MNME - ECOLI - GREMLIN Contacts

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MNME - tRNA modification GTPase MnmE

UniProt:	P25522	Sequences: MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10997
Length:	454 (444)
Sequences:	4635 (3389)
Seq/√Len:	160.8

ECOLI - MNME
BACSU - MNME

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
46_A	65_L	4.455	1.00
20_G	90_L	3.992	1.00
284_I	287_E	3.793	1.00
5_D	104_R	3.739	1.00
28_K	31_E	3.648	1.00
32_V	103_L	3.297	1.00
124_A	153_S	3.228	1.00
73_F	112_S	3.114	1.00
262_D	373_K	3.011	1.00
8_V	94_L	2.916	1.00
246_D	280_E	2.906	1.00
42_K	45_Y	2.801	1.00
235_A	365_V	2.748	1.00
24_I	33_A	2.633	1.00
201_D	400_A	2.604	1.00
371_H	374_Q	2.552	1.00
176_F	452_I	2.479	1.00
75_G	120_K	2.472	1.00
300_L	333_V	2.454	1.00
8_V	97_I	2.437	1.00
30_R	66_W	2.405	1.00
247_I	279_D	2.403	1.00
65_L	82_Q	2.305	1.00
305_G	334_R	2.282	1.00
107_R	113_E	2.282	1.00
302_M	335_N	2.259	1.00
197_I	400_A	2.257	1.00
222_A	293_I	2.239	1.00
57_S	142_R	2.213	1.00
190_E	411_L	2.184	1.00
394_Q	398_Q	2.178	1.00
13_P	17_G	2.177	1.00
162_A	192_Q	2.175	1.00
197_I	404_Q	2.171	1.00
277_A	286_I	2.160	1.00
157_N	436_E	2.145	1.00
155_R	199_D	2.141	1.00
333_V	355_I	2.138	1.00
24_I	97_I	2.120	1.00
353_A	371_H	2.118	1.00
37_L	49_L	2.110	1.00
48_Y	61_Q	2.104	1.00
335_N	359_A	2.052	1.00
194_N	407_K	2.047	1.00
364_G	367_V	2.031	1.00
413_A	417_E	2.015	1.00
445_R	449_S	2.006	1.00
291_Q	295_Q	2.004	1.00
38_G	52_K	1.994	1.00
16_R	134_D	1.957	1.00
6_T	28_K	1.954	1.00
337_A	356_R	1.915	1.00
162_A	195_D	1.904	1.00
254_V	269_I	1.897	1.00
200_L	396_L	1.896	1.00
217_M	376_M	1.882	1.00
235_A	362_G	1.882	1.00
70_P	77_D	1.871	1.00
197_I	407_K	1.870	1.00
160_V	164_T	1.837	1.00
21_I	82_Q	1.824	1.00
46_A	63_I	1.816	1.00
73_F	129_I	1.816	1.00
219_V	266_L	1.808	1.00
220_V	296_A	1.792	1.00
287_E	291_Q	1.772	1.00
51_F	62_G	1.766	1.00
6_T	29_A	1.765	1.00
29_A	79_L	1.756	1.00
231_S	359_A	1.746	1.00
331_T	371_H	1.739	1.00
112_S	129_I	1.726	1.00
298_R	372_L	1.725	1.00
402_H	425_L	1.708	1.00
413_A	416_G	1.705	1.00
132_L	141_A	1.703	1.00
98_L	105_I	1.685	1.00
398_Q	432_E	1.680	1.00
62_G	81_L	1.668	1.00
162_A	199_D	1.653	1.00
400_A	404_Q	1.651	1.00
50_P	58_V	1.641	1.00
35_T	101_P	1.632	1.00
201_D	404_Q	1.626	1.00
201_D	205_A	1.604	1.00
190_E	407_K	1.599	1.00
