GREMLIN Database
YIDC - Membrane protein insertase YidC
UniProt: P25714 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11197
Length: 548 (508)
Sequences: 1987 (1436)
Seq/√Len: 63.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
407_E410_A6.7951.00
351_V360_I5.2411.00
410_A414_A5.0441.00
391_Q394_R4.7691.00
64_K85_P4.5471.00
356_F451_F4.2421.00
342_K346_W4.1801.00
386_L417_V4.1531.00
389_K392_A4.0531.00
394_R398_G3.8311.00
393_M404_I3.7481.00
343_L364_I3.4341.00
64_K69_D3.3891.00
391_Q395_E3.3791.00
472_G503_T3.3551.00
347_I360_I3.2971.00
162_T179_N3.1641.00
72_I151_M3.1081.00
82_A309_V3.0671.00
369_M432_I2.9981.00
356_F452_A2.9401.00
403_R407_E2.8231.00
347_I364_I2.7821.00
70_L82_A2.7431.00
65_T167_L2.6951.00
403_R406_Q2.6741.00
394_R404_I2.5511.00
402_Q406_Q2.5421.00
356_F360_I2.4991.00
346_W350_F2.4851.00
387_Q391_Q2.4711.00
261_A327_T2.4671.00
470_L518_I2.4611.00
166_V177_N2.4531.00
467_L515_L2.3471.00
69_D83_L2.3421.00
296_Q299_Q2.3311.00
347_I351_V2.3291.00
70_L79_V2.3161.00
392_A396_R2.3081.00
62_S69_D2.3061.00
381_A384_R2.1941.00
397_L403_R2.1851.00
168_K175_N2.1851.00
160_T181_Q2.1651.00
404_I408_M2.1541.00
67_V86_A2.1521.00
177_N304_N2.1501.00
70_L167_L2.1491.00
7_L11_A2.1161.00
77_G151_M2.1091.00
356_F359_I2.0761.00
63_V167_L2.0671.00
474_T521_N2.0441.00
173_A320_V2.0371.00
71_T81_Q2.0261.00
60_L71_T2.0081.00
490_M494_I1.9731.00
398_G404_I1.9361.00
134_E152_T1.9191.00
63_V72_I1.9191.00
234_K237_T1.8841.00
152_T162_T1.8651.00
179_N302_A1.8551.00
60_L80_E1.8461.00
164_T179_N1.8201.00
448_Q460_A1.8171.00
340_L365_V1.8171.00
162_T181_Q1.8021.00
62_S71_T1.7951.00
308_W316_K1.7941.00
150_P164_T1.7841.00
530_L534_G1.7831.00
196_L307_L1.7811.00
61_I74_T1.7781.00
485_T492_Q1.7741.00
69_D85_P1.7641.00
369_M428_I1.7491.00
83_L98_Q1.7440.99
24_E27_K1.7430.99
406_Q410_A1.7390.99
360_I364_I1.7280.99
400_D403_R1.7060.99
497_F500_V1.7000.99
364_I368_I1.6920.99
363_F523_V1.6870.99
58_G73_N1.6840.99
480_K496_T1.6740.99
371_P375_A1.6730.99
470_L474_T1.6720.99
359_I519_V1.6520.99
148_Q164_T1.6510.99
360_I363_F1.6430.99
526_I530_L1.6340.99
389_K415_E1.6300.99
173_A306_T1.6260.99
393_M408_M1.6220.99
390_I393_M1.6170.99
344_L357_S1.6110.99
398_G401_K1.6070.99
66_D170_G1.6040.99
501_I505_F1.5780.99
351_V356_F1.5770.99
177_N302_A1.5720.99
275_Y287_G1.5670.99
254_A327_T1.5630.99
9_V13_L1.5620.99
469_I500_V1.5490.99
64_K139_V1.5480.99
497_F501_I1.5460.99
24_E28_N1.5320.99
148_Q166_V1.5120.99
250_G269_D1.5050.98
68_L82_A1.4950.98
30_Q33_A1.4880.98
522_L526_I1.4830.98
493_K497_F1.4580.98
31_P34_Q1.4580.98
375_A378_T1.4580.98
181_Q300_T1.4520.98
490_M493_K1.4390.98
