HFLX - ECOLI - GREMLIN Contacts

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HFLX - GTPase HflX

UniProt:	P25519	Sequences: MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10437
Length:	426 (387)
Sequences:	3434 (1921)
Seq/√Len:	97.6

ECOLI - HFLX
BACSU - HFLX
HALSA - Q9HMC2
SULSO - HFLX

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
63_A	95_L	4.020	1.00
70_V	98_C	3.668	1.00
130_R	175_Q	3.634	1.00
34_V	79_L	3.613	1.00
58_V	66_I	3.594	1.00
281_L	315_V	3.271	1.00
63_A	92_L	3.247	1.00
49_R	53_H	2.860	1.00
236_L	248_V	2.846	1.00
31_E	44_V	2.833	1.00
201_S	277_A	2.802	1.00
28_Q	44_V	2.761	1.00
284_I	314_L	2.713	1.00
238_R	246_E	2.693	1.00
62_K	65_E	2.670	1.00
125_E	170_R	2.573	1.00
243_D	358_T	2.568	1.00
32_S	35_S	2.545	1.00
78_V	96_C	2.480	1.00
45_I	66_I	2.398	1.00
70_V	78_V	2.352	1.00
34_V	39_V	2.334	1.00
82_H	258_H	2.324	1.00
216_R	350_I	2.292	1.00
356_A	359_E	2.290	1.00
43_Q	69_A	2.253	1.00
67_A	71_K	2.246	1.00
200_V	247_T	2.213	1.00
17_Y	48_S	2.207	1.00
12_V	75_A	2.191	1.00
299_N	312_T	2.160	1.00
236_L	250_A	2.143	1.00
122_L	174_I	2.134	1.00
36_S	114_R	2.110	1.00
45_I	69_A	2.066	1.00
14_V	58_V	2.048	1.00
295_I	314_L	2.002	1.00
11_A	39_V	1.994	1.00
212_T	344_A	1.991	1.00
315_V	353_L	1.988	1.00
92_L	96_C	1.988	1.00
288_D	294_N	1.981	1.00
265_A	268_K	1.971	1.00
14_V	80_F	1.940	1.00
281_L	353_L	1.892	1.00
382_R	386_L	1.884	1.00
313_L	356_A	1.876	1.00
109_D	128_Q	1.866	1.00
203_V	280_L	1.863	1.00
303_E	308_H	1.830	1.00
223_Y	227_Q	1.825	1.00
261_H	301_V	1.800	1.00
162_T	166_L	1.789	1.00
173_Q	177_R	1.777	1.00
356_A	360_R	1.757	1.00
179_E	182_E	1.739	1.00
11_A	77_V	1.730	1.00
78_V	98_C	1.715	1.00
140_W	159_Q	1.715	1.00
279_L	357_L	1.714	1.00
315_V	340_V	1.710	1.00
182_E	272_Q	1.703	1.00
384_Y	392_E	1.697	1.00
290_R	293_E	1.692	1.00
193_I	276_Q	1.675	1.00
319_I	341_W	1.670	1.00
67_A	95_L	1.663	1.00
119_E	185_R	1.646	1.00
140_W	144_E	1.643	1.00
36_S	227_Q	1.640	1.00
296_E	300_T	1.624	1.00
284_I	295_I	1.620	1.00
58_V	80_F	1.619	1.00
211_S	222_V	1.599	1.00
146_Q	152_L	1.596	1.00
125_E	129_L	1.593	1.00
171_I	175_Q	1.580	1.00
300_T	304_E	1.571	1.00
140_W	143_L	1.567	1.00
70_V	96_C	1.566	1.00
371_R	398_G	1.565	1.00
182_E	268_K	1.565	1.00
287_A	321_M	1.565	1.00
215_N	224_A	1.553	1.00
