GREMLIN Database
ACSA - Acetyl-coenzyme A synthetase
UniProt: P27550 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11448
Length: 652 (506)
Sequences: 62313 (43983)
Seq/√Len: 1955.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
258_P275_L3.9991.00
539_H582_W3.2001.00
464_L502_A3.0141.00
480_D483_R2.9511.00
118_C154_R2.9161.00
277_T475_R2.8641.00
445_Q467_T2.8431.00
177_D263_Y2.8131.00
136_A180_S2.7771.00
114_H154_R2.7651.00
129_I157_A2.7591.00
133_D181_R2.7421.00
96_I326_T2.6881.00
503_R511_W2.6781.00
300_I326_T2.5111.00
179_N479_G2.4641.00
93_T107_H2.4541.00
83_D114_H2.4301.00
89_N92_R2.3801.00
123_T127_L2.3771.00
134_V160_S2.3681.00
463_S497_F2.3551.00
449_V465_V2.2801.00
544_E604_K2.2521.00
461_E501_G2.2431.00
85_H89_N2.2101.00
447_A455_P2.2081.00
536_L561_A2.1861.00
148_A184_I2.1721.00
537_V545_A2.1651.00
521_N526_R2.1641.00
116_D147_V2.1641.00
177_D480_D2.1571.00
450_D454_N2.1571.00
173_G270_K2.1171.00
114_H118_C2.1011.00
538_A586_E2.1001.00
344_Q348_K2.0941.00
505_D511_W2.0881.00
483_R486_Q2.0431.00
254_N257_D2.0381.00
465_V497_F2.0301.00
611_M614_I2.0281.00
97_W143_P2.0071.00
518_D612_R1.9851.00
131_K257_D1.9761.00
560_Y597_H1.9701.00
172_A176_I1.9541.00
299_D381_R1.9481.00
181_R215_E1.9381.00
96_I107_H1.9321.00
481_H485_E1.9301.00
120_F147_V1.9091.00
91_D111_K1.8981.00
152_C157_A1.8781.00
132_G257_D1.8771.00
505_D509_Y1.8721.00
436_S511_W1.8621.00
76_N84_R1.8541.00
392_P396_E1.8531.00
125_L155_I1.8321.00
96_I349_H1.8201.00
350_Q379_S1.8121.00
299_D352_N1.8111.00
117_V154_R1.7891.00
461_E513_T1.7631.00
84_R88_E1.7611.00
130_K133_D1.7571.00
111_K115_R1.7531.00
503_R513_T1.7451.00
533_E547_V1.7221.00
543_A566_N1.7101.00
458_G504_R1.7001.00
614_I617_K1.6971.00
504_R510_Y1.6881.00
447_A465_V1.6801.00
140_P186_S1.6721.00
328_L351_V1.6621.00
277_T280_G1.6541.00
127_L216_H1.6331.00
537_V544_E1.6291.00
153_A259_L1.6251.00
109_S112_E1.6141.00
522_V527_L1.6131.00
541_K578_E1.6071.00
83_D154_R1.6041.00
341_R344_Q1.6031.00
258_P475_R1.6021.00
482_E486_Q1.5961.00
90_G111_K1.5951.00
85_H88_E1.5931.00
563_V598_W1.5631.00
408_P426_L1.5471.00
86_L114_H1.5471.00
290_K323_C1.5471.00
146_A317_L1.5451.00
564_T602_L1.5421.00
535_A586_E1.5421.00
422_M466_I1.5411.00
123_T240_L1.5361.00
93_T96_I1.5241.00
547_V561_A1.5201.00
134_V158_V1.5191.00
531_E591_A1.5121.00
548_V562_Y1.5031.00
136_A162_I1.5031.00
93_T326_T1.4941.00
423_I446_P1.4901.00
108_I147_V1.4891.00
448_L502_A1.4781.00
275_L478_F1.4761.00
261_I478_F1.4671.00
580_R596_L1.4661.00
291_Y442_F1.4651.00
565_L598_W1.4611.00
256_E279_G1.4611.00
562_Y615_L1.4601.00
457_E460_T1.4531.00
551_P557_Q1.4491.00
541_K569_E1.4421.00
108_I143_P1.4421.00