473_V477_F1.4330.98
469_I473_V1.4270.98
401_K404_I1.4220.98
164_T177_N1.4170.98
20_W24_E1.4100.98
166_V175_N1.4100.98
160_T183_A1.4090.98
7_L14_F1.4060.98
343_L368_I1.4030.98
359_I515_L1.4020.98
17_F21_Q1.3830.97
315_D345_K1.3700.97
407_E414_A1.3640.97
87_Y313_I1.3570.97
81_Q98_Q1.3560.97
19_I22_A1.3550.97
365_V436_L1.3530.97
432_I523_V1.3510.97
366_R369_M1.3330.97
401_K405_S1.3320.97
382_K385_M1.3200.96
500_V503_T1.3170.96
113_G193_F1.3150.96
32_Q35_Q1.3130.96
365_V428_I1.3100.96
476_F496_T1.3090.96
67_V171_D1.3050.96
148_Q177_N1.3040.96
478_I525_I1.3000.96
163_K178_Y1.2980.96
73_N80_E1.2940.96
372_L510_P1.2910.96
392_A401_K1.2850.96
351_V357_S1.2710.96
108_Y262_T1.2670.96
141_A146_E1.2670.96
68_L167_L1.2650.96
154_T160_T1.2620.95
434_L438_Y1.2460.95
100_L262_T1.2440.95
35_Q38_Q1.2440.95
495_M506_F1.2440.95
393_M397_L1.2430.95
165_F176_V1.2410.95
175_N304_N1.2360.95
395_E398_G1.2350.95
87_Y444_V1.2300.95
9_V12_L1.2240.95
313_I316_K1.2240.95
529_Q533_R1.2230.95
476_F480_K1.2200.95
316_K319_A1.2190.95
471_M503_T1.2170.94
455_I467_L1.2160.94
67_V172_Y1.2120.94
86_A172_Y1.2070.94
37_T40_T1.2030.94
168_K171_D1.2010.94
214_A217_T1.1980.94
11_A15_V1.1870.94
129_P153_Y1.1750.93
79_V165_F1.1710.93
9_V16_S1.1700.93
493_K496_T1.1660.93
426_L430_M1.1620.93
189_E294_L1.1560.93
216_H219_R1.1510.93
347_I357_S1.1470.93
503_T507_L1.1450.92
116_G120_P1.1370.92
492_Q496_T1.1370.92
23_W27_K1.1350.92
346_W349_S1.1330.92
58_G75_R1.1270.92
392_A395_E1.1240.92
393_M411_L1.1180.92
30_Q34_Q1.1180.92
335_F339_P1.1170.91
376_Q380_M1.1170.91
373_T376_Q1.1160.91
509_F517_Y1.1160.91
460_A511_S1.1130.91
179_N300_T1.1000.91
438_Y442_G1.0980.91
150_P162_T1.0930.91
89_K95_Q1.0900.90
330_Y341_F1.0810.90
134_E162_T1.0730.90
348_H352_G1.0690.90
68_L79_V1.0640.89
471_M478_I1.0630.89
236_D240_D1.0560.89
393_M398_G1.0440.88
461_Q507_L1.0430.88
213_F216_H1.0420.88
323_H326_L1.0390.88
72_I149_V1.0380.88
110_A307_L1.0350.88
72_I165_F1.0320.88
336_I340_L1.0300.88
286_I290_S1.0270.88
75_R130_L1.0240.87
457_D499_P1.0220.87
19_I23_W1.0200.87
340_L361_I1.0190.87
14_F18_M1.0150.87
410_A413_K1.0150.87
376_Q520_S1.0120.87
61_I133_V1.0070.87
386_L393_M1.0060.87
196_L262_T1.0050.86
408_M412_Y1.0020.86
432_I436_L0.9980.86
345_K349_S0.9870.85
58_G74_T0.9870.85
25_Q28_N0.9850.85
72_I167_L0.9830.85
472_G475_M0.9820.85
167_L174_V0.9810.85
133_V152_T0.9800.85
239_A284_A0.9760.85
77_G163_K0.9750.85
91_L456_H0.9740.85
390_I408_M0.9740.85
482_S485_T0.9700.84
500_V504_V0.9690.84
7_L435_A0.9670.84
187_P296_Q0.9620.84
29_P32_Q0.9570.84
515_L519_V0.9530.83
263_A327_T0.9530.83
340_L428_I0.9520.83
152_T160_T0.9470.83
260_F311_P0.9450.83
