GREMLIN Database
YEJO - Putative uncharacterized outer membrane protein YejO
UniProt: P33924 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG12051
Length: 863 (711)
Sequences: 1863 (1775)
Seq/√Len: 66.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
648_I672_G5.9201.00
765_I797_E5.7531.00
794_V819_T5.6531.00
838_H858_G5.6521.00
841_V853_W4.9091.00
684_Y724_G4.8031.00
796_Q819_T4.4831.00
650_G670_T4.3211.00
700_G752_L4.2791.00
768_A798_Y4.0061.00
499_I516_L3.8261.00
733_S775_S3.6301.00
742_G764_R3.6231.00
607_I627_G3.5821.00
734_V772_T3.5171.00
358_V361_R3.2901.00
824_Q842_S3.2641.00
603_W633_D3.2521.00
433_L439_N3.2021.00
691_V715_N3.1881.00
633_D674_Y3.1081.00
469_G473_F3.1011.00
737_Y769_E3.0981.00
519_T522_G2.9471.00
687_G721_V2.9301.00
649_F669_Y2.9191.00
835_L861_W2.8891.00
493_A519_T2.8531.00
603_W631_G2.8521.00
790_L825_A2.8391.00
791_K824_Q2.6951.00
739_A769_E2.6731.00
684_Y722_E2.6531.00
670_T692_D2.6361.00
275_Y279_D2.6091.00
696_N714_S2.5861.00
700_G756_M2.5571.00
766_L799_A2.5331.00
835_L859_V2.4721.00
609_T625_L2.4611.00
789_W826_G2.4401.00
688_V720_H2.4361.00
492_Q522_G2.4261.00
737_Y793_A2.4151.00
465_N491_G2.4091.00
611_N623_Q2.3921.00
643_T677_W2.3581.00
203_L207_G2.3511.00
786_L829_S2.3441.00
769_E793_A2.3081.00
258_G261_S2.2971.00
742_G766_L2.2851.00
726_R735_R2.2731.00
668_S694_F2.2511.00
490_T520_G2.2231.00
771_G793_A2.2071.00
413_W417_A2.2051.00
792_A823_Y2.1591.00
475_M516_L2.1401.00
676_G686_D2.1241.00
768_A794_V2.1141.00
279_D282_G2.0991.00
697_T711_D2.0931.00
714_S747_G2.0701.00
643_T675_A2.0541.00
735_R773_A2.0501.00
315_A319_Y2.0471.00
686_D739_A2.0071.00
720_H739_A1.9981.00
589_R686_D1.9981.00
427_L431_A1.9781.00
686_D720_H1.9761.00
515_T518_T1.9681.00
246_K249_V1.9661.00
752_L756_M1.9471.00
315_A318_V1.9471.00
636_F645_R1.9441.00
315_A320_D1.9341.00
786_L827_I1.9321.00
400_D404_A1.9291.00
402_S406_V1.9071.00
744_T764_R1.9031.00
249_V252_N1.8991.00
689_V719_A1.8821.00
683_A725_F1.8821.00
650_G672_G1.8811.00
433_L444_D1.8631.00
672_G690_K1.8611.00
273_K277_L1.8521.00
700_G754_N1.8471.00
464_T489_V1.8281.00
455_S458_N1.8211.00
433_L436_S1.8021.00
415_I419_I1.7831.00
286_M291_A1.7801.00
450_S453_T1.7661.00
475_M499_I1.7631.00
444_D451_S1.7561.00
607_I652_S1.7471.00
651_Y669_Y1.7421.00
256_V261_S1.7301.00
685_V721_V1.7271.00
732_W776_Y1.7060.99
416_I419_I1.7050.99
473_F497_F1.6970.99
327_N331_T1.6930.99
150_K154_L1.6900.99
387_V393_F1.6850.99
722_E739_A1.6800.99
656_I666_I1.6770.99
495_G552_W1.6770.99
646_G674_Y1.6750.99
352_A356_V1.6710.99
431_A449_R1.6700.99
603_W674_Y1.6590.99
459_F485_D1.6590.99
627_G650_G1.6550.99
151_G154_L1.6520.99
175_T178_R1.6500.99
298_K302_M1.6480.99
768_A819_T1.6390.99
608_N626_T1.6310.99
740_F766_L1.6300.99
271_V276_E1.6260.99
428_L431_A1.6180.99