286_A	316_M	1.550	1.00
216_R	347_G	1.539	1.00
8_G	40_E	1.526	1.00
185_R	272_Q	1.521	1.00
15_H	27_L	1.507	1.00
222_V	235_T	1.488	1.00
313_L	360_R	1.486	1.00
12_V	69_A	1.475	1.00
118_H	177_R	1.469	1.00
57_F	82_H	1.468	1.00
282_H	298_V	1.453	1.00
275_R	306_D	1.449	1.00
380_R	392_E	1.444	1.00
142_H	159_Q	1.438	1.00
9_E	99_R	1.437	1.00
346_T	349_G	1.433	1.00
126_L	171_I	1.418	1.00
63_A	96_C	1.399	0.99
316_M	341_W	1.398	0.99
323_E	326_E	1.387	0.99
64_V	68_E	1.387	0.99
34_V	106_L	1.374	0.99
53_H	60_E	1.368	0.99
23_D	46_T	1.367	0.99
239_I	249_L	1.366	0.99
184_Q	187_Q	1.363	0.99
223_Y	230_A	1.352	0.99
172_V	176_S	1.351	0.99
218_T	239_I	1.346	0.99
189_R	272_Q	1.344	0.99
299_N	314_L	1.336	0.99
182_E	269_A	1.324	0.99
212_T	342_L	1.319	0.99
12_V	43_Q	1.317	0.99
140_W	147_K	1.302	0.99
28_Q	31_E	1.300	0.99
262_D	304_E	1.285	0.99
240_D	246_E	1.284	0.99
56_Y	63_A	1.283	0.99
200_V	281_L	1.275	0.99
203_V	302_L	1.269	0.99
64_V	95_L	1.266	0.99
138_R	147_K	1.266	0.99
286_A	291_V	1.263	0.99
147_K	152_L	1.259	0.99
30_F	79_L	1.257	0.99
373_P	376_E	1.255	0.99
69_A	73_T	1.254	0.99
349_G	352_Q	1.253	0.99
295_I	299_N	1.248	0.99
10_Q	40_E	1.247	0.99
199_T	248_V	1.243	0.99
39_V	76_S	1.234	0.99
291_V	316_M	1.224	0.99
42_L	73_T	1.213	0.99
122_L	181_V	1.213	0.99
36_S	256_I	1.209	0.98
133_A	168_R	1.195	0.98
338_N	356_A	1.184	0.98
37_A	109_D	1.184	0.98
279_L	313_L	1.183	0.98
241_V	247_T	1.183	0.98
187_Q	190_Q	1.164	0.98
70_V	75_A	1.163	0.98
239_I	247_T	1.161	0.98
43_Q	75_A	1.159	0.98
374_P	398_G	1.158	0.98
288_D	291_V	1.153	0.98
15_H	26_D	1.150	0.98
114_R	223_Y	1.147	0.98
200_V	279_L	1.139	0.98
307_A	310_I	1.137	0.98
315_V	342_L	1.136	0.98
355_Q	359_E	1.136	0.98
39_V	79_L	1.135	0.98
58_V	63_A	1.133	0.98
261_H	264_V	1.128	0.98
138_R	142_H	1.122	0.98
39_V	109_D	1.118	0.97
138_R	141_T	1.115	0.97
226_D	321_M	1.113	0.97
68_E	71_K	1.107	0.97
130_R	262_D	1.105	0.97
282_H	295_I	1.102	0.97
202_L	214_F	1.098	0.97
9_E	39_V	1.092	0.97
284_I	291_V	1.091	0.97
128_Q	155_P	1.091	0.97
42_L	75_A	1.087	0.97
43_Q	73_T	1.076	0.97
36_S	228_L	1.072	0.97
184_Q	188_G	1.072	0.97
376_E	379_L	1.071	0.97
68_E	72_A	1.069	0.97
128_Q	132_L	1.060	0.96
13_L	30_F	1.054	0.96
146_Q	159_Q	1.053	0.96
14_V	66_I	1.048	0.96
144_E	152_L	1.048	0.96