359_I452_A0.9440.83
518_I522_L0.9400.83
366_R520_S0.9380.82
435_A439_M0.9380.82
221_A224_S0.9370.82
430_M433_F0.9360.82
60_L74_T0.9330.82
294_L297_P0.9300.82
359_I474_T0.9270.82
89_K97_F0.9260.82
36_T39_T0.9240.81
81_Q101_E0.9240.81
488_D491_Q0.9240.81
377_Y381_A0.9230.81
175_N306_T0.9190.81
172_Y311_P0.9170.81
133_V136_D0.9170.81
68_L174_V0.9020.80
347_I350_F0.9020.80
502_F505_F0.9020.80
28_N32_Q0.8990.80
520_S524_T0.8930.79
424_F427_L0.8920.79
456_H461_Q0.8790.78
454_W515_L0.8780.78
354_W446_L0.8780.78
221_A238_I0.8770.78
499_P528_Q0.8770.78
110_A196_L0.8760.78
376_Q532_Y0.8720.78
433_F436_L0.8720.78
150_P179_N0.8710.78
185_E297_P0.8690.77
88_P448_Q0.8680.77
369_M523_V0.8680.77
13_L16_S0.8660.77
220_G224_S0.8650.77
212_N215_L0.8630.77
111_Q195_Q0.8600.77
12_L16_S0.8600.77
56_G130_L0.8590.77
348_H357_S0.8560.76
261_A317_M0.8540.76
453_L456_H0.8530.76
263_A324_L0.8530.76
374_K432_I0.8530.76
67_V170_G0.8520.76
394_R481_M0.8490.76
357_S451_F0.8490.76
87_Y448_Q0.8490.76
369_M520_S0.8410.75
312_E442_G0.8400.75
21_Q25_Q0.8400.75
63_V149_V0.8390.75
426_L517_Y0.8340.74
33_A37_T0.8330.74
526_I529_Q0.8330.74
504_V508_W0.8330.74
220_G223_Y0.8320.74
72_I79_V0.8310.74
434_L439_M0.8280.74
430_M434_L0.8260.74
374_K378_T0.8250.74
430_M478_I0.8250.74
470_L522_L0.8240.73
65_T68_L0.8240.73
98_Q101_E0.8190.73
376_Q478_I0.8180.73
29_P33_A0.8150.73
187_P297_P0.8150.73
251_G415_E0.8060.72
74_T151_M0.8040.72
386_L479_Q0.8030.72
142_E146_E0.8030.72
90_E95_Q0.8010.71
343_L346_W0.8000.71
413_K528_Q0.7950.71
343_L361_I0.7930.71
382_K469_I0.7910.70
39_T42_T0.7890.70
348_H354_W0.7890.70
14_F20_W0.7850.70
329_D438_Y0.7850.70
184_G298_G0.7850.70
314_Q330_Y0.7850.70
474_T525_I0.7790.69
6_N9_V0.7780.69
437_Y509_F0.7780.69
386_L398_G0.7730.69
393_M428_I0.7720.69
396_R407_E0.7720.69
362_T371_P0.7720.69
380_M471_M0.7710.68
332_W476_F0.7690.68
23_W28_N0.7680.68
217_T220_G0.7680.68
481_M485_T0.7670.68
8_L12_L0.7660.68
34_Q38_Q0.7660.68
171_D316_K0.7650.68
472_G479_Q0.7640.68
146_E168_K0.7570.67
224_S334_W0.7570.67
7_L10_I0.7560.67
250_G267_H0.7550.67
172_Y252_W0.7530.67
350_F360_I0.7530.67
370_Y482_S0.7490.66
252_W447_R0.7490.66
13_L17_F0.7490.66
327_T330_Y0.7480.66
467_L518_I0.7460.66
478_I520_S0.7460.66
523_V528_Q0.7450.66
11_A14_F0.7440.66
82_A97_F0.7430.66
172_Y447_R0.7420.65
377_Y532_Y0.7410.65
417_V524_T0.7400.65
362_T480_K0.7380.65
159_N188_L0.7380.65
373_T524_T0.7370.65
10_I13_L0.7370.65
88_P94_T0.7360.65
220_G232_K0.7350.65
437_Y441_M0.7350.65
353_N454_W0.7350.65
153_Y161_F0.7340.65
6_N13_L0.7340.65
366_R524_T0.7340.65
239_A278_N0.7330.65
368_I371_P0.7330.65
484_T487_T0.7310.64
5_R8_L0.7300.64
