YIDJ - ECOLI - GREMLIN Contacts

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YIDJ - Uncharacterized sulfatase YidJ

UniProt:	P31447	Sequences: MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11705
Length:	497 (403)
Sequences:	9558 (7488)
Seq/√Len:	373.0

ECOLI - YIDJ YDEN ASLA
BACSU - YQGS LTAS2 YVGJ LTAS1
HALSA - Q9HSV3 Q9HQ44 Q9HQQ2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
337_A	351_N	4.977	1.00
270_T	274_R	4.948	1.00
175_Q	268_A	4.034	1.00
38_E	313_R	3.928	1.00
388_D	405_R	3.861	1.00
167_S	190_Y	3.382	1.00
267_N	271_P	3.249	1.00
31_N	263_G	3.199	1.00
388_D	403_D	3.173	1.00
67_Q	348_P	3.022	1.00
11_T	14_Q	2.961	1.00
41_R	321_Q	2.940	1.00
403_D	406_N	2.833	1.00
423_V	426_K	2.776	1.00
390_K	410_E	2.707	1.00
203_Y	260_D	2.697	1.00
201_V	205_E	2.639	1.00
314_S	317_G	2.633	1.00
45_A	326_V	2.574	1.00
268_A	271_P	2.574	1.00
20_G	33_D	2.569	1.00
171_V	268_A	2.451	1.00
168_N	264_R	2.399	1.00
169_R	172_D	2.329	1.00
170_A	186_M	2.326	1.00
386_T	426_K	2.308	1.00
386_T	430_A	2.248	1.00
91_A	341_I	2.242	1.00
43_N	323_D	2.240	1.00
338_L	353_L	2.189	1.00
6_F	339_A	2.139	1.00
207_Y	256_D	2.112	1.00
266_I	279_V	2.105	1.00
326_V	352_I	2.087	1.00
266_I	274_R	2.082	1.00
7_L	279_V	2.073	1.00
43_N	321_Q	2.072	1.00
40_I	322_V	2.062	1.00
336_M	341_I	2.049	1.00
415_I	424_R	2.031	1.00
9_V	262_I	2.028	1.00
367_R	430_A	2.019	1.00
6_F	88_F	1.971	1.00
337_A	353_L	1.968	1.00
21_C	41_R	1.964	1.00
14_Q	281_Y	1.940	1.00
274_R	313_R	1.913	1.00
89_K	121_D	1.893	1.00
84_M	185_L	1.880	1.00
98_I	186_M	1.879	1.00
206_K	256_D	1.878	1.00
40_I	320_R	1.874	1.00
10_M	282_T	1.841	1.00
11_T	281_Y	1.818	1.00
63_I	81_I	1.813	1.00
22_Y	41_R	1.791	1.00
278_W	312_I	1.790	1.00
172_D	176_Q	1.787	1.00
188_V	265_V	1.772	1.00
278_W	338_L	1.762	1.00
94_H	182_E	1.756	1.00
280_I	335_M	1.750	1.00
35_L	311_I	1.711	1.00
414_L	420_F	1.707	1.00
353_L	357_E	1.699	1.00
32_I	281_Y	1.689	1.00
34_S	270_T	1.688	1.00
333_P	349_G	1.682	1.00
280_I	312_I	1.674	1.00
44_S	385_V	1.659	1.00
96_C	173_F	1.656	1.00
261_Q	264_R	1.648	1.00
302_Y	400_E	1.644	1.00
171_V	264_R	1.644	1.00
39_G	311_I	1.639	1.00
34_S	38_E	1.635	1.00
55_A	328_H	1.635	1.00
190_Y	261_Q	1.635	1.00
11_T	258_V	1.625	1.00
170_A	188_V	1.598	1.00
31_N	34_S	1.598	1.00
391_L	428_H	1.596	1.00
82_S	90_D	1.591	1.00
97_Y	187_V	1.590	1.00
35_L	262_I	1.572	1.00
184_F	273_Q	1.564	1.00
420_F	423_V	1.556	1.00
424_R	428_H	1.522	1.00
400_E	413_N	1.521	1.00