77_V	99_R	1.043	0.96
313_L	357_L	1.041	0.96
182_E	265_A	1.039	0.96
295_I	316_M	1.037	0.96
367_Q	390_E	1.033	0.96
395_E	398_G	1.028	0.96
120_G	155_P	1.026	0.96
128_Q	160_L	1.021	0.96
119_E	181_V	1.018	0.96
34_V	41_A	1.016	0.96
207_N	226_D	1.015	0.96
157_E	165_R	1.011	0.95
112_A	155_P	1.010	0.95
381_S	385_Q	1.005	0.95
138_R	152_L	1.005	0.95
353_L	357_L	1.005	0.95
16_I	47_G	1.004	0.95
10_Q	74_G	1.003	0.95
292_Q	296_E	1.002	0.95
372_L	379_L	0.999	0.95
297_A	301_V	0.999	0.95
67_A	97_E	0.994	0.95
91_N	94_R	0.993	0.95
130_R	171_I	0.990	0.95
129_L	167_L	0.988	0.95
144_E	147_K	0.986	0.95
242_A	358_T	0.981	0.95
69_A	75_A	0.978	0.95
109_D	153_R	0.978	0.95
282_H	312_T	0.971	0.94
180_R	183_K	0.968	0.94
150_I	155_P	0.968	0.94
52_P	57_F	0.964	0.94
31_E	35_S	0.960	0.94
152_L	162_T	0.959	0.94
39_V	77_V	0.956	0.94
16_I	52_P	0.955	0.94
71_K	97_E	0.954	0.94
147_K	150_I	0.950	0.94
39_V	150_I	0.950	0.94
66_I	96_C	0.948	0.94
190_Q	194_K	0.948	0.94
152_L	155_P	0.945	0.93
139_G	142_H	0.942	0.93
24_M	28_Q	0.941	0.93
282_H	288_D	0.939	0.93
112_A	128_Q	0.937	0.93
153_R	160_L	0.931	0.93
352_Q	355_Q	0.931	0.93
176_S	179_E	0.930	0.93
191_S	194_K	0.926	0.93
81_D	258_H	0.920	0.93
342_L	350_I	0.919	0.92
371_R	395_E	0.918	0.92
293_E	296_E	0.918	0.92
287_A	322_L	0.914	0.92
140_W	166_L	0.913	0.92
227_Q	230_A	0.912	0.92
159_Q	166_L	0.912	0.92
301_V	305_I	0.911	0.92
11_A	79_L	0.905	0.92
291_V	295_I	0.905	0.92
144_E	159_Q	0.903	0.92
120_G	234_P	0.902	0.92
225_A	230_A	0.902	0.92
197_V	248_V	0.901	0.92
172_V	175_Q	0.898	0.92
94_R	97_E	0.897	0.92
146_Q	158_T	0.894	0.91
26_D	258_H	0.887	0.91
372_L	376_E	0.885	0.91
360_R	363_G	0.881	0.91
325_F	328_R	0.871	0.90
38_G	113_Q	0.868	0.90
268_K	304_E	0.866	0.90
161_E	165_R	0.862	0.90
183_K	187_Q	0.861	0.90
36_S	109_D	0.860	0.90
83_A	262_D	0.857	0.90
37_A	112_A	0.857	0.90
374_P	394_M	0.854	0.89
387_Q	392_E	0.851	0.89
214_F	249_L	0.851	0.89
203_V	274_T	0.849	0.89
274_T	277_A	0.838	0.89
340_V	356_A	0.838	0.89
12_V	66_I	0.832	0.88
13_L	31_E	0.831	0.88
338_N	360_R	0.831	0.88
144_E	150_I	0.830	0.88
142_H	166_L	0.828	0.88
138_R	159_Q	0.827	0.88
347_G	350_I	0.826	0.88
214_F	297_A	0.825	0.88
314_L	339_R	0.821	0.87
39_V	128_Q	0.820	0.87
109_D	112_A	0.817	0.87
146_Q	153_R	0.816	0.87
136_L	160_L	0.815	0.87