155_D161_F0.7300.64
34_Q39_T0.7280.64
59_K136_D0.7270.64
316_K320_V0.7250.64
32_Q36_T0.7220.63
61_I165_F0.7210.63
370_Y530_L0.7200.63
365_V505_F0.7190.63
40_T245_N0.7190.63
380_M527_Q0.7180.63
13_L473_V0.7180.63
372_L376_Q0.7170.63
469_I501_I0.7160.63
225_T248_S0.7150.63
359_I451_F0.7140.62
71_T80_E0.7130.62
479_Q482_S0.7100.62
461_Q464_Y0.7090.62
77_G396_R0.7080.62
376_Q529_Q0.7080.62
390_I411_L0.7080.62
498_M501_I0.7070.62
517_Y521_N0.7070.62
265_I306_T0.7060.62
389_K414_A0.7060.62
439_M517_Y0.7060.62
293_V301_G0.7040.61
452_A456_H0.7030.61
12_L15_V0.7010.61
59_K74_T0.7000.61
380_M483_P0.7000.61
341_F443_S0.6990.61
135_K149_V0.6980.61
411_L414_A0.6960.61
471_M525_I0.6960.61
173_A265_I0.6960.61
221_A255_M0.6940.60
93_S96_P0.6930.60
393_M400_D0.6910.60
376_Q405_S0.6900.60
487_T492_Q0.6890.60
393_M407_E0.6890.60
417_V479_Q0.6880.60
270_G273_N0.6880.60
291_Q474_T0.6870.60
82_A167_L0.6870.60
10_I21_Q0.6860.59
340_L439_M0.6840.59
377_Y384_R0.6830.59
66_D142_E0.6830.59
381_A532_Y0.6820.59
370_Y374_K0.6820.59
376_Q471_M0.6820.59
482_S487_T0.6800.59
54_A185_E0.6780.58
412_Y418_N0.6770.58
83_L96_P0.6770.58
364_I519_V0.6760.58
403_R413_K0.6760.58
35_Q39_T0.6750.58
30_Q40_T0.6750.58
477_F522_L0.6750.58
471_M524_T0.6750.58
478_I482_S0.6740.58
525_I529_Q0.6740.58
376_Q482_S0.6740.58
89_K93_S0.6730.58
218_F221_A0.6730.58
236_D239_A0.6710.58
366_R523_V0.6700.58
324_L434_L0.6690.57
34_Q37_T0.6690.57
33_A36_T0.6690.57
465_Y507_L0.6680.57
489_P493_K0.6680.57
141_A147_L0.6670.57
341_F439_M0.6650.57
273_N428_I0.6640.57
348_H351_V0.6620.57
101_E106_F0.6610.57
35_Q42_T0.6590.56
392_A511_S0.6590.56
75_R128_R0.6590.56
373_T417_V0.6580.56
365_V408_M0.6570.56
217_T441_M0.6560.56
391_Q398_G0.6560.56
224_S323_H0.6560.56
490_M495_M0.6550.56
488_D493_K0.6550.56
36_T41_T0.6540.56
383_M393_M0.6540.56
180_V303_M0.6530.56
440_L503_T0.6530.56
101_E336_I0.6520.56
29_P34_Q0.6500.55
483_P495_M0.6480.55
465_Y506_F0.6470.55
261_A308_W0.6470.55
370_Y534_G0.6470.55
4_Q333_L0.6470.55
317_M320_V0.6470.55
482_S528_Q0.6460.55
260_F447_R0.6440.55
15_V19_I0.6430.55
344_L440_L0.6430.55
139_V390_I0.6420.54
365_V373_T0.6410.54
373_T377_Y0.6400.54
125_N129_P0.6400.54
31_P35_Q0.6390.54
308_W317_M0.6370.54
461_Q465_Y0.6360.54
255_M290_S0.6340.53
198_Q255_M0.6340.53
55_S75_R0.6340.53
357_S435_A0.6330.53
339_P509_F0.6330.53
385_M451_F0.6320.53
32_Q37_T0.6320.53
293_V296_Q0.6310.53
38_Q136_D0.6300.53
392_A494_I0.6300.53
259_Y439_M0.6300.53
224_S386_L0.6290.53
340_L368_I0.6290.53
177_N268_N0.6260.53
366_R440_L0.6250.52
295_V301_G0.6230.52
347_I396_R0.6220.52
255_M453_L0.6210.52
479_Q503_T0.6200.52
213_F217_T0.6200.52
