PSUT - ECOLI - GREMLIN Contacts

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PSUT - Putative pseudouridine transporter

UniProt:	P33024	Sequences: MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12032
Length:	416 (399)
Sequences:	1653 (930)
Seq/√Len:	46.6

ECOLI - PSUT NUPX NUPC
BACSU - YUTK NUPC NUPG

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
69_Y	278_G	5.059	1.00
315_D	349_E	4.632	1.00
313_W	316_A	4.217	1.00
277_N	295_E	3.875	1.00
383_R	386_E	3.855	1.00
295_E	337_S	3.726	1.00
23_N	26_S	3.712	1.00
105_I	262_V	3.675	1.00
337_S	340_P	3.489	1.00
319_A	356_I	3.360	1.00
175_T	214_I	3.331	1.00
22_V	393_R	3.160	1.00
170_R	389_Q	2.939	1.00
284_G	292_A	2.921	1.00
161_V	168_M	2.899	1.00
319_A	352_T	2.897	1.00
12_V	308_I	2.833	1.00
20_L	396_A	2.756	1.00
10_M	404_M	2.746	1.00
392_L	396_A	2.676	1.00
77_I	267_M	2.626	1.00
256_L	260_A	2.600	1.00
123_L	127_I	2.591	1.00
309_M	403_L	2.562	1.00
212_G	401_S	2.484	1.00
114_L	244_F	2.479	1.00
22_V	221_S	2.469	1.00
18_F	24_K	2.422	1.00
35_A	215_L	2.408	1.00
166_D	382_K	2.400	1.00
165_I	380_S	2.381	1.00
252_A	268_A	2.351	1.00
325_Q	337_S	2.273	1.00
17_A	219_I	2.265	1.00
57_E	61_L	2.232	1.00
366_F	392_L	2.230	1.00
22_V	170_R	2.095	1.00
253_M	261_G	2.047	0.99
338_F	351_K	2.042	0.99
114_L	248_A	2.033	0.99
66_V	111_L	2.027	0.99
117_Y	241_P	2.010	0.99
17_A	216_F	1.977	0.99
72_A	75_A	1.962	0.99
118_I	244_F	1.955	0.99
148_T	160_I	1.937	0.99
201_Y	358_F	1.937	0.99
309_M	407_T	1.914	0.99
258_I	261_G	1.910	0.99
303_A	320_G	1.899	0.99
248_A	272_I	1.889	0.99
7_V	11_V	1.884	0.99
71_D	100_R	1.823	0.99
209_A	405_S	1.810	0.99
51_P	55_A	1.797	0.99
131_I	135_A	1.783	0.99
220_L	397_A	1.770	0.98
170_R	386_E	1.766	0.98
358_F	405_S	1.745	0.98
364_A	402_N	1.742	0.98
142_E	218_R	1.741	0.98
169_N	223_A	1.714	0.98
138_I	143_S	1.703	0.98
296_S	300_Y	1.700	0.98
257_K	260_A	1.697	0.98
220_L	396_A	1.693	0.98
327_L	399_T	1.666	0.98
44_G	412_F	1.646	0.98
32_V	215_L	1.646	0.98
127_I	130_S	1.607	0.97
155_N	258_I	1.603	0.97
5_R	307_W	1.584	0.97
294_L	298_F	1.578	0.97
171_N	223_A	1.576	0.97
45_I	49_F	1.571	0.97
209_A	212_G	1.568	0.97
20_L	220_L	1.562	0.97
283_I	287_F	1.560	0.97
307_W	313_W	1.551	0.96
17_A	400_L	1.548	0.96
154_Q	372_V	1.545	0.96
102_L	263_A	1.534	0.96
154_Q	368_S	1.523	0.96
33_G	37_L	1.520	0.96
108_V	152_L	1.503	0.96
119_G	122_G	1.499	0.96
113_S	117_Y	1.486	0.96
93_A	96_I	1.484	0.95
123_L	126_R	1.482	0.95