146_Q	150_I	0.815	0.87
37_A	128_Q	0.815	0.87
217_I	354_F	0.815	0.87
374_P	395_E	0.813	0.87
36_S	223_Y	0.813	0.87
185_R	266_A	0.812	0.87
67_A	96_C	0.812	0.87
143_L	163_D	0.809	0.87
60_E	64_V	0.809	0.87
274_T	280_L	0.805	0.86
371_R	374_P	0.805	0.86
24_M	44_V	0.803	0.86
326_E	329_I	0.803	0.86
142_H	145_R	0.800	0.86
370_L	379_L	0.800	0.86
79_L	106_L	0.799	0.86
383_F	387_Q	0.796	0.86
234_P	249_L	0.795	0.86
99_R	128_Q	0.792	0.86
120_G	266_A	0.786	0.85
239_I	357_L	0.784	0.85
15_H	23_D	0.780	0.85
300_T	303_E	0.779	0.85
245_G	362_S	0.778	0.85
178_L	181_V	0.776	0.84
36_S	225_A	0.775	0.84
99_R	109_D	0.774	0.84
186_E	193_I	0.773	0.84
200_V	357_L	0.771	0.84
244_V	358_T	0.769	0.84
47_G	62_K	0.767	0.84
138_R	163_D	0.767	0.84
202_L	213_L	0.761	0.83
321_M	345_Q	0.761	0.83
32_S	257_R	0.760	0.83
45_I	75_A	0.758	0.83
384_Y	389_I	0.756	0.83
144_E	153_R	0.756	0.83
324_D	327_P	0.755	0.83
27_L	30_F	0.755	0.83
35_S	41_A	0.754	0.83
169_N	173_Q	0.753	0.83
101_I	106_L	0.753	0.83
169_N	172_V	0.753	0.83
56_Y	60_E	0.752	0.82
137_V	140_W	0.750	0.82
25_E	290_R	0.749	0.82
189_R	273_E	0.745	0.82
140_W	145_R	0.743	0.82
166_L	169_N	0.743	0.82
117_T	120_G	0.741	0.82
198_P	361_L	0.739	0.81
296_E	299_N	0.737	0.81
144_E	166_L	0.731	0.81
10_Q	42_L	0.727	0.80
39_V	99_R	0.723	0.80
25_E	288_D	0.721	0.80
89_E	105_G	0.720	0.80
351_P	355_Q	0.714	0.79
211_S	224_A	0.714	0.79
31_E	41_A	0.713	0.79
167_L	171_I	0.713	0.79
301_V	304_E	0.711	0.79
177_R	265_A	0.710	0.79
242_A	354_F	0.709	0.79
245_G	358_T	0.709	0.79
138_R	143_L	0.707	0.78
15_H	258_H	0.704	0.78
119_E	266_A	0.701	0.78
27_L	44_V	0.696	0.77
32_S	36_S	0.695	0.77
355_Q	358_T	0.694	0.77
57_F	80_F	0.691	0.77
140_W	155_P	0.691	0.77
136_L	164_R	0.690	0.77
64_V	67_A	0.686	0.76
202_L	283_V	0.686	0.76
208_A	266_A	0.685	0.76
74_G	180_R	0.684	0.76
141_T	144_E	0.678	0.76
218_T	221_R	0.677	0.75
323_E	328_R	0.676	0.75
94_R	98_C	0.675	0.75
159_Q	163_D	0.672	0.75
36_S	202_L	0.670	0.75
142_H	146_Q	0.668	0.74
286_A	322_L	0.667	0.74
143_L	159_Q	0.666	0.74
56_Y	95_L	0.663	0.74
191_S	195_A	0.663	0.74
12_V	45_I	0.662	0.74
47_G	59_G	0.662	0.74
37_A	113_Q	0.661	0.74
13_L	44_V	0.659	0.73
327_P	348_A	0.658	0.73
284_I	316_M	0.658	0.73
99_R	187_Q	0.658	0.73
372_L	377_G	0.654	0.73
322_L	327_P	0.654	0.73