282_G286_I0.6180.52
477_F480_K0.6170.52
495_M500_V0.6170.52
261_A496_T0.6160.51
254_A438_Y0.6160.51
86_A89_K0.6150.51
38_Q41_T0.6150.51
163_K176_V0.6140.51
224_S229_K0.6140.51
219_R230_Y0.6130.51
412_Y419_P0.6130.51
150_P153_Y0.6130.51
264_W305_S0.6110.51
469_I503_T0.6100.51
134_E150_P0.6100.51
62_S139_V0.6100.51
33_A368_I0.6100.51
336_I523_V0.6100.51
324_L482_S0.6100.51
66_D147_L0.6090.51
185_E298_G0.6090.51
361_I365_V0.6090.51
209_G212_N0.6080.50
402_Q474_T0.6080.50
314_Q328_V0.6080.50
378_T382_K0.6070.50
112_S307_L0.6070.50
62_S501_I0.6060.50
63_V466_I0.6030.50
40_T54_A0.6020.50
488_D495_M0.6020.50
161_F285_A0.6020.50
34_Q40_T0.6020.50
258_Q438_Y0.6000.50
27_K30_Q0.6000.50
252_W265_I0.6000.50
9_V24_E0.5980.49
253_V276_T0.5970.49
154_T159_N0.5970.49
125_N153_Y0.5970.49
521_N524_T0.5960.49
314_Q317_M0.5960.49
258_Q442_G0.5950.49
435_A507_L0.5950.49
267_H306_T0.5950.49
376_Q432_I0.5950.49
258_Q443_S0.5940.49
363_F366_R0.5940.49
184_G297_P0.5920.49
11_A37_T0.5920.49
409_M412_Y0.5920.49
4_Q7_L0.5920.49
385_M435_A0.5920.49
6_N10_I0.5910.49
340_L357_S0.5910.49
383_M426_L0.5900.48
367_G390_I0.5890.48
389_K455_I0.5890.48
423_C483_P0.5880.48
237_T268_N0.5870.48
68_L85_P0.5870.48
348_H356_F0.5870.48
132_N186_K0.5860.48
61_I64_K0.5860.48
509_F527_Q0.5860.48
402_Q405_S0.5850.48
116_G119_G0.5850.48
14_F17_F0.5850.48
472_G506_F0.5840.48
318_A322_P0.5840.48
5_R9_V0.5840.48
254_A421_G0.5820.47
405_S496_T0.5820.47
365_V433_F0.5810.47
477_F481_M0.5800.47
275_Y289_K0.5790.47
371_P374_K0.5780.47
509_F514_V0.5770.47
10_I14_F0.5770.47
55_S61_I0.5770.47
18_M228_E0.5770.47
29_P357_S0.5760.47
361_I497_F0.5750.47
22_A26_D0.5750.47
334_W524_T0.5750.47
31_P62_S0.5740.47
451_F472_G0.5740.47
114_L161_F0.5730.46
468_P515_L0.5730.46
524_T533_R0.5720.46
77_G196_L0.5710.46
344_L374_K0.5710.46
191_S289_K0.5710.46
76_G113_G0.5700.46
479_Q498_M0.5690.46
471_M528_Q0.5670.46
358_I516_Y0.5660.46
61_I151_M0.5650.46
191_S292_P0.5650.46
133_V149_V0.5640.45
432_I514_V0.5640.45
388_P423_C0.5640.45
428_I450_P0.5640.45
366_R532_Y0.5640.45
215_L218_F0.5640.45
468_P514_V0.5630.45
465_Y468_P0.5630.45
477_F525_I0.5630.45
311_P447_R0.5630.45
224_S451_F0.5620.45
383_M489_P0.5610.45
308_W320_V0.5610.45
308_W473_V0.5610.45
495_M503_T0.5600.45
463_P468_P0.5590.45
2_D487_T0.5580.45
141_A148_Q0.5570.45
369_M376_Q0.5570.45
87_Y390_I0.5560.44
353_N455_I0.5560.44
474_T477_F0.5550.44
26_D29_P0.5540.44
223_Y244_L0.5540.44
387_Q511_S0.5540.44
182_N366_R0.5530.44
518_I524_T0.5520.44
350_F393_M0.5520.44
254_A263_A0.5510.44
371_P428_I0.5510.44
433_F521_N0.5510.44
433_F472_G0.5500.44
435_A484_T0.5500.44
371_P378_T0.5490.44
