.6000.33
424_N428_I0.6000.33
170_L405_L0.6000.33
175_P225_L0.5990.33
23_Y38_S0.5980.33
127_A196_L0.5980.33
168_P289_L0.5980.33
166_Q540_N0.5980.33
139_F145_N0.5980.33
319_M391_F0.5970.33
508_S573_M0.5970.33
397_W609_F0.5950.33
56_V60_A0.5950.33
98_L102_L0.5950.33
91_A161_L0.5940.33
320_V499_V0.5940.33
431_I468_A0.5920.33
42_F100_V0.5910.33
288_L579_I0.5910.33
508_S617_G0.5900.32
61_F308_D0.5900.32
277_L415_G0.5890.32
39_S404_L0.5890.32
238_G246_E0.5880.32
174_P226_G0.5870.32
174_P229_W0.5870.32
546_A549_G0.5870.32
256_G365_V0.5860.32
376_H570_A0.5840.32
165_L174_P0.5840.32
346_W419_P0.5840.32
510_E546_A0.5830.32
431_I435_V0.5830.32
45_L217_I0.5830.32
124_R196_L0.5820.32
15_G619_M0.5820.32
58_V101_L0.5820.32
229_W243_D0.5820.32
229_W491_H0.5820.32
226_G243_D0.5820.32
229_W261_H0.5820.32
226_G261_H0.5820.32
226_G491_H0.5820.32
510_E603_R0.5810.32
86_A221_L0.5810.32
377_K390_F0.5800.32
64_N79_L0.5800.32
18_L375_V0.5800.32
278_L327_L0.5790.32
500_G610_V0.5780.32
376_H381_L0.5780.32
97_L291_T0.5770.31
275_W349_E0.5770.31
35_M400_V0.5770.31
195_L333_R0.5760.31
432_S436_L0.5760.31
267_E275_W0.5740.31
213_L504_S0.5730.31
2_M437_S0.5730.31
48_M344_A0.5730.31
205_A208_T0.5730.31
456_L559_V0.5720.31
95_S373_P0.5710.31
86_A136_F0.5710.31
41_L455_G0.5710.31
379_L382_G0.5710.31
41_L515_M0.5710.31
366_V588_Y0.5700.31
571_G582_G0.5700.31
438_L443_L0.5700.31
571_G613_I0.5690.31
266_T270_A0.5690.31
76_N171_I0.5690.31
74_N371_L0.5690.31
26_W468_A0.5690.31
179_M264_A0.5680.31
406_L498_I0.5680.31
18_L532_D0.5670.31
438_L444_F0.5670.31
189_A470_A0.5660.31
364_L431_I0.5660.31
48_M535_E0.5660.31
104_S107_T0.5660.31
463_A622_L0.5660.31
390_F394_M0.5650.31
241_F592_G0.5640.30
431_I434_L0.5630.30
59_N556_P0.5630.30
267_E349_E0.5620.30
90_G308_D0.5620.30
23_Y438_L0.5610.30
362_A399_M0.5610.30
493_G623_G0.5610.30
100_V133_S0.5600.30
104_S626_L0.5600.30
130_G134_V0.5590.30
277_L360_V0.5580.30
174_P245_V0.5570.30
158_G373_P0.5560.30
436_L442_W0.5560.30
338_R430_F0.5560.30
361_A385_S0.5560.30
64_N87_A0.5550.30
453_V458_M0.5550.30
365_V397_W0.5540.30
580_D583_I0.5530.30
346_W464_V0.5530.30
188_F284_F0.5520.30
461_W464_V0.5520.30
487_M600_W0.5510.30
78_Q338_R0.5510.30
17_A585_R0.5510.30
278_L353_L0.5510.30
46_L49_S0.5500.29
13_A20_L0.5500.29
550_V589_A0.5490.29
561_Y578_A0.5480.29
358_L402_F0.5480.29
499_V609_F0.5470.29
190_F204_Y0.5470.29
591_L618_L0.5470.29
92_H308_D0.5460.29
50_V101_L0.5460.29
372_L383_S0.5460.29
508_S611_R0.5460.29
456_L553_D0.5450.29
249_S304_A0.5440.29
434_L443_L0.5440.29
426_L439_L0.5430.29
582_G609_F0.5430.29
468_A472_L0.5420.29
121_I354_A0.5420.29
55_L321_L0.5420.29
279_L370_T0.5410.29
400_V433_T0.5410.29
167_D308_D0.5400.29
196_L334_G0.5400.29
81_V533_V0.5400.29
433_T508_S0.5390.29
423_R555_K0.5390.29
