FRVR - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

FRVR - Putative frv operon regulatory protein

UniProt:	P32152	Sequences: MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11861
Length:	582 (565)
Sequences:	2252 (1974)
Seq/√Len:	83.0

ECOLI - FRVR
BACSU - MANR LICR MTLR

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
5_R	37_D	5.751	1.00
139_E	201_Q	4.800	1.00
349_Q	376_R	4.136	1.00
78_N	111_R	4.100	1.00
269_D	343_R	3.972	1.00
302_K	329_D	3.815	1.00
29_V	34_I	3.800	1.00
123_C	137_E	3.767	1.00
38_I	42_N	3.630	1.00
103_L	108_V	3.369	1.00
85_L	100_A	3.329	1.00
139_E	143_V	3.200	1.00
571_G	574_A	3.200	1.00
103_L	111_R	3.100	1.00
457_R	522_A	2.942	1.00
521_L	524_P	2.871	1.00
354_L	357_Q	2.730	1.00
122_T	148_N	2.672	1.00
466_R	483_A	2.670	1.00
351_I	381_R	2.668	1.00
365_Q	369_E	2.624	1.00
447_A	573_E	2.617	1.00
143_V	229_A	2.615	1.00
533_N	567_A	2.613	1.00
260_P	266_N	2.612	1.00
469_C	483_A	2.576	1.00
143_V	201_Q	2.569	1.00
116_K	127_S	2.548	1.00
103_L	107_W	2.541	1.00
320_R	326_P	2.541	1.00
462_Q	490_E	2.521	1.00
123_C	135_I	2.469	1.00
448_P	475_Q	2.436	1.00
403_H	415_T	2.338	1.00
33_T	37_D	2.334	1.00
253_Q	273_V	2.310	1.00
458_G	467_Q	2.275	1.00
460_S	463_H	2.254	1.00
450_S	572_Y	2.173	1.00
12_L	18_R	2.171	1.00
269_D	340_A	2.122	1.00
362_T	365_Q	2.114	1.00
364_N	401_N	2.109	1.00
468_I	519_I	2.100	1.00
42_N	51_I	2.098	1.00
12_L	23_L	2.091	1.00
52_F	62_E	2.072	1.00
511_E	539_C	2.036	1.00
42_N	53_A	2.027	1.00
465_T	483_A	2.020	1.00
526_E	529_N	2.019	1.00
29_V	37_D	2.009	1.00
352_I	368_I	1.996	1.00
138_T	141_K	1.994	1.00
350_P	399_I	1.989	1.00
473_V	478_I	1.973	1.00
464_I	519_I	1.954	1.00
302_K	309_F	1.931	1.00
468_I	537_I	1.923	1.00
31_G	35_L	1.915	1.00
5_R	33_T	1.909	1.00
390_R	393_I	1.891	1.00
455_N	522_A	1.889	1.00
259_V	311_M	1.874	1.00
23_L	34_I	1.850	1.00
417_K	424_G	1.847	1.00
218_V	224_F	1.839	1.00
267_I	337_F	1.819	1.00
126_A	136_D	1.818	1.00
79_D	115_L	1.809	1.00
486_I	537_I	1.805	1.00
194_A	236_L	1.803	1.00
350_P	375_C	1.797	1.00
262_I	314_H	1.797	1.00
524_P	533_N	1.792	1.00
464_I	535_V	1.787	1.00
316_I	333_I	1.780	1.00
49_A	63_I	1.779	1.00
312_S	334_G	1.776	1.00
313_L	329_D	1.768	1.00
470_A	474_A	1.766	1.00
296_S	330_S	1.757	1.00
489_R	495_N	1.748	1.00
83_L	115_L	1.741	1.00
286_A	331_D	1.740	1.00
479_T	512_R	1.738	1.00
252_V	280_L	1.723	1.00
455_N	520_T	1.701	1.00
6_Q	40_Y	1.697	1.00
255_L	337_F	1.693	1.00
484_Q	488_A	1.689	1.00
399_I	416_V	1.689	1.00
354_L	361_A	1.677	1.00
195_I	233_L	1.673	1.00
118_R	145_L	1.670	1.00
258_R	318_L	1.664	1.00