154_T157_A0.5480.44
475_M479_Q0.5480.44
447_R517_Y0.5470.43
418_N483_P0.5460.43
32_Q38_Q0.5450.43
259_Y459_S0.5450.43
238_I278_N0.5450.43
495_M509_F0.5450.43
440_L463_P0.5450.43
380_M482_S0.5430.43
178_Y305_S0.5420.43
475_M478_I0.5420.43
29_P35_Q0.5410.43
211_S216_H0.5410.43
27_K366_R0.5410.43
394_R401_K0.5390.43
79_V82_A0.5390.43
61_I149_V0.5390.43
337_S441_M0.5390.43
250_G272_N0.5380.42
224_S228_E0.5380.42
132_N152_T0.5370.42
178_Y340_L0.5360.42
63_V174_V0.5360.42
483_P493_K0.5360.42
126_G131_Y0.5350.42
4_Q376_Q0.5350.42
463_P483_P0.5350.42
369_M514_V0.5340.42
376_Q421_G0.5330.42
271_T278_N0.5320.42
35_Q41_T0.5320.42
162_T177_N0.5320.42
499_P521_N0.5320.42
377_Y447_R0.5320.42
151_M362_T0.5300.42
35_Q40_T0.5300.42
210_S215_L0.5300.42
520_S529_Q0.5300.42
263_A434_L0.5300.42
212_N216_H0.5290.41
176_V264_W0.5280.41
430_M441_M0.5270.41
346_W360_I0.5270.41
261_A340_L0.5270.41
312_E517_Y0.5260.41
506_F518_I0.5260.41
177_N300_T0.5260.41
56_G186_K0.5250.41
455_I514_V0.5250.41
318_A325_D0.5250.41
126_G456_H0.5240.41
369_M378_T0.5240.41
358_I525_I0.5240.41
36_T42_T0.5240.41
377_Y398_G0.5230.41
34_Q41_T0.5200.40
84_L447_R0.5190.40
370_Y378_T0.5190.40
475_M483_P0.5190.40
341_F356_F0.5190.40
291_Q296_Q0.5190.40
324_L524_T0.5180.40
182_N297_P0.5180.40
308_W313_I0.5180.40
334_W405_S0.5180.40
265_I324_L0.5160.40
198_Q219_R0.5160.40
55_S149_V0.5160.40
74_T130_L0.5160.40
482_S523_V0.5160.40
359_I472_G0.5160.40
24_E29_P0.5150.40
380_M419_P0.5150.40
60_L81_Q0.5150.40
354_W365_V0.5150.40
28_N34_Q0.5140.40
412_Y506_F0.5120.40
498_M502_F0.5120.40
494_I509_F0.5110.39
530_L533_R0.5110.39
362_T520_S0.5100.39
421_G478_I0.5100.39
163_K340_L0.5100.39
288_Y291_Q0.5090.39
386_L412_Y0.5090.39
244_L469_I0.5080.39
30_Q69_D0.5070.39
367_G522_L0.5070.39
16_S24_E0.5060.39
142_E145_N0.5060.39
101_E264_W0.5060.39
198_Q257_Q0.5050.39
381_A415_E0.5050.39
480_K484_T0.5040.39
532_Y535_L0.5040.39
59_K280_G0.5030.39
365_V441_M0.5030.39
211_S215_L0.5030.39
521_N531_I0.5030.39
103_S139_V0.5020.38
437_Y495_M0.5010.38
110_A264_W0.5010.38
20_W405_S0.5010.38
92_N203_P0.5010.38
250_G268_N0.5010.38
91_L494_I0.5000.38
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3wvfA 1 0.8212 100 0.215 Contact Map
3wo6A 1 0.3668 100 0.61 Contact Map
3blcA 4 0.5091 100 0.691 Contact Map
3bs6A 3 0.4745 100 0.756 Contact Map
3q1nA 1 0.427 83.2 0.972 Contact Map
1jovA 1 0.427 45.4 0.978 Contact Map
2cirA 1 0.427 44.2 0.978 Contact Map
3dcdA 1 0.4398 40.7 0.979 Contact Map
1ygaA 2 0.4544 39.3 0.979 Contact Map
1yewA 3 0.323 36.3 0.98 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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