582_W586_E1.4371.00
347_D375_T1.4351.00
320_P325_A1.4261.00
280_G419_G1.4251.00
126_E244_A1.4221.00
577_A581_N1.4181.00
92_R298_G1.4141.00
118_C122_N1.4121.00
474_A488_Y1.4001.00
275_L476_T1.3931.00
175_I180_S1.3931.00
396_E400_K1.3921.00
134_V261_I1.3911.00
359_T388_E1.3881.00
132_G475_R1.3871.00
338_T341_R1.3851.00
356_T361_I1.3841.00
502_A512_I1.3711.00
302_W351_V1.3701.00
446_P466_I1.3691.00
563_V596_L1.3691.00
345_V349_H1.3641.00
135_V152_C1.3621.00
172_A210_N1.3591.00
489_F493_K1.3591.00
97_W106_K1.3581.00
135_V157_A1.3541.00
160_S178_S1.3491.00
501_G516_V1.3461.00
300_I328_L1.3441.00
487_T496_Y1.3381.00
461_E503_R1.3341.00
136_A175_I1.3321.00
415_Q496_Y1.3291.00
178_S263_Y1.3241.00
450_D456_L1.3241.00
296_H299_D1.3231.00
433_K507_D1.3141.00
77_L80_N1.3091.00
114_H248_H1.3071.00
158_V258_P1.3061.00
255_A279_G1.3021.00
263_Y273_G1.2971.00
562_Y599_T1.2961.00
94_A113_L1.2921.00
605_T611_M1.2831.00
187_D221_K1.2821.00
236_W239_D1.2821.00
177_D270_K1.2821.00
330_F345_V1.2731.00
581_N585_K1.2731.00
299_D353_I1.2711.00
129_I133_D1.2711.00
116_D119_R1.2691.00
520_L529_T1.2611.00
275_L475_R1.2571.00
549_G557_Q1.2531.00
439_R509_Y1.2521.00
467_T495_M1.2451.00
300_I351_V1.2421.00
425_P509_Y1.2381.00
279_G471_P1.2381.00
311_T355_Y1.2321.00
173_G177_D1.2301.00
129_I135_V1.2241.00
550_I560_Y1.2241.00
354_L380_L1.2221.00
580_R584_R1.2211.00
584_R592_T1.2191.00
106_K143_P1.2171.00
137_I148_A1.2131.00
361_I383_L1.2101.00
177_D479_G1.2081.00
385_S390_I1.2081.00
253_M257_D1.2071.00
489_F492_F1.2041.00
168_P172_A1.2041.00
182_L216_H1.2011.00
150_L321_L1.1971.00
525_H590_L1.1961.00
451_N516_V1.1951.00
584_R589_P1.1951.00
76_N80_N1.1941.00
489_F497_F1.1911.00
134_V478_F1.1851.00
120_F151_A1.1801.00
98_E331_E1.1801.00
560_Y595_V1.1761.00
256_E277_T1.1701.00
145_A307_V1.1691.00
120_F184_I1.1681.00
115_R119_R1.1641.00
483_R487_T1.1631.00
139_M220_L1.1581.00
168_P204_D1.1541.00
544_E564_T1.1521.00
552_H558_A1.1491.00
123_T244_A1.1471.00
366_A397_W1.1451.00
176_I270_K1.1441.00
558_A594_D1.1431.00
129_I182_L1.1421.00
264_T274_V1.1401.00
123_T126_E1.1381.00
353_I382_I1.1331.00
561_A596_L1.1291.00
107_H349_H1.1291.00
116_D144_E1.1261.00
112_E115_R1.1231.00
582_W585_K1.1221.00
83_D118_C1.1151.00
440_P446_P1.1151.00
535_A538_A1.1131.00
530_A534_S1.1111.00
138_Y171_V1.1101.00
447_A495_M1.1081.00
433_K509_Y1.1061.00
391_N394_A1.1061.00
115_R246_D1.1051.00
340_A367_E1.1021.00
444_V472_G1.1011.00
362_R394_A1.1001.00
108_I116_D1.0961.00
346_V379_S1.0951.00
562_Y616_R1.0951.00
98_E106_K1.0951.00
558_A595_V1.0951.00
425_P436_S1.0901.00
456_L460_T1.0831.00
151_A155_I1.0821.00
578_E581_N1.0821.00
96_I328_L1.0811.00