342_N390_F0.5390.29
456_L499_V0.5390.29
43_A111_A0.5380.29
502_A506_N0.5380.29
99_W252_P0.5380.29
407_G495_A0.5380.29
104_S133_S0.5370.28
466_A470_A0.5370.28
458_M462_I0.5370.28
69_T150_T0.5360.28
80_P178_Y0.5350.28
11_C553_D0.5340.28
188_F623_G0.5330.28
548_I561_Y0.5320.28
547_T553_D0.5320.28
41_L45_L0.5320.28
515_M601_A0.5310.28
55_L419_P0.5310.28
373_P588_Y0.5310.28
135_G314_F0.5310.28
354_A421_K0.5300.28
410_P610_V0.5300.28
439_L626_L0.5300.28
67_T149_R0.5290.28
392_N505_Q0.5290.28
64_N566_Y0.5290.28
18_L354_A0.5280.28
248_A591_L0.5280.28
2_M532_D0.5270.28
378_Q610_V0.5270.28
420_R424_N0.5270.28
110_V208_T0.5260.28
238_G305_F0.5260.28
569_T572_S0.5260.28
92_H294_V0.5260.28
70_Y96_L0.5260.28
103_M291_T0.5250.28
172_F485_W0.5250.28
391_F554_G0.5250.28
432_S454_L0.5250.28
459_A465_L0.5250.28
79_L106_W0.5240.28
18_L22_V0.5240.28
79_L82_W0.5240.28
496_V549_G0.5240.28
390_F501_I0.5240.28
250_F536_V0.5230.27
555_K558_T0.5230.27
456_L536_V0.5230.27
100_V571_G0.5230.27
19_L464_V0.5220.27
80_P166_Q0.5210.27
291_T319_M0.5210.27
92_H178_Y0.5210.27
469_E480_T0.5210.27
517_S544_G0.5210.27
240_W261_H0.5200.27
240_W491_H0.5200.27
240_W243_D0.5200.27
17_A622_L0.5200.27
297_G302_V0.5190.27
74_N92_H0.5190.27
299_L359_L0.5180.27
257_T286_L0.5170.27
71_V87_A0.5170.27
22_V332_A0.5170.27
85_V481_T0.5160.27
497_T613_I0.5160.27
197_S200_L0.5160.27
257_T407_G0.5150.27
521_V558_T0.5150.27
63_V442_W0.5150.27
281_I501_I0.5150.27
114_S122_V0.5140.27
180_G247_N0.5140.27
38_S41_L0.5130.27
558_T587_L0.5130.27
106_W160_D0.5130.27
436_L537_T0.5120.27
609_F613_I0.5120.27
140_I606_Y0.5110.27
135_G169_G0.5110.27
478_T531_R0.5100.27
352_L355_N0.5100.27
368_L384_I0.5100.27
67_T218_F0.5100.27
174_P297_G0.5090.26
293_L298_V0.5090.26
386_I389_P0.5080.26
47_F104_S0.5080.26
186_V608_P0.5080.26
413_R418_R0.5070.26
243_D303_H0.5070.26
303_H491_H0.5070.26
261_H303_H0.5070.26
18_L451_M0.5060.26
91_A266_T0.5060.26
85_V418_R0.5060.26
45_L48_M0.5060.26
234_L301_S0.5060.26
397_W562_A0.5050.26
106_W179_M0.5050.26
25_L131_M0.5050.26
145_N292_F0.5050.26
65_D93_E0.5030.26
285_S326_S0.5030.26
92_H232_Y0.5030.26
112_I456_L0.5020.26
174_P234_L0.5020.26
487_M501_I0.5010.26
53_A140_I0.5010.26
43_A470_A0.5010.26
44_W527_R0.5010.26
530_F548_I0.5000.26
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2cfqA 1 0.5951 51.8 0.981 Contact Map
1q16C 2 0.1947 15.5 0.985 Contact Map
3wdoA 1 0.6244 13.8 0.986 Contact Map
3cfuA 1 0.187 10.7 0.986 Contact Map
2mfrA 1 0.0881 7.2 0.987 Contact Map
4p6vD 1 0.2612 7.1 0.987 Contact Map
4knfA 3 0.0726 7.1 0.987 Contact Map
3mceA 2 0.0943 6.9 0.987 Contact Map
4xtlA 1 0.0989 6.9 0.987 Contact Map
3qbgA 3 0.0835 6.8 0.987 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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