424_G	427_Q	1.656	1.00
283_C	287_P	1.655	1.00
17_P	60_Q	1.655	1.00
461_W	527_V	1.630	1.00
137_E	142_R	1.629	1.00
128_R	131_L	1.622	1.00
563_A	567_A	1.610	1.00
10_V	41_L	1.607	1.00
12_L	26_Q	1.601	1.00
272_L	340_A	1.598	1.00
477_H	513_R	1.583	1.00
254_G	322_Q	1.579	1.00
3_N	6_Q	1.563	1.00
477_H	515_R	1.553	1.00
294_R	330_S	1.536	1.00
295_Q	330_S	1.532	1.00
502_A	532_I	1.527	1.00
259_V	337_F	1.526	0.99
308_A	334_G	1.521	0.99
78_N	107_W	1.518	0.99
348_R	432_L	1.508	0.99
457_R	523_Q	1.491	0.99
12_L	27_T	1.491	0.99
54_S	57_A	1.481	0.99
256_L	273_V	1.468	0.99
17_P	58_G	1.451	0.99
190_S	236_L	1.448	0.99
514_F	541_A	1.437	0.99
478_I	482_E	1.433	0.99
449_G	475_Q	1.433	0.99
496_L	527_V	1.427	0.99
279_H	336_Y	1.425	0.99
263_A	311_M	1.416	0.99
495_N	527_V	1.412	0.99
52_F	60_Q	1.409	0.99
55_G	58_G	1.404	0.99
123_C	142_R	1.403	0.99
272_L	276_I	1.402	0.99
267_I	340_A	1.401	0.99
174_C	192_I	1.401	0.99
382_S	385_E	1.400	0.99
79_D	111_R	1.400	0.99
272_L	343_R	1.399	0.99
6_Q	37_D	1.397	0.99
24_A	34_I	1.396	0.99
20_P	59_Y	1.395	0.99
147_A	194_A	1.388	0.99
38_I	51_I	1.388	0.99
115_L	125_L	1.387	0.99
451_F	471_Q	1.385	0.99
469_C	537_I	1.384	0.99
399_I	414_I	1.382	0.99
124_C	136_D	1.379	0.99
473_V	483_A	1.376	0.99
500_R	533_N	1.374	0.99
13_L	61_L	1.363	0.99
466_R	487_I	1.361	0.99
428_I	432_L	1.361	0.99
260_P	269_D	1.352	0.99
454_S	520_T	1.350	0.99
458_G	464_I	1.347	0.99
462_Q	466_R	1.344	0.99
21_G	25_Q	1.343	0.99
38_I	59_Y	1.343	0.99
79_D	114_R	1.340	0.99
95_A	105_E	1.333	0.99
259_V	312_S	1.332	0.99
372_V	429_K	1.331	0.99
276_I	333_I	1.327	0.99
459_E	463_H	1.325	0.99
201_Q	229_A	1.323	0.99
354_L	402_S	1.319	0.99
9_I	23_L	1.319	0.99
476_H	512_R	1.315	0.98
226_G	229_A	1.312	0.98
490_E	495_N	1.311	0.98
139_E	229_A	1.308	0.98
516_G	536_L	1.308	0.98
347_E	376_R	1.307	0.98
91_F	134_F	1.305	0.98
21_G	31_G	1.301	0.98
569_L	578_L	1.300	0.98
32_R	36_R	1.296	0.98
271_Q	343_R	1.295	0.98
468_I	517_F	1.290	0.98
126_A	134_F	1.278	0.98
32_R	338_A	1.268	0.98
283_C	286_A	1.266	0.98
93_P	132_G	1.266	0.98
379_I	395_P	1.264	0.98
147_A	197_A	1.257	0.98
308_A	312_S	1.255	0.98
53_A	59_Y	1.253	0.98
488_A	491_G	1.251	0.98
572_Y	576_M	1.245	0.98
65_E	68_S	1.244	0.98
190_S	194_A	1.244	0.98
469_C	486_I	1.243	0.98
351_I	395_P	1.236	0.98
570_T	574_A	1.232	0.98
308_A	338_A	1.231	0.98
456_V	519_I	1.228	0.98
94_R	105_E	1.227	0.98
24_A	31_G	1.227	0.98
420_I	428_I	1.220	0.98
472_L	478_I	1.209	0.97
368_I	375_C	1.209	0.97
97_L	108_V	1.209	0.97
107_W	111_R	1.202	0.97
298_M	329_D	1.200	0.97
395_P	411_N	1.200	0.97