381_L384_K1.6130.99
148_I156_V1.6010.99
455_S460_I1.5810.99
767_R797_E1.5790.99
458_N478_D1.5790.99
691_V717_A1.5780.99
647_L673_A1.5750.99
145_F148_I1.5720.99
467_L497_F1.5640.99
516_L544_L1.5350.99
492_Q521_G1.5350.99
499_I517_V1.5330.99
694_F714_S1.5320.99
604_S628_L1.5290.99
271_V275_Y1.5230.99
350_V353_G1.5200.99
478_D485_D1.5190.99
623_Q656_I1.5190.99
443_M446_P1.5160.99
769_E795_R1.5040.99
358_V362_G1.5000.99
348_A354_T1.4750.99
200_N207_G1.4660.98
275_Y282_G1.4650.98
158_E162_A1.4650.98
206_G209_L1.4630.98
684_Y739_A1.4590.98
467_L473_F1.4580.98
601_A860_V1.4560.98
463_T490_T1.4550.98
750_Y758_A1.4540.98
203_L209_L1.4480.98
686_D724_G1.4420.98
526_F554_L1.4400.98
435_M462_L1.4390.98
694_F716_G1.4370.98
568_V750_Y1.4320.98
823_Y845_N1.4300.98
824_Q840_S1.4160.98
710_G750_Y1.4100.98
545_L555_A1.4040.98
413_W416_I1.4030.98
156_V160_G1.4020.98
473_F477_T1.4010.98
302_M305_L1.4000.98
467_L489_V1.3990.98
653_H667_D1.3870.98
724_G769_E1.3860.98
222_V228_L1.3840.98
591_G605_S1.3840.98
696_N712_Y1.3840.98
348_A352_A1.3840.98
349_N352_A1.3810.98
404_A408_L1.3780.98
491_G521_G1.3610.97
404_A423_N1.3500.97
604_S630_L1.3490.97
365_G369_V1.3480.97
518_T551_S1.3450.97
605_S629_T1.3430.97
469_G497_F1.3360.97
466_T491_G1.3300.97
423_N426_T1.3260.97
795_R822_V1.3230.97
211_V256_V1.3210.97
325_Y328_G1.3160.97
684_Y769_E1.3110.97
286_M290_Q1.3070.97
690_K718_G1.3050.97
406_V423_N1.3050.97
586_V676_G1.3010.97
708_A755_G1.3000.97
513_S555_A1.2980.97
843_Y853_W1.2940.97
610_R624_T1.2880.96
613_V621_F1.2850.96
254_L261_S1.2830.96
493_A525_A1.2820.96
288_D291_A1.2810.96
515_T551_S1.2780.96
686_D769_E1.2780.96
668_S692_D1.2730.96
353_G356_V1.2660.96
461_T486_Q1.2650.96
488_N520_G1.2650.96
713_N859_V1.2640.96
446_P467_L1.2630.96
770_A794_V1.2620.96
300_A304_S1.2590.96
159_G162_A1.2580.96
756_M812_F1.2580.96
328_G333_S1.2560.96
339_E343_I1.2550.96
385_V393_F1.2550.96
589_R633_D1.2540.96
416_I421_T1.2490.96
326_Q332_Y1.2490.96
433_L460_I1.2490.96
692_D716_G1.2460.96
842_S854_N1.2460.96
602_M632_I1.2380.96
408_L413_W1.2340.95
575_Q579_F1.2320.95
739_A793_A1.2320.95
238_G241_K1.2320.95
838_H860_V1.2300.95
566_T571_M1.2290.95
767_R795_R1.2280.95
411_S415_I1.2270.95
473_F476_R1.2210.95
687_G723_S1.2190.95
153_L157_K1.2180.95
589_R674_Y1.2120.95
738_L770_A1.2100.95
720_H741_T1.2070.95
267_I270_G1.2050.95
326_Q330_I1.2040.95
479_M556_E1.1990.95
179_A207_G1.1980.95
623_Q654_S1.1930.95
526_F544_L1.1930.95
684_Y737_Y1.1920.95
579_F743_F1.1890.94
666_I712_Y1.1830.94
284_I288_D1.1820.94
278_D282_G1.1810.94
275_Y280_G1.1740.94
201_M204_E1.1650.94
662_G712_Y1.1640.94
334_S338_S1.1620.94
650_G692_D1.1610.94
199_N203_L1.1610.94
460_I476_R1.1590.94
415_I418_D1.1560.94
508_P511_G1.1540.94
275_Y286_M1.1490.93
565_T568_V1.1460.93
