GREMLIN Database
CYDD - ATP-binding/permease protein CydD
UniProt: P29018 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11405
Length: 588 (560)
Sequences: 53002 (37813)
Seq/√Len: 1597.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
465_S475_V4.4651.00
351_E372_T4.4291.00
374_P377_Q4.2751.00
377_Q552_V4.2221.00
354_E368_P4.2121.00
552_V564_Q4.0801.00
437_A441_D4.0031.00
460_D465_S3.8861.00
440_R452_E3.8711.00
353_E405_S3.8691.00
567_Y577_F3.7691.00
349_T372_T3.5571.00
353_E407_R3.5361.00
465_S469_P3.4931.00
405_S412_E3.3051.00
367_G560_R3.1081.00
440_R476_D3.0861.00
574_G578_A3.0041.00
440_R444_L3.0021.00
452_E456_Q2.9581.00
364_T367_G2.9441.00
451_S454_E2.9231.00
352_A355_L2.9141.00
356_F368_P2.7691.00
459_L475_V2.7221.00
424_H505_S2.6851.00
393_L540_V2.6841.00
393_L508_L2.6481.00
351_E407_R2.5941.00
457_A461_N2.5601.00
349_T374_P2.4661.00
358_T364_T2.4431.00
554_W564_Q2.4151.00
566_R569_E2.4021.00
456_Q465_S2.3901.00
563_E573_A2.3901.00
503_P535_Q2.3441.00
417_S420_S2.3431.00
373_L379_A2.3401.00
473_Q477_T2.3341.00
356_F403_Q2.3211.00
443_V459_L2.3191.00
356_F364_T2.3161.00
398_G401_S2.3021.00
156_V160_P2.3011.00
440_R455_L2.2641.00
563_E574_G2.2391.00
447_R454_E2.2241.00
563_E575_G2.2191.00
426_S504_C2.2161.00
378_R550_W2.1381.00
557_Q576_P2.1201.00
349_T375_A2.1171.00
456_Q460_D2.0911.00
371_F554_W2.0841.00
529_N549_D2.0441.00
50_Q284_G2.0141.00
464_V467_F2.0061.00
443_V455_L1.9871.00
454_E503_P1.9761.00
521_E543_Q1.9721.00
401_S414_R1.9611.00
352_A371_F1.9571.00
358_T402_Y1.9551.00
373_L538_L1.9341.00
565_G569_E1.9261.00
456_Q469_P1.9261.00
325_K329_E1.9211.00
354_E370_N1.9061.00
20_S97_A1.8941.00
18_V21_Q1.8921.00
63_L67_T1.8811.00
105_R332_L1.8701.00
197_A234_D1.8641.00
348_V409_N1.8411.00
16_Q101_Q1.8361.00
522_Q526_E1.8011.00
458_A462_A1.7841.00
379_A552_V1.7681.00
162_N271_S1.7441.00
50_Q282_D1.7411.00
379_A554_W1.7391.00
444_L455_L1.7371.00
392_L556_M1.7321.00
562_I576_P1.7321.00
457_A460_D1.7271.00
463_W523_R1.7261.00
452_E476_D1.7191.00
557_Q562_I1.7101.00
554_W561_I1.6921.00
444_L452_E1.6821.00
220_R223_A1.6821.00
380_V550_W1.6801.00
377_Q551_D1.6691.00
378_R539_M1.6661.00
461_N530_A1.6521.00
516_L524_V1.6151.00
480_G485_R1.6101.00
350_I538_L1.6091.00
571_S581_L1.5951.00
450_A501_L1.5901.00
347_P409_N1.5881.00
412_E415_D1.5771.00
67_T71_L1.5771.00
443_V501_L1.5671.00
381_L554_W1.5661.00
129_Q323_S1.5541.00
349_T409_N1.5461.00
454_E457_A1.5411.00
479_V486_L1.5391.00
108_Q332_L1.5281.00
466_E469_P1.5201.00
