GREMLIN Database
YDDA - Inner membrane ABC transporter ATP-binding protein YddA
UniProt: P31826 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11742
Length: 561 (515)
Sequences: 52631 (37075)
Seq/√Len: 1633.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
394_K553_D4.6841.00
371_D385_N4.6251.00
368_Q389_H4.5491.00
391_S394_K4.4501.00
370_A423_D4.2441.00
471_G481_D4.1691.00
442_G446_E4.1271.00
466_H471_G4.0111.00
445_K458_D3.9941.00
370_A425_S3.5331.00
366_A389_H3.4551.00
471_G475_A3.3961.00
369_V372_A3.2751.00
457_D460_S3.1761.00
445_K449_C3.1271.00
410_L541_V3.0131.00
458_D462_S2.9781.00
373_S385_N2.9481.00
381_I384_E2.8901.00
410_L509_F2.7891.00
429_D506_K2.7191.00
415_H418_P2.7091.00
463_E467_Q2.6371.00
368_Q425_S2.6021.00
448_I465_L2.5761.00
390_V396_L2.5421.00
366_A391_S2.5221.00
462_S471_G2.5131.00
504_R536_S2.4921.00
452_L460_S2.4561.00
445_K461_L2.4471.00
170_V174_E2.4451.00
431_W505_P2.4351.00
61_N309_G2.4221.00
375_R381_I2.4181.00
388_F555_C2.3101.00
462_S466_H2.3051.00
21_P350_Q2.3031.00
448_I461_L2.2781.00
373_S381_I2.2601.00
395_W551_A2.2481.00
470_L473_L2.2181.00
366_A392_P2.2131.00
61_N307_N2.2011.00
373_S421_K2.1951.00
369_V388_F2.1781.00
25_R110_Y2.1631.00
522_A544_Q2.1241.00
371_D387_N2.1121.00
452_L455_P2.1011.00
464_V468_V2.0891.00
365_H427_P2.0811.00
460_S504_R2.0731.00
530_R550_L2.0641.00
465_L481_D2.0621.00
390_V539_I2.0531.00
31_S106_W2.0501.00
462_S475_A2.0161.00
114_R353_E2.0051.00
375_R420_F1.9751.00
396_L553_D1.9591.00
463_E466_H1.8951.00
176_A300_Q1.8931.00
72_W76_L1.8811.00
226_S263_T1.8671.00
449_C461_L1.8491.00
449_C458_D1.8331.00
523_I527_R1.8301.00
445_K481_D1.8011.00
396_L555_C1.8001.00
467_Q531_E1.7831.00
346_Y350_Q1.7761.00
364_Q427_P1.7731.00
76_L80_A1.7661.00
517_L525_L1.7541.00
469_G524_R1.7341.00
465_L474_A1.7201.00
367_V539_I1.7031.00
448_I502_L1.6881.00
383_L386_L1.6811.00
27_N32_V1.6801.00
221_V343_D1.6691.00
397_L551_A1.6681.00
456_V502_L1.6561.00
143_D344_R1.6511.00
472_K475_A1.6421.00
249_A252_L1.6371.00
409_L557_I1.6271.00
398_L409_L1.6271.00
395_W540_M1.6251.00
366_A427_P1.6161.00
394_K552_D1.6031.00
460_S463_E1.5871.00
173_W180_S1.5821.00
459_K462_S1.5791.00
117_A353_E1.5621.00
465_L471_G1.5611.00
398_L555_C1.5481.00
542_T547_V1.5471.00
57_N313_K1.5191.00
229_T263_T1.5181.00
391_S553_D1.5011.00
73_Q77_W1.4851.00
374_I408_T1.4741.00
527_R531_E1.4701.00
114_R118_D1.4601.00
295_F299_P1.4551.00
460_S502_L1.4521.00
414_S432_Y1.4431.00
412_T424_I1.4411.00
449_C456_V1.4381.00
458_D461_L1.4331.00
233_N260_N1.4331.00
473_L491_E1.4311.00
363_C427_P1.4201.00
21_P346_Y1.4181.00
299_P303_S1.4141.00
53_N317_A1.4041.00
365_H392_P1.4001.00
531_E534_P1.3951.00
41_M88_I1.3861.00