129_G	140_K	1.479	0.95
173_L	386_E	1.470	0.95
4_M	8_V	1.462	0.95
70_S	74_S	1.445	0.95
8_V	307_W	1.441	0.95
18_F	27_I	1.439	0.95
364_A	399_T	1.429	0.94
392_L	395_L	1.420	0.94
174_F	397_A	1.410	0.94
154_Q	367_G	1.407	0.94
292_A	297_I	1.400	0.94
328_A	366_F	1.399	0.94
55_A	58_Q	1.390	0.94
181_M	372_V	1.390	0.94
64_H	68_S	1.386	0.93
275_L	279_I	1.382	0.93
193_A	199_I	1.377	0.93
157_I	179_S	1.362	0.93
259_A	263_A	1.361	0.93
303_A	313_W	1.355	0.93
27_I	219_I	1.354	0.93
155_N	261_G	1.347	0.92
23_N	224_T	1.344	0.92
72_A	274_A	1.329	0.92
256_L	264_T	1.324	0.92
261_G	265_V	1.324	0.92
244_F	248_A	1.320	0.92
70_S	271_A	1.315	0.92
271_A	367_G	1.313	0.91
354_A	413_I	1.311	0.91
169_N	225_E	1.310	0.91
165_I	379_I	1.290	0.91
78_F	98_A	1.281	0.90
74_S	99_F	1.279	0.90
258_I	262_V	1.279	0.90
198_P	342_L	1.278	0.90
15_A	19_L	1.270	0.90
28_S	31_T	1.268	0.90
155_N	375_A	1.267	0.90
110_A	248_A	1.261	0.90
169_N	172_E	1.259	0.90
65_K	69_Y	1.250	0.89
300_Y	317_N	1.247	0.89
294_L	328_A	1.229	0.89
175_T	179_S	1.227	0.88
247_A	251_G	1.225	0.88
65_K	68_S	1.222	0.88
127_I	131_I	1.221	0.88
303_A	317_N	1.195	0.87
315_D	348_L	1.193	0.87
322_L	341_Y	1.192	0.87
246_E	384_A	1.188	0.87
279_I	282_G	1.181	0.86
351_K	355_I	1.181	0.86
246_E	250_S	1.180	0.86
97_F	367_G	1.176	0.86
148_T	152_L	1.174	0.86
49_F	52_G	1.172	0.86
306_A	323_I	1.166	0.86
314_S	318_L	1.163	0.86
104_A	187_S	1.154	0.85
145_V	157_I	1.150	0.85
402_N	405_S	1.141	0.84
38_L	135_A	1.138	0.84
80_S	96_I	1.128	0.84
81_L	96_I	1.123	0.84
110_A	252_A	1.122	0.83
276_I	294_L	1.116	0.83
187_S	258_I	1.103	0.82
80_S	93_A	1.090	0.82
128_L	150_I	1.086	0.81
295_E	325_Q	1.082	0.81
42_I	212_G	1.081	0.81
292_A	296_S	1.080	0.81
16_I	305_L	1.077	0.81
268_A	370_G	1.075	0.81
338_F	356_I	1.074	0.81
45_I	51_P	1.070	0.80
395_L	399_T	1.069	0.80
158_P	180_G	1.067	0.80
409_A	412_F	1.062	0.80
311_V	319_A	1.057	0.80
154_Q	371_V	1.057	0.80
329_I	333_V	1.057	0.80
209_A	358_F	1.054	0.79
341_Y	347_T	1.054	0.79
376_F	387_I	1.049	0.79
16_I	396_A	1.044	0.79
191_G	332_F	1.043	0.79
401_S	405_S	1.042	0.79
125_I	164_F	1.041	0.79
19_L	24_K	1.039	0.78
16_I	379_I	1.034	0.78
313_W	320_G	1.032	0.78
369_I	372_V	1.024	0.77
40_I	408_I	1.021	0.77
330_N	367_G	1.017	0.77
61_L	64_H	1.016	0.77
145_V	179_S	1.014	0.77
273_I	329_I	1.014	0.77
384_A	398_A	1.007	0.76
14_L	32_V	1.005	0.76
335_Y	361_C	1.004	0.76
342_L	353_I	1.000	0.76
216_F	397_A	0.997	0.75
43_G	352_T	0.994	0.75
283_I	286_W	0.988	0.75