398_Y402_I1.0801.00
113_L150_L1.0791.00
94_A110_Y1.0751.00
261_I273_G1.0681.00
599_T602_L1.0671.00
162_I171_V1.0641.00
113_L147_V1.0511.00
276_H280_G1.0491.00
562_Y619_A1.0471.00
463_S516_V1.0441.00
599_T618_I1.0401.00
464_L512_I1.0391.00
572_S578_E1.0351.00
546_A602_L1.0331.00
300_I352_N1.0321.00
465_V489_F1.0311.00
301_Y320_P1.0271.00
121_A154_R1.0261.00
133_D157_A1.0211.00
519_V528_G1.0171.00
186_S189_G1.0161.00
305_A311_T1.0151.00
274_V474_A1.0141.00
437_A512_I1.0111.00
328_L345_V1.0101.00
550_I595_V1.0091.00
539_H579_V1.0051.00
95_I146_A0.9981.00
397_W401_K0.9941.00
108_I113_L0.9931.00
423_I510_Y0.9931.00
328_L349_H0.9861.00
134_V179_N0.9841.00
614_I618_I0.9831.00
284_Y420_G0.9811.00
280_G473_Q0.9781.00
169_E586_E0.9781.00
613_R617_K0.9761.00
533_E612_R0.9761.00
299_D325_A0.9741.00
583_V592_T0.9731.00
125_L249_Q0.9711.00
265_S607_S0.9651.00
166_F174_R0.9631.00
543_A564_T0.9621.00
467_T493_K0.9621.00
466_I498_S0.9611.00
173_G263_Y0.9601.00
169_E172_A0.9581.00
446_P510_Y0.9561.00
465_V495_M0.9481.00
283_V443_G0.9431.00
92_R326_T0.9421.00
93_T109_S0.9411.00
170_A591_A0.9411.00
539_H578_E0.9401.00
365_M397_W0.9391.00
127_L182_L0.9371.00
522_V549_G0.9361.00
393_E397_W0.9361.00
82_L86_L0.9351.00
581_N584_R0.9351.00
602_L610_I0.9351.00
403_G407_C0.9291.00
436_S509_Y0.9281.00
448_L456_L0.9251.00
302_W330_F0.9241.00
538_A582_W0.9231.00
117_V151_A0.9191.00
136_A183_V0.9161.00
106_K116_D0.9161.00
79_A253_M0.9131.00
262_L416_T0.9131.00
451_N463_S0.9051.00
173_G176_I0.9001.00
518_D530_A0.8981.00
95_I143_P0.8971.00
169_E173_G0.8951.00
362_R391_N0.8931.00
120_F148_A0.8921.00
397_W400_K0.8891.00
501_G514_G0.8881.00
122_N245_S0.8881.00
139_M142_V0.8871.00
535_A583_V0.8861.00
113_L117_V0.8841.00
283_V471_P0.8811.00
125_L130_K0.8801.00
112_E116_D0.8801.00
122_N125_L0.8791.00
163_F308_G0.8771.00
143_P147_V0.8771.00
446_P464_L0.8771.00
588_G591_A0.8751.00
124_L184_I0.8751.00
276_H474_A0.8731.00
450_D460_T0.8721.00
84_R87_Q0.8721.00
187_D222_R0.8721.00
122_N249_Q0.8691.00
578_E582_W0.8661.00
310_V415_Q0.8651.00
124_L152_C0.8651.00
83_D87_Q0.8641.00
355_Y421_F0.8611.00
453_G465_V0.8611.00
140_P188_E0.8591.00
173_G480_D0.8571.00
390_I395_W0.8561.00
320_P327_T0.8561.00
114_H117_V0.8541.00
285_A322_A0.8521.00
99_G106_K0.8511.00
459_A506_E0.8481.00
81_C287_L0.8451.00
520_L559_I0.8441.00
384_G412_T0.8401.00
168_P201_N0.8371.00
149_M159_H0.8371.00
129_I155_I0.8351.00
347_D376_D0.8331.00
382_I410_V0.8281.00
80_N84_R0.8251.00
560_Y619_A0.8231.00
551_P554_I0.8201.00
433_K505_D0.8191.00
482_E485_E0.8131.00
518_D533_E0.8131.00
448_L510_Y0.8101.00
361_I398_Y0.8081.00
253_M278_T0.8071.00
79_A153_A0.8061.00