374_I412_T1.3831.00
374_I417_W1.3801.00
372_A419_W1.3771.00
369_V413_L1.3761.00
253_Q450_K1.3641.00
431_W500_L1.3531.00
397_L548_W1.3501.00
401_Y558_S1.3471.00
444_L495_I1.3471.00
173_W177_G1.3411.00
222_E267_N1.3161.00
215_R218_P1.3141.00
452_L456_V1.3071.00
114_R349_H1.3021.00
370_A387_N1.2991.00
459_K463_E1.2941.00
469_G521_E1.2891.00
207_L211_K1.2861.00
468_V498_A1.2761.00
226_S267_N1.2731.00
396_L539_I1.2681.00
402_S521_E1.2681.00
465_L470_L1.2671.00
373_S384_E1.2641.00
470_L474_A1.2621.00
475_A480_H1.2521.00
226_S229_T1.2501.00
467_Q501_I1.2491.00
413_L539_I1.2381.00
366_A428_A1.2371.00
172_L314_S1.2341.00
462_S465_L1.2341.00
476_R491_E1.2321.00
457_D502_L1.2281.00
493_Q515_S1.2241.00
50_V167_T1.2241.00
533_L538_V1.2231.00
392_P506_K1.2191.00
386_L409_L1.2121.00
371_D421_K1.1961.00
179_L314_S1.1931.00
69_D73_Q1.1861.00
464_V501_I1.1851.00
251_S255_Q1.1821.00
255_Q259_D1.1801.00
473_L477_I1.1801.00
245_A250_E1.1791.00
262_H266_E1.1781.00
390_V537_G1.1771.00
388_F409_L1.1751.00
300_Q305_Q1.1751.00
237_H253_Q1.1731.00
109_D113_N1.1731.00
307_N310_G1.1681.00
487_L495_I1.1661.00
240_Q438_L1.1641.00
57_N61_N1.1611.00
364_Q392_P1.1571.00
44_G88_I1.1571.00
462_S481_D1.1541.00
124_T417_W1.1341.00
369_V424_I1.1321.00
381_I420_F1.1311.00
98_L102_R1.1301.00
500_L508_I1.1171.00
395_W538_V1.1101.00
177_G181_F1.1081.00
257_L261_F1.1061.00
114_R117_A1.1061.00
132_N135_N1.1031.00
542_T548_W1.1011.00
135_N228_A1.1011.00
178_T305_Q1.0941.00
55_W74_L1.0861.00
111_Y348_F1.0861.00
131_K135_N1.0861.00
433_V500_L1.0841.00
297_L311_L1.0801.00
467_Q532_K1.0781.00
113_N117_A1.0721.00
253_Q256_E1.0721.00
296_L300_Q1.0711.00
469_G528_L1.0681.00
54_D58_D1.0671.00
458_D481_D1.0661.00
36_I40_A1.0651.00
402_S494_R1.0641.00
512_E543_H1.0601.00
124_T411_K1.0581.00
367_V413_L1.0571.00
412_T419_W1.0551.00
369_V409_L1.0541.00
229_T260_N1.0521.00
146_L341_V1.0521.00
367_V426_S1.0511.00
259_D263_T1.0491.00
399_K556_D1.0461.00
472_K476_R1.0461.00
342_I346_Y1.0461.00
219_L270_R1.0451.00
456_V460_S1.0431.00
24_L27_N1.0421.00
372_A412_T1.0401.00
270_R273_N1.0391.00
464_V502_L1.0381.00
376_T382_I1.0381.00
506_K536_S1.0351.00
41_M91_N1.0341.00
508_I536_S1.0341.00
166_I170_V1.0331.00
540_M551_A1.0321.00
244_I253_Q1.0301.00
265_K269_H1.0291.00
32_V36_I1.0271.00
201_I289_L1.0251.00
34_L98_L1.0221.00
437_P496_A1.0221.00
446_E449_C1.0221.00
397_L542_T1.0171.00
407_T411_K1.0061.00
489_S494_R1.0051.00
469_G531_E1.0011.00
80_A84_I0.9991.00
368_Q387_N0.9961.00
368_Q428_A0.9951.00
301_F306_I0.9941.00
38_I96_I0.9921.00
469_G527_R0.9901.00
57_N310_G0.9891.00
256_E260_N0.9881.00
110_Y114_R0.9871.00
143_D341_V0.9841.00
544_Q547_V0.9831.00
249_A253_Q0.9821.00
211_K215_R0.9811.00