459_L468_L1.5141.00
192_R322_D1.4841.00
456_Q475_V1.4811.00
64_L68_L1.4741.00
266_V270_F1.4701.00
381_L392_L1.4551.00
548_A568_A1.4551.00
563_E578_A1.4481.00
159_F166_A1.4481.00
473_Q478_P1.4481.00
200_R234_D1.4431.00
374_P552_V1.4401.00
384_R557_Q1.4381.00
576_P579_T1.4371.00
204_H231_A1.4321.00
453_Q456_Q1.4281.00
366_A369_L1.4191.00
397_S427_W1.4101.00
541_T546_D1.4061.00
46_A292_L1.4041.00
105_R109_A1.3991.00
352_A396_L1.3921.00
357_I391_S1.3771.00
270_F278_F1.3751.00
193_R238_R1.3661.00
459_L465_S1.3631.00
568_A572_V1.3611.00
395_A406_L1.3571.00
159_F163_W1.3501.00
467_F490_Q1.3471.00
526_E530_A1.3391.00
530_A533_L1.3391.00
436_A478_P1.3381.00
357_I395_A1.3341.00
452_E455_L1.3241.00
368_P560_R1.3091.00
346_D409_N1.3091.00
454_E501_L1.3081.00
19_I97_A1.3051.00
197_A238_R1.3021.00
197_A200_R1.3011.00
186_G189_D1.2921.00
444_L450_A1.2801.00
348_V375_A1.2761.00
426_S499_A1.2751.00
357_I400_L1.2701.00
356_F367_G1.2681.00
453_Q457_A1.2631.00
380_V547_L1.2551.00
42_A296_L1.2501.00
224_E445_L1.2491.00
60_E64_L1.2491.00
411_I415_D1.2471.00
471_L477_T1.2471.00
384_R576_P1.2411.00
532_S537_T1.2371.00
569_E573_A1.2311.00
30_L79_V1.2301.00
353_E370_N1.2211.00
396_L538_L1.2201.00
178_L182_L1.2161.00
385_S520_S1.2101.00
208_R224_E1.2091.00
461_N500_L1.2081.00
480_G483_A1.2051.00
226_E230_S1.2031.00
100_R104_D1.2001.00
349_T410_G1.1991.00
336_Q417_S1.1961.00
105_R328_M1.1911.00
375_A505_S1.1901.00
470_L490_Q1.1861.00
467_F471_L1.1861.00
39_I153_L1.1841.00
271_S280_H1.1751.00
379_A538_L1.1711.00
233_E237_Q1.1711.00
447_R450_A1.1671.00
371_F392_L1.1631.00
439_L494_V1.1581.00
216_R221_G1.1551.00
459_L464_V1.1551.00
369_L392_L1.1541.00
222_E226_E1.1541.00
469_P474_G1.1511.00
464_V468_L1.1491.00
418_P422_R1.1451.00
553_I567_Y1.1441.00
347_P375_A1.1401.00
165_A293_A1.1401.00
117_K121_S1.1331.00
456_Q459_L1.1311.00
211_G433_Q1.1301.00
236_R240_M1.1291.00
364_T402_Y1.1231.00
492_Q514_A1.1231.00
486_L494_V1.1231.00
115_Q400_L1.1191.00
451_S501_L1.1191.00
104_D108_Q1.1151.00
463_W520_S1.1101.00
46_A50_Q1.1101.00
200_R231_A1.1061.00
105_R108_Q1.1051.00
282_D285_V1.1021.00
352_A406_L1.1001.00
411_I416_L1.0991.00
458_A500_L1.0961.00
373_L536_T1.0941.00
43_W47_R1.0921.00
378_R537_T1.0911.00
172_T260_S1.0891.00
466_E470_L1.0881.00
224_E227_S1.0861.00
567_Y571_S1.0861.00
190_A241_E1.0851.00
102_V327_F1.0801.00
158_I293_A1.0801.00
354_E403_Q1.0721.00
555_V576_P1.0681.00
118_P121_S1.0681.00
23_W89_H1.0681.00
321_A325_K1.0671.00
97_A101_Q1.0671.00
420_S423_K1.0671.00