565_T576_P1.1460.93
637_S641_S1.1440.93
463_T488_N1.1230.93
313_V319_Y1.1220.93
328_G332_Y1.1190.92
747_G761_G1.1190.92
201_M206_G1.1150.92
712_Y747_G1.1120.92
348_A353_G1.1120.92
164_A180_M1.1110.92
218_Y222_V1.1080.92
350_V354_T1.1040.92
768_A796_Q1.1010.92
453_T460_I1.1000.92
182_V187_R1.0990.92
271_V274_N1.0980.92
766_L797_E1.0970.92
173_I209_L1.0950.92
699_H709_F1.0950.92
666_I696_N1.0930.92
466_T492_Q1.0920.91
254_L258_G1.0910.91
446_P450_S1.0900.91
585_T589_R1.0900.91
793_A822_V1.0880.91
749_D761_G1.0840.91
379_A383_G1.0820.91
664_G698_I1.0820.91
381_L387_V1.0810.91
648_I690_K1.0780.91
328_G334_S1.0780.91
320_D323_R1.0640.90
605_S676_G1.0640.90
358_V378_P1.0620.90
788_P827_I1.0610.90
741_T769_E1.0610.90
350_V355_M1.0610.90
150_K158_E1.0580.90
401_T404_A1.0560.90
204_E207_G1.0550.90
645_R673_A1.0520.90
688_V791_K1.0490.90
828_R838_H1.0440.90
453_T459_F1.0370.89
565_T569_L1.0280.89
605_S739_A1.0280.89
295_I298_K1.0270.89
316_N319_Y1.0190.88
684_Y720_H1.0190.88
589_R603_W1.0150.88
228_L236_V1.0150.88
363_N369_V1.0130.88
365_G383_G1.0120.88
844_G852_P1.0100.88
477_T514_L1.0090.88
720_H769_E1.0090.88
776_Y788_P1.0050.88
710_G752_L1.0030.88
535_V538_G1.0020.88
431_A527_T1.0010.87
313_V320_D1.0000.87
602_M651_Y0.9980.87
664_G696_N0.9940.87
702_M708_A0.9930.87
213_E324_S0.9920.87
390_G393_F0.9890.87
334_S337_I0.9880.87
535_V542_Y0.9880.87
684_Y735_R0.9880.87
167_Q173_I0.9870.87
489_V493_A0.9870.87
455_S459_F0.9860.87
330_I333_S0.9860.87
253_A256_V0.9850.87
468_S494_T0.9840.87
413_W433_L0.9810.86
362_G365_G0.9810.86
755_G846_G0.9790.86
770_A793_A0.9790.86
727_W825_A0.9790.86
311_T315_A0.9790.86
310_G313_V0.9770.86
282_G286_M0.9750.86
742_G799_A0.9710.86
752_L760_V0.9710.86
855_T861_W0.9690.86
591_G722_E0.9690.86
622_E657_G0.9670.86
780_L786_L0.9620.85
184_G187_R0.9620.85
601_A633_D0.9610.85
737_Y791_K0.9590.85
547_N551_S0.9590.85
346_G349_N0.9580.85
697_T863_F0.9580.85
737_Y771_G0.9570.85
479_M503_D0.9560.85
444_D447_V0.9490.85
462_L544_L0.9490.85
751_T757_R0.9480.84
165_V168_K0.9480.84
683_A687_G0.9460.84
368_E372_P0.9460.84
802_N814_N0.9440.84
427_L449_R0.9430.84
208_S211_V0.9410.84
308_D319_Y0.9400.84
343_I346_G0.9390.84
415_I439_N0.9390.84
343_I350_V0.9380.84
740_F768_A0.9380.84
671_L691_V0.9380.84
647_L786_L0.9380.84
576_P579_F0.9360.84
633_D646_G0.9350.84
652_S670_T0.9350.84
341_M346_G0.9350.84
471_G475_M0.9340.84
571_M664_G0.9310.83
415_I433_L0.9310.83
326_Q335_K0.9300.83
797_E820_S0.9300.83
789_W828_R0.9290.83
737_Y752_L0.9280.83
444_D464_T0.9270.83
689_V717_A0.9260.83
589_R676_G0.9240.83
606_A626_T0.9240.83
236_V240_D0.9240.83
501_V516_L0.9210.83
311_T314_Q0.9210.83
294_T302_M0.9200.83
314_Q318_V0.9160.82
700_G812_F0.9150.82
633_D676_G0.9130.82
684_Y688_V0.9120.82
827_I839_L0.9100.82
152_G171_G0.9080.82