106_W110_Y0.9811.00
33_L37_I0.9811.00
119_K354_Q0.9801.00
445_K462_S0.9771.00
222_E226_S0.9771.00
215_R274_R0.9761.00
233_N256_E0.9761.00
181_F200_L0.9741.00
41_M95_L0.9731.00
463_E504_R0.9681.00
28_N106_W0.9661.00
28_N32_V0.9661.00
375_R382_I0.9651.00
524_R527_R0.9631.00
362_N427_P0.9601.00
497_L510_L0.9601.00
258_S262_H0.9591.00
385_N421_K0.9551.00
397_L554_I0.9541.00
426_S507_W0.9531.00
381_I421_K0.9531.00
464_V498_A0.9491.00
221_V225_R0.9481.00
252_L256_E0.9471.00
466_H475_A0.9411.00
461_L502_L0.9371.00
448_I495_I0.9371.00
419_W424_I0.9301.00
105_E109_D0.9291.00
73_Q76_L0.9291.00
377_P380_K0.9281.00
139_R347_E0.9231.00
58_D62_A0.9231.00
375_R379_N0.9221.00
520_Q524_R0.9211.00
219_L267_N0.9201.00
262_H265_K0.9171.00
298_L302_I0.9161.00
395_W530_R0.9161.00
263_T267_N0.9151.00
122_Y131_K0.9131.00
242_E411_K0.9121.00
222_E270_R0.9081.00
208_F281_W0.9061.00
175_S310_G0.9061.00
339_A343_D0.9051.00
392_P427_P0.9051.00
111_Y140_I0.9041.00
360_P363_C0.9031.00
395_W533_L0.9031.00
433_V497_L0.9021.00
31_S102_R0.8991.00
514_T525_L0.8971.00
355_R418_P0.8971.00
439_I495_I0.8961.00
200_L203_I0.8891.00
404_A557_I0.8891.00
414_S430_S0.8871.00
414_S509_F0.8861.00
440_K447_I0.8851.00
419_W423_D0.8831.00
470_L495_I0.8831.00
470_L476_R0.8801.00
25_R28_N0.8781.00
467_Q471_G0.8761.00
169_T180_S0.8741.00
373_S420_F0.8741.00
121_Y354_Q0.8741.00
439_I492_K0.8731.00
508_I533_L0.8681.00
111_Y345_L0.8651.00
505_P536_S0.8621.00
300_Q303_S0.8621.00
114_R352_T0.8571.00
526_L542_T0.8551.00
48_I84_I0.8551.00
172_L180_S0.8551.00
197_T296_L0.8541.00
223_K268_W0.8521.00
176_A180_S0.8521.00
218_P222_E0.8471.00
255_Q258_S0.8471.00
206_T210_H0.8471.00
254_R258_S0.8461.00
252_L255_Q0.8461.00
21_P24_L0.8451.00
48_I88_I0.8431.00
443_L446_E0.8421.00
215_R219_L0.8411.00
251_S254_R0.8391.00
449_C455_P0.8371.00
38_I99_L0.8351.00
375_R378_D0.8351.00
171_I175_S0.8331.00
243_L247_S0.8311.00
28_N31_S0.8311.00
367_V507_W0.8301.00
118_D351_L0.8281.00
370_A389_H0.8281.00
526_L547_V0.8271.00
256_E259_D0.8261.00
210_H214_K0.8261.00
468_V494_R0.8251.00
477_I487_L0.8241.00
42_I160_Q0.8211.00
449_C452_L0.8211.00
87_L91_N0.8211.00
135_N139_R0.8201.00
365_H537_G0.8191.00
489_S516_H0.8171.00
178_T181_F0.8171.00
522_A526_L0.8161.00
174_E177_G0.8141.00
545_P556_D0.8141.00
136_P348_F0.8131.00
301_F311_L0.8131.00
74_L77_W0.8071.00
267_N270_R0.8071.00
260_N263_T0.8041.00
44_G84_I0.8031.00
48_I81_L0.8011.00
58_D61_N0.7981.00
40_A44_G0.7971.00
70_K73_Q0.7961.00
508_I538_V0.7961.00
514_T522_A0.7951.00
240_Q243_L0.7951.00
55_W81_L0.7931.00
345_L349_H0.7911.00
58_D74_L0.7911.00
47_K51_W0.7911.00
402_S512_E0.7901.00
425_S428_A0.7891.00
226_S260_N0.7851.00
178_T300_Q0.7841.00