146_A329_M0.8061.00
579_V596_L0.8051.00
152_C159_H0.8031.00
468_D473_Q0.8021.00
160_S180_S0.8021.00
136_A160_S0.8011.00
187_D219_V0.7991.00
144_E147_V0.7971.00
137_I159_H0.7971.00
523_S555_K0.7961.00
96_I300_I0.7951.00
276_H419_G0.7931.00
82_L114_H0.7921.00
447_A467_T0.7921.00
92_R297_P0.7911.00
259_L281_Y0.7861.00
340_A344_Q0.7821.00
119_R245_S0.7811.00
119_R246_D0.7801.00
93_T97_W0.7791.00
79_A278_T0.7761.00
361_I385_S0.7721.00
565_L571_P0.7721.00
80_N83_D0.7711.00
418_T422_M0.7711.00
126_E243_Q0.7711.00
127_L235_L0.7701.00
149_M313_H0.7691.00
337_P360_A0.7671.00
573_P577_A0.7671.00
300_I350_Q0.7671.00
147_V151_A0.7661.00
295_Y353_I0.7661.00
363_A554_I0.7661.00
617_K620_A0.7631.00
418_T496_Y0.7611.00
418_T473_Q0.7601.00
147_V237_W0.7571.00
185_T219_V0.7561.00
489_F495_M0.7561.00
352_N381_R0.7551.00
201_N204_D0.7541.00
410_V426_L0.7541.00
565_L569_E0.7531.00
530_A533_E0.7511.00
176_I213_S0.7511.00
122_N247_Q0.7501.00
106_K144_E0.7491.00
541_K566_N0.7491.00
315_Y355_Y0.7481.00
412_T421_F0.7451.00
125_L251_E0.7451.00
310_V420_G0.7451.00
393_E396_E0.7451.00
82_L150_L0.7421.00
81_C85_H0.7411.00
362_R397_W0.7401.00
136_A178_S0.7391.00
121_A155_I0.7361.00
304_T360_A0.7351.00
332_G336_W0.7351.00
85_H324_G0.7341.00
86_L90_G0.7331.00
357_A360_A0.7321.00
382_I408_P0.7321.00
418_T466_I0.7321.00
130_K181_R0.7311.00
375_T378_S0.7301.00
122_N246_D0.7291.00
346_V351_V0.7271.00
119_R123_T0.7261.00
446_P502_A0.7261.00
91_D109_S0.7221.00
258_P277_T0.7221.00
169_E270_K0.7221.00
468_D472_G0.7221.00
284_Y315_Y0.7211.00
344_Q347_D0.7211.00
77_L278_T0.7191.00
580_R592_T0.7191.00
344_Q375_T0.7191.00
362_R366_A0.7171.00
546_A610_I0.7151.00
260_F276_H0.7151.00
449_V455_P0.7141.00
139_M145_A0.7121.00
290_K319_G0.7111.00
120_F124_L0.7111.00
259_L278_T0.7081.00
107_H326_T0.7081.00
113_L146_A0.7081.00
79_A83_D0.7071.00
577_A580_R0.7061.00
135_V182_L0.7061.00
461_E516_V0.7051.00
311_T386_V0.7041.00
488_Y497_F0.7011.00
563_V579_V0.7011.00
185_T217_V0.7011.00
564_T601_S0.7001.00
138_Y183_V0.6991.00
144_E186_S0.6981.00
131_K251_E0.6981.00
75_L279_G0.6971.00
550_I558_A0.6961.00
369_D397_W0.6961.00
362_R393_E0.6951.00
302_W345_V0.6941.00
138_Y189_G0.6941.00
89_N111_K0.6921.00
134_V479_G0.6921.00
81_C282_L0.6911.00
347_D378_S0.6901.00
296_H381_R0.6881.00
497_F516_V0.6881.00
89_N297_P0.6861.00
174_R273_G0.6861.00
298_G352_N0.6861.00
464_L510_Y0.6861.00
152_C155_I0.6851.00
170_A531_E0.6851.00
346_V354_L0.6841.00
122_N244_A0.6831.00
522_V559_I0.6831.00
148_A152_C0.6831.00
502_A510_Y0.6811.00
270_K480_D0.6811.00
458_G506_E0.6811.00
583_V587_I0.6801.00
287_L291_Y0.6801.00
536_L545_A0.6781.00
355_Y412_T0.6781.00
368_G372_I0.6781.00