168_I	445_R	1.587	1.00
63_I	67_F	1.581	1.00
88_V	141_A	1.580	1.00
41_P	66_W	1.553	1.00
283_R	287_E	1.548	1.00
130_A	134_D	1.540	1.00
245_T	281_V	1.540	1.00
398_Q	429_N	1.538	1.00
319_E	322_A	1.527	1.00
300_L	372_L	1.526	1.00
241_A	257_E	1.525	1.00
72_S	75_G	1.498	1.00
233_L	242_A	1.480	1.00
280_E	283_R	1.479	1.00
24_I	81_L	1.471	1.00
131_D	214_R	1.469	1.00
138_E	141_A	1.464	1.00
361_T	364_G	1.461	1.00
10_Q	90_L	1.449	1.00
53_D	57_S	1.436	1.00
29_A	33_A	1.428	1.00
402_H	422_E	1.426	1.00
394_Q	397_E	1.420	1.00
218_K	267_H	1.420	1.00
6_T	32_V	1.419	1.00
238_G	369_R	1.418	1.00
429_N	432_E	1.416	1.00
303_V	332_V	1.414	1.00
43_P	66_W	1.411	1.00
197_I	403_L	1.406	1.00
304_D	307_T	1.401	1.00
405_Q	422_E	1.397	1.00
33_A	79_L	1.392	1.00
262_D	370_N	1.388	1.00
408_A	412_G	1.388	1.00
305_G	340_T	1.382	1.00
311_V	315_E	1.376	1.00
33_A	64_A	1.373	1.00
393_L	397_E	1.358	1.00
193_L	403_L	1.356	1.00
370_N	374_Q	1.343	1.00
141_A	145_L	1.341	1.00
409_Q	422_E	1.336	1.00
41_P	47_D	1.328	1.00
8_V	98_L	1.325	1.00
307_T	310_A	1.324	1.00
298_R	331_T	1.313	1.00
121_L	129_I	1.309	1.00
312_D	315_E	1.308	1.00
254_V	292_E	1.308	1.00
225_P	248_A	1.307	1.00
43_P	68_P	1.302	1.00
161_E	445_R	1.294	1.00
69_G	77_D	1.284	1.00
30_R	68_P	1.283	1.00
334_R	356_R	1.283	1.00
237_A	241_A	1.276	1.00
292_E	295_Q	1.268	1.00
334_R	354_L	1.260	1.00
396_L	400_A	1.255	1.00
137_S	260_H	1.254	1.00
406_G	419_L	1.252	1.00
368_L	372_L	1.250	1.00
402_H	405_Q	1.244	1.00
197_I	201_D	1.238	1.00
224_R	310_A	1.237	1.00
83_G	93_L	1.233	1.00
31_E	34_E	1.228	1.00
52_K	58_V	1.226	1.00
29_A	32_V	1.225	1.00
442_L	446_I	1.216	1.00
97_I	103_L	1.210	1.00
260_H	265_P	1.208	1.00
95_K	390_R	1.207	1.00
305_G	337_A	1.202	1.00
18_G	78_V	1.198	1.00
247_I	280_E	1.197	1.00
288_R	292_E	1.196	1.00
337_A	363_E	1.193	1.00
281_V	284_I	1.188	1.00
291_Q	294_E	1.186	1.00
96_R	99_T	1.185	1.00
10_Q	20_G	1.179	1.00
182_D	185_S	1.175	1.00
243_I	284_I	1.171	1.00
59_L	96_R	1.170	1.00
266_L	372_L	1.166	1.00
68_P	77_D	1.163	1.00
172_A	176_F	1.162	1.00
311_V	314_A	1.161	1.00
401_E	405_Q	1.161	1.00
235_A	359_A	1.156	1.00
31_E	35_T	1.144	1.00
57_S	92_L	1.142	1.00
127_E	391_R	1.141	1.00
32_V	97_I	1.140	1.00
404_Q	407_K	1.136	1.00
158_H	162_A	1.130	1.00
154_A	158_H	1.130	1.00
22_L	94_L	1.121	1.00
190_E	194_N	1.120	1.00