119_K355_R0.7831.00
61_N64_S0.7821.00
399_K545_P0.7821.00
263_T266_E0.7821.00
284_I288_S0.7801.00
121_Y130_H0.7801.00
150_K338_L0.7781.00
67_E70_K0.7781.00
444_L474_A0.7771.00
75_V79_P0.7771.00
309_G313_K0.7771.00
473_L476_R0.7761.00
269_H273_N0.7741.00
436_T492_K0.7741.00
393_G537_G0.7721.00
230_F264_I0.7691.00
34_L95_L0.7691.00
46_V163_S0.7681.00
241_A245_A0.7681.00
493_Q516_H0.7681.00
362_N506_K0.7671.00
90_V94_W0.7671.00
76_L79_P0.7661.00
62_A70_K0.7621.00
171_I174_E0.7611.00
60_F312_M0.7601.00
161_S327_W0.7601.00
54_D171_I0.7591.00
34_L102_R0.7581.00
63_L66_K0.7581.00
222_E225_R0.7571.00
214_K218_P0.7531.00
430_S507_W0.7531.00
146_L337_E0.7481.00
55_W77_W0.7481.00
266_E270_R0.7431.00
139_R143_D0.7411.00
115_W123_F0.7411.00
118_D353_E0.7391.00
77_W80_A0.7391.00
84_I88_I0.7381.00
37_I95_L0.7371.00
54_D57_N0.7371.00
494_R521_E0.7361.00
469_G472_K0.7361.00
62_A65_Q0.7351.00
113_N254_R0.7351.00
168_F320_L0.7341.00
525_L528_L0.7331.00
176_A306_I0.7321.00
460_S464_V0.7321.00
376_T408_T0.7311.00
352_T356_P0.7311.00
467_Q528_L0.7301.00
23_W26_K0.7281.00
452_L503_R0.7281.00
411_K417_W0.7271.00
383_L557_I0.7271.00
110_Y113_N0.7271.00
364_Q537_G0.7261.00
458_D465_L0.7241.00
167_T170_V0.7201.00
369_V386_L0.7201.00
393_G535_T0.7181.00
170_V173_W0.7171.00
180_S314_S0.7151.00
548_W551_A0.7151.00
355_R415_H0.7141.00
475_A481_D0.7141.00
343_D347_E0.7141.00
461_L481_D0.7121.00
168_F321_V0.7121.00
83_G87_L0.7101.00
297_L301_F0.7091.00
175_S313_K0.7081.00
452_L504_R0.7061.00
300_Q304_G0.7061.00
162_L166_I0.7061.00
120_N124_T0.7051.00
111_Y349_H0.7041.00
390_V394_K0.7031.00
143_D224_Q0.7031.00
31_S34_L0.7021.00
104_R148_I0.7011.00
176_A179_L0.6981.00
104_R108_T0.6971.00
441_T486_I0.6961.00
138_Q231_R0.6961.00
110_Y349_H0.6961.00
410_L539_I0.6961.00
207_L210_H0.6951.00
462_S474_A0.6941.00
150_K335_L0.6931.00
358_N361_K0.6931.00
132_N232_T0.6841.00
374_I382_I0.6841.00
70_K74_L0.6821.00
509_F539_I0.6811.00
224_Q227_E0.6811.00
384_E559_A0.6801.00
338_L341_V0.6801.00
517_L521_E0.6801.00
436_T483_W0.6801.00
283_N326_S0.6781.00
177_G180_S0.6771.00
33_L36_I0.6771.00
147_L342_I0.6771.00
51_W81_L0.6761.00
395_W550_L0.6751.00
111_Y144_I0.6751.00
497_L501_I0.6741.00
398_L539_I0.6741.00
158_F162_L0.6741.00
465_L498_A0.6741.00
54_D175_S0.6731.00
107_L144_I0.6721.00
412_T417_W0.6721.00
522_A547_V0.6711.00
36_I39_L0.6701.00
102_R105_E0.6701.00
474_A481_D0.6691.00
61_N65_Q0.6671.00
522_A546_G0.6661.00
427_P506_K0.6641.00
468_V497_L0.6641.00
228_A344_R0.6631.00
518_E521_E0.6631.00
288_S292_L0.6601.00
114_R351_L0.6581.00
22_F25_R0.6561.00
468_V501_I0.6551.00
494_R517_L0.6541.00
50_V53_N0.6541.00
105_E261_F0.6541.00
488_S491_E0.6531.00
390_V395_W0.6511.00