131_K253_M0.6761.00
302_W346_V0.6761.00
480_D484_F0.6761.00
185_T189_G0.6751.00
239_D242_E0.6721.00
316_L355_Y0.6711.00
87_Q114_H0.6681.00
541_K565_L0.6671.00
467_T494_N0.6651.00
355_Y386_V0.6641.00
304_T357_A0.6611.00
284_Y421_F0.6601.00
123_T241_V0.6601.00
182_L218_V0.6591.00
380_L383_L0.6591.00
81_C322_A0.6581.00
150_L318_Y0.6581.00
546_A615_L0.6581.00
125_L250_A0.6571.00
330_F342_M0.6571.00
122_N248_H0.6571.00
445_Q495_M0.6571.00
142_V186_S0.6531.00
284_Y419_G0.6511.00
415_Q418_T0.6501.00
373_E401_K0.6501.00
390_I409_V0.6501.00
562_Y618_I0.6481.00
116_D143_P0.6471.00
128_G157_A0.6461.00
441_F444_V0.6451.00
580_R583_V0.6451.00
326_T349_H0.6441.00
383_L398_Y0.6441.00
303_C316_L0.6431.00
492_F497_F0.6421.00
216_H235_L0.6421.00
207_K210_N0.6421.00
535_A582_W0.6421.00
89_N324_G0.6401.00
97_W331_E0.6391.00
502_A513_T0.6391.00
399_W408_P0.6391.00
548_V616_R0.6391.00
411_D435_G0.6391.00
542_I563_V0.6381.00
413_W422_M0.6371.00
484_F488_Y0.6371.00
120_F123_T0.6371.00
480_D486_Q0.6371.00
125_L248_H0.6361.00
589_P592_T0.6351.00
529_T547_V0.6341.00
149_M153_A0.6341.00
179_N213_S0.6331.00
256_E475_R0.6321.00
309_W525_H0.6321.00
93_T300_I0.6321.00
573_P598_W0.6311.00
139_M186_S0.6301.00
394_A397_W0.6301.00
204_D207_K0.6291.00
161_V262_L0.6291.00
121_A151_A0.6281.00
130_K157_A0.6281.00
149_M317_L0.6271.00
139_M148_A0.6271.00
448_L504_R0.6261.00
295_Y325_A0.6241.00
183_V202_V0.6241.00
288_T292_V0.6231.00
116_D241_V0.6221.00
120_F237_W0.6201.00
341_R345_V0.6171.00
548_V619_A0.6161.00
301_Y353_I0.6151.00
473_Q496_Y0.6141.00
522_V557_Q0.6131.00
345_V348_K0.6101.00
118_C248_H0.6091.00
573_P596_L0.6091.00
543_A567_H0.6081.00
354_L383_L0.6081.00
158_V261_I0.6061.00
315_Y421_F0.6051.00
522_V594_D0.6041.00
543_A565_L0.6041.00
389_P512_I0.6041.00
423_I437_A0.6011.00
79_A154_R0.6011.00
303_C327_T0.6011.00
402_I407_C0.6011.00
597_H618_I0.6011.00
285_A319_G0.5981.00
285_A318_Y0.5951.00
179_N478_F0.5931.00
166_F308_G0.5921.00
190_V219_V0.5921.00
562_Y597_H0.5911.00
129_I181_R0.5901.00
269_G528_G0.5881.00
534_S538_A0.5881.00
177_D478_F0.5881.00
108_I112_E0.5881.00
292_V442_F0.5871.00
124_L182_L0.5861.00
536_L583_V0.5861.00
595_V598_W0.5861.00
95_I327_T0.5861.00
202_V205_A0.5861.00
532_I559_I0.5861.00
517_D557_Q0.5851.00
149_M318_Y0.5841.00
80_N252_E0.5831.00
476_T481_H0.5821.00
533_E561_A0.5821.00
363_A366_A0.5821.00
412_T424_T0.5761.00
303_C329_M0.5741.00
280_G475_R0.5741.00
139_M185_T0.5741.00
95_I108_I0.5731.00
295_Y299_D0.5731.00
166_F171_V0.5711.00
474_A487_T0.5711.00
551_P620_A0.5711.00
140_P332_G0.5701.00
347_D379_S0.5701.00
98_E348_K0.5691.00
302_W342_M0.5691.00
385_S409_V0.5681.00
390_I411_D0.5681.00
