GREMLIN Database
APPC - Cytochrome bd-II ubiquinol oxidase subunit 1
UniProt: P26459 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11380
Length: 514 (500)
Sequences: 677 (325)
Seq/√Len: 14.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
201_A430_L11.7191.00
170_S173_E8.6551.00
452_A462_A5.8861.00
273_A282_N5.7821.00
396_C400_L5.7681.00
133_V137_S5.6721.00
34_A131_W5.3561.00
261_Q308_K4.8421.00
276_E283_A4.7321.00
319_Q369_A4.2001.00
235_L401_L4.0961.00
276_E279_Q4.0331.00
194_T437_I3.4880.99
18_Y486_L3.4550.99
320_R347_L3.4220.99
243_Y298_H3.2850.99
207_L213_R2.9490.97
469_G473_F2.8990.97
334_G337_E2.7790.96
399_L429_S2.7610.96
311_M376_M2.7440.96
58_L198_F2.6930.95
17_L442_F2.6870.95
44_G123_K2.6280.95
31_F34_A2.5820.94
407_A422_V2.5750.94
296_A304_V2.5680.94
162_D344_F2.4740.93
297_T302_K2.4610.93
424_K428_W2.4060.92
270_H273_A2.3960.92
363_D366_H2.3610.91
442_F446_F2.2700.89
46_T50_D2.2670.89
205_W211_R2.2650.89
406_I410_Q2.2560.89
266_P290_A2.1640.87
368_T371_Q2.1620.87
416_I435_I2.1150.85
315_Y373_Q2.1080.85
204_A207_L2.0750.84
270_H282_N2.0610.84
382_Q385_P2.0360.83
31_F131_W2.0340.83
191_G234_T2.0210.82
361_A364_M1.9930.82
195_G430_L1.9900.81
205_W209_R1.9850.81
376_M379_A1.9820.81
483_T487_I1.9640.81
359_R378_G1.9570.80
4_V463_H1.9400.80
452_A459_T1.9090.79
251_V307_L1.8490.76
315_Y319_Q1.8480.76
108_S222_I1.8260.75
403_V422_V1.8160.75
210_G420_R1.7870.74
360_Y378_G1.7850.74
160_D167_E1.7790.73
239_D298_H1.7790.73
483_T486_L1.7670.73
429_S432_L1.7360.71
327_L347_L1.7320.71
212_E502_S1.7030.70
202_I497_A1.7020.70
128_L132_L1.6970.70
389_S439_A1.6940.70
193_V234_T1.6930.69
18_Y483_T1.6690.68
60_G115_F1.6690.68
242_A256_M1.6690.68
330_E367_V1.6550.68
195_G201_A1.6530.68
476_I480_G1.6480.67
230_A234_T1.6440.67
270_H387_F1.6410.67
326_L365_N1.6380.67
212_E504_M1.6310.66
292_L296_A1.6280.66
231_I401_L1.6200.66
277_Q384_A1.5770.64
131_W195_G1.5720.64
345_R348_E1.5660.63
213_R217_L1.5560.63
490_V494_Q1.5500.62
454_Q462_A1.5100.60
337_E340_V1.5080.60
494_Q497_A1.5030.60
204_A426_A1.5000.60
294_I300_L1.4930.59
204_A220_F1.4750.58
311_M380_I1.4630.58
94_A171_F1.4380.56
232_I236_Q1.4380.56
312_A315_Y1.4300.56
94_A168_M1.4200.55
452_A457_L1.4200.55
228_T232_I1.4190.55
201_A494_Q1.4170.55
251_V380_I1.4130.55
470_Q473_F1.4120.55
158_H348_E1.4010.54
410_Q419_H1.3960.54
50_D212_E1.3910.54
50_D504_M1.3880.54
272_V284_F1.3840.53
32_L196_A1.3840.53
327_L379_A1.3810.53
269_F292_L1.3740.53
314_T379_A1.3660.52
410_Q415_K1.3590.52
71_L201_A1.3540.52
34_A394_V1.3510.52
42_V408_L1.3480.51
30_I134_A1.3470.51
137_S258_G1.3380.51