176_N	216_Q	1.200	0.97
483_A	487_I	1.199	0.97
173_A	177_Q	1.194	0.97
482_E	539_C	1.189	0.97
445_F	518_F	1.181	0.97
400_N	415_T	1.176	0.97
95_A	99_S	1.172	0.97
521_L	533_N	1.171	0.97
105_E	132_G	1.164	0.97
450_S	575_F	1.160	0.97
78_N	81_R	1.160	0.97
473_V	480_A	1.158	0.97
478_I	539_C	1.157	0.97
295_Q	332_L	1.152	0.96
29_V	33_T	1.152	0.96
208_Q	211_G	1.149	0.96
234_T	238_E	1.149	0.96
450_S	520_T	1.147	0.96
356_D	360_I	1.141	0.96
256_L	272_L	1.139	0.96
463_H	466_R	1.139	0.96
514_F	540_A	1.133	0.96
526_E	531_V	1.131	0.96
177_Q	213_E	1.129	0.96
30_S	33_T	1.128	0.96
469_C	473_V	1.125	0.96
357_Q	361_A	1.121	0.96
572_Y	575_F	1.119	0.96
82_L	115_L	1.118	0.96
355_S	402_S	1.110	0.96
139_E	205_E	1.108	0.96
349_Q	394_E	1.107	0.96
83_L	119_Y	1.106	0.96
534_H	539_C	1.102	0.95
33_T	36_R	1.101	0.95
6_Q	41_L	1.097	0.95
431_F	435_A	1.096	0.95
550_I	554_L	1.091	0.95
169_H	220_H	1.089	0.95
520_T	534_H	1.086	0.95
527_V	535_V	1.079	0.95
340_A	343_R	1.078	0.95
534_H	567_A	1.076	0.95
279_H	505_H	1.075	0.95
516_G	550_I	1.073	0.95
210_P	213_E	1.071	0.95
255_L	312_S	1.069	0.95
336_Y	339_C	1.061	0.94
319_L	327_L	1.057	0.94
342_E	367_A	1.053	0.94
263_A	267_I	1.053	0.94
445_F	450_S	1.052	0.94
202_L	229_A	1.051	0.94
275_N	343_R	1.048	0.94
239_K	282_R	1.048	0.94
93_P	96_Q	1.041	0.94
93_P	131_L	1.037	0.94
455_N	521_L	1.034	0.94
465_T	487_I	1.028	0.93
374_N	429_K	1.028	0.93
98_A	108_V	1.025	0.93
502_A	527_V	1.021	0.93
458_G	521_L	1.021	0.93
178_H	183_M	1.017	0.93
210_P	234_T	1.012	0.93
527_V	532_I	1.010	0.93
81_R	100_A	1.006	0.93
102_N	527_V	1.004	0.93
36_R	40_Y	0.998	0.92
210_P	230_V	0.997	0.92
350_P	432_L	0.996	0.92
367_A	419_I	0.996	0.92
357_Q	360_I	0.994	0.92
467_Q	471_Q	0.994	0.92
339_C	343_R	0.994	0.92
371_D	429_K	0.993	0.92
141_K	144_I	0.992	0.92
24_A	29_V	0.992	0.92
106_T	109_A	0.991	0.92
400_N	413_Y	0.991	0.92
354_L	359_A	0.988	0.92
312_S	316_I	0.987	0.92
238_E	285_A	0.987	0.92
279_H	331_D	0.987	0.92
569_L	574_A	0.983	0.92
465_T	469_C	0.982	0.92
371_D	425_I	0.982	0.92
3_N	40_Y	0.979	0.92
569_L	575_F	0.979	0.92
507_W	540_A	0.975	0.92
449_G	517_F	0.975	0.92
465_T	486_I	0.975	0.92
414_I	424_G	0.973	0.91
309_F	329_D	0.970	0.91
534_H	563_A	0.969	0.91
336_Y	359_A	0.969	0.91
293_H	332_L	0.966	0.91
500_R	567_A	0.966	0.91
137_E	143_V	0.965	0.91
372_V	425_I	0.961	0.91
252_V	273_V	0.960	0.91
495_N	504_P	0.957	0.91
65_E	69_F	0.957	0.91
485_R	506_C	0.955	0.91
81_R	101_L	0.952	0.91
465_T	537_I	0.952	0.91
258_R	261_G	0.952	0.91
256_L	259_V	0.949	0.90
232_T	296_S	0.947	0.90
286_A	295_Q	0.946	0.90
