MODF - ECOLI - GREMLIN Contacts

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MODF - Putative molybdenum transport ATP-binding protein ModF

UniProt:	P31060	Sequences: MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11677
Length:	490 (380)
Sequences:	531 (360)
Seq/√Len:	18.4

ECOLI - MODF GSIA XYLG ALSA YEJF MGLA UUP YHES YPHE
BACSU - YKPA YKOD YFMM YUFO YFMR YDIF EXPZ
HALSA - Q9HMC1
SULSO - Y2030 Y1893 Q97UG5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
265_N	278_N	7.575	1.00
386_D	391_D	4.277	1.00
303_L	458_V	3.987	1.00
120_A	129_L	3.921	1.00
287_E	471_H	3.891	1.00
138_T	343_S	3.415	1.00
263_L	266_G	3.334	1.00
339_G	420_P	3.254	0.99
303_L	424_I	3.094	0.99
267_V	278_N	3.087	0.99
299_K	460_H	3.060	0.99
191_V	194_R	2.928	0.99
290_Q	469_I	2.687	0.98
264_N	317_D	2.623	0.97
356_R	381_V	2.590	0.97
206_G	213_L	2.451	0.96
120_A	123_F	2.434	0.96
139_G	299_K	2.273	0.94
258_E	285_P	2.269	0.94
267_V	277_N	2.265	0.94
121_Q	126_T	2.249	0.94
390_I	410_A	2.234	0.93
190_L	392_K	2.063	0.90
356_R	395_A	2.053	0.90
385_L	390_I	2.039	0.90
161_E	193_N	2.031	0.90
139_G	460_H	2.024	0.89
355_V	402_L	2.005	0.89
420_P	423_L	1.983	0.88
284_N	287_E	1.967	0.88
167_D	301_T	1.966	0.88
143_K	170_S	1.964	0.88
230_Q	235_E	1.947	0.88
189_V	240_V	1.925	0.87
204_F	216_T	1.912	0.87
360_L	381_V	1.879	0.86
100_R	103_A	1.859	0.85
243_P	246_D	1.854	0.85
161_E	403_S	1.839	0.84
301_T	460_H	1.834	0.84
221_E	386_D	1.826	0.84
359_I	459_S	1.824	0.84
167_D	299_K	1.807	0.83
349_Y	440_I	1.789	0.83
97_D	100_R	1.789	0.83
138_T	345_L	1.787	0.82
121_Q	180_S	1.775	0.82
163_F	171_R	1.759	0.81
140_E	190_L	1.730	0.80
100_R	104_E	1.725	0.80
161_E	308_G	1.719	0.80
203_Q	409_L	1.711	0.80
167_D	460_H	1.686	0.79
215_E	218_A	1.681	0.78
131_R	134_K	1.681	0.78
388_L	416_L	1.680	0.78
261_I	456_L	1.662	0.78
178_L	220_E	1.651	0.77
304_S	310_H	1.628	0.76
230_Q	233_H	1.591	0.74
443_F	447_L	1.585	0.74
427_E	460_H	1.577	0.74
385_L	395_A	1.576	0.74
459_S	464_D	1.573	0.73
99_G	104_E	1.531	0.71
238_E	241_Q	1.498	0.70
165_G	281_W	1.494	0.69
187_T	194_R	1.490	0.69
232_A	235_E	1.483	0.69
258_E	376_R	1.481	0.69
291_I	412_I	1.478	0.69
295_N	460_H	1.471	0.68
364_F	374_S	1.471	0.68
277_N	480_G	1.464	0.68
291_I	475_F	1.462	0.68
299_K	427_E	1.450	0.67
403_S	406_Q	1.449	0.67
185_G	195_F	1.448	0.67
337_H	421_T	1.440	0.66
159_L	178_L	1.433	0.66
308_G	381_V	1.421	0.65