310_L314_T1.3380.51
268_P292_L1.3370.51
420_R424_K1.3350.51
134_A138_N1.3320.51
314_T324_A1.3260.50
292_L304_V1.3130.50
111_V170_S1.3120.49
38_T131_W1.3040.49
161_I331_I1.2960.49
256_M269_F1.2810.48
142_L175_V1.2770.48
36_M166_M1.2730.47
170_S496_Y1.2710.47
191_G437_I1.2660.47
339_H343_A1.2650.47
269_F394_V1.2630.47
240_S298_H1.2610.47
176_F244_E1.2510.46
14_L479_V1.2340.45
228_T273_A1.2250.45
110_F292_L1.2180.44
311_M377_R1.2170.44
286_L388_W1.2160.44
382_Q446_F1.2140.44
399_L425_M1.2070.44
138_N195_G1.2070.44
466_L471_L1.2060.44
100_A485_F1.1950.43
279_Q283_A1.1930.43
496_Y499_L1.1910.43
366_H371_Q1.1820.42
294_I299_S1.1820.42
121_L129_V1.1790.42
158_H169_T1.1740.42
475_L479_V1.1680.42
361_A365_N1.1680.42
108_S251_V1.1660.41
9_R12_F1.1580.41
197_M201_A1.1560.41
395_G399_L1.1540.41
394_V443_M1.1540.41
173_E209_R1.1460.40
102_M459_T1.1430.40
282_N414_G1.1410.40
327_L340_V1.1390.40
33_L137_S1.1390.40
229_L232_I1.1390.40
197_M429_S1.1380.40
82_S474_S1.1370.40
47_I214_N1.1360.40
478_I485_F1.1350.40
76_Q195_G1.1350.40
248_V454_Q1.1290.40
361_A366_H1.1280.39
374_A378_G1.1230.39
430_L494_Q1.1210.39
248_V462_A1.1170.39
48_Y454_Q1.1150.39
396_C432_L1.1140.39
210_G320_R1.1120.39
209_R335_N1.1120.39
212_E503_A1.1100.39
197_M403_V1.1090.38
385_P442_F1.1060.38
364_M367_V1.1030.38
138_N192_Y1.1020.38
57_K220_F1.0840.37
196_A276_E1.0830.37
6_D13_A1.0790.37
87_Y166_M1.0750.37
274_W388_W1.0730.37
189_M295_L1.0700.36
481_L485_F1.0600.36
65_L71_L1.0560.36
480_G484_L1.0490.35
4_V8_S1.0490.35
268_P285_A1.0470.35
323_M347_L1.0470.35
106_L132_L1.0470.35
229_L233_G1.0420.35
122_N125_Q1.0370.35
50_D502_S1.0370.35
375_A378_G1.0370.35
263_E303_P1.0350.35
481_L496_Y1.0300.34
260_W277_Q1.0270.34
27_L139_L1.0250.34
463_H471_L1.0240.34
36_M51_M1.0240.34
280_E308_K1.0230.34
280_E311_M1.0200.34
403_V426_A1.0110.33
48_Y401_L1.0100.33
231_I400_L1.0100.33
273_A383_V1.0090.33
410_Q422_V1.0060.33
404_M426_A1.0050.33
415_K419_H1.0050.33
361_A371_Q1.0020.33
229_L250_P1.0020.33
17_L157_A1.0010.33
471_L475_L1.0010.33
251_V454_Q0.9970.33
4_V471_L0.9950.33
291_L309_N0.9930.33
48_Y251_V0.9920.33
108_S235_L0.9840.32
367_V372_Y0.9830.32
111_V453_I0.9790.32
427_L430_L0.9780.32
287_K296_A0.9750.32
157_A166_M0.9710.32
110_F132_L0.9700.31
481_L497_A0.9700.31
48_Y57_K0.9690.31
48_Y108_S0.9680.31
129_V132_L0.9670.31
232_I434_W0.9650.31
305_P309_N0.9620.31
330_E340_V0.9600.31
235_L400_L0.9570.31
197_M433_P0.9510.31
233_G250_P0.9500.31
239_D243_Y0.9490.31
206_Y501_P0.9470.30
46_T49_R0.9450.30
108_S496_Y0.9420.30
91_I486_L0.9400.30
46_T205_W0.9400.30
453_I486_L0.9380.30
377_R380_I0.9340.30