127_S	133_H	0.944	0.90
367_A	371_D	0.944	0.90
482_E	486_I	0.943	0.90
255_L	315_F	0.942	0.90
390_R	395_P	0.940	0.90
471_Q	517_F	0.939	0.90
108_V	111_R	0.939	0.90
19_T	58_G	0.938	0.90
449_G	477_H	0.938	0.90
173_A	217_I	0.938	0.90
273_V	277_T	0.937	0.90
163_T	166_N	0.933	0.90
482_E	506_C	0.932	0.90
211_G	227_D	0.927	0.89
496_L	528_N	0.927	0.89
171_S	188_L	0.927	0.89
461_W	493_G	0.925	0.89
252_V	255_L	0.925	0.89
472_L	517_F	0.925	0.89
348_R	397_L	0.925	0.89
257_Q	261_G	0.924	0.89
71_Q	75_K	0.924	0.89
451_F	517_F	0.919	0.89
115_L	119_Y	0.918	0.89
485_R	488_A	0.918	0.89
93_P	105_E	0.917	0.89
83_L	149_L	0.916	0.89
283_C	327_L	0.915	0.89
282_R	286_A	0.911	0.89
184_Q	241_H	0.911	0.89
108_V	115_L	0.910	0.88
68_S	71_Q	0.900	0.88
173_A	213_E	0.900	0.88
63_I	69_F	0.900	0.88
565_I	568_G	0.899	0.88
214_I	230_V	0.897	0.88
554_L	579_L	0.893	0.88
317_T	320_R	0.892	0.87
51_I	54_S	0.892	0.87
211_G	230_V	0.889	0.87
518_F	575_F	0.888	0.87
353_L	404_Y	0.887	0.87
456_V	522_A	0.886	0.87
537_I	541_A	0.884	0.87
194_A	198_L	0.884	0.87
252_V	277_T	0.882	0.87
280_L	283_C	0.881	0.87
420_I	425_I	0.880	0.87
252_V	256_L	0.880	0.87
296_S	332_L	0.878	0.87
300_N	304_A	0.876	0.86
467_Q	470_A	0.874	0.86
360_I	402_S	0.872	0.86
462_Q	487_I	0.871	0.86
98_A	133_H	0.871	0.86
13_L	24_A	0.870	0.86
481_D	510_Q	0.867	0.86
272_L	315_F	0.866	0.86
112_L	115_L	0.864	0.86
418_N	424_G	0.863	0.86
522_A	570_T	0.861	0.86
183_M	237_I	0.861	0.86
352_I	365_Q	0.860	0.85
481_D	484_Q	0.859	0.85
416_V	420_I	0.856	0.85
112_L	116_K	0.855	0.85
53_A	58_G	0.854	0.85
194_A	336_Y	0.851	0.85
315_F	318_L	0.851	0.85
258_R	315_F	0.851	0.85
240_Q	283_C	0.850	0.85
195_I	276_I	0.849	0.85
478_I	483_A	0.849	0.85
483_A	486_I	0.849	0.85
316_I	327_L	0.848	0.85
365_Q	380_A	0.846	0.85
4_E	8_K	0.845	0.84
170_L	173_A	0.845	0.84
19_T	24_A	0.844	0.84
458_G	519_I	0.843	0.84
342_E	345_Q	0.842	0.84
472_L	515_R	0.841	0.84
447_A	572_Y	0.839	0.84
381_R	389_I	0.839	0.84
79_D	118_R	0.838	0.84
312_S	315_F	0.836	0.84
354_L	401_N	0.832	0.84
200_N	204_D	0.831	0.83
446_S	449_G	0.830	0.83
309_F	313_L	0.827	0.83
445_F	449_G	0.819	0.83
256_L	337_F	0.817	0.82
459_E	523_Q	0.816	0.82
354_L	358_N	0.816	0.82
564_E	568_G	0.816	0.82
506_C	511_E	0.813	0.82
364_N	420_I	0.813	0.82
9_I	41_L	0.813	0.82
210_P	237_I	0.812	0.82
3_N	37_D	0.812	0.82
122_T	145_L	0.810	0.82
218_V	225_L	0.808	0.82
356_D	361_A	0.808	0.82
489_R	505_H	0.808	0.82
255_L	318_L	0.806	0.82
284_L	325_I	0.805	0.81
67_R	71_Q	0.800	0.81
311_M	315_F	0.800	0.81
286_A	293_H	0.799	0.81
194_A	197_A	0.799	0.81