182_V189_G0.9080.82
258_G262_K0.9070.82
560_Q563_P0.9070.82
787_E790_L0.9060.82
439_N460_I0.9050.82
528_L544_L0.9020.81
200_N203_L0.9000.81
459_F476_R0.8960.81
662_G684_Y0.8950.81
348_A351_W0.8940.81
332_Y358_V0.8900.81
570_N588_E0.8900.81
313_V333_S0.8900.81
466_T673_A0.8890.80
164_A182_V0.8880.80
539_T542_Y0.8880.80
360_V363_N0.8880.80
651_Y693_R0.8870.80
688_V739_A0.8870.80
465_N521_G0.8860.80
369_V393_F0.8860.80
734_V774_V0.8860.80
433_L441_I0.8850.80
542_Y556_E0.8830.80
586_V591_G0.8830.80
676_G722_E0.8830.80
313_V316_N0.8820.80
724_G796_Q0.8810.80
572_A863_F0.8810.80
489_V492_Q0.8800.80
298_K301_T0.8790.80
688_V735_R0.8790.80
651_Y667_D0.8780.80
425_N430_L0.8770.80
662_G724_G0.8760.79
360_V374_I0.8750.79
563_P566_T0.8720.79
391_A397_G0.8720.79
145_F163_F0.8720.79
538_G542_Y0.8720.79
333_S338_S0.8720.79
749_D760_V0.8710.79
565_T585_T0.8700.79
718_G743_F0.8690.79
565_T582_E0.8670.79
433_L459_F0.8670.79
272_S275_Y0.8650.79
621_F656_I0.8630.78
722_E735_R0.8610.78
156_V167_Q0.8600.78
385_V402_S0.8590.78
656_I664_G0.8580.78
700_G710_G0.8580.78
716_G720_H0.8560.78
612_N711_D0.8560.78
488_N518_T0.8540.78
645_R675_A0.8540.78
217_A220_T0.8540.78
485_D495_G0.8530.78
493_A524_A0.8520.78
765_I799_A0.8500.77
769_E822_V0.8500.77
210_R229_E0.8480.77
193_I196_G0.8470.77
511_G525_A0.8460.77
741_T767_R0.8460.77
387_V390_G0.8440.77
769_E789_W0.8430.77
702_M756_M0.8420.77
175_T180_M0.8420.77
789_W824_Q0.8420.77
713_N748_Q0.8410.77
409_E412_V0.8400.77
369_V385_V0.8390.76
264_Q267_I0.8380.76
765_I863_F0.8370.76
564_S570_N0.8360.76
567_D662_G0.8350.76
788_P792_A0.8340.76
205_N213_E0.8330.76
739_A789_W0.8320.76
428_L447_V0.8320.76
589_R722_E0.8320.76
471_G495_G0.8310.76
486_Q515_T0.8290.76
571_M712_Y0.8290.76
627_G652_S0.8280.76
453_T475_M0.8270.75
589_R592_S0.8260.75
572_A576_P0.8240.75
487_L526_F0.8220.75
722_E741_T0.8210.75
564_S568_V0.8210.75
739_A841_V0.8210.75
566_T579_F0.8200.75
789_W840_S0.8200.75
515_T519_T0.8160.74
718_G741_T0.8160.74
767_R793_A0.8150.74
256_V262_K0.8140.74
676_G860_V0.8140.74
402_S413_W0.8140.74
674_Y686_D0.8130.74
671_L693_R0.8120.74
710_G793_A0.8110.74
317_A320_D0.8090.74
696_N720_H0.8090.74
644_I718_G0.8080.74
578_V652_S0.8050.73
820_S844_G0.8040.73
674_Y771_G0.8040.73
662_G769_E0.8030.73
293_D296_L0.8020.73
689_V742_G0.8020.73
547_N553_S0.8020.73
571_M579_F0.8020.73
677_W683_A0.8010.73
624_T655_D0.8000.73
308_D311_T0.7990.73
277_L306_G0.7980.73
441_I445_E0.7980.73
268_K281_S0.7960.73
770_A796_Q0.7950.73
737_Y789_W0.7920.72
384_K441_I0.7920.72
698_I752_L0.7890.72
619_A658_F0.7890.72
456_A485_D0.7880.72
469_G475_M0.7860.72
469_G493_A0.7850.72
288_D397_G0.7840.71
686_D737_Y0.7840.71
361_R364_D0.7820.71
146_V154_L0.7810.71
393_F397_G0.7780.71
165_V169_A0.7770.71
379_A387_V0.7770.71
393_F403_K0.7770.71