33_V79_V1.0661.00
267_Y271_S1.0641.00
89_H93_H1.0621.00
350_I396_L1.0591.00
539_M550_W1.0571.00
462_A497_A1.0551.00
121_S199_A1.0541.00
352_A392_L1.0471.00
359_S365_L1.0451.00
408_I421_W1.0421.00
14_K18_V1.0361.00
463_W526_E1.0351.00
337_R415_D1.0321.00
428_V499_A1.0321.00
432_P495_A1.0301.00
230_S234_D1.0281.00
541_T547_L1.0271.00
463_W527_A1.0251.00
115_Q394_N1.0251.00
47_R51_H1.0181.00
204_H227_S1.0151.00
44_F65_P1.0111.00
364_T403_Q1.0071.00
241_E244_R1.0031.00
463_W530_A0.9991.00
505_S535_Q0.9941.00
499_A507_L0.9941.00
182_L186_G0.9931.00
27_S87_G0.9931.00
152_L156_V0.9901.00
455_L475_V0.9891.00
223_A227_S0.9881.00
167_L171_G0.9871.00
25_N29_L0.9861.00
441_D444_L0.9851.00
30_L82_L0.9851.00
164_A280_H0.9801.00
523_R526_E0.9781.00
22_R26_I0.9771.00
228_I232_S0.9751.00
21_Q25_N0.9731.00
507_L535_Q0.9731.00
511_E542_H0.9711.00
458_A501_L0.9671.00
220_R224_E0.9651.00
215_L224_E0.9651.00
193_R197_A0.9641.00
457_A503_P0.9641.00
132_D320_A0.9631.00
355_L395_A0.9631.00
46_A285_V0.9601.00
192_R196_L0.9591.00
405_S414_R0.9541.00
519_H523_R0.9521.00
113_W117_K0.9501.00
398_G418_P0.9491.00
351_E410_G0.9491.00
163_W167_L0.9491.00
227_S231_A0.9481.00
368_P403_Q0.9431.00
387_S556_M0.9401.00
377_Q564_Q0.9391.00
96_F100_R0.9381.00
380_V541_T0.9371.00
318_V322_D0.9351.00
473_Q476_D0.9351.00
461_N531_A0.9341.00
468_L475_V0.9341.00
234_D238_R0.9341.00
64_L67_T0.9331.00
385_S493_R0.9301.00
223_A226_E0.9301.00
30_L86_V0.9281.00
337_R340_A0.9281.00
569_E572_V0.9271.00
268_F290_G0.9241.00
353_E372_T0.9171.00
110_G333_A0.9171.00
416_L421_W0.9161.00
420_S424_H0.9161.00
406_L413_L0.9141.00
440_R456_Q0.9131.00
556_M561_I0.9131.00
390_S394_N0.9091.00
455_L501_L0.9081.00
164_A271_S0.9061.00
351_E370_N0.9051.00
460_D469_P0.9031.00
378_R529_N0.9031.00
229_R233_E0.9011.00
450_A454_E0.9001.00
233_E236_R0.8961.00
358_T365_L0.8961.00
428_V496_V0.8931.00
225_I229_R0.8921.00
20_S93_H0.8901.00
419_E423_K0.8901.00
334_H401_S0.8891.00
179_F252_I0.8881.00
160_P163_W0.8881.00
479_V485_R0.8851.00
378_R532_S0.8841.00
397_S425_L0.8821.00
543_Q546_D0.8801.00
240_M244_R0.8781.00
231_A234_D0.8771.00
397_S508_L0.8761.00
440_R475_V0.8751.00
71_L75_L0.8731.00
488_V493_R0.8711.00
125_L326_T0.8711.00
561_I564_Q0.8701.00
102_V126_V0.8681.00
101_Q105_R0.8681.00
112_A333_A0.8681.00
186_G245_L0.8681.00
408_I506_L0.8671.00
227_S230_S0.8651.00
464_V470_L0.8631.00
155_V166_A0.8621.00
190_A238_R0.8571.00
193_R241_E0.8561.00
435_P442_N0.8531.00
461_N465_S0.8521.00
380_V553_I0.8511.00