233_L	236_L	0.797	0.81
17_P	57_A	0.797	0.81
451_F	467_Q	0.796	0.81
554_L	558_L	0.795	0.81
123_C	145_L	0.794	0.81
91_F	132_G	0.790	0.80
185_G	382_S	0.790	0.80
540_A	543_D	0.789	0.80
497_I	557_I	0.788	0.80
506_C	510_Q	0.786	0.80
468_I	471_Q	0.786	0.80
426_E	429_K	0.785	0.80
354_L	382_S	0.785	0.80
420_I	424_G	0.782	0.80
296_S	301_L	0.782	0.80
105_E	359_A	0.782	0.80
506_C	539_C	0.781	0.79
170_L	196_Y	0.781	0.79
178_H	384_S	0.778	0.79
35_L	384_S	0.778	0.79
203_T	222_G	0.778	0.79
27_T	34_I	0.777	0.79
551_F	555_A	0.776	0.79
464_I	468_I	0.776	0.79
32_R	37_D	0.775	0.79
521_L	525_V	0.770	0.79
35_L	555_A	0.769	0.78
455_N	519_I	0.764	0.78
171_S	189_S	0.764	0.78
239_K	336_Y	0.763	0.78
357_Q	363_I	0.763	0.78
537_I	540_A	0.763	0.78
461_W	496_L	0.762	0.78
461_W	487_I	0.762	0.78
202_L	225_L	0.761	0.78
87_L	146_L	0.760	0.78
257_Q	268_I	0.760	0.78
498_V	530_E	0.758	0.77
78_N	103_L	0.757	0.77
466_R	484_Q	0.757	0.77
137_E	201_Q	0.756	0.77
66_R	73_L	0.755	0.77
185_G	384_S	0.755	0.77
91_F	131_L	0.755	0.77
215_K	218_V	0.754	0.77
9_I	18_R	0.753	0.77
364_N	425_I	0.752	0.77
349_Q	378_I	0.750	0.77
360_I	493_G	0.746	0.76
489_R	504_P	0.745	0.76
284_L	288_V	0.742	0.76
356_D	359_A	0.742	0.76
485_R	507_W	0.738	0.76
105_E	109_A	0.738	0.76
214_I	218_V	0.737	0.75
20_P	58_G	0.736	0.75
564_E	567_A	0.735	0.75
279_H	332_L	0.735	0.75
316_I	334_G	0.734	0.75
24_A	58_G	0.734	0.75
308_A	341_L	0.733	0.75
536_L	539_C	0.733	0.75
229_A	332_L	0.732	0.75
113_P	127_S	0.732	0.75
210_P	214_I	0.731	0.75
49_A	69_F	0.731	0.75
293_H	330_S	0.730	0.75
119_Y	123_C	0.728	0.75
9_I	37_D	0.726	0.74
170_L	217_I	0.725	0.74
496_L	532_I	0.721	0.74
518_F	536_L	0.718	0.74
209_Y	213_E	0.717	0.73
298_M	330_S	0.716	0.73
177_Q	216_Q	0.715	0.73
573_E	577_E	0.715	0.73
397_L	428_I	0.714	0.73
416_V	424_G	0.713	0.73
534_H	540_A	0.713	0.73
379_I	389_I	0.712	0.73
19_T	22_E	0.711	0.73
276_I	336_Y	0.709	0.73
94_R	108_V	0.708	0.72
472_L	482_E	0.707	0.72
275_N	339_C	0.707	0.72
193_L	372_V	0.705	0.72
81_R	85_L	0.704	0.72
275_N	336_Y	0.704	0.72
418_N	511_E	0.703	0.72
489_R	537_I	0.703	0.72
290_I	325_I	0.702	0.72
333_I	359_A	0.702	0.72
454_S	522_A	0.701	0.72
461_W	495_N	0.700	0.72
287_P	325_I	0.700	0.72
485_R	510_Q	0.698	0.71
267_I	341_L	0.698	0.71
239_K	420_I	0.698	0.71
187_Y	240_Q	0.695	0.71
557_I	566_I	0.693	0.71
275_N	416_V	0.692	0.71
93_P	129_P	0.692	0.71
255_L	276_I	0.691	0.71
139_E	142_R	0.690	0.71
55_G	188_L	0.689	0.70
5_R	9_I	0.688	0.70
34_I	255_L	0.687	0.70
283_C	328_F	0.686	0.70
295_Q	302_K	0.684	0.70
498_V	527_V	0.684	0.70
143_V	197_A	0.682	0.70