110_Y321_L0.5681.00
261_I275_L0.5671.00
453_G489_F0.5661.00
287_L290_K0.5641.00
160_S263_Y0.5641.00
78_A153_A0.5631.00
398_Y409_V0.5631.00
304_T356_T0.5621.00
343_A368_G0.5611.00
305_A355_Y0.5611.00
597_H622_D0.5601.00
185_T190_V0.5601.00
158_V478_F0.5591.00
331_E341_R0.5581.00
542_I545_A0.5571.00
191_R201_N0.5561.00
303_C312_G0.5561.00
617_K621_G0.5551.00
165_G332_G0.5551.00
249_Q253_M0.5551.00
544_E602_L0.5531.00
139_M184_I0.5531.00
315_Y412_T0.5531.00
448_L462_G0.5531.00
449_V495_M0.5501.00
396_E399_W0.5501.00
95_I113_L0.5501.00
386_V421_F0.5491.00
422_M444_V0.5491.00
369_D374_G0.5491.00
118_C125_L0.5481.00
459_A503_R0.5481.00
415_Q498_S0.5481.00
489_F494_N0.5481.00
546_A612_R0.5471.00
535_A587_I0.5471.00
241_V244_A0.5471.00
117_V120_F0.5471.00
455_P465_V0.5471.00
342_M360_A0.5451.00
202_V206_L0.5451.00
466_I473_Q0.5441.00
117_V121_A0.5411.00
284_Y289_F0.5411.00
448_L464_L0.5401.00
292_V426_L0.5401.00
445_Q493_K0.5391.00
203_D206_L0.5391.00
260_F281_Y0.5371.00
306_D309_W0.5371.00
311_T420_G0.5361.00
134_V180_S0.5351.00
301_Y325_A0.5341.00
201_N205_A0.5341.00
352_N379_S0.5341.00
539_H542_I0.5331.00
178_S261_I0.5321.00
142_V220_L0.5321.00
449_V453_G0.5311.00
337_P342_M0.5301.00
110_Y325_A0.5291.00
124_L157_A0.5281.00
342_M346_V0.5281.00
219_V223_T0.5271.00
289_F315_Y0.5271.00
127_L240_L0.5261.00
111_K114_H0.5261.00
119_R244_A0.5251.00
140_P189_G0.5251.00
573_P580_R0.5241.00
552_H556_G0.5241.00
426_L439_R0.5221.00
437_A502_A0.5211.00
212_T215_E0.5211.00
123_T218_V0.5201.00
83_D250_A0.5201.00
162_I175_I0.5201.00
425_P428_G0.5191.00
488_Y496_Y0.5191.00
119_R122_N0.5171.00
300_I303_C0.5161.00
557_Q616_R0.5161.00
77_L253_M0.5161.00
484_F487_T0.5161.00
552_H555_K0.5151.00
184_I218_V0.5151.00
522_V555_K0.5141.00
96_I99_G0.5141.00
137_I152_C0.5141.00
365_M394_A0.5131.00
87_Q248_H0.5131.00
314_S420_G0.5121.00
177_D273_G0.5111.00
455_P504_R0.5111.00
520_L549_G0.5101.00
343_A377_R0.5091.00
160_S174_R0.5081.00
274_V416_T0.5071.00
284_Y422_M0.5071.00
311_T412_T0.5071.00
166_F590_L0.5061.00
386_V412_T0.5061.00
167_S170_A0.5051.00
260_F313_H0.5041.00
383_L407_C0.5041.00
146_A321_L0.5031.00
603_P615_L0.5031.00
551_P555_K0.5011.00
311_T384_G0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2vsqA 1 0.9156 100 0.134 Contact Map
1pg4A 1 0.9785 100 0.177 Contact Map
1ry2A 1 0.9294 100 0.201 Contact Map
4wd1A 1 0.9601 100 0.212 Contact Map
3tsyA 2 0.6933 100 0.22 Contact Map
4d4iA 1 0.7209 100 0.221 Contact Map
1amuA 1 0.7669 100 0.223 Contact Map
4dg8A 1 0.7469 100 0.228 Contact Map
4iz6A 2 0.8558 100 0.23 Contact Map
3etcA 2 0.8113 100 0.237 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0145 seconds.