167_D	427_E	1.419	0.65
382_Q	395_A	1.414	0.65
228_V	231_L	1.412	0.65
137_S	299_K	1.406	0.65
315_S	423_L	1.405	0.65
260_R	422_L	1.402	0.64
186_I	190_L	1.386	0.63
138_T	301_T	1.385	0.63
137_S	460_H	1.376	0.63
295_N	299_K	1.374	0.63
375_D	379_K	1.365	0.62
346_H	407_Q	1.359	0.62
137_S	167_D	1.357	0.62
239_G	244_E	1.350	0.61
181_L	300_S	1.347	0.61
321_F	332_W	1.345	0.61
266_G	481_L	1.344	0.61
299_K	343_S	1.342	0.61
230_Q	234_S	1.322	0.60
150_L	186_I	1.318	0.59
224_Q	248_P	1.316	0.59
239_G	242_L	1.312	0.59
145_L	358_V	1.291	0.58
217_G	222_L	1.288	0.58
356_R	382_Q	1.279	0.57
259_P	284_N	1.270	0.57
139_G	427_E	1.261	0.56
429_L	457_F	1.259	0.56
221_E	249_S	1.251	0.55
165_G	342_S	1.239	0.55
167_D	426_D	1.237	0.54
103_A	452_E	1.236	0.54
283_V	303_L	1.234	0.54
412_I	440_I	1.228	0.54
232_A	236_Q	1.225	0.54
262_V	282_Q	1.225	0.54
278_N	381_V	1.216	0.53
385_L	410_A	1.214	0.53
143_K	174_L	1.209	0.53
212_T	221_E	1.200	0.52
408_R	441_R	1.195	0.52
430_Q	437_R	1.193	0.52
300_S	449_S	1.192	0.52
218_A	221_E	1.190	0.52
281_W	289_W	1.180	0.51
233_H	237_L	1.178	0.51
212_T	265_N	1.174	0.51
139_G	301_T	1.160	0.50
189_V	424_I	1.157	0.50
206_G	290_Q	1.155	0.49
276_L	279_L	1.150	0.49
343_S	348_D	1.146	0.49
165_G	345_L	1.142	0.49
142_R	165_G	1.132	0.48
139_G	295_N	1.131	0.48
97_D	101_T	1.123	0.47
404_W	408_R	1.120	0.47
389_G	392_K	1.120	0.47
99_G	103_A	1.120	0.47
316_N	457_F	1.120	0.47
164_D	171_R	1.118	0.47
332_W	335_K	1.117	0.47
293_G	298_G	1.112	0.47
293_G	296_G	1.112	0.47
140_E	156_L	1.103	0.46
346_H	349_Y	1.100	0.46
266_G	413_V	1.099	0.46
408_R	437_R	1.096	0.46
240_V	244_E	1.095	0.46
349_Y	412_I	1.092	0.45
231_L	237_L	1.090	0.45
343_S	460_H	1.087	0.45
230_Q	237_L	1.084	0.45
349_Y	384_W	1.077	0.45
125_I	206_G	1.075	0.44
149_A	196_D	1.072	0.44
297_A	340_Y	1.067	0.44
362_G	418_K	1.066	0.44
165_G	401_S	1.065	0.44
407_Q	420_P	1.063	0.44
213_L	465_A	1.060	0.44
142_R	437_R	1.057	0.43
239_G	251_R	1.057	0.43
342_S	346_H	1.056	0.43
212_T	252_H	1.054	0.43
128_L	131_R	1.053	0.43
187_T	193_N	1.052	0.43
140_E	432_L	1.046	0.43
249_S	253_A	1.044	0.43
368_G	371_Q	1.044	0.43
299_K	426_D	1.040	0.42
246_D	250_A	1.034	0.42
179_A	200_E	1.033	0.42
142_R	193_N	1.033	0.42
142_R	358_V	1.033	0.42
408_R	469_I	1.033	0.42
345_L	430_Q	1.029	0.42
231_L	239_G	1.025	0.41
147_C	163_F	1.023	0.41
150_L	154_P	1.023	0.41
234_S	237_L	1.022	0.41
175_A	410_A	1.021	0.41
123_F	280_S	1.021	0.41