258_H	265_P	1.120	1.00
113_E	117_L	1.119	1.00
6_T	27_F	1.118	1.00
8_V	24_I	1.118	1.00
395_A	429_N	1.115	1.00
231_S	357_L	1.110	1.00
331_T	372_L	1.109	1.00
333_V	357_L	1.105	1.00
131_D	389_R	1.103	1.00
224_R	313_P	1.102	1.00
144_A	148_L	1.100	1.00
258_H	267_H	1.098	1.00
153_S	157_N	1.096	1.00
18_G	21_I	1.089	0.99
355_I	371_H	1.080	0.99
52_K	56_G	1.079	0.99
156_V	430_L	1.077	0.99
126_A	129_I	1.076	0.99
389_R	392_H	1.074	0.99
90_L	93_L	1.066	0.99
53_D	96_R	1.065	0.99
305_G	341_G	1.064	0.99
10_Q	94_L	1.063	0.99
171_E	424_R	1.058	0.99
137_S	140_A	1.056	0.99
171_E	178_D	1.056	0.99
390_R	393_L	1.050	0.99
96_R	101_P	1.049	0.99
36_V	97_I	1.042	0.99
431_S	437_F	1.039	0.99
260_H	263_G	1.035	0.99
387_L	396_L	1.033	0.99
405_Q	408_A	1.031	0.99
200_L	399_A	1.028	0.99
175_D	181_I	1.023	0.99
67_F	72_S	1.019	0.99
161_E	165_H	1.015	0.99
188_K	192_Q	1.014	0.99
81_L	93_L	1.013	0.99
357_L	360_R	1.005	0.99
92_L	138_E	1.003	0.99
277_A	280_E	1.003	0.99
371_H	375_S	1.002	0.99
211_S	239_R	0.999	0.99
86_G	90_L	0.998	0.99
53_D	99_T	0.997	0.99
284_I	288_R	0.997	0.99
236_L	369_R	0.995	0.99
62_G	65_L	0.989	0.99
398_Q	401_E	0.988	0.99
143_S	147_S	0.987	0.99
183_F	186_D	0.985	0.99
165_H	192_Q	0.983	0.99
104_R	110_E	0.975	0.99
185_S	188_K	0.974	0.99
159_L	196_V	0.970	0.99
373_K	377_G	0.963	0.99
50_P	61_Q	0.960	0.99
30_R	34_E	0.959	0.99
182_D	186_D	0.954	0.99
110_E	114_R	0.946	0.99
367_V	371_H	0.943	0.99
147_S	388_A	0.942	0.99
280_E	284_I	0.933	0.98
406_G	423_L	0.931	0.98
219_V	268_I	0.930	0.98
29_A	78_V	0.930	0.98
28_K	32_V	0.929	0.98
171_E	174_I	0.927	0.98
22_L	93_L	0.927	0.98
301_F	317_W	0.925	0.98
301_F	332_V	0.923	0.98
200_L	403_L	0.921	0.98
390_R	394_Q	0.921	0.98
255_L	289_A	0.919	0.98
256_R	292_E	0.917	0.98
11_A	19_V	0.917	0.98
191_A	194_N	0.916	0.98
237_A	257_E	0.912	0.98
188_K	191_A	0.912	0.98
366_D	369_R	0.907	0.98
333_V	368_L	0.905	0.98
194_N	197_I	0.905	0.98
221_I	233_L	0.904	0.98
373_K	378_F	0.901	0.98
232_L	302_M	0.899	0.98
175_D	178_D	0.896	0.98
167_R	427_Q	0.895	0.98
256_R	267_H	0.894	0.98
381_N	384_G	0.893	0.98
219_V	298_R	0.890	0.98
224_R	227_A	0.889	0.98
123_L	127_E	0.887	0.98
69_G	75_G	0.885	0.98
302_M	357_L	0.881	0.98
198_A	201_D	0.879	0.98
224_R	307_T	0.877	0.98
194_N	198_A	0.877	0.98
381_N	385_G	0.876	0.98
151_A	154_A	0.874	0.98