839_L863_F0.7760.71
310_G315_A0.7740.70
633_D750_Y0.7710.70
177_T180_M0.7710.70
493_A517_V0.7700.70
674_Y788_P0.7700.70
564_S575_Q0.7680.70
186_N189_G0.7670.70
625_L654_S0.7660.70
457_E460_I0.7660.70
484_S506_A0.7650.70
664_G692_D0.7650.70
190_Q209_L0.7640.70
629_T716_G0.7620.69
416_I457_E0.7610.69
544_L552_W0.7610.69
720_H735_R0.7600.69
582_E589_R0.7600.69
224_S232_D0.7600.69
219_N263_G0.7590.69
756_M794_V0.7590.69
219_N302_M0.7580.69
311_T317_A0.7580.69
147_A150_K0.7570.69
148_I161_F0.7570.69
750_Y824_Q0.7560.69
824_Q856_Q0.7550.69
537_I542_Y0.7530.68
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651_Y697_T0.7270.66
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683_A723_S0.6900.62
381_L385_V0.6900.62
198_A201_M0.6890.62
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353_G379_A0.6880.61
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307_K310_G0.6850.61
400_D406_V0.6850.61
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413_W419_I0.6170.53
690_K700_G0.6170.53
286_M289_T0.6170.53
214_N217_A0.6170.53
475_M487_L0.6160.53
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183_F210_R0.6140.53
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714_S748_Q0.6130.53
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397_G400_D0.5720.48
340_N344_N0.5720.48
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630_L835_L0.5670.47
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713_N764_R0.5660.47
339_E375_N0.5660.47
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852_P855_T0.5650.47
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796_Q859_V0.5640.47
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220_T224_S0.5630.47
836_S862_T0.5630.47
157_K160_G0.5630.47
692_D835_L0.5620.47
192_D200_N0.5620.47
316_N397_G0.5620.47
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310_G320_D0.5610.47
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266_S269_D0.5540.46
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443_M466_T0.5530.46
462_L495_G0.5530.46
839_L858_G0.5520.46
711_D817_A0.5520.46
205_N209_L0.5520.46
794_V821_G0.5520.46
318_V322_G0.5520.46
218_Y238_G0.5510.45
648_I817_A0.5510.45
288_D341_M0.5500.45
526_F552_W0.5490.45
634_S647_L0.5480.45
388_S410_N0.5480.45
565_T570_N0.5480.45
290_Q294_T0.5480.45
769_E838_H0.5470.45
307_K315_A0.5460.45
589_R631_G0.5450.45
309_T316_N0.5450.45
658_F846_G0.5450.45
587_R726_R0.5450.45
469_G495_G0.5440.45
384_K407_S0.5440.45
663_K681_N0.5440.45
611_N714_S0.5440.45
457_E478_D0.5430.44
232_D414_T0.5430.44
412_V415_I0.5430.44
193_I197_I0.5410.44
564_S578_V0.5410.44
688_V722_E0.5410.44
575_Q666_I0.5410.44
351_W356_V0.5400.44
409_E428_L0.5400.44
594_K686_D0.5400.44
627_G756_M0.5400.44
233_G237_T0.5390.44
688_V824_Q0.5390.44