41_V127_L0.9320.30
402_L406_I0.9310.30
389_S442_F0.9290.30
476_I479_V0.9270.29
255_A386_V0.9270.29
120_R425_M0.9260.29
158_H209_R0.9240.29
131_W394_V0.9230.29
369_A372_Y0.9220.29
149_G420_R0.9220.29
259_E304_V0.9210.29
14_L18_Y0.9190.29
335_N340_V0.9150.29
31_F138_N0.9150.29
137_S194_T0.9100.29
286_L395_G0.9050.28
7_L10_W0.9050.28
8_S11_Q0.9040.28
49_R53_R0.9030.28
116_F131_W0.9020.28
462_A467_T0.8990.28
472_A476_I0.8990.28
137_S498_R0.8970.28
34_A195_G0.8940.28
475_L488_A0.8930.28
32_L175_V0.8930.28
65_L68_A0.8910.28
387_F404_M0.8870.28
224_S407_A0.8870.28
34_A139_L0.8840.28
280_E377_R0.8830.28
349_G366_H0.8820.27
6_D10_W0.8820.27
65_L94_A0.8790.27
310_L315_Y0.8760.27
380_I456_I0.8760.27
201_A424_K0.8740.27
391_R395_G0.8680.27
82_S443_M0.8640.27
73_M202_I0.8620.27
395_G398_S0.8620.27
134_A142_L0.8590.26
13_A65_L0.8590.26
71_L430_L0.8590.26
57_K79_T0.8570.26
259_E263_E0.8570.26
71_L488_A0.8560.26
189_M233_G0.8550.26
271_V284_F0.8540.26
48_Y222_I0.8530.26
17_L413_R0.8520.26
33_L195_G0.8500.26
108_S248_V0.8500.26
205_W428_W0.8470.26
47_I51_M0.8450.26
133_V470_Q0.8450.26
243_Y247_Q0.8450.26
31_F133_V0.8440.26
71_L423_L0.8420.26
322_R354_G0.8400.26
49_R212_E0.8400.26
198_F493_M0.8390.26
399_L403_V0.8380.26
334_G340_V0.8360.25
137_S437_I0.8350.25
339_H469_G0.8330.25
484_L488_A0.8330.25
110_F143_W0.8320.25
250_P454_Q0.8290.25
268_P287_K0.8230.25
210_G418_Q0.8220.25
102_M142_L0.8210.25
31_F217_L0.8200.25
149_G240_S0.8200.25
491_Y495_K0.8200.25
135_F258_G0.8200.25
31_F116_F0.8150.25
10_W475_L0.8150.25
123_K215_V0.8130.25
240_S243_Y0.8120.24
342_Q484_L0.8120.24
237_L250_P0.8120.24
100_A478_I0.8110.24
204_A422_V0.8070.24
9_R13_A0.8010.24
385_P446_F0.8000.24
79_T108_S0.8000.24
46_T484_L0.7980.24
48_Y474_S0.7950.24
321_G324_A0.7920.24
285_A292_L0.7910.24
276_E281_R0.7900.24
410_Q478_I0.7880.24
270_H284_F0.7880.24
253_L309_N0.7870.23
472_A475_L0.7860.23
461_S465_A0.7860.23
260_W282_N0.7850.23
346_G402_L0.7800.23
305_P313_E0.7790.23
14_L475_L0.7770.23
217_L462_A0.7760.23
198_F202_I0.7760.23
461_S477_M0.7720.23
259_E296_A0.7720.23
333_Q367_V0.7700.23
231_I246_A0.7700.23
220_F224_S0.7700.23
479_V483_T0.7690.23
21_L489_E0.7680.23
495_K499_L0.7660.23
160_D168_M0.7660.23
245_V256_M0.7650.23
7_L475_L0.7640.23
400_L404_M0.7640.23
4_V172_S0.7640.23
304_V334_G0.7640.23
356_L375_A0.7620.22
58_L493_M0.7620.22
421_W426_A0.7600.22
56_G114_F0.7600.22
331_I335_N0.7590.22
320_R350_D0.7570.22
494_Q499_L0.7560.22
155_T485_F0.7530.22
173_E369_A0.7530.22
296_A408_L0.7510.22
312_A380_I0.7500.22
282_N412_L0.7490.22
352_G356_L0.7470.22
113_L125_Q0.7450.22
247_Q250_P0.7430.22