331_L	335_M	1.513	1.00
175_Q	271_P	1.512	1.00
167_S	265_V	1.510	1.00
167_S	171_V	1.494	1.00
28_N	256_D	1.493	1.00
46_Y	306_T	1.492	1.00
7_L	184_F	1.477	1.00
167_S	261_Q	1.463	1.00
8_F	280_I	1.447	1.00
7_L	269_L	1.446	1.00
94_H	177_P	1.445	1.00
332_L	347_L	1.432	1.00
389_F	423_V	1.422	1.00
164_H	261_Q	1.389	1.00
29_T	33_D	1.388	1.00
5_N	184_F	1.374	1.00
87_Y	332_L	1.366	1.00
21_C	33_D	1.350	1.00
303_D	385_V	1.348	1.00
42_F	310_L	1.347	1.00
193_P	255_N	1.344	1.00
273_Q	276_N	1.340	1.00
14_Q	255_N	1.331	1.00
290_G	293_K	1.324	1.00
416_D	424_R	1.318	1.00
367_R	386_T	1.312	1.00
202_E	260_D	1.306	1.00
317_G	357_E	1.301	1.00
274_R	279_V	1.298	1.00
47_T	308_I	1.291	1.00
389_F	420_F	1.289	1.00
96_C	186_M	1.287	1.00
45_A	310_L	1.281	1.00
161_T	257_F	1.279	1.00
8_F	282_T	1.275	1.00
278_W	314_S	1.271	1.00
384_W	430_A	1.270	1.00
204_L	253_A	1.262	1.00
205_E	208_A	1.258	1.00
64_Y	329_I	1.247	1.00
63_I	346_I	1.245	1.00
14_Q	193_P	1.240	1.00
141_W	144_G	1.232	1.00
20_G	29_T	1.231	1.00
28_N	207_Y	1.219	1.00
430_A	433_D	1.216	1.00
386_T	427_M	1.210	1.00
390_K	404_R	1.209	1.00
426_K	430_A	1.208	1.00
47_T	55_A	1.195	1.00
35_L	313_R	1.182	1.00
164_H	257_F	1.181	1.00
203_Y	256_D	1.173	1.00
35_L	39_G	1.169	1.00
209_D	249_P	1.168	1.00
429_D	433_D	1.166	1.00
9_V	265_V	1.155	1.00
391_L	427_M	1.148	1.00
3_R	91_A	1.146	1.00
163_A	192_E	1.145	1.00
421_A	425_S	1.141	1.00
8_F	185_L	1.136	1.00
391_L	424_R	1.129	1.00
10_M	59_L	1.127	1.00
38_E	274_R	1.121	1.00
314_S	338_L	1.114	1.00
122_Y	176_Q	1.109	1.00
87_Y	336_M	1.106	1.00
31_N	267_N	1.104	1.00
256_D	260_D	1.098	1.00
166_I	188_V	1.097	1.00
28_N	206_K	1.096	1.00
16_T	307_R	1.095	1.00
190_Y	258_V	1.089	1.00
434_Y	437_K	1.086	1.00
88_F	335_M	1.086	1.00
262_I	266_I	1.085	1.00
384_W	391_L	1.084	1.00
142_R	169_R	1.082	1.00
46_Y	303_D	1.081	1.00
162_W	166_I	1.072	1.00
53_T	70_P	1.072	1.00
173_F	177_P	1.069	1.00
303_D	307_R	1.067	1.00
269_L	279_V	1.065	1.00
48_C	327_S	1.060	1.00
269_L	274_R	1.049	1.00
34_S	267_N	1.048	1.00
36_A	41_R	1.046	1.00
34_S	266_I	1.044	1.00
303_D	390_K	1.039	1.00
425_S	429_D	1.038	1.00
86_R	118_W	1.037	1.00
200_P	203_Y	1.035	1.00
42_F	355_V	1.035	1.00
7_L	186_M	1.033	1.00
388_D	423_V	1.031	1.00
66_N	371_E	1.031	1.00
7_L	277_T	1.029	1.00
401_L	423_V	1.024	1.00
389_F	401_L	1.021	1.00
174_L	265_V	1.019	1.00
38_E	318_E	1.017	1.00
4_P	276_N	1.017	1.00
88_F	341_I	1.016	1.00
171_V	175_Q	1.007	1.00
425_S	428_H	1.004	1.00
6_F	335_M	1.004	1.00