161_E	404_W	1.020	0.41
142_R	408_R	1.018	0.41
297_A	300_S	1.018	0.41
227_L	231_L	1.017	0.41
277_N	341_V	1.014	0.41
140_E	157_L	1.012	0.41
406_Q	412_I	1.011	0.41
163_F	430_Q	1.008	0.40
479_G	482_Y	1.003	0.40
181_L	188_L	1.002	0.40
304_S	338_I	1.001	0.40
231_L	235_E	0.999	0.40
187_T	191_V	0.999	0.40
345_L	358_V	0.995	0.40
320_L	479_G	0.993	0.39
211_C	429_L	0.992	0.39
165_G	430_Q	0.989	0.39
127_A	392_K	0.988	0.39
358_V	399_F	0.988	0.39
371_Q	442_R	0.983	0.39
142_R	145_L	0.982	0.39
349_Y	437_R	0.981	0.39
304_S	415_A	0.981	0.39
309_D	399_F	0.978	0.39
233_H	236_Q	0.967	0.38
263_L	458_V	0.967	0.38
143_K	339_G	0.965	0.38
222_L	253_A	0.963	0.38
191_V	201_F	0.961	0.38
210_D	387_I	0.959	0.37
422_L	472_R	0.958	0.37
238_E	396_D	0.958	0.37
295_N	300_S	0.956	0.37
159_L	162_P	0.955	0.37
97_D	104_E	0.948	0.37
194_R	308_G	0.947	0.37
437_R	464_D	0.945	0.37
154_P	399_F	0.939	0.36
186_I	205_A	0.939	0.36
248_P	251_R	0.937	0.36
477_P	480_G	0.931	0.36
343_S	429_L	0.930	0.36
295_N	366_S	0.927	0.36
228_V	240_V	0.920	0.35
125_I	170_S	0.917	0.35
408_R	430_Q	0.917	0.35
291_I	470_T	0.917	0.35
478_D	481_L	0.917	0.35
356_R	396_D	0.916	0.35
297_A	479_G	0.914	0.35
189_V	277_N	0.912	0.35
141_T	190_L	0.912	0.35
143_K	408_R	0.911	0.35
121_Q	406_Q	0.908	0.35
349_Y	430_Q	0.904	0.34
221_E	264_N	0.903	0.34
191_V	412_I	0.894	0.34
299_K	432_L	0.894	0.34
265_N	272_D	0.893	0.34
220_E	382_Q	0.892	0.34
383_Q	386_D	0.892	0.34
166_L	211_C	0.890	0.34
340_Y	383_Q	0.889	0.33
408_R	411_L	0.886	0.33
316_N	429_L	0.885	0.33
241_Q	244_E	0.884	0.33
160_D	298_G	0.882	0.33
160_D	293_G	0.882	0.33
160_D	296_G	0.882	0.33
231_L	234_S	0.880	0.33
346_H	408_R	0.878	0.33
118_Q	122_Q	0.874	0.33
359_I	413_V	0.873	0.33
176_E	267_V	0.869	0.32
232_A	244_E	0.866	0.32
288_H	408_R	0.865	0.32
373_V	376_R	0.864	0.32
237_L	248_P	0.863	0.32
240_V	248_P	0.860	0.32
226_A	231_L	0.859	0.32
250_A	264_N	0.858	0.32
322_G	456_L	0.857	0.32
141_T	409_L	0.856	0.32
200_E	242_L	0.855	0.32
238_E	248_P	0.855	0.32
467_A	470_T	0.853	0.32
312_Q	468_C	0.850	0.31
300_S	453_T	0.849	0.31
249_S	391_D	0.840	0.31
426_D	460_H	0.838	0.31
395_A	417_V	0.837	0.31
171_R	430_Q	0.835	0.31
243_P	250_A	0.833	0.30
350_R	367_I	0.832	0.30
120_A	317_D	0.830	0.30
178_L	240_V	0.830	0.30
151_M	320_L	0.828	0.30
232_A	265_N	0.828	0.30
133_F	174_L	0.827	0.30
218_A	386_D	0.826	0.30
263_L	306_V	0.825	0.30
210_D	379_K	0.825	0.30