469_G525_L0.6511.00
296_L299_P0.6511.00
135_N344_R0.6501.00
365_H506_K0.6501.00
219_L222_E0.6491.00
449_C465_L0.6481.00
270_R274_R0.6481.00
173_W199_V0.6481.00
142_E145_L0.6471.00
519_E522_A0.6471.00
463_E532_K0.6471.00
372_A422_G0.6461.00
168_F317_A0.6451.00
391_S396_L0.6451.00
435_Q489_S0.6431.00
224_Q340_A0.6431.00
72_W75_V0.6431.00
526_L540_M0.6401.00
23_W27_N0.6401.00
272_M276_R0.6401.00
461_L464_V0.6401.00
208_F285_Y0.6381.00
363_C429_D0.6371.00
323_N327_W0.6361.00
466_H472_K0.6361.00
452_L457_D0.6351.00
375_R421_K0.6351.00
372_A387_N0.6351.00
69_D72_W0.6341.00
306_I310_G0.6341.00
298_L301_F0.6341.00
497_L525_L0.6331.00
179_L300_Q0.6331.00
107_L147_L0.6331.00
386_L555_C0.6331.00
220_N271_L0.6321.00
45_V89_S0.6321.00
31_S103_W0.6311.00
528_L531_E0.6301.00
507_W537_G0.6291.00
97_K153_S0.6281.00
526_L550_L0.6251.00
138_Q228_A0.6231.00
199_V203_I0.6221.00
372_A424_I0.6211.00
410_L432_Y0.6201.00
381_I385_N0.6181.00
465_L468_V0.6161.00
266_E269_H0.6161.00
471_G474_A0.6161.00
138_Q227_E0.6151.00
147_L345_L0.6151.00
545_P550_L0.6151.00
212_V278_L0.6151.00
375_R380_K0.6141.00
501_I532_K0.6141.00
42_I92_K0.6131.00
431_W503_R0.6111.00
433_V510_L0.6071.00
149_S153_S0.6071.00
88_I91_N0.6041.00
122_Y136_P0.6041.00
222_E263_T0.6031.00
399_K548_W0.6021.00
79_P83_G0.6011.00
444_L470_L0.6011.00
358_N362_N0.6001.00
219_L271_L0.6001.00
100_T152_L0.5991.00
178_T296_L0.5991.00
54_D313_K0.5981.00
527_R530_R0.5981.00
452_L502_L0.5981.00
391_S537_G0.5971.00
363_C392_P0.5971.00
225_R229_T0.5951.00
44_G48_I0.5951.00
243_L246_L0.5951.00
527_R550_L0.5951.00
378_D420_F0.5941.00
157_G327_W0.5941.00
449_C502_L0.5921.00
292_L296_L0.5881.00
402_S517_L0.5871.00
382_I386_L0.5871.00
203_I207_L0.5871.00
395_W535_T0.5861.00
91_N95_L0.5861.00
149_S334_E0.5861.00
165_L169_T0.5851.00
472_K491_E0.5841.00
368_Q423_D0.5841.00
57_N309_G0.5841.00
545_P548_W0.5831.00
434_S437_P0.5831.00
390_V555_C0.5821.00
461_L465_L0.5801.00
411_K432_Y0.5791.00
533_L536_S0.5791.00
521_E525_L0.5781.00
507_W539_I0.5781.00
363_C426_S0.5771.00
160_Q164_M0.5771.00
119_K122_Y0.5771.00
169_T173_W0.5761.00
341_V344_R0.5751.00
306_I311_L0.5751.00
226_S264_I0.5731.00
144_I345_L0.5731.00
373_S383_L0.5721.00
402_S542_T0.5721.00
94_W98_L0.5721.00
287_R291_V0.5721.00
112_L116_F0.5721.00
302_I305_Q0.5711.00
490_G518_E0.5691.00
384_E387_N0.5681.00
297_L300_Q0.5681.00
101_I104_R0.5681.00
408_T417_W0.5651.00
448_I451_A0.5641.00
121_Y377_P0.5641.00
244_I250_E0.5641.00
120_N416_C0.5631.00
55_W78_F0.5631.00
447_I495_I0.5631.00
540_M548_W0.5621.00
204_G207_L0.5601.00
133_T137_D0.5601.00
21_P25_R0.5591.00
227_E231_R0.5591.00
134_D232_T0.5581.00
138_Q142_E0.5571.00
34_L99_L0.5571.00
398_L541_V0.5571.00