401_E	404_Q	0.872	0.98
165_H	449_S	0.871	0.98
148_L	152_F	0.868	0.98
157_N	161_E	0.866	0.97
405_Q	425_L	0.865	0.97
176_F	179_E	0.865	0.97
167_R	174_I	0.865	0.97
224_R	312_D	0.863	0.97
75_G	121_L	0.863	0.97
269_I	292_E	0.858	0.97
181_I	188_K	0.853	0.97
44_R	71_N	0.852	0.97
30_R	33_A	0.848	0.97
42_K	47_D	0.847	0.97
247_I	281_V	0.842	0.97
67_F	78_V	0.836	0.97
165_H	169_Y	0.835	0.97
48_Y	62_G	0.834	0.97
407_K	411_L	0.831	0.97
181_I	186_D	0.831	0.97
14_P	17_G	0.830	0.97
24_I	103_L	0.830	0.97
204_R	397_E	0.827	0.97
193_L	406_G	0.823	0.97
303_V	334_R	0.821	0.97
24_I	29_A	0.821	0.97
181_I	185_S	0.818	0.96
128_A	132_L	0.817	0.96
309_D	313_P	0.817	0.96
289_A	292_E	0.813	0.96
129_I	133_I	0.812	0.96
44_R	47_D	0.809	0.96
293_I	299_V	0.807	0.96
8_V	103_L	0.807	0.96
402_H	429_N	0.806	0.96
122_D	150_G	0.805	0.96
51_F	93_L	0.802	0.96
218_K	295_Q	0.798	0.96
34_E	40_L	0.795	0.96
109_G	116_F	0.795	0.96
397_E	401_E	0.793	0.96
62_G	83_G	0.791	0.96
169_Y	173_A	0.790	0.96
128_A	131_D	0.790	0.96
232_L	368_L	0.789	0.96
58_V	145_L	0.785	0.96
218_K	292_E	0.784	0.95
163_L	423_L	0.783	0.95
59_L	92_L	0.782	0.95
403_L	426_A	0.780	0.95
155_R	158_H	0.780	0.95
170_V	420_A	0.778	0.95
95_K	138_E	0.777	0.95
290_W	319_E	0.775	0.95
317_W	320_F	0.775	0.95
331_T	355_I	0.769	0.95
66_W	69_G	0.769	0.95
427_Q	431_S	0.768	0.95
49_L	64_A	0.768	0.95
33_A	41_P	0.765	0.95
36_V	51_F	0.765	0.95
34_E	41_P	0.763	0.95
421_E	425_L	0.763	0.95
221_I	289_A	0.763	0.95
116_F	123_L	0.762	0.95
37_L	51_F	0.760	0.95
303_V	343_T	0.760	0.95
404_Q	408_A	0.756	0.94
224_R	316_I	0.755	0.94
171_E	175_D	0.755	0.94
262_D	369_R	0.754	0.94
425_L	429_N	0.752	0.94
158_H	199_D	0.751	0.94
147_S	152_F	0.751	0.94
306_T	339_I	0.750	0.94
279_D	286_I	0.748	0.94
19_V	63_I	0.747	0.94
106_A	109_G	0.745	0.94
172_A	179_E	0.745	0.94
114_R	128_A	0.744	0.94
75_G	118_N	0.741	0.94
406_G	409_Q	0.739	0.94
174_I	179_E	0.737	0.94
81_L	97_I	0.737	0.94
112_S	116_F	0.735	0.94
400_A	407_K	0.734	0.94
387_L	393_L	0.734	0.94
299_V	328_L	0.732	0.93
11_A	78_V	0.732	0.93
51_F	64_A	0.730	0.93
451_C	454_K	0.729	0.93
222_A	299_V	0.729	0.93
220_V	269_I	0.728	0.93
34_E	39_K	0.728	0.93
10_Q	22_L	0.728	0.93
400_A	403_L	0.727	0.93
146_N	150_G	0.727	0.93
277_A	283_R	0.726	0.93
109_G	114_R	0.724	0.93
396_L	399_A	0.724	0.93
302_M	359_A	0.721	0.93