87_Y	90_D	1.000	1.00
401_L	424_R	0.998	1.00
27_L	252_F	0.994	1.00
82_S	86_R	0.993	1.00
97_Y	189_S	0.989	1.00
208_A	249_P	0.985	1.00
257_F	261_Q	0.985	1.00
200_P	257_F	0.983	1.00
370_I	383_C	0.983	1.00
5_N	277_T	0.979	1.00
16_T	22_Y	0.979	1.00
322_V	355_V	0.974	1.00
28_N	210_F	0.961	1.00
399_D	428_H	0.960	1.00
58_G	329_I	0.957	1.00
24_G	252_F	0.953	1.00
38_E	270_T	0.950	1.00
8_F	59_L	0.949	1.00
389_F	414_L	0.943	1.00
310_L	331_L	0.943	1.00
266_I	313_R	0.942	1.00
32_I	262_I	0.940	1.00
204_L	250_L	0.936	1.00
82_S	87_Y	0.935	1.00
14_Q	19_V	0.934	1.00
10_M	189_S	0.934	1.00
389_F	403_D	0.931	1.00
46_Y	385_V	0.929	1.00
272_E	275_E	0.925	1.00
201_V	204_L	0.924	1.00
4_P	314_S	0.922	1.00
32_I	311_I	0.916	1.00
40_I	318_E	0.908	1.00
428_H	432_L	0.906	1.00
174_L	268_A	0.905	1.00
98_I	122_Y	0.897	1.00
58_G	68_S	0.894	1.00
310_L	326_V	0.894	1.00
34_S	37_A	0.893	1.00
136_K	139_S	0.893	1.00
421_A	424_R	0.890	1.00
5_N	273_Q	0.890	1.00
21_C	36_A	0.885	1.00
301_M	383_C	0.885	1.00
58_G	65_A	0.884	1.00
430_A	434_Y	0.884	1.00
423_V	427_M	0.881	1.00
63_I	68_S	0.881	1.00
63_I	67_Q	0.881	1.00
355_V	363_V	0.880	1.00
33_D	37_A	0.880	1.00
52_C	56_R	0.877	1.00
88_F	185_L	0.874	1.00
13_T	287_E	0.874	1.00
167_S	264_R	0.872	1.00
88_F	339_A	0.872	1.00
84_M	332_L	0.870	1.00
382_R	393_L	0.863	1.00
87_Y	91_A	0.856	1.00
386_T	423_V	0.852	1.00
393_L	428_H	0.851	1.00
268_A	273_Q	0.848	1.00
96_C	122_Y	0.845	1.00
350_E	364_E	0.843	1.00
6_F	278_W	0.841	1.00
322_V	325_P	0.841	1.00
184_F	277_T	0.841	1.00
199_C	253_A	0.840	1.00
94_H	180_A	0.840	1.00
202_E	205_E	0.840	1.00
9_V	279_V	0.838	1.00
384_W	434_Y	0.837	1.00
172_D	175_Q	0.836	1.00
199_C	204_L	0.831	1.00
401_L	427_M	0.831	1.00
327_S	368_Y	0.830	1.00
267_N	270_T	0.828	1.00
123_W	126_G	0.826	1.00
35_L	266_I	0.824	1.00
260_D	264_R	0.823	1.00
93_Y	339_A	0.823	1.00
44_S	307_R	0.821	1.00
6_F	338_L	0.817	1.00
19_V	29_T	0.816	1.00
384_W	431_L	0.816	1.00
73_N	76_A	0.813	1.00
57_A	70_P	0.813	1.00
205_E	253_A	0.812	1.00
36_A	311_I	0.808	1.00
216_E	409_N	0.808	1.00
270_T	313_R	0.806	1.00
283_S	308_I	0.805	1.00
163_A	261_Q	0.803	1.00
19_V	22_Y	0.802	1.00
94_H	173_F	0.799	1.00
177_P	180_A	0.798	1.00
42_F	356_K	0.795	1.00
124_F	169_R	0.794	1.00
279_V	313_R	0.793	1.00
77_P	83_T	0.791	1.00
160_F	165_R	0.791	1.00
265_V	268_A	0.788	1.00
264_R	267_N	0.788	1.00
60_F	187_V	0.787	1.00
171_V	265_V	0.786	1.00
24_G	27_L	0.786	1.00
27_L	256_D	0.783	1.00
13_T	285_H	0.779	1.00
8_F	335_M	0.776	1.00