161_S165_L0.5571.00
97_K101_I0.5551.00
519_E546_G0.5551.00
433_V513_T0.5551.00
459_K466_H0.5551.00
198_V318_F0.5541.00
528_L532_K0.5541.00
299_P302_I0.5521.00
228_A340_A0.5501.00
223_K271_L0.5481.00
140_I144_I0.5481.00
77_W81_L0.5471.00
510_L513_T0.5471.00
211_K214_K0.5471.00
233_N237_H0.5471.00
369_V412_T0.5461.00
123_F131_K0.5461.00
494_R516_H0.5461.00
456_V461_L0.5441.00
514_T517_L0.5441.00
174_E178_T0.5421.00
378_D381_I0.5421.00
407_T410_L0.5421.00
468_V528_L0.5401.00
389_H392_P0.5401.00
532_K535_T0.5391.00
45_V88_I0.5381.00
156_F159_I0.5371.00
363_C366_A0.5371.00
542_T550_L0.5361.00
398_L557_I0.5351.00
513_T540_M0.5341.00
276_R280_Y0.5341.00
545_P554_I0.5341.00
171_I317_A0.5331.00
542_T546_G0.5331.00
71_L75_V0.5331.00
142_E224_Q0.5331.00
240_Q440_K0.5321.00
445_K502_L0.5321.00
229_T232_T0.5311.00
86_V90_V0.5301.00
501_I528_L0.5301.00
145_L148_I0.5301.00
204_G208_F0.5301.00
367_V390_V0.5291.00
547_V551_A0.5291.00
116_F119_K0.5281.00
230_F234_L0.5281.00
235_V239_K0.5271.00
139_R344_R0.5271.00
521_E524_R0.5271.00
25_R107_L0.5261.00
115_W136_P0.5261.00
219_L274_R0.5251.00
532_K536_S0.5251.00
539_I555_C0.5251.00
167_T317_A0.5251.00
130_H377_P0.5241.00
513_T542_T0.5241.00
386_L557_I0.5241.00
444_L477_I0.5231.00
233_N253_Q0.5231.00
21_P27_N0.5231.00
59_F74_L0.5221.00
490_G494_R0.5221.00
38_I95_L0.5221.00
373_S387_N0.5211.00
259_D262_H0.5211.00
52_L56_N0.5201.00
49_Q85_F0.5201.00
34_L38_I0.5201.00
410_L414_S0.5201.00
39_L42_I0.5191.00
22_F26_K0.5191.00
465_L475_A0.5191.00
408_T412_T0.5181.00
55_W58_D0.5181.00
176_A181_F0.5171.00
351_L354_Q0.5171.00
451_A456_V0.5171.00
101_I105_E0.5161.00
46_V50_V0.5161.00
45_V49_Q0.5151.00
264_I268_W0.5151.00
362_N365_H0.5131.00
104_R144_I0.5131.00
365_H507_W0.5131.00
130_H351_L0.5131.00
131_K136_P0.5131.00
291_V295_F0.5131.00
352_T355_R0.5121.00
161_S328_F0.5111.00
266_E273_N0.5101.00
493_Q514_T0.5071.00
547_V550_L0.5061.00
118_D348_F0.5051.00
124_T242_E0.5051.00
468_V473_L0.5051.00
206_T209_T0.5051.00
161_S164_M0.5041.00
484_G492_K0.5041.00
540_M550_L0.5041.00
118_D122_Y0.5031.00
203_I206_T0.5031.00
400_G406_K0.5021.00
93_T97_K0.5021.00
42_I46_V0.5021.00
474_A478_H0.5011.00
115_W348_F0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ry2A 2 0.943 100 0.144 Contact Map
4a82A 2 0.9287 100 0.175 Contact Map
4q4hB 1 0.9465 100 0.198 Contact Map
3b60A 2 0.934 100 0.208 Contact Map
3b5xA 2 0.934 100 0.209 Contact Map
4q9hA 1 0.9376 100 0.216 Contact Map
3zdqA 2 0.9358 100 0.221 Contact Map
4q4hA 1 0.9323 100 0.223 Contact Map
4mrsA 2 0.9501 100 0.229 Contact Map
3wmgA 1 0.934 100 0.233 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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