194_N239_T0.8501.00
189_D193_R0.8481.00
358_T362_G0.8471.00
513_A524_V0.8461.00
112_A116_G0.8431.00
345_T409_N0.8431.00
27_S90_A0.8421.00
186_G190_A0.8421.00
272_Y281_Y0.8411.00
181_A185_M0.8411.00
375_A409_N0.8411.00
226_E229_R0.8411.00
469_P475_V0.8401.00
129_Q320_A0.8391.00
109_A330_T0.8361.00
43_W157_A0.8341.00
575_G578_A0.8341.00
213_E394_N0.8311.00
47_R65_P0.8291.00
177_P181_A0.8291.00
576_P580_L0.8271.00
343_A416_L0.8261.00
158_I166_A0.8261.00
238_R241_E0.8261.00
573_A578_A0.8251.00
479_V483_A0.8241.00
61_A64_L0.8231.00
341_E411_I0.8211.00
168_I267_Y0.8201.00
37_L75_L0.8201.00
557_Q560_R0.8201.00
507_L532_S0.8181.00
413_L421_W0.8181.00
480_G484_A0.8181.00
496_V509_L0.8171.00
157_A161_S0.8161.00
434_L494_V0.8151.00
407_R410_G0.8131.00
37_L79_V0.8091.00
15_Q18_V0.8051.00
434_L491_A0.8041.00
350_I408_I0.8041.00
464_V494_V0.8031.00
331_P335_P0.8031.00
222_E225_I0.8021.00
467_F470_L0.8001.00
438_T441_D0.7991.00
504_C535_Q0.7971.00
574_G579_T0.7971.00
369_L561_I0.7951.00
356_F402_Y0.7951.00
443_V475_V0.7891.00
269_G273_L0.7881.00
423_K502_N0.7881.00
193_R196_L0.7861.00
345_T505_S0.7851.00
201_L235_F0.7841.00
211_G214_T0.7831.00
214_T218_F0.7831.00
157_A160_P0.7821.00
212_M216_R0.7811.00
255_F259_L0.7801.00
360_P363_K0.7801.00
37_L72_T0.7791.00
23_W93_H0.7781.00
425_L506_L0.7781.00
462_A493_R0.7771.00
443_V494_V0.7771.00
358_T361_E0.7751.00
47_R50_Q0.7751.00
44_F72_T0.7741.00
14_K17_S0.7721.00
492_Q515_S0.7701.00
521_E525_M0.7701.00
43_W46_A0.7691.00
161_S285_V0.7691.00
153_L156_V0.7691.00
343_A346_D0.7681.00
571_S578_A0.7681.00
23_W86_V0.7661.00
493_R520_S0.7661.00
147_A306_D0.7651.00
44_F68_L0.7641.00
121_S125_L0.7631.00
341_E415_D0.7621.00
339_E343_A0.7621.00
51_H61_A0.7611.00
416_L420_S0.7601.00
237_Q241_E0.7601.00
78_W82_L0.7571.00
31_G146_L0.7561.00
444_L449_D0.7561.00
171_G174_P0.7551.00
132_D316_Q0.7551.00
15_Q101_Q0.7541.00
159_F170_L0.7521.00
234_D237_Q0.7501.00
431_N491_A0.7501.00
471_L486_L0.7481.00
164_A167_L0.7481.00
65_P68_L0.7471.00
348_V536_T0.7461.00
267_Y270_F0.7461.00
50_Q53_I0.7461.00
67_T70_V0.7451.00
382_V555_V0.7441.00
36_I40_A0.7441.00
105_R331_P0.7431.00
525_M546_D0.7391.00
110_G334_H0.7381.00
507_L537_T0.7381.00
102_V324_L0.7361.00
358_T363_K0.7361.00
447_R503_P0.7351.00
573_A576_P0.7351.00
197_A231_A0.7341.00
343_A420_S0.7331.00
272_Y290_G0.7331.00
136_Y317_A0.7331.00
20_S23_W0.7331.00
447_R502_N0.7321.00
81_W85_R0.7311.00
101_Q104_D0.7301.00
324_L328_M0.7301.00
273_L278_F0.7291.00
35_G149_S0.7271.00