8_V	22_L	0.721	0.93
192_Q	195_D	0.717	0.93
431_S	435_G	0.716	0.93
110_E	115_A	0.715	0.93
233_L	241_A	0.714	0.93
437_F	441_D	0.714	0.93
119_D	123_L	0.713	0.93
170_V	175_D	0.713	0.93
38_G	41_P	0.710	0.92
64_A	81_L	0.710	0.92
146_N	151_A	0.707	0.92
11_A	18_G	0.707	0.92
428_Q	437_F	0.701	0.92
434_T	437_F	0.699	0.92
13_P	16_R	0.697	0.92
106_A	111_F	0.694	0.92
221_I	302_M	0.692	0.91
160_V	427_Q	0.690	0.91
147_S	392_H	0.688	0.91
170_V	174_I	0.688	0.91
137_S	144_A	0.687	0.91
139_Q	142_R	0.685	0.91
121_L	125_Q	0.684	0.91
357_L	365_V	0.684	0.91
299_V	330_I	0.680	0.91
59_L	93_L	0.677	0.91
137_S	265_P	0.676	0.90
427_Q	434_T	0.676	0.90
51_F	96_R	0.676	0.90
156_V	203_V	0.676	0.90
99_T	397_E	0.675	0.90
345_G	356_R	0.674	0.90
282_E	285_G	0.674	0.90
359_A	362_G	0.671	0.90
149_Q	154_A	0.670	0.90
233_L	255_L	0.669	0.90
341_G	344_L	0.669	0.90
213_L	265_P	0.667	0.90
418_L	422_E	0.667	0.90
128_A	147_S	0.667	0.90
157_N	160_V	0.666	0.90
127_E	131_D	0.665	0.90
313_P	317_W	0.664	0.90
405_Q	409_Q	0.664	0.90
191_A	195_D	0.663	0.90
320_F	323_R	0.663	0.90
165_H	445_R	0.661	0.90
218_K	269_I	0.661	0.90
39_K	47_D	0.660	0.89
119_D	127_E	0.660	0.89
392_H	433_I	0.660	0.89
191_A	198_A	0.660	0.89
313_P	316_I	0.659	0.89
259_I	268_I	0.659	0.89
314_A	319_E	0.659	0.89
140_A	143_S	0.658	0.89
52_K	55_D	0.658	0.89
63_I	82_Q	0.657	0.89
275_R	285_G	0.657	0.89
172_A	452_I	0.657	0.89
288_R	291_Q	0.653	0.89
360_R	363_E	0.652	0.89
384_G	388_A	0.652	0.89
418_L	421_E	0.651	0.89
44_R	68_P	0.651	0.89
6_T	103_L	0.651	0.89
395_A	399_A	0.651	0.89
236_L	365_V	0.649	0.89
300_L	368_L	0.648	0.89
450_F	453_G	0.647	0.88
132_L	145_L	0.647	0.88
167_R	420_A	0.646	0.88
18_G	24_I	0.645	0.88
367_V	370_N	0.644	0.88
168_I	172_A	0.644	0.88
382_M	385_G	0.643	0.88
162_A	196_V	0.642	0.88
388_A	393_L	0.640	0.88
109_G	123_L	0.639	0.88
104_R	108_P	0.638	0.88
111_F	115_A	0.638	0.88
125_Q	128_A	0.638	0.88
386_F	389_R	0.636	0.88
242_A	255_L	0.636	0.88
383_E	388_A	0.634	0.87
86_G	93_L	0.633	0.87
81_L	85_G	0.633	0.87
106_A	110_E	0.633	0.87
5_D	27_F	0.630	0.87
355_I	368_L	0.629	0.87
88_V	92_L	0.628	0.87
202_A	366_D	0.627	0.87
440_D	444_G	0.625	0.87
388_A	392_H	0.625	0.87
238_G	362_G	0.625	0.87
110_E	126_A	0.625	0.87
41_P	45_Y	0.624	0.87
222_A	301_F	0.623	0.87
44_R	48_Y	0.623	0.87
124_A	127_E	0.623	0.87