310_D	313_L	0.681	0.70
487_I	495_N	0.681	0.70
98_A	103_L	0.679	0.69
482_E	487_I	0.674	0.69
167_L	196_Y	0.674	0.69
486_I	506_C	0.673	0.69
283_C	291_A	0.672	0.69
460_S	466_R	0.672	0.69
457_R	568_G	0.670	0.68
270_A	274_E	0.670	0.68
398_I	411_N	0.670	0.68
336_Y	343_R	0.668	0.68
188_L	192_I	0.665	0.68
115_L	135_I	0.665	0.68
166_N	200_N	0.664	0.68
523_Q	533_N	0.664	0.68
118_R	122_T	0.662	0.67
50_R	62_E	0.659	0.67
198_L	202_L	0.659	0.67
125_L	220_H	0.658	0.67
499_N	527_V	0.657	0.67
367_A	492_E	0.657	0.67
109_A	133_H	0.656	0.67
40_Y	43_F	0.656	0.67
574_A	577_E	0.656	0.67
173_A	176_N	0.652	0.66
450_S	518_F	0.652	0.66
492_E	495_N	0.651	0.66
13_L	41_L	0.650	0.66
350_P	397_L	0.650	0.66
287_P	328_F	0.649	0.66
369_E	377_V	0.649	0.66
536_L	554_L	0.648	0.66
511_E	575_F	0.644	0.65
471_Q	474_A	0.643	0.65
269_D	342_E	0.643	0.65
390_R	394_E	0.643	0.65
456_V	521_L	0.642	0.65
445_F	572_Y	0.642	0.65
471_Q	519_I	0.640	0.65
36_R	39_D	0.640	0.65
258_R	262_I	0.640	0.65
482_E	504_P	0.636	0.64
110_E	361_A	0.635	0.64
93_P	128_R	0.634	0.64
474_A	573_E	0.632	0.64
426_E	523_Q	0.632	0.64
79_D	101_L	0.631	0.64
135_I	212_D	0.631	0.64
41_L	178_H	0.630	0.64
349_Q	396_L	0.630	0.64
275_N	362_T	0.627	0.63
412_N	431_F	0.627	0.63
335_L	339_C	0.627	0.63
480_A	484_Q	0.626	0.63
297_S	332_L	0.624	0.63
534_H	537_I	0.624	0.63
352_I	361_A	0.622	0.63
61_L	480_A	0.622	0.63
515_R	539_C	0.621	0.62
92_T	97_L	0.621	0.62
540_A	551_F	0.620	0.62
347_E	363_I	0.619	0.62
214_I	223_L	0.619	0.62
83_L	135_I	0.618	0.62
301_L	319_L	0.618	0.62
229_A	232_T	0.618	0.62
200_N	203_T	0.617	0.62
287_P	327_L	0.616	0.62
489_R	506_C	0.616	0.62
368_I	428_I	0.615	0.62
377_V	395_P	0.614	0.62
367_A	420_I	0.614	0.62
256_L	312_S	0.612	0.61
20_P	24_A	0.612	0.61
93_P	109_A	0.611	0.61
386_L	407_D	0.608	0.61
467_Q	519_I	0.608	0.61
512_R	515_R	0.608	0.61
43_F	47_G	0.608	0.61
271_Q	275_N	0.608	0.61
239_K	291_A	0.607	0.61
10_V	122_T	0.606	0.61
275_N	340_A	0.606	0.61
86_L	191_L	0.605	0.60
93_P	130_G	0.604	0.60
441_P	553_Y	0.603	0.60
139_E	202_L	0.602	0.60
516_G	554_L	0.601	0.60
538_A	541_A	0.601	0.60
5_R	29_V	0.601	0.60
197_A	201_Q	0.600	0.60
386_L	406_L	0.600	0.60
260_P	268_I	0.597	0.59
262_I	315_F	0.596	0.59
540_A	548_L	0.596	0.59
287_P	331_D	0.596	0.59
109_A	127_S	0.596	0.59
461_W	528_N	0.594	0.59
101_L	108_V	0.594	0.59
132_G	357_Q	0.593	0.59
474_A	477_H	0.593	0.59
54_S	58_G	0.593	0.59
145_L	149_L	0.592	0.59
143_V	198_L	0.592	0.59
464_I	525_V	0.591	0.59
123_C	166_N	0.590	0.59
386_L	398_I	0.589	0.58
385_E	388_A	0.589	0.58
36_R	482_E	0.589	0.58