144_E	148_G	0.653	0.73
151_G	155_P	0.650	0.72
188_G	265_A	0.649	0.72
93_E	99_R	0.648	0.72
148_G	152_L	0.648	0.72
132_L	139_G	0.646	0.72
316_M	339_R	0.646	0.72
28_Q	321_M	0.644	0.72
90_R	93_E	0.642	0.71
67_A	70_V	0.641	0.71
12_V	70_V	0.641	0.71
9_E	128_Q	0.639	0.71
384_Y	394_M	0.639	0.71
297_A	300_T	0.639	0.71
40_E	44_V	0.638	0.71
384_Y	387_Q	0.638	0.71
370_L	383_F	0.634	0.71
9_E	76_S	0.632	0.70
200_V	360_R	0.632	0.70
207_N	225_A	0.629	0.70
126_L	174_I	0.629	0.70
140_W	152_L	0.628	0.70
245_G	365_V	0.627	0.70
159_Q	215_N	0.625	0.69
26_D	257_R	0.625	0.69
316_M	336_K	0.625	0.69
128_Q	150_I	0.625	0.69
158_T	162_T	0.622	0.69
371_R	397_D	0.621	0.69
342_L	348_A	0.617	0.68
112_A	153_R	0.615	0.68
36_S	257_R	0.615	0.68
32_S	226_D	0.613	0.68
84_L	277_A	0.613	0.68
176_S	348_A	0.612	0.68
235_T	384_Y	0.609	0.67
247_T	357_L	0.609	0.67
154_G	161_E	0.609	0.67
245_G	361_L	0.608	0.67
99_R	155_P	0.608	0.67
277_A	307_A	0.608	0.67
101_I	105_G	0.606	0.67
216_R	345_Q	0.606	0.67
283_V	342_L	0.606	0.67
175_Q	265_A	0.605	0.67
233_D	298_V	0.604	0.67
119_E	272_Q	0.604	0.67
233_D	263_L	0.604	0.67
279_L	360_R	0.602	0.67
160_L	163_D	0.601	0.66
154_G	157_E	0.601	0.66
299_N	303_E	0.598	0.66
26_D	30_F	0.597	0.66
157_E	161_E	0.596	0.66
175_Q	179_E	0.595	0.66
66_I	70_V	0.592	0.65
137_V	148_G	0.591	0.65
67_A	98_C	0.591	0.65
144_E	155_P	0.591	0.65
392_E	398_G	0.590	0.65
105_G	134_T	0.589	0.65
40_E	74_G	0.589	0.65
380_R	384_Y	0.587	0.65
145_R	272_Q	0.587	0.65
377_G	383_F	0.587	0.65
261_H	304_E	0.586	0.65
117_T	121_K	0.586	0.65
219_E	378_R	0.586	0.65
214_F	222_V	0.582	0.64
275_R	310_I	0.582	0.64
27_L	46_T	0.581	0.64
59_G	84_L	0.580	0.64
179_E	183_K	0.579	0.64
284_I	299_N	0.576	0.63
57_F	85_S	0.576	0.63
30_F	80_F	0.575	0.63
211_S	249_L	0.575	0.63
221_R	225_A	0.575	0.63
137_V	164_R	0.575	0.63
15_H	18_F	0.574	0.63
17_Y	23_D	0.571	0.63
315_V	350_I	0.571	0.63
128_Q	162_T	0.570	0.62
377_G	380_R	0.570	0.62
342_L	346_T	0.570	0.62
156_G	165_R	0.569	0.62
37_A	150_I	0.568	0.62
377_G	381_S	0.568	0.62
199_T	276_Q	0.568	0.62
140_W	163_D	0.567	0.62
28_Q	194_K	0.567	0.62
214_F	224_A	0.567	0.62
390_E	393_W	0.566	0.62
59_G	62_K	0.566	0.62
76_S	269_A	0.565	0.62
45_I	73_T	0.564	0.62
389_I	392_E	0.564	0.62
213_L	342_L	0.563	0.61