156_L	198_I	0.823	0.30
348_D	398_P	0.819	0.30
280_S	395_A	0.819	0.30
123_F	418_K	0.818	0.30
163_F	174_L	0.812	0.29
299_K	406_Q	0.809	0.29
165_G	437_R	0.806	0.29
343_S	461_H	0.805	0.29
100_R	185_G	0.802	0.29
232_A	242_L	0.801	0.29
144_T	450_E	0.800	0.29
162_P	193_N	0.800	0.29
359_I	363_Y	0.800	0.29
227_L	237_L	0.797	0.29
157_L	420_P	0.796	0.29
339_G	414_R	0.795	0.28
125_I	473_L	0.794	0.28
307_T	318_L	0.794	0.28
309_D	342_S	0.793	0.28
142_R	164_D	0.793	0.28
301_T	343_S	0.792	0.28
392_K	395_A	0.789	0.28
346_H	430_Q	0.786	0.28
146_L	423_L	0.785	0.28
200_E	236_Q	0.784	0.28
462_A	472_R	0.784	0.28
345_L	458_V	0.781	0.28
219_K	222_L	0.780	0.28
161_E	385_L	0.780	0.28
163_F	404_W	0.775	0.27
163_F	429_L	0.775	0.27
185_G	189_V	0.774	0.27
165_G	408_R	0.773	0.27
165_G	339_G	0.772	0.27
163_F	444_V	0.772	0.27
137_S	427_E	0.771	0.27
428_P	431_G	0.770	0.27
97_D	398_P	0.769	0.27
209_A	265_N	0.769	0.27
408_R	461_H	0.766	0.27
434_P	438_Q	0.766	0.27
246_D	252_H	0.762	0.27
406_Q	460_H	0.760	0.27
177_R	202_V	0.759	0.27
131_R	135_Y	0.758	0.27
275_I	389_G	0.757	0.27
399_F	429_L	0.757	0.27
287_E	390_I	0.756	0.27
182_H	188_L	0.751	0.26
240_V	243_P	0.750	0.26
335_K	407_Q	0.750	0.26
242_L	375_D	0.747	0.26
165_G	182_H	0.745	0.26
359_I	381_V	0.744	0.26
292_V	472_R	0.744	0.26
402_L	412_I	0.743	0.26
196_D	440_I	0.743	0.26
409_L	430_Q	0.741	0.26
187_T	343_S	0.741	0.26
264_N	449_S	0.741	0.26
191_V	458_V	0.739	0.26
203_Q	211_C	0.737	0.26
240_V	246_D	0.737	0.26
259_P	323_R	0.736	0.26
224_Q	246_D	0.736	0.26
374_S	377_Q	0.734	0.25
408_R	412_I	0.733	0.25
263_L	281_W	0.732	0.25
461_H	464_D	0.732	0.25
189_V	260_R	0.732	0.25
180_S	212_T	0.731	0.25
197_E	420_P	0.729	0.25
271_N	465_A	0.728	0.25
207_V	410_A	0.727	0.25
130_D	455_L	0.725	0.25
309_D	414_R	0.722	0.25
411_L	414_R	0.721	0.25
306_V	333_D	0.721	0.25
305_L	318_L	0.720	0.25
390_I	394_T	0.719	0.25
365_D	368_G	0.719	0.25
295_N	301_T	0.719	0.25
210_D	240_V	0.718	0.25
169_A	276_L	0.717	0.25
210_D	266_G	0.715	0.25
148_Q	459_S	0.715	0.25
126_T	232_A	0.714	0.25
458_V	475_F	0.713	0.24
307_T	459_S	0.711	0.24
344_S	440_I	0.710	0.24
273_R	320_L	0.707	0.24
306_V	397_A	0.706	0.24
227_L	232_A	0.705	0.24
122_Q	176_E	0.703	0.24
117_M	300_S	0.701	0.24
100_R	399_F	0.700	0.24
97_D	141_T	0.699	0.24
220_E	390_I	0.699	0.24
217_G	454_Q	0.699	0.24
255_P	467_A	0.696	0.24
358_V	459_S	0.694	0.24
193_N	409_L	0.694	0.24