145_L	241_H	0.588	0.58
461_W	478_I	0.588	0.58
265_L	341_L	0.587	0.58
143_V	232_T	0.587	0.58
85_L	97_L	0.586	0.58
120_E	124_C	0.585	0.58
236_L	291_A	0.585	0.58
489_R	527_V	0.584	0.58
19_T	529_N	0.582	0.58
354_L	360_I	0.582	0.58
262_I	311_M	0.582	0.58
85_L	101_L	0.582	0.58
511_E	515_R	0.582	0.58
32_R	58_G	0.582	0.58
225_L	233_L	0.581	0.57
353_L	381_R	0.581	0.57
174_C	402_S	0.581	0.57
362_T	380_A	0.580	0.57
218_V	230_V	0.579	0.57
322_Q	325_I	0.576	0.57
30_S	260_P	0.576	0.57
175_D	188_L	0.575	0.57
61_L	75_K	0.574	0.56
279_H	301_L	0.573	0.56
493_G	507_W	0.572	0.56
129_P	350_P	0.572	0.56
272_L	275_N	0.572	0.56
214_I	217_I	0.571	0.56
464_I	471_Q	0.570	0.56
364_N	367_A	0.570	0.56
338_A	358_N	0.569	0.56
269_D	336_Y	0.568	0.56
236_L	336_Y	0.567	0.56
552_S	555_A	0.567	0.56
418_N	421_T	0.567	0.56
282_R	285_A	0.566	0.55
400_N	404_Y	0.566	0.55
226_G	236_L	0.565	0.55
18_R	254_G	0.565	0.55
293_H	333_I	0.565	0.55
485_R	493_G	0.564	0.55
114_R	117_Q	0.563	0.55
174_C	557_I	0.563	0.55
129_P	132_G	0.562	0.55
20_P	53_A	0.561	0.55
548_L	551_F	0.560	0.55
23_L	37_D	0.560	0.55
171_S	175_D	0.559	0.55
105_E	130_G	0.559	0.55
355_S	383_L	0.558	0.54
216_Q	219_E	0.558	0.54
86_L	103_L	0.557	0.54
425_I	429_K	0.557	0.54
236_L	239_K	0.556	0.54
534_H	575_F	0.555	0.54
110_E	113_P	0.555	0.54
350_P	377_V	0.555	0.54
496_L	530_E	0.554	0.54
327_L	512_R	0.554	0.54
478_I	511_E	0.554	0.54
9_I	195_I	0.554	0.54
368_I	455_N	0.553	0.54
208_Q	213_E	0.553	0.54
319_L	323_L	0.553	0.54
35_L	269_D	0.552	0.54
507_W	511_E	0.552	0.54
170_L	256_L	0.552	0.54
59_Y	572_Y	0.552	0.54
538_A	555_A	0.551	0.53
354_L	400_N	0.551	0.53
49_A	61_L	0.551	0.53
368_I	373_L	0.551	0.53
104_P	107_W	0.551	0.53
70_F	73_L	0.550	0.53
441_P	550_I	0.550	0.53
55_G	59_Y	0.550	0.53
493_G	547_E	0.550	0.53
22_E	26_Q	0.550	0.53
526_E	530_E	0.550	0.53
349_Q	379_I	0.549	0.53
351_I	389_I	0.549	0.53
305_W	367_A	0.548	0.53
378_I	395_P	0.548	0.53
42_N	49_A	0.548	0.53
90_T	403_H	0.547	0.53
214_I	233_L	0.547	0.53
8_K	12_L	0.546	0.53
315_F	337_F	0.546	0.53
260_P	267_I	0.546	0.53
239_K	286_A	0.546	0.53
439_Q	443_R	0.545	0.53
32_R	35_L	0.543	0.52
133_H	259_V	0.542	0.52
302_K	306_P	0.541	0.52
378_I	570_T	0.540	0.52
357_Q	402_S	0.540	0.52
210_P	218_V	0.540	0.52
461_W	489_R	0.539	0.52
34_I	175_D	0.538	0.52
38_I	53_A	0.538	0.52
431_F	434_T	0.538	0.52
351_I	378_I	0.538	0.52
541_A	544_A	0.537	0.52
4_E	7_L	0.537	0.52
421_T	443_R	0.536	0.51
13_L	59_Y	0.535	0.51
224_F	579_L	0.535	0.51
372_V	399_I	0.535	0.51
258_R	321_E	0.533	0.51
45_L	132_G	0.533	0.51
169_H	217_I	0.533	0.51