184_L	188_K	0.622	0.86
24_I	79_L	0.621	0.86
169_Y	172_A	0.621	0.86
278_S	283_R	0.620	0.86
111_F	114_R	0.620	0.86
30_R	79_L	0.619	0.86
385_G	388_A	0.618	0.86
231_S	235_A	0.618	0.86
204_R	400_A	0.617	0.86
432_E	438_T	0.617	0.86
274_L	290_W	0.616	0.86
111_F	118_N	0.616	0.86
171_E	177_P	0.615	0.86
186_D	189_I	0.612	0.86
427_Q	442_L	0.611	0.86
220_V	292_E	0.610	0.85
158_H	161_E	0.610	0.85
301_F	330_I	0.610	0.85
308_T	342_E	0.607	0.85
365_V	369_R	0.607	0.85
281_V	288_R	0.606	0.85
28_K	35_T	0.605	0.85
339_I	361_T	0.605	0.85
395_A	398_Q	0.605	0.85
133_I	137_S	0.604	0.85
12_T	15_G	0.602	0.85
122_D	126_A	0.600	0.84
44_R	66_W	0.600	0.84
137_S	141_A	0.599	0.84
364_G	368_L	0.599	0.84
114_R	123_L	0.597	0.84
421_E	427_Q	0.596	0.84
24_I	32_V	0.595	0.84
86_G	89_I	0.595	0.84
72_S	76_E	0.595	0.84
168_I	178_D	0.595	0.84
38_G	50_P	0.595	0.84
154_A	157_N	0.594	0.84
173_A	183_F	0.592	0.84
382_M	386_F	0.590	0.83
261_I	369_R	0.588	0.83
41_P	44_R	0.587	0.83
25_S	76_E	0.586	0.83
46_A	82_Q	0.586	0.83
163_L	426_A	0.586	0.83
160_V	436_E	0.586	0.83
109_G	115_A	0.585	0.83
240_E	288_R	0.584	0.83
30_R	40_L	0.582	0.83
167_R	171_E	0.582	0.83
220_V	289_A	0.582	0.83
109_G	122_D	0.581	0.83
237_A	259_I	0.581	0.83
58_V	61_Q	0.580	0.82
11_A	72_S	0.579	0.82
46_A	49_L	0.577	0.82
409_Q	419_L	0.577	0.82
169_Y	174_I	0.576	0.82
379_D	382_M	0.576	0.82
227_A	274_L	0.575	0.82
443_L	452_I	0.573	0.82
450_F	454_K	0.572	0.82
173_A	177_P	0.572	0.82
39_K	49_L	0.572	0.82
50_P	149_Q	0.572	0.82
167_R	423_L	0.570	0.81
421_E	424_R	0.570	0.81
19_V	82_Q	0.570	0.81
332_V	354_L	0.568	0.81
431_S	434_T	0.568	0.81
16_R	136_S	0.568	0.81
44_R	65_L	0.566	0.81
152_F	155_R	0.566	0.81
196_V	203_V	0.565	0.81
438_T	443_L	0.564	0.81
121_L	126_A	0.564	0.81
362_G	365_V	0.563	0.81
424_R	452_I	0.563	0.81
289_A	293_I	0.563	0.81
241_A	254_V	0.562	0.80
193_L	197_I	0.561	0.80
124_A	128_A	0.561	0.80
176_F	443_L	0.559	0.80
37_L	64_A	0.559	0.80
385_G	389_R	0.558	0.80
66_W	79_L	0.557	0.80
356_R	367_V	0.557	0.80
204_R	393_L	0.556	0.80
363_E	367_V	0.554	0.80
30_R	41_P	0.554	0.80
40_L	49_L	0.553	0.79
85_G	109_G	0.551	0.79
92_L	141_A	0.550	0.79
353_A	375_S	0.549	0.79
172_A	177_P	0.549	0.79
172_A	181_I	0.549	0.79
409_Q	414_W	0.549	0.79
111_F	127_E	0.548	0.79
61_Q	120_K	0.547	0.79
38_G	56_G	0.547	0.79
344_L	356_R	0.546	0.79