125_I	465_A	0.690	0.23
138_T	411_L	0.686	0.23
258_E	390_I	0.684	0.23
210_D	390_I	0.683	0.23
264_N	294_P	0.683	0.23
188_L	210_D	0.682	0.23
438_Q	473_L	0.682	0.23
304_S	458_V	0.679	0.23
170_S	173_Q	0.678	0.23
145_L	348_D	0.678	0.23
320_L	383_Q	0.677	0.23
136_L	294_P	0.677	0.23
283_V	291_I	0.675	0.23
396_D	422_L	0.675	0.23
220_E	250_A	0.674	0.23
99_G	399_F	0.673	0.23
356_R	391_D	0.673	0.23
194_R	270_Y	0.670	0.23
143_K	336_K	0.669	0.23
221_E	444_V	0.667	0.22
197_E	354_T	0.666	0.22
149_A	268_V	0.664	0.22
112_D	115_R	0.663	0.22
343_S	358_V	0.663	0.22
321_F	326_G	0.662	0.22
113_A	130_D	0.661	0.22
437_R	441_R	0.660	0.22
349_Y	399_F	0.660	0.22
301_T	432_L	0.659	0.22
392_K	456_L	0.659	0.22
360_L	378_Q	0.655	0.22
179_A	248_P	0.655	0.22
356_R	386_D	0.654	0.22
177_R	188_L	0.651	0.22
456_L	475_F	0.650	0.22
406_Q	461_H	0.650	0.22
250_A	253_A	0.649	0.22
179_A	183_Q	0.649	0.22
141_T	464_D	0.648	0.22
220_E	277_N	0.648	0.22
190_L	374_S	0.647	0.22
410_A	421_T	0.647	0.22
253_A	376_R	0.646	0.22
309_D	358_V	0.645	0.22
305_L	415_A	0.645	0.22
303_L	455_L	0.645	0.22
343_S	346_H	0.644	0.21
143_K	361_S	0.640	0.21
229_A	234_S	0.640	0.21
191_V	338_I	0.639	0.21
192_L	440_I	0.638	0.21
351_V	417_V	0.638	0.21
235_E	243_P	0.637	0.21
139_G	426_D	0.637	0.21
289_W	429_L	0.636	0.21
249_S	257_N	0.636	0.21
228_V	235_E	0.635	0.21
271_N	315_S	0.635	0.21
205_A	219_K	0.634	0.21
412_I	437_R	0.632	0.21
345_L	411_L	0.632	0.21
118_Q	205_A	0.629	0.21
123_F	306_V	0.627	0.21
215_E	458_V	0.624	0.21
142_R	461_H	0.624	0.21
138_T	299_K	0.624	0.21
165_G	361_S	0.623	0.21
119_L	123_F	0.620	0.20
241_Q	252_H	0.619	0.20
301_T	406_Q	0.619	0.20
242_L	249_S	0.618	0.20
172_Q	263_L	0.616	0.20
301_T	427_E	0.616	0.20
100_R	398_P	0.615	0.20
261_I	320_L	0.614	0.20
142_R	464_D	0.612	0.20
145_L	309_D	0.612	0.20
192_L	461_H	0.609	0.20
275_I	308_G	0.608	0.20
326_G	335_K	0.607	0.20
432_L	460_H	0.607	0.20
159_L	350_R	0.607	0.20
176_E	220_E	0.606	0.20
289_W	418_K	0.603	0.20
465_A	468_C	0.602	0.20
352_S	362_G	0.599	0.20
168_V	475_F	0.597	0.20
349_Y	432_L	0.597	0.20
261_I	386_D	0.595	0.19
142_R	281_W	0.594	0.19
291_I	422_L	0.593	0.19
264_N	379_K	0.591	0.19
390_I	460_H	0.591	0.19
157_L	413_V	0.591	0.19
165_G	268_V	0.589	0.19
417_V	440_I	0.588	0.19
339_G	407_Q	0.588	0.19
104_E	452_E	0.588	0.19
98_T	105_I	0.585	0.19
137_S	301_T	0.583	0.19
97_D	102_T	0.581	0.19
280_S	390_I	0.577	0.19