674_Y826_G0.5390.44
203_L255_E0.5390.44
664_G672_G0.5380.44
288_D466_T0.5380.44
346_G354_T0.5370.44
608_N821_G0.5370.44
167_Q193_I0.5360.44
565_T807_N0.5360.44
332_Y336_A0.5360.44
672_G716_G0.5350.44
623_Q750_Y0.5350.44
752_L819_T0.5340.43
495_G526_F0.5340.43
623_Q692_D0.5340.43
702_M812_F0.5330.43
676_G684_Y0.5330.43
677_W686_D0.5330.43
153_L170_G0.5330.43
361_R369_V0.5320.43
387_V402_S0.5310.43
345_N349_N0.5310.43
349_N356_V0.5310.43
526_F546_D0.5300.43
174_K179_A0.5290.43
579_F752_L0.5290.43
577_L580_D0.5290.43
732_W774_V0.5290.43
663_K695_A0.5280.43
152_G245_G0.5280.43
633_D860_V0.5270.43
691_V718_G0.5260.42
377_A604_S0.5260.42
648_I665_N0.5260.42
201_M230_V0.5260.42
564_S582_E0.5260.42
311_T330_I0.5260.42
791_K822_V0.5260.42
248_I363_N0.5250.42
505_G716_G0.5250.42
487_L517_V0.5240.42
201_M210_R0.5230.42
648_I735_R0.5230.42
439_N442_M0.5220.42
695_A711_D0.5220.42
145_F150_K0.5220.42
692_D710_G0.5210.42
230_V234_G0.5210.42
607_I840_S0.5200.42
654_S662_G0.5200.42
605_S737_Y0.5200.42
792_A821_G0.5190.42
670_T769_E0.5190.42
607_I795_R0.5190.42
325_Y332_Y0.5180.42
724_G735_R0.5180.42
313_V317_A0.5170.41
270_G306_G0.5170.41
670_T720_H0.5170.41
735_R739_A0.5170.41
398_A413_W0.5170.41
735_R831_F0.5160.41
232_D236_V0.5160.41
489_V573_A0.5160.41
743_F855_T0.5150.41
690_K824_Q0.5150.41
454_A459_F0.5150.41
696_N795_R0.5150.41
831_F837_G0.5150.41
247_L254_L0.5140.41
387_V412_V0.5140.41
229_E280_G0.5130.41
722_E796_Q0.5130.41
605_S714_S0.5130.41
164_A228_L0.5130.41
187_R229_E0.5130.41
630_L669_Y0.5130.41
219_N229_E0.5130.41
658_F858_G0.5120.41
568_V574_A0.5120.41
546_D549_N0.5120.41
696_N716_G0.5120.41
413_W437_D0.5110.41
283_L346_G0.5100.41
151_G156_V0.5100.41
768_A797_E0.5090.41
142_G148_I0.5090.41
614_T653_H0.5080.40
211_V214_N0.5080.40
576_P844_G0.5080.40
348_A355_M0.5070.40
387_V411_S0.5070.40
408_L417_A0.5070.40
679_H682_G0.5060.40
675_A840_S0.5060.40
413_W440_V0.5050.40
812_F860_V0.5050.40
246_K261_S0.5050.40
303_Q377_A0.5040.40
224_S308_D0.5040.40
720_H793_A0.5040.40
339_E426_T0.5030.40
739_A858_G0.5030.40
605_S767_R0.5020.40
392_S406_V0.5020.40
658_F669_Y0.5020.40
789_W846_G0.5020.40
224_S228_L0.5010.40
285_V314_Q0.5010.40
152_G167_Q0.5010.40
327_N339_E0.5010.40
664_G863_F0.5000.40
664_G712_Y0.5000.40
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4meeA 1 0.3256 100 0.53 Contact Map
3qq2A 2 0.2885 100 0.64 Contact Map
3sltA 1 0.3453 100 0.655 Contact Map
3aehA 1 0.3175 100 0.656 Contact Map
1uynX 1 0.3071 100 0.684 Contact Map
3kvnX 1 0.5295 100 0.721 Contact Map
3syjA 2 0.6095 99.9 0.837 Contact Map
1dabA 5 0.5133 99.9 0.84 Contact Map
3h09A 1 0.5921 99.8 0.85 Contact Map
4om9A 1 0.5794 99.7 0.868 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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