195_M	336_L	0.985	0.75
154_Q	327_L	0.984	0.74
395_L	398_A	0.983	0.74
14_L	219_I	0.982	0.74
80_S	84_P	0.980	0.74
6_S	351_K	0.979	0.74
43_G	320_G	0.976	0.74
293_S	296_S	0.969	0.73
21_S	219_I	0.964	0.73
321_S	325_Q	0.963	0.73
149_T	183_S	0.963	0.73
120_V	350_V	0.963	0.73
62_G	65_K	0.956	0.72
30_R	34_A	0.953	0.72
366_F	395_L	0.951	0.72
5_R	8_V	0.947	0.72
261_G	375_A	0.946	0.72
189_M	202_L	0.944	0.71
67_M	190_I	0.943	0.71
44_G	48_Y	0.943	0.71
152_L	160_I	0.936	0.71
284_G	293_S	0.936	0.71
59_A	62_G	0.936	0.71
132_F	136_L	0.935	0.71
118_I	121_M	0.935	0.71
74_S	271_A	0.933	0.70
169_N	224_T	0.925	0.70
175_T	217_A	0.923	0.70
167_R	228_Q	0.921	0.69
266_V	270_V	0.920	0.69
165_I	176_A	0.917	0.69
83_G	96_I	0.914	0.69
326_K	332_F	0.914	0.69
13_L	404_M	0.910	0.69
160_I	262_V	0.906	0.68
13_L	216_F	0.905	0.68
114_L	272_I	0.903	0.68
179_S	210_I	0.901	0.68
106_I	255_G	0.900	0.68
55_A	59_A	0.898	0.68
284_G	291_N	0.895	0.67
195_M	369_I	0.894	0.67
369_I	391_G	0.889	0.67
138_I	214_I	0.887	0.67
125_I	184_I	0.884	0.66
188_M	367_G	0.883	0.66
40_I	412_F	0.883	0.66
28_S	33_G	0.878	0.66
206_S	209_A	0.876	0.66
8_V	162_K	0.875	0.65
280_I	292_A	0.874	0.65
18_F	219_I	0.874	0.65
35_A	136_L	0.874	0.65
369_I	387_I	0.864	0.65
68_S	71_D	0.862	0.64
170_R	221_S	0.854	0.64
147_V	191_G	0.853	0.63
70_S	104_A	0.845	0.63
215_L	402_N	0.843	0.63
14_L	411_F	0.842	0.62
129_G	143_S	0.840	0.62
116_Y	163_P	0.838	0.62
35_A	48_Y	0.836	0.62
10_M	212_G	0.836	0.62
54_W	57_E	0.835	0.62
249_A	253_M	0.832	0.62
6_S	203_L	0.828	0.61
155_N	188_M	0.828	0.61
80_S	83_G	0.826	0.61
369_I	395_L	0.826	0.61
348_L	353_I	0.824	0.61
314_S	349_E	0.822	0.61
34_A	136_L	0.818	0.60
170_R	390_L	0.817	0.60
49_F	53_K	0.815	0.60
12_V	15_A	0.813	0.60
76_F	97_F	0.812	0.60
59_A	203_L	0.810	0.59
42_I	112_I	0.809	0.59
181_M	398_A	0.807	0.59
295_E	340_P	0.804	0.59
355_I	404_M	0.804	0.59
265_V	366_F	0.801	0.59
318_L	341_Y	0.800	0.59
10_M	405_S	0.800	0.59
120_V	301_V	0.799	0.58
146_A	214_I	0.798	0.58
98_A	263_A	0.798	0.58
242_K	389_Q	0.797	0.58
37_L	308_I	0.797	0.58
101_V	259_A	0.793	0.58
99_F	103_P	0.785	0.57
39_Q	212_G	0.782	0.57
209_A	402_N	0.776	0.56
299_G	321_S	0.774	0.56
281_G	313_W	0.773	0.56
28_S	136_L	0.772	0.56
274_A	278_G	0.766	0.55
28_S	137_N	0.765	0.55
350_V	353_I	0.765	0.55
43_G	341_Y	0.764	0.55
121_M	125_I	0.761	0.55
136_L	176_A	0.760	0.55
189_M	193_A	0.757	0.54
365_N	368_S	0.756	0.54
173_L	383_R	0.755	0.54
259_A	320_G	0.754	0.54