82_S461_S0.7420.22
343_A346_G0.7420.22
82_S389_S0.7400.22
46_T212_E0.7390.22
141_A180_S0.7380.22
329_Q333_Q0.7360.22
57_K108_S0.7350.21
392_I427_L0.7340.21
65_L247_Q0.7330.21
10_W14_L0.7310.21
474_S491_Y0.7300.21
146_N176_F0.7300.21
263_E287_K0.7290.21
189_M474_S0.7290.21
486_L490_V0.7270.21
91_I168_M0.7260.21
49_R363_D0.7250.21
82_S481_L0.7250.21
199_I203_S0.7240.21
453_I471_L0.7220.21
79_T486_L0.7200.21
73_M101_L0.7180.21
34_A225_V0.7170.21
50_D57_K0.7160.21
295_L298_H0.7150.21
46_T196_A0.7140.21
94_A152_Q0.7140.21
123_K213_R0.7120.21
176_F383_V0.7110.21
208_L420_R0.7100.21
150_W241_S0.7090.21
371_Q374_A0.7080.20
30_I137_S0.7070.20
51_M493_M0.7060.20
294_I298_H0.7050.20
8_S12_F0.7040.20
73_M217_L0.7030.20
220_F462_A0.7020.20
405_L409_V0.7010.20
182_V240_S0.6990.20
38_T53_R0.6990.20
149_G177_N0.6990.20
275_P388_W0.6980.20
131_W454_Q0.6980.20
57_K215_V0.6980.20
52_T71_L0.6980.20
270_H304_V0.6960.20
44_G493_M0.6960.20
321_G391_R0.6960.20
196_A231_I0.6940.20
339_H342_Q0.6940.20
142_L495_K0.6940.20
176_F217_L0.6940.20
88_V91_I0.6920.20
404_M460_Y0.6910.20
120_R320_R0.6910.20
38_T127_L0.6900.20
120_R223_G0.6860.20
135_F172_S0.6860.20
203_S219_S0.6860.20
17_L438_E0.6850.20
82_S195_G0.6840.20
123_K135_F0.6830.20
351_L357_L0.6830.20
45_K214_N0.6830.20
331_I406_I0.6830.20
337_E371_Q0.6830.20
212_E493_M0.6830.20
205_W220_F0.6830.20
452_A479_V0.6820.20
209_R490_V0.6820.20
290_A463_H0.6810.20
336_R340_V0.6800.19
355_M358_S0.6800.19
468_T471_L0.6780.19
146_N180_S0.6780.19
232_I272_V0.6730.19
201_A488_A0.6730.19
329_Q488_A0.6730.19
105_F143_W0.6720.19
293_G302_K0.6720.19
47_I218_R0.6710.19
38_T106_L0.6710.19
134_A192_Y0.6710.19
129_V135_F0.6710.19
233_G236_Q0.6700.19
34_A38_T0.6690.19
284_F388_W0.6690.19
399_L489_E0.6680.19
271_V288_I0.6680.19
462_A466_L0.6680.19
33_L57_K0.6650.19
384_A466_L0.6640.19
343_A347_L0.6630.19
108_S132_L0.6630.19
259_E307_L0.6620.19
65_L488_A0.6620.19
158_H231_I0.6620.19
108_S189_M0.6620.19
192_Y226_F0.6600.19
347_L370_A0.6600.19
471_L474_S0.6590.19
245_V452_A0.6580.19
170_S313_E0.6580.19
214_N379_A0.6560.19
338_P346_G0.6550.19
95_P98_M0.6550.19
322_R364_M0.6540.19
202_I465_A0.6530.19
256_M305_P0.6520.19
317_R356_L0.6500.18
315_Y324_A0.6490.18
35_I222_I0.6490.18
31_F35_I0.6490.18
174_L310_L0.6490.18
271_V392_I0.6490.18
442_F473_F0.6480.18
248_V310_L0.6480.18
53_R123_K0.6480.18
146_N380_I0.6480.18
182_V259_E0.6480.18
179_V193_V0.6470.18
30_I49_R0.6470.18
288_I331_I0.6470.18
42_V250_P0.6460.18
419_H423_L0.6450.18
100_A459_T0.6440.18
273_A414_G0.6440.18
403_V429_S0.6430.18
185_V236_Q0.6430.18
261_Q281_R0.6420.18