106_L114_I0.7271.00
68_L71_L0.7261.00
367_G558_D0.7251.00
444_L447_R0.7231.00
350_I506_L0.7231.00
407_R412_E0.7231.00
66_F70_V0.7221.00
51_H54_M0.7211.00
148_V152_L0.7191.00
162_N166_A0.7191.00
577_F580_L0.7191.00
463_W466_E0.7181.00
421_W425_L0.7161.00
322_D326_T0.7161.00
156_V159_F0.7141.00
235_F239_T0.7141.00
161_S292_L0.7121.00
122_W327_F0.7101.00
178_L181_A0.7091.00
154_I300_F0.7081.00
154_I299_E0.7071.00
444_L448_P0.7061.00
378_R549_D0.7041.00
49_L291_F0.7041.00
461_N527_A0.7021.00
26_I86_V0.7011.00
376_G536_T0.6981.00
525_M541_T0.6981.00
567_Y581_L0.6961.00
439_L468_L0.6961.00
552_V566_R0.6951.00
336_Q418_P0.6951.00
118_P203_G0.6941.00
342_L420_S0.6941.00
385_S511_E0.6941.00
185_M189_D0.6931.00
379_A564_Q0.6931.00
63_L66_F0.6931.00
488_V515_S0.6911.00
376_G534_R0.6911.00
241_E245_L0.6901.00
95_R134_H0.6901.00
75_L79_V0.6891.00
359_S391_S0.6871.00
101_Q328_M0.6871.00
472_P477_T0.6831.00
269_G272_Y0.6831.00
342_L417_S0.6831.00
104_D225_I0.6821.00
190_A193_R0.6821.00
363_K367_G0.6811.00
394_N400_L0.6791.00
29_L33_V0.6781.00
34_S80_V0.6771.00
521_E546_D0.6771.00
458_A497_A0.6771.00
552_V569_E0.6761.00
271_S278_F0.6761.00
162_N165_A0.6751.00
336_Q339_E0.6741.00
136_Y314_K0.6741.00
165_A271_S0.6741.00
166_A293_A0.6741.00
436_A480_G0.6731.00
125_L129_Q0.6721.00
527_A530_A0.6711.00
395_A400_L0.6701.00
436_A485_R0.6691.00
513_A521_E0.6681.00
437_A478_P0.6671.00
61_A65_P0.6661.00
496_V524_V0.6651.00
496_V500_L0.6641.00
563_E576_P0.6641.00
43_W161_S0.6631.00
33_V75_L0.6621.00
524_V527_A0.6611.00
457_A531_A0.6601.00
93_H96_F0.6581.00
452_E475_V0.6571.00
95_R99_R0.6571.00
393_L538_L0.6541.00
568_A571_S0.6541.00
347_P536_T0.6521.00
408_I413_L0.6481.00
366_A556_M0.6471.00
31_G83_R0.6471.00
346_D424_H0.6431.00
302_Q306_D0.6421.00
109_A332_L0.6421.00
50_Q54_M0.6411.00
334_H398_G0.6411.00
98_I130_I0.6381.00
144_M148_V0.6371.00
563_E570_L0.6371.00
243_L247_F0.6361.00
373_L377_Q0.6341.00
111_P115_Q0.6341.00
547_L550_W0.6341.00
355_L404_G0.6341.00
259_L263_L0.6341.00
177_P180_M0.6331.00
154_I296_L0.6331.00
464_V475_V0.6321.00
268_F272_Y0.6311.00
454_E458_A0.6291.00
563_E571_S0.6291.00
393_L427_W0.6291.00
508_L538_L0.6291.00
195_F198_L0.6281.00
517_D520_S0.6281.00
381_L538_L0.6281.00
361_E402_Y0.6271.00
22_R25_N0.6261.00
182_L185_M0.6251.00
262_A266_V0.6251.00
60_E63_L0.6241.00
506_L536_T0.6241.00
340_A343_A0.6231.00
199_A323_S0.6231.00
247_F251_G0.6221.00
317_A320_A0.6201.00
459_L462_A0.6191.00
487_S490_Q0.6171.00
102_V328_M0.6151.00
237_Q240_M0.6151.00