168_M	176_A	0.753	0.54
121_M	163_P	0.753	0.54
219_I	308_I	0.752	0.54
167_R	295_E	0.752	0.54
132_F	395_L	0.751	0.54
149_T	189_M	0.751	0.54
34_A	37_L	0.750	0.54
254_T	257_K	0.747	0.53
358_F	409_A	0.746	0.53
212_G	405_S	0.745	0.53
141_I	168_M	0.745	0.53
318_L	348_L	0.744	0.53
13_L	309_M	0.743	0.53
355_I	393_R	0.741	0.53
112_I	121_M	0.740	0.53
41_A	44_G	0.735	0.52
305_L	403_L	0.735	0.52
129_G	132_F	0.735	0.52
141_I	157_I	0.734	0.52
327_L	364_A	0.734	0.52
350_V	354_A	0.732	0.52
112_I	152_L	0.731	0.52
309_M	355_I	0.731	0.52
108_V	269_F	0.730	0.52
69_Y	275_L	0.730	0.52
154_Q	259_A	0.729	0.52
38_L	253_M	0.728	0.51
371_V	374_G	0.728	0.51
216_F	370_G	0.726	0.51
112_I	183_S	0.726	0.51
113_S	241_P	0.726	0.51
58_Q	62_G	0.725	0.51
184_I	302_L	0.723	0.51
171_N	218_R	0.722	0.51
265_V	371_V	0.717	0.50
78_F	103_P	0.717	0.50
185_A	188_M	0.716	0.50
179_S	351_K	0.715	0.50
171_N	210_I	0.713	0.50
84_P	220_L	0.713	0.50
27_I	59_A	0.712	0.50
154_Q	249_A	0.704	0.49
15_A	18_F	0.702	0.49
183_S	198_P	0.701	0.49
189_M	206_S	0.698	0.49
53_K	57_E	0.697	0.48
75_A	80_S	0.694	0.48
184_I	188_M	0.693	0.48
111_L	264_T	0.691	0.48
273_I	321_S	0.690	0.48
164_F	398_A	0.690	0.48
7_V	385_P	0.689	0.48
358_F	402_N	0.685	0.47
297_I	301_V	0.684	0.47
170_R	383_R	0.683	0.47
147_V	150_I	0.683	0.47
43_G	313_W	0.683	0.47
45_I	296_S	0.683	0.47
322_L	334_A	0.680	0.47
311_V	356_I	0.680	0.47
34_A	162_K	0.672	0.46
385_P	389_Q	0.671	0.46
178_C	301_V	0.671	0.46
203_L	207_L	0.671	0.46
202_L	218_R	0.669	0.46
36_L	408_I	0.669	0.46
142_E	175_T	0.668	0.46
7_V	411_F	0.666	0.45
145_V	213_G	0.666	0.45
145_V	176_A	0.665	0.45
112_I	323_I	0.665	0.45
178_C	362_G	0.665	0.45
243_S	292_A	0.664	0.45
77_I	266_V	0.660	0.45
288_G	328_A	0.658	0.45
352_T	356_I	0.657	0.44
330_N	333_V	0.657	0.44
95_F	100_R	0.656	0.44
10_M	292_A	0.656	0.44
317_N	320_G	0.656	0.44
331_E	334_A	0.655	0.44
71_D	75_A	0.655	0.44
185_A	325_Q	0.654	0.44
299_G	320_G	0.654	0.44
375_A	387_I	0.652	0.44
364_A	368_S	0.652	0.44
330_N	334_A	0.652	0.44
149_T	179_S	0.651	0.44
26_S	358_F	0.649	0.44
35_A	147_V	0.648	0.44
311_V	352_T	0.648	0.44
149_T	210_I	0.643	0.43
14_L	215_L	0.640	0.43
282_G	286_W	0.639	0.43
8_V	308_I	0.639	0.43
14_L	36_L	0.637	0.43
72_A	277_N	0.636	0.42
259_A	262_V	0.635	0.42
141_I	144_F	0.634	0.42
62_G	114_L	0.633	0.42
154_Q	320_G	0.632	0.42
256_L	263_A	0.632	0.42
267_M	282_G	0.629	0.42
52_G	142_E	0.628	0.42
53_K	200_D	0.628	0.42
111_L	272_I	0.628	0.42