68_A504_M0.6400.18
422_V426_A0.6400.18
386_V442_F0.6390.18
210_G214_N0.6390.18
461_S489_E0.6390.18
53_R212_E0.6380.18
270_H391_R0.6380.18
212_E348_E0.6370.18
17_L395_G0.6370.18
251_V311_M0.6370.18
301_D375_A0.6360.18
274_W282_N0.6360.18
182_V231_I0.6360.18
36_M52_T0.6360.18
380_I389_S0.6350.18
462_A465_A0.6350.18
329_Q486_L0.6340.18
82_S245_V0.6330.18
256_M443_M0.6330.18
369_A373_Q0.6330.18
11_Q16_A0.6320.18
149_G459_T0.6320.18
294_I310_L0.6310.18
170_S438_E0.6310.18
231_I436_A0.6310.18
220_F223_G0.6300.18
398_S402_L0.6300.18
34_A302_K0.6300.18
131_W225_V0.6300.18
183_K241_S0.6300.18
320_R323_M0.6290.18
49_R427_L0.6290.18
253_L296_A0.6290.18
373_Q379_A0.6280.18
226_F403_V0.6270.18
160_D196_A0.6270.18
161_I396_C0.6270.18
191_G199_I0.6270.18
245_V386_V0.6260.18
133_V258_G0.6260.18
11_Q15_T0.6260.18
407_A427_L0.6240.18
246_A454_Q0.6210.18
200_M220_F0.6200.17
316_P345_R0.6200.17
331_I422_V0.6200.17
128_L314_T0.6170.17
193_V231_I0.6170.17
274_W418_Q0.6170.17
49_R349_G0.6160.17
456_I483_T0.6160.17
172_S292_L0.6160.17
174_L205_W0.6150.17
30_I146_N0.6140.17
36_M56_G0.6140.17
173_E294_I0.6140.17
344_F489_E0.6140.17
108_S307_L0.6130.17
246_A401_L0.6130.17
273_A285_A0.6130.17
205_W309_N0.6130.17
168_M462_A0.6120.17
35_I408_L0.6120.17
128_L296_A0.6110.17
272_V487_I0.6070.17
38_T348_E0.6060.17
385_P410_Q0.6060.17
215_V497_A0.6060.17
204_A423_L0.6060.17
207_L304_V0.6050.17
202_I474_S0.6040.17
228_T408_L0.6020.17
6_D495_K0.5990.17
373_Q377_R0.5990.17
268_P286_L0.5990.17
225_V295_L0.5980.17
396_C455_D0.5970.17
416_I473_F0.5970.17
247_Q454_Q0.5970.17
242_A391_R0.5960.17
18_Y27_L0.5960.17
82_S462_A0.5960.17
258_G270_H0.5950.17
139_L199_I0.5950.17
258_G307_L0.5950.17
232_I401_L0.5930.17
471_L476_I0.5920.17
123_K420_R0.5920.17
317_R350_D0.5920.17
276_E302_K0.5910.17
386_V446_F0.5910.17
146_N384_A0.5910.17
455_D496_Y0.5890.17
395_G416_I0.5870.16
111_V137_S0.5870.16
271_V287_K0.5860.16
128_L261_Q0.5850.16
5_I239_D0.5850.16
246_A400_L0.5850.16
153_Y271_V0.5840.16
20_F192_Y0.5840.16
349_G422_V0.5840.16
162_D432_L0.5830.16
32_L199_I0.5830.16
253_L489_E0.5830.16
189_M240_S0.5820.16
65_L487_I0.5780.16
167_E187_T0.5780.16
45_K202_I0.5780.16
269_F443_M0.5780.16
274_W395_G0.5770.16
72_T461_S0.5770.16
174_L416_I0.5750.16
253_L304_V0.5750.16
33_L134_A0.5750.16
228_T405_L0.5740.16
5_I218_R0.5740.16
188_V269_F0.5740.16
79_T489_E0.5730.16
281_R284_F0.5730.16
52_T213_R0.5720.16
111_V173_E0.5720.16
131_W304_V0.5720.16
91_I407_A0.5710.16
31_F504_M0.5700.16
24_P28_G0.5700.16
134_A191_G0.5700.16
42_V153_Y0.5700.16
172_S288_I0.5690.16
460_Y463_H0.5690.16
194_T271_V0.5680.16