364_N	416_V	0.532	0.51
486_I	555_A	0.532	0.51
566_I	575_F	0.532	0.51
296_S	357_Q	0.532	0.51
503_I	516_G	0.531	0.51
455_N	524_P	0.531	0.51
184_Q	187_Y	0.531	0.51
520_T	575_F	0.530	0.51
486_I	495_N	0.530	0.51
565_I	574_A	0.529	0.51
524_P	531_V	0.528	0.50
463_H	467_Q	0.528	0.50
468_I	486_I	0.528	0.50
42_N	45_L	0.527	0.50
94_R	98_A	0.527	0.50
32_R	59_Y	0.526	0.50
31_G	135_I	0.526	0.50
266_N	269_D	0.526	0.50
416_V	493_G	0.526	0.50
547_E	551_F	0.526	0.50
470_A	473_V	0.526	0.50
20_P	35_L	0.526	0.50
8_K	207_P	0.526	0.50
283_C	293_H	0.525	0.50
263_A	511_E	0.525	0.50
323_L	328_F	0.525	0.50
286_A	289_W	0.525	0.50
87_L	216_Q	0.524	0.50
496_L	555_A	0.524	0.50
9_I	66_R	0.524	0.50
470_A	483_A	0.523	0.50
92_T	290_I	0.522	0.50
312_S	333_I	0.521	0.49
447_A	576_M	0.520	0.49
372_V	380_A	0.520	0.49
367_A	417_K	0.520	0.49
112_L	125_L	0.519	0.49
124_C	299_N	0.519	0.49
259_V	264_S	0.519	0.49
339_C	377_V	0.518	0.49
11_D	15_Q	0.517	0.49
17_P	52_F	0.517	0.49
9_I	27_T	0.517	0.49
103_L	308_A	0.517	0.49
23_L	29_V	0.517	0.49
286_A	290_I	0.516	0.49
514_F	544_A	0.516	0.49
408_D	412_N	0.516	0.49
521_L	535_V	0.516	0.49
144_I	507_W	0.515	0.49
94_R	133_H	0.515	0.49
142_R	363_I	0.514	0.49
298_M	309_F	0.514	0.49
305_W	332_L	0.514	0.49
236_L	282_R	0.514	0.49
170_L	195_I	0.514	0.49
137_E	141_K	0.513	0.48
196_Y	200_N	0.513	0.48
195_I	577_E	0.513	0.48
162_I	196_Y	0.512	0.48
112_L	177_Q	0.511	0.48
194_A	226_G	0.510	0.48
482_E	511_E	0.510	0.48
468_I	527_V	0.510	0.48
320_R	323_L	0.510	0.48
283_C	333_I	0.509	0.48
459_E	521_L	0.508	0.48
458_G	523_Q	0.508	0.48
226_G	235_G	0.508	0.48
301_L	305_W	0.507	0.48
186_D	190_S	0.507	0.48
298_M	302_K	0.506	0.48
128_R	132_G	0.506	0.48
364_N	402_S	0.506	0.48
108_V	436_F	0.505	0.47
168_Q	172_T	0.505	0.47
87_L	145_L	0.505	0.47
185_G	361_A	0.504	0.47
125_L	328_F	0.504	0.47
517_F	539_C	0.504	0.47
495_N	540_A	0.503	0.47
26_Q	219_E	0.503	0.47
338_A	355_S	0.503	0.47
450_S	454_S	0.503	0.47
318_L	322_Q	0.502	0.47
256_L	260_P	0.502	0.47
39_D	59_Y	0.501	0.47
116_K	360_I	0.500	0.47
139_E	197_A	0.500	0.47

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r6iA	2	0.7268	100	0.476	Contact Map
3sqnA	2	0.7165	100	0.509	Contact Map
1a6jA	4	0.256	99.9	0.784	Contact Map
3oxpA	2	0.2423	99.9	0.785	Contact Map
2oq3A	1	0.2423	99.9	0.789	Contact Map
3bjvA	2	0.244	99.9	0.789	Contact Map
2oqtA	2	0.244	99.9	0.789	Contact Map
1a3aA	2	0.2371	99.9	0.792	Contact Map
4m62S	1	0.2423	99.9	0.794	Contact Map
3urrA	2	0.2474	99.9	0.794	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0146 seconds.