382_R	431_L	0.776	1.00
383_C	392_V	0.775	1.00
238_S	241_G	0.774	1.00
19_V	32_I	0.773	1.00
64_Y	327_S	0.772	1.00
48_C	58_G	0.772	1.00
4_P	93_Y	0.771	1.00
168_N	171_V	0.771	1.00
47_T	328_H	0.771	1.00
192_E	258_V	0.769	1.00
164_H	200_P	0.769	1.00
249_P	253_A	0.768	1.00
60_F	103_L	0.768	1.00
325_P	368_Y	0.765	1.00
160_F	168_N	0.764	1.00
295_I	298_G	0.763	1.00
165_R	169_R	0.763	1.00
45_A	328_H	0.762	1.00
306_T	370_I	0.761	1.00
363_V	366_N	0.760	1.00
301_M	392_V	0.758	1.00
266_I	270_T	0.751	1.00
404_R	410_E	0.749	1.00
98_I	173_F	0.748	1.00
8_F	331_L	0.747	1.00
344_P	347_L	0.745	1.00
122_Y	142_R	0.741	1.00
385_V	388_D	0.741	1.00
429_D	432_L	0.740	1.00
391_L	399_D	0.738	1.00
312_I	356_K	0.736	1.00
87_Y	341_I	0.736	1.00
414_L	423_V	0.733	1.00
4_P	278_W	0.733	1.00
85_G	88_F	0.733	1.00
199_C	250_L	0.732	1.00
332_L	336_M	0.732	1.00
57_A	68_S	0.731	1.00
29_T	255_N	0.731	1.00
333_P	347_L	0.731	1.00
401_L	414_L	0.730	1.00
168_N	172_D	0.725	1.00
336_M	343_K	0.724	1.00
18_M	251_Y	0.724	1.00
237_P	241_G	0.722	1.00
163_A	190_Y	0.722	1.00
358_P	361_V	0.720	1.00
208_A	211_Y	0.719	1.00
48_C	328_H	0.719	1.00
322_V	326_V	0.717	1.00
203_Y	257_F	0.717	1.00
50_P	301_M	0.715	1.00
278_W	335_M	0.715	1.00
161_T	164_H	0.713	1.00
140_L	143_N	0.712	1.00
202_E	206_K	0.710	1.00
39_G	313_R	0.710	1.00
351_N	354_A	0.708	0.99
174_L	186_M	0.708	0.99
420_F	424_R	0.707	0.99
84_M	88_F	0.707	0.99
413_N	416_D	0.706	0.99
29_T	32_I	0.705	0.99
324_T	355_V	0.705	0.99
383_C	390_K	0.704	0.99
13_T	298_G	0.704	0.99
98_I	170_A	0.702	0.99
157_D	160_F	0.698	0.99
245_L	249_P	0.698	0.99
321_Q	324_T	0.697	0.99
87_Y	344_P	0.695	0.99
433_D	437_K	0.695	0.99
301_M	381_V	0.695	0.99
350_E	363_V	0.695	0.99
101_W	104_D	0.693	0.99
240_V	243_D	0.691	0.99
89_K	95_T	0.691	0.99
393_L	432_L	0.690	0.99
295_I	302_Y	0.687	0.99
32_I	35_L	0.687	0.99
406_N	412_H	0.684	0.99
241_G	245_L	0.683	0.99
236_M	239_P	0.681	0.99
94_H	179_R	0.679	0.99
83_T	86_R	0.677	0.99
21_C	311_I	0.676	0.99
206_K	260_D	0.674	0.99
236_M	241_G	0.673	0.99
171_V	261_Q	0.672	0.99
85_G	89_K	0.671	0.99
258_V	262_I	0.671	0.99
114_C	117_E	0.671	0.99
60_F	85_G	0.670	0.99
23_S	33_D	0.669	0.99
367_R	371_E	0.667	0.99
137_E	141_W	0.664	0.99
164_H	202_E	0.664	0.99
116_P	123_W	0.662	0.99
48_C	64_Y	0.662	0.99
312_I	352_I	0.660	0.99
98_I	166_I	0.658	0.99
7_L	265_V	0.658	0.99
24_G	28_N	0.657	0.99
115_P	118_W	0.655	0.99
7_L	273_Q	0.654	0.99
352_I	356_K	0.653	0.99
10_M	187_V	0.650	0.99