124_Y408_L0.5670.16
172_S302_K0.5670.16
36_M188_V0.5670.16
316_P342_Q0.5650.16
245_V427_L0.5650.16
176_F230_A0.5640.16
6_D212_E0.5640.16
68_A225_V0.5640.16
378_G460_Y0.5630.16
317_R324_A0.5620.16
494_Q498_R0.5610.16
101_L293_G0.5600.16
214_N320_R0.5590.16
178_P247_Q0.5570.16
273_A281_R0.5570.16
204_A453_I0.5560.16
274_W280_E0.5540.15
259_E305_P0.5540.15
91_I119_Q0.5530.15
17_L43_T0.5530.15
146_N468_T0.5520.15
53_R211_R0.5510.15
108_S327_L0.5510.15
202_I395_G0.5490.15
12_F19_H0.5490.15
87_Y299_S0.5490.15
161_I504_M0.5480.15
471_L485_F0.5480.15
272_V287_K0.5460.15
202_I502_S0.5460.15
19_H23_V0.5450.15
489_E492_L0.5440.15
453_I463_H0.5430.15
277_Q385_P0.5430.15
242_A327_L0.5430.15
53_R494_Q0.5420.15
391_R464_S0.5420.15
156_G174_L0.5420.15
241_S443_M0.5400.15
64_A493_M0.5400.15
353_Y357_L0.5400.15
87_Y293_G0.5390.15
389_S494_Q0.5390.15
322_R363_D0.5380.15
5_I8_S0.5370.15
222_I455_D0.5360.15
272_V392_I0.5360.15
184_F397_G0.5350.15
39_I222_I0.5350.15
42_V229_L0.5340.15
76_Q131_W0.5340.15
342_Q346_G0.5330.15
94_A496_Y0.5330.15
270_H287_K0.5330.15
244_E304_V0.5330.15
221_A411_T0.5320.15
349_G374_A0.5310.15
8_S13_A0.5310.15
221_A410_Q0.5290.15
106_L236_Q0.5290.15
60_G111_V0.5280.15
4_V116_F0.5270.15
76_Q298_H0.5260.15
273_A287_K0.5260.15
48_Y220_F0.5250.15
50_D503_A0.5250.15
48_Y497_A0.5240.15
168_M176_F0.5240.15
179_V386_V0.5230.15
191_G424_K0.5230.15
65_L401_L0.5230.15
312_A495_K0.5210.15
316_P406_I0.5190.14
172_S403_V0.5190.14
68_A212_E0.5190.14
39_I42_V0.5190.14
307_L329_Q0.5180.14
320_R343_A0.5180.14
215_V504_M0.5180.14
292_L499_L0.5180.14
9_R19_H0.5170.14
272_V316_P0.5150.14
320_R403_V0.5140.14
14_L471_L0.5140.14
307_L383_V0.5140.14
31_F474_S0.5130.14
52_T134_A0.5130.14
223_G285_A0.5130.14
354_G504_M0.5120.14
201_A490_V0.5110.14
374_A385_P0.5110.14
33_L321_G0.5110.14
225_V416_I0.5110.14
274_W345_R0.5110.14
71_L204_A0.5100.14
497_A502_S0.5080.14
49_R202_I0.5070.14
452_A460_Y0.5070.14
39_I229_L0.5060.14
34_A134_A0.5060.14
322_R357_L0.5040.14
205_W413_R0.5040.14
470_Q474_S0.5030.14
42_V233_G0.5020.14
68_A160_D0.5020.14
168_M487_I0.5020.14
91_I462_A0.5010.14
264_P374_A0.5000.14
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1mnnA 1 0.1342 41.2 0.986 Contact Map
4nv5A 1 0.4883 17.7 0.989 Contact Map
2k1kA 2 0.072 11.1 0.99 Contact Map
3mk7A 1 0.3794 9.1 0.99 Contact Map
2g0uA 1 0.179 8.3 0.99 Contact Map
2ju0B 1 0.0934 7.1 0.991 Contact Map
4pw2A 2 0.1265 6.1 0.991 Contact Map
2ks1B 1 0.0837 6 0.991 Contact Map
4or2A 2 0.3872 5.7 0.991 Contact Map
2l2tA 2 0.0798 5.7 0.991 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0131 seconds.