188_L	379_K	0.577	0.19
362_G	424_I	0.575	0.19
165_G	432_L	0.574	0.19
103_A	116_C	0.572	0.19
310_H	346_H	0.571	0.19
344_S	412_I	0.571	0.19
408_R	464_D	0.571	0.19
169_A	200_E	0.570	0.19
272_D	396_D	0.570	0.19
212_T	450_E	0.569	0.18
139_G	167_D	0.567	0.18
143_K	414_R	0.566	0.18
154_P	314_Y	0.566	0.18
358_V	464_D	0.565	0.18
197_E	308_G	0.565	0.18
301_T	426_D	0.564	0.18
212_T	379_K	0.562	0.18
455_L	475_F	0.559	0.18
264_N	373_V	0.556	0.18
245_P	253_A	0.555	0.18
358_V	414_R	0.553	0.18
126_T	189_V	0.552	0.18
226_A	230_Q	0.551	0.18
170_S	417_V	0.551	0.18
225_Q	253_A	0.551	0.18
290_Q	475_F	0.550	0.18
320_L	471_H	0.550	0.18
137_S	295_N	0.548	0.18
240_V	253_A	0.546	0.18
297_A	313_G	0.544	0.18
169_A	212_T	0.543	0.18
225_Q	228_V	0.543	0.18
139_G	343_S	0.543	0.18
447_L	481_L	0.540	0.17
341_V	412_I	0.540	0.17
145_L	148_Q	0.539	0.17
302_L	406_Q	0.539	0.17
170_S	234_S	0.537	0.17
319_T	337_H	0.534	0.17
157_L	178_L	0.532	0.17
191_V	436_N	0.530	0.17
130_D	278_N	0.529	0.17
237_L	240_V	0.526	0.17
165_G	362_G	0.526	0.17
142_R	399_F	0.525	0.17
262_V	322_G	0.525	0.17
220_E	267_V	0.525	0.17
261_I	392_K	0.524	0.17
150_L	188_L	0.523	0.17
228_V	232_A	0.523	0.17
248_P	264_N	0.522	0.17
125_I	143_K	0.522	0.17
342_S	414_R	0.521	0.17
109_E	169_A	0.520	0.17
142_R	309_D	0.520	0.17
111_K	241_Q	0.520	0.17
121_Q	285_P	0.518	0.17
316_N	343_S	0.517	0.17
342_S	410_A	0.517	0.17
305_L	362_G	0.517	0.17
213_L	395_A	0.517	0.17
444_V	463_E	0.517	0.17
227_L	234_S	0.515	0.17
171_R	361_S	0.513	0.16
181_L	371_Q	0.513	0.16
342_S	348_D	0.513	0.16
241_Q	249_S	0.512	0.16
238_E	249_S	0.511	0.16
266_G	420_P	0.511	0.16
292_V	343_S	0.510	0.16
202_V	417_V	0.510	0.16
428_P	433_D	0.510	0.16
229_A	235_E	0.509	0.16
114_P	390_I	0.509	0.16
184_S	251_R	0.508	0.16
115_R	181_L	0.506	0.16
238_E	245_P	0.502	0.16
432_L	464_D	0.501	0.16
168_V	383_Q	0.501	0.16
159_L	164_D	0.500	0.16

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2iw3A	2	0.9102	100	0.434	Contact Map
4finA	2	0.9082	100	0.443	Contact Map
4q9hA	1	0.9531	100	0.446	Contact Map
1yqtA	1	0.9163	100	0.447	Contact Map
3ozxA	1	0.9061	100	0.45	Contact Map
3bk7A	1	0.9286	100	0.45	Contact Map
4f4cA	1	0.9388	100	0.453	Contact Map
3j16B	1	0.9388	100	0.462	Contact Map
3ux8A	2	0.8184	100	0.485	Contact Map
2vf7A	2	0.9469	100	0.531	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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