258_V	281_Y	0.649	0.99
140_L	144_G	0.648	0.99
393_L	435_M	0.647	0.99
263_G	267_N	0.647	0.99
26_P	252_F	0.647	0.99
23_S	26_P	0.645	0.99
337_A	354_A	0.645	0.99
369_E	384_W	0.642	0.99
214_L	218_A	0.642	0.99
414_L	419_R	0.642	0.99
306_T	383_C	0.636	0.99
20_G	28_N	0.635	0.99
384_W	427_M	0.634	0.99
42_F	326_V	0.634	0.99
251_Y	255_N	0.634	0.99
126_G	129_Y	0.633	0.99
20_G	27_L	0.632	0.99
161_T	254_C	0.631	0.99
18_M	252_F	0.631	0.99
21_C	32_I	0.631	0.99
135_E	138_I	0.630	0.99
287_E	291_A	0.628	0.99
179_R	182_E	0.628	0.99
192_E	254_C	0.627	0.99
163_A	257_F	0.626	0.99
210_F	249_P	0.624	0.99
289_M	297_K	0.622	0.99
367_R	370_I	0.621	0.99
361_V	364_E	0.619	0.99
45_A	308_I	0.618	0.99
117_E	121_D	0.616	0.99
97_Y	101_W	0.616	0.99
42_F	312_I	0.614	0.99
14_Q	18_M	0.613	0.99
282_T	328_H	0.613	0.99
61_T	81_I	0.613	0.99
298_G	305_I	0.612	0.99
123_W	129_Y	0.609	0.98
42_F	322_V	0.608	0.98
203_Y	206_K	0.607	0.98
407_D	412_H	0.606	0.98
212_Y	249_P	0.606	0.98
398_S	413_N	0.605	0.98
193_P	251_Y	0.603	0.98
53_T	73_N	0.601	0.98
164_H	168_N	0.600	0.98
139_S	143_N	0.600	0.98
9_V	188_V	0.597	0.98
184_F	269_L	0.597	0.98
203_Y	253_A	0.597	0.98
324_T	363_V	0.594	0.98
202_E	257_F	0.594	0.98
60_F	120_A	0.594	0.98
85_G	97_Y	0.592	0.98
424_R	427_M	0.592	0.98
287_E	290_G	0.592	0.98
156_I	159_T	0.592	0.98
40_I	356_K	0.591	0.98
125_D	129_Y	0.591	0.98
190_Y	262_I	0.588	0.98
368_Y	371_E	0.586	0.98
214_L	217_K	0.585	0.98
367_R	434_Y	0.585	0.98
37_A	319_R	0.584	0.98
164_H	264_R	0.584	0.98
335_M	339_A	0.583	0.98
11_T	193_P	0.583	0.98
44_S	323_D	0.582	0.98
168_N	261_Q	0.582	0.98
291_A	304_D	0.580	0.98
132_E	198_T	0.579	0.98
262_I	281_Y	0.578	0.98
167_S	188_V	0.577	0.98
86_R	90_D	0.577	0.98
163_A	167_S	0.577	0.98
35_L	281_Y	0.576	0.98
86_R	89_K	0.576	0.98
53_T	102_H	0.576	0.98
40_I	319_R	0.576	0.98
303_D	404_R	0.574	0.98
334_T	352_I	0.574	0.98
199_C	254_C	0.574	0.98
10_M	328_H	0.573	0.98
237_P	246_Y	0.572	0.98
369_E	434_Y	0.571	0.98
308_I	328_H	0.571	0.98
280_I	331_L	0.570	0.98
244_G	247_H	0.567	0.98
59_L	331_L	0.565	0.98
84_M	335_M	0.565	0.98
338_L	357_E	0.564	0.98
167_S	170_A	0.564	0.98
97_Y	123_W	0.564	0.98
385_V	404_R	0.563	0.97
174_L	177_P	0.563	0.97
35_L	279_V	0.562	0.97
68_S	81_I	0.561	0.97
432_L	436_D	0.561	0.97
350_E	355_V	0.561	0.97
388_D	406_N	0.561	0.97
307_R	408_P	0.560	0.97
48_C	329_I	0.559	0.97
123_W	130_L	0.559	0.97
355_V	364_E	0.558	0.97
48_C	65_A	0.558	0.97
214_L	241_G	0.558	0.97
416_D	421_A	0.557	0.97