370_G	391_G	0.626	0.41
203_L	355_I	0.624	0.41
123_L	406_A	0.624	0.41
54_W	58_Q	0.623	0.41
18_F	22_V	0.623	0.41
330_N	365_N	0.621	0.41
168_M	409_A	0.620	0.41
277_N	293_S	0.620	0.41
82_V	99_F	0.619	0.41
51_P	54_W	0.619	0.41
25_K	134_K	0.618	0.41
119_G	265_V	0.617	0.41
372_V	376_F	0.617	0.41
221_S	314_S	0.617	0.41
181_M	394_A	0.617	0.41
263_A	266_V	0.616	0.41
165_I	279_I	0.615	0.40
58_Q	61_L	0.615	0.40
370_G	402_N	0.614	0.40
399_T	402_N	0.612	0.40
65_K	278_G	0.612	0.40
14_L	379_I	0.611	0.40
146_A	330_N	0.610	0.40
119_G	123_L	0.608	0.40
8_V	12_V	0.608	0.40
355_I	399_T	0.605	0.39
82_V	95_F	0.604	0.39
279_I	318_L	0.603	0.39
201_Y	405_S	0.603	0.39
121_M	209_A	0.603	0.39
191_G	199_I	0.602	0.39
101_V	191_G	0.602	0.39
367_G	389_Q	0.600	0.39
65_K	120_V	0.598	0.39
30_R	137_N	0.598	0.39
38_L	136_L	0.596	0.39
13_L	106_I	0.595	0.39
19_L	260_A	0.595	0.39
149_T	157_I	0.594	0.38
40_I	44_G	0.594	0.38
221_S	390_L	0.594	0.38
138_I	171_N	0.593	0.38
109_T	183_S	0.593	0.38
81_L	94_G	0.591	0.38
148_T	209_A	0.590	0.38
101_V	332_F	0.587	0.38
139_S	172_E	0.586	0.38
107_F	142_E	0.586	0.38
62_G	66_V	0.584	0.37
143_S	153_G	0.584	0.37
165_I	280_I	0.583	0.37
272_I	342_L	0.583	0.37
312_D	318_L	0.582	0.37
108_V	159_A	0.581	0.37
305_L	308_I	0.579	0.37
403_L	406_A	0.579	0.37
318_L	347_T	0.577	0.37
45_I	355_I	0.576	0.37
70_S	100_R	0.575	0.37
172_E	294_L	0.574	0.37
77_I	108_V	0.574	0.37
129_G	168_M	0.573	0.36
60_A	270_V	0.572	0.36
144_F	160_I	0.569	0.36
41_A	45_I	0.569	0.36
261_G	374_G	0.567	0.36
177_I	372_V	0.567	0.36
187_S	369_I	0.566	0.36
352_T	357_S	0.565	0.36
29_L	33_G	0.565	0.36
276_I	289_F	0.564	0.36
102_L	259_A	0.563	0.36
368_S	371_V	0.563	0.36
162_K	311_V	0.562	0.35
159_A	258_I	0.562	0.35
165_I	340_P	0.561	0.35
29_L	152_L	0.559	0.35
56_V	129_G	0.558	0.35
247_A	324_G	0.558	0.35
326_K	365_N	0.557	0.35
4_M	130_S	0.557	0.35
120_V	123_L	0.556	0.35
265_V	399_T	0.556	0.35
174_F	178_C	0.555	0.35
6_S	411_F	0.554	0.35
116_Y	122_G	0.554	0.35
146_A	209_A	0.551	0.34
136_L	179_S	0.551	0.34
305_L	389_Q	0.550	0.34
52_G	197_V	0.550	0.34
147_V	313_W	0.550	0.34
350_V	412_F	0.549	0.34
341_Y	346_G	0.549	0.34
407_T	410_G	0.549	0.34
14_L	29_L	0.547	0.34
69_Y	274_A	0.546	0.34
298_F	328_A	0.546	0.34
241_P	250_S	0.546	0.34
173_L	336_L	0.546	0.34
177_I	186_G	0.545	0.34
227_S	231_F	0.545	0.34
253_M	260_A	0.545	0.34
131_I	314_S	0.545	0.34
70_S	216_F	0.542	0.34
130_S	135_A	0.542	0.34
188_M	371_V	0.542	0.34