275_R	282_E	0.545	0.78
352_H	371_H	0.544	0.78
115_A	120_K	0.544	0.78
170_V	178_D	0.543	0.78
126_A	130_A	0.542	0.78
109_G	117_L	0.542	0.78
115_A	118_N	0.542	0.78
415_A	418_L	0.541	0.78
152_F	156_V	0.541	0.78
124_A	129_I	0.540	0.78
256_R	269_I	0.539	0.78
340_T	344_L	0.539	0.78
76_E	118_N	0.538	0.78
160_V	431_S	0.537	0.77
206_E	209_Q	0.535	0.77
392_H	431_S	0.535	0.77
340_T	345_G	0.535	0.77
106_A	123_L	0.535	0.77
173_A	176_F	0.535	0.77
61_Q	64_A	0.534	0.77
306_T	340_T	0.534	0.77
294_E	328_L	0.534	0.77
98_L	103_L	0.534	0.77
266_L	376_M	0.533	0.77
116_F	122_D	0.533	0.77
201_D	204_R	0.533	0.77
138_E	142_R	0.531	0.77
36_V	39_K	0.530	0.76
180_E	185_S	0.530	0.76
127_E	135_A	0.530	0.76
171_E	176_F	0.528	0.76
104_R	111_F	0.528	0.76
218_K	297_D	0.528	0.76
109_G	118_N	0.528	0.76
64_A	79_L	0.528	0.76
323_R	327_K	0.528	0.76
207_A	393_L	0.527	0.76
150_G	176_F	0.526	0.76
77_D	80_E	0.525	0.76
85_G	89_I	0.524	0.76
245_T	280_E	0.524	0.76
12_T	17_G	0.523	0.76
286_I	290_W	0.523	0.76
132_L	150_G	0.523	0.76
370_N	373_K	0.521	0.75
200_L	400_A	0.520	0.75
84_H	89_I	0.517	0.75
319_E	448_S	0.517	0.75
366_D	370_N	0.517	0.75
110_E	244_V	0.516	0.75
408_A	411_L	0.516	0.75
122_D	153_S	0.516	0.75
95_K	99_T	0.515	0.74
67_F	75_G	0.515	0.74
224_R	303_V	0.515	0.74
76_E	84_H	0.513	0.74
380_T	384_G	0.513	0.74
16_R	87_P	0.512	0.74
261_I	264_M	0.512	0.74
91_D	95_K	0.512	0.74
131_D	392_H	0.511	0.74
211_S	393_L	0.510	0.74
431_S	442_L	0.510	0.74
143_S	388_A	0.509	0.74
165_H	168_I	0.509	0.74
255_L	267_H	0.508	0.73
61_Q	145_L	0.508	0.73
236_L	259_I	0.506	0.73
432_E	435_G	0.506	0.73
118_N	122_D	0.505	0.73
171_E	446_I	0.505	0.73
12_T	16_R	0.503	0.73
304_D	335_N	0.503	0.73
182_D	187_G	0.503	0.73
104_R	114_R	0.501	0.72
227_A	289_A	0.500	0.72
13_P	18_G	0.500	0.72

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1xzpA	4	0.978	100	0.172	Contact Map
3geeA	2	0.9075	100	0.175	Contact Map
3gehA	2	0.9405	100	0.176	Contact Map
2qtfA	1	0.6322	100	0.72	Contact Map
3j65o	1	0.7026	100	0.722	Contact Map
4kjzA	1	0.6057	100	0.727	Contact Map
3j4jA	1	0.6101	100	0.728	Contact Map
4b43A	1	0.5903	100	0.735	Contact Map
2e87A	1	0.7225	100	0.743	Contact Map
2qm8A	2	0.5661	100	0.743	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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