431_N482_Q0.6131.00
516_L520_S0.6131.00
463_W524_V0.6121.00
363_K558_D0.6111.00
135_D313_A0.6111.00
438_T476_D0.6111.00
320_A323_S0.6111.00
129_Q195_F0.6101.00
124_T202_S0.6101.00
455_L459_L0.6101.00
40_A72_T0.6091.00
281_Y285_V0.6081.00
567_Y570_L0.6081.00
164_A267_Y0.6061.00
160_P164_A0.6051.00
340_A420_S0.6041.00
116_G360_P0.6041.00
456_Q468_L0.6041.00
352_A369_L0.6041.00
341_E344_S0.6031.00
59_R63_L0.6031.00
518_A521_E0.6031.00
493_R516_L0.6031.00
16_Q19_I0.6001.00
564_Q569_E0.6001.00
369_L556_M0.5991.00
39_I42_A0.5991.00
133_M321_A0.5981.00
102_V130_I0.5971.00
371_F561_I0.5961.00
105_R330_T0.5961.00
357_I365_L0.5961.00
562_I574_G0.5931.00
113_W122_W0.5911.00
135_D139_R0.5911.00
462_A500_L0.5911.00
373_L378_R0.5901.00
521_E545_E0.5901.00
131_D134_H0.5901.00
174_P178_L0.5901.00
25_N28_R0.5891.00
362_G365_L0.5891.00
335_P417_S0.5881.00
358_T403_Q0.5871.00
444_L459_L0.5871.00
53_I56_N0.5861.00
426_S502_N0.5851.00
548_A567_Y0.5841.00
428_V509_L0.5841.00
88_Y92_Q0.5841.00
563_E579_T0.5811.00
162_N281_Y0.5811.00
197_A235_F0.5811.00
196_L200_R0.5801.00
193_R234_D0.5801.00
460_D466_E0.5801.00
204_H224_E0.5791.00
124_T128_E0.5791.00
183_V249_S0.5791.00
474_G477_T0.5791.00
92_Q95_R0.5791.00
355_L406_L0.5781.00
268_F271_S0.5781.00
418_P421_W0.5771.00
88_Y139_R0.5771.00
429_G432_P0.5751.00
462_A496_V0.5741.00
191_N242_V0.5741.00
146_L150_V0.5741.00
526_E529_N0.5731.00
110_G113_W0.5731.00
103_L107_Q0.5731.00
526_E549_D0.5721.00
452_E459_L0.5721.00
204_H208_R0.5711.00
151_P155_V0.5711.00
409_N505_S0.5711.00
258_S262_A0.5711.00
374_P379_A0.5711.00
381_L540_V0.5701.00
195_F319_G0.5701.00
74_V78_W0.5701.00
91_G138_A0.5701.00
190_A242_V0.5691.00
143_Q306_D0.5691.00
263_L267_Y0.5691.00
124_T198_L0.5671.00
18_V22_R0.5671.00
553_I566_R0.5661.00
169_L297_A0.5651.00
430_Q488_V0.5651.00
355_L370_N0.5651.00
394_N427_W0.5641.00
34_S79_V0.5631.00
555_V563_E0.5631.00
525_M539_M0.5631.00
442_N494_V0.5631.00
44_F47_R0.5631.00
558_D562_I0.5611.00
459_L497_A0.5611.00
19_I101_Q0.5601.00
214_T217_I0.5601.00
85_R89_H0.5591.00
444_L501_L0.5591.00
119_A123_A0.5571.00
270_F273_L0.5571.00
408_I416_L0.5551.00
369_L554_W0.5551.00
391_S400_L0.5541.00
577_F581_L0.5541.00
447_R501_L0.5531.00
367_G370_N0.5531.00
111_P399_F0.5531.00
292_L296_L0.5521.00
364_T368_P0.5511.00
77_A81_W0.5501.00
356_F366_A0.5501.00
35_G38_I0.5491.00
147_A151_P0.5491.00
336_Q340_A0.5491.00
513_A516_L0.5481.00
509_L512_P0.5481.00
121_S323_S0.5481.00
385_S541_T0.5481.00
230_S233_E0.5471.00