104_A	210_I	0.541	0.34
276_I	374_G	0.540	0.34
19_L	219_I	0.539	0.33
188_M	332_F	0.539	0.33
380_S	386_E	0.539	0.33
325_Q	330_N	0.538	0.33
223_A	227_S	0.538	0.33
262_V	271_A	0.537	0.33
74_S	407_T	0.537	0.33
255_G	259_A	0.536	0.33
297_I	320_G	0.536	0.33
5_R	9_G	0.536	0.33
45_I	55_A	0.535	0.33
35_A	39_Q	0.534	0.33
163_P	381_P	0.534	0.33
336_L	339_S	0.533	0.33
49_F	220_L	0.532	0.33
258_I	375_A	0.531	0.33
181_M	369_I	0.530	0.33
43_G	354_A	0.530	0.33
280_I	296_S	0.529	0.33
42_I	45_I	0.528	0.32
196_G	330_N	0.528	0.32
125_I	412_F	0.528	0.32
74_S	203_L	0.527	0.32
144_F	149_T	0.526	0.32
188_M	265_V	0.526	0.32
4_M	224_T	0.525	0.32
114_L	118_I	0.525	0.32
84_P	340_P	0.525	0.32
37_L	41_A	0.523	0.32
216_F	373_V	0.523	0.32
226_P	230_T	0.522	0.32
147_V	179_S	0.522	0.32
149_T	180_G	0.522	0.32
190_I	194_G	0.521	0.32
6_S	282_G	0.520	0.32
98_A	267_M	0.520	0.32
160_I	213_G	0.519	0.32
184_I	314_S	0.519	0.32
62_G	275_L	0.518	0.32
107_F	320_G	0.518	0.32
18_F	25_K	0.518	0.32
114_L	264_T	0.517	0.32
161_V	176_A	0.517	0.32
250_S	384_A	0.517	0.32
292_A	300_Y	0.516	0.31
97_F	188_M	0.516	0.31
31_T	207_L	0.515	0.31
109_T	159_A	0.515	0.31
371_V	375_A	0.514	0.31
215_L	391_G	0.513	0.31
157_I	375_A	0.513	0.31
247_A	252_A	0.513	0.31
399_T	403_L	0.513	0.31
105_I	259_A	0.513	0.31
210_I	223_A	0.512	0.31
129_G	229_V	0.512	0.31
387_I	395_L	0.512	0.31
183_S	193_A	0.512	0.31
43_G	398_A	0.512	0.31
149_T	158_P	0.511	0.31
178_C	401_S	0.511	0.31
201_Y	212_G	0.509	0.31
74_S	204_A	0.509	0.31
159_A	178_C	0.509	0.31
166_D	170_R	0.509	0.31
139_S	335_Y	0.508	0.31
9_G	409_A	0.508	0.31
325_Q	328_A	0.507	0.31
373_V	408_I	0.506	0.31
113_S	246_E	0.505	0.31
150_I	210_I	0.505	0.31
283_I	408_I	0.505	0.31
245_I	366_F	0.505	0.31
4_M	248_A	0.504	0.30
79_G	96_I	0.504	0.30
408_I	411_F	0.503	0.30
41_A	137_N	0.503	0.30
77_I	263_A	0.502	0.30
23_N	321_S	0.501	0.30
108_V	327_L	0.500	0.30
377_S	388_A	0.500	0.30

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4pd6A	3	0.9591	100	0.113	Contact Map
2cfqA	1	0.863	54.3	0.975	Contact Map
2mofA	1	0.0769	28.3	0.979	Contact Map
4ikvA	1	0.4159	12.1	0.982	Contact Map
4o6yA	2	0.4519	10.9	0.982	Contact Map
4j05A	3	0.3654	6.8	0.984	Contact Map
4oh3A	2	0.4183	5.6	0.985	Contact Map
4f35D	2	0.863	5.3	0.985	Contact Map
4fc4A	3	0.3918	5.3	0.985	Contact Map
4czbA	2	0.3245	3.4	0.986	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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