7_L	174_L	0.556	0.97
282_T	310_L	0.555	0.97
10_M	55_A	0.555	0.97
137_E	143_N	0.555	0.97
27_L	207_Y	0.554	0.97
166_I	191_D	0.554	0.97
237_P	240_V	0.554	0.97
139_S	142_R	0.553	0.97
287_E	293_K	0.551	0.97
419_R	422_D	0.550	0.97
366_N	430_A	0.550	0.97
180_A	273_Q	0.550	0.97
41_R	311_I	0.549	0.97
367_R	384_W	0.549	0.97
236_M	240_V	0.549	0.97
123_W	127_A	0.549	0.97
336_M	347_L	0.549	0.97
90_D	95_T	0.549	0.97
38_E	266_I	0.549	0.97
115_P	121_D	0.548	0.97
432_L	435_M	0.548	0.97
115_P	119_D	0.547	0.97
292_H	304_D	0.546	0.97
354_A	359_R	0.546	0.97
27_L	193_P	0.546	0.97
64_Y	348_P	0.545	0.97
350_E	365_F	0.541	0.97
6_F	185_L	0.541	0.97
325_P	385_V	0.541	0.97
34_S	274_R	0.541	0.97
285_H	308_I	0.538	0.97
7_L	188_V	0.538	0.97
116_P	144_G	0.538	0.97
27_L	255_N	0.538	0.97
124_F	165_R	0.536	0.97
250_L	254_C	0.536	0.97
294_L	408_P	0.535	0.97
296_S	300_A	0.534	0.97
274_R	315_P	0.533	0.97
16_T	285_H	0.532	0.96
416_D	419_R	0.531	0.96
389_F	405_R	0.530	0.96
85_G	120_A	0.529	0.96
324_T	387_D	0.529	0.96
120_A	126_G	0.529	0.96
370_I	373_D	0.529	0.96
136_K	140_L	0.528	0.96
11_T	32_I	0.528	0.96
94_H	121_D	0.528	0.96
156_I	160_F	0.527	0.96
138_I	141_W	0.524	0.96
174_L	273_Q	0.523	0.96
52_C	100_K	0.522	0.96
354_A	358_P	0.522	0.96
242_D	246_Y	0.522	0.96
51_V	54_P	0.522	0.96
197_F	287_E	0.521	0.96
46_Y	387_D	0.519	0.96
401_L	413_N	0.519	0.96
177_P	182_E	0.519	0.96
287_E	292_H	0.518	0.96
19_V	311_I	0.517	0.96
313_R	317_G	0.516	0.96
139_S	144_G	0.515	0.96
357_E	360_G	0.514	0.96
209_D	212_Y	0.512	0.96
424_R	431_L	0.512	0.96
22_Y	311_I	0.511	0.96
136_K	142_R	0.510	0.96
8_F	187_V	0.509	0.95
31_N	266_I	0.509	0.95
120_A	187_V	0.508	0.95
20_G	36_A	0.508	0.95
126_G	191_D	0.508	0.95
276_N	316_Q	0.507	0.95
82_S	85_G	0.507	0.95
246_Y	249_P	0.505	0.95
136_K	141_W	0.505	0.95
275_E	313_R	0.504	0.95
91_A	339_A	0.503	0.95
433_D	436_D	0.503	0.95
152_Q	155_H	0.502	0.95
19_V	33_D	0.501	0.95
79_K	118_W	0.500	0.95

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2vqrA	3	0.9034	100	0.245	Contact Map
4upiA	2	0.9618	100	0.25	Contact Map
4uplA	2	0.9799	100	0.254	Contact Map
4uphA	2	0.9014	100	0.256	Contact Map
4upkA	3	0.9095	100	0.266	Contact Map
1hdhA	1	0.841	100	0.278	Contact Map
3b5qA	1	0.8833	100	0.288	Contact Map
2qzuA	2	0.8531	100	0.292	Contact Map
1p49A	3	0.8431	100	0.301	Contact Map
1aukA	3	0.831	100	0.301	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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