434_L479_V0.5471.00
382_V547_L0.5471.00
20_S90_A0.5461.00
20_S94_I0.5451.00
254_E305_R0.5441.00
120_G203_G0.5431.00
68_L72_T0.5431.00
346_D375_A0.5421.00
293_A297_A0.5421.00
16_Q20_S0.5421.00
96_F232_S0.5411.00
372_T564_Q0.5411.00
417_S421_W0.5401.00
381_L556_M0.5401.00
98_I133_M0.5401.00
43_W292_L0.5391.00
124_T199_A0.5381.00
35_G39_I0.5371.00
215_L221_G0.5371.00
114_I117_K0.5371.00
85_R88_Y0.5371.00
38_I76_R0.5361.00
260_S263_L0.5361.00
206_L210_R0.5361.00
361_E364_T0.5361.00
538_L554_W0.5341.00
107_Q110_G0.5331.00
31_G35_G0.5331.00
439_L479_V0.5321.00
338_G342_L0.5321.00
557_Q579_T0.5321.00
390_S393_L0.5311.00
175_L178_L0.5311.00
465_S468_L0.5301.00
232_S236_R0.5291.00
489_G517_D0.5291.00
82_L86_V0.5291.00
70_V74_V0.5291.00
198_L202_S0.5291.00
130_I324_L0.5281.00
257_T261_I0.5281.00
33_V37_L0.5281.00
179_F256_F0.5271.00
525_M549_D0.5271.00
340_A417_S0.5261.00
527_A531_A0.5261.00
52_M61_A0.5261.00
520_S523_R0.5251.00
232_S235_F0.5241.00
500_L527_A0.5241.00
385_S516_L0.5241.00
200_R203_G0.5231.00
194_N198_L0.5221.00
123_A127_L0.5221.00
500_L531_A0.5221.00
348_V505_S0.5211.00
79_V82_L0.5211.00
460_D475_V0.5201.00
571_S574_G0.5191.00
341_E345_T0.5191.00
284_G292_L0.5181.00
339_E417_S0.5181.00
339_E415_D0.5181.00
346_D349_T0.5181.00
374_P536_T0.5181.00
126_V130_I0.5181.00
194_N242_V0.5171.00
57_I61_A0.5161.00
84_E88_Y0.5161.00
442_N498_R0.5151.00
155_V159_F0.5141.00
391_S395_A0.5131.00
248_L251_G0.5131.00
27_S86_V0.5131.00
265_A268_F0.5131.00
44_F69_L0.5121.00
346_D408_I0.5111.00
447_R451_S0.5111.00
532_S535_Q0.5111.00
512_P539_M0.5111.00
271_S279_G0.5101.00
125_L323_S0.5101.00
17_S24_L0.5091.00
23_W90_A0.5091.00
155_V158_I0.5081.00
443_V446_A0.5071.00
439_L464_V0.5071.00
411_I420_S0.5061.00
334_H418_P0.5061.00
372_T375_A0.5061.00
468_L471_L0.5061.00
518_A545_E0.5061.00
345_T348_V0.5051.00
208_R215_L0.5051.00
142_P145_A0.5051.00
523_R527_A0.5041.00
95_R130_I0.5041.00
531_A535_Q0.5041.00
147_A150_V0.5021.00
139_R143_Q0.5021.00
34_S38_I0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ry2A 2 0.9609 100 0.088 Contact Map
4a82A 2 0.9694 100 0.123 Contact Map
4q4hB 1 0.9796 100 0.153 Contact Map
4f4cA 1 0.9626 100 0.157 Contact Map
3b5xA 2 0.9677 100 0.161 Contact Map
3b60A 2 0.9626 100 0.166 Contact Map
4q4hA 1 0.9677 100 0.17 Contact Map
3zdqA 2 0.9524 100 0.173 Contact Map
3wmgA 1 0.9745 100 0.175 Contact Map
4mrsA 2 0.9864 100 0.176 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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