327_P	341_W	0.563	0.61
134_T	214_F	0.563	0.61
272_Q	276_Q	0.563	0.61
22_K	293_E	0.561	0.61
186_E	363_G	0.561	0.61
132_L	160_L	0.560	0.61
89_E	142_H	0.558	0.61
224_A	227_Q	0.557	0.61
83_A	104_T	0.556	0.61
66_I	113_Q	0.556	0.61
120_G	215_N	0.556	0.61
346_T	351_P	0.556	0.61
309_E	396_E	0.555	0.60
216_R	224_A	0.555	0.60
105_G	160_L	0.554	0.60
194_K	363_G	0.553	0.60
214_F	250_A	0.552	0.60
50_K	300_T	0.551	0.60
178_L	265_A	0.551	0.60
295_I	298_V	0.550	0.60
239_I	354_F	0.549	0.60
10_Q	76_S	0.547	0.59
378_R	385_Q	0.546	0.59
306_D	310_I	0.546	0.59
138_R	144_E	0.545	0.59
374_P	377_G	0.545	0.59
94_R	321_M	0.543	0.59
142_H	152_L	0.543	0.59
214_F	236_L	0.542	0.59
351_P	354_F	0.541	0.58
241_V	244_V	0.541	0.58
350_I	354_F	0.541	0.58
136_L	165_R	0.540	0.58
180_R	184_Q	0.540	0.58
276_Q	345_Q	0.539	0.58
79_L	162_T	0.538	0.58
108_L	215_N	0.537	0.58
71_K	98_C	0.537	0.58
15_H	81_D	0.537	0.58
324_D	328_R	0.537	0.58
220_A	234_P	0.535	0.58
224_A	269_A	0.534	0.57
230_A	263_L	0.533	0.57
302_L	307_A	0.533	0.57
159_Q	177_R	0.533	0.57
30_F	41_A	0.532	0.57
336_K	339_R	0.531	0.57
133_A	171_I	0.530	0.57
382_R	385_Q	0.530	0.57
172_V	180_R	0.529	0.57
32_S	265_A	0.529	0.57
29_E	33_L	0.529	0.57
80_F	84_L	0.528	0.57
371_R	393_W	0.527	0.56
126_L	298_V	0.527	0.56
179_E	359_E	0.527	0.56
23_D	81_D	0.526	0.56
370_L	394_M	0.525	0.56
77_V	158_T	0.525	0.56
285_D	318_K	0.525	0.56
110_I	178_L	0.525	0.56
26_D	32_S	0.524	0.56
153_R	162_T	0.522	0.56
185_R	234_P	0.521	0.56
42_L	76_S	0.521	0.56
128_Q	153_R	0.521	0.56
10_Q	75_A	0.521	0.56
315_V	357_L	0.521	0.56
15_H	82_H	0.520	0.55
380_R	389_I	0.520	0.55
286_A	319_I	0.519	0.55
145_R	148_G	0.519	0.55
391_K	395_E	0.518	0.55
129_L	171_I	0.518	0.55
105_G	158_T	0.518	0.55
199_T	305_I	0.517	0.55
176_S	180_R	0.516	0.55
101_I	109_D	0.516	0.55
375_Q	382_R	0.515	0.55
184_Q	224_A	0.514	0.55
322_L	326_E	0.513	0.54
101_I	112_A	0.512	0.54
176_S	300_T	0.512	0.54
202_L	222_V	0.512	0.54
160_L	164_R	0.511	0.54
13_L	16_I	0.509	0.54
378_R	381_S	0.508	0.54
203_V	307_A	0.508	0.54
116_R	233_D	0.508	0.54
225_A	228_L	0.508	0.54
345_Q	391_K	0.507	0.54
266_A	396_E	0.507	0.54
105_G	139_G	0.506	0.53
146_Q	155_P	0.505	0.53
354_F	358_T	0.504	0.53
346_T	359_E	0.503	0.53
107_I	157_E	0.503	0.53
140_W	160_L	0.503	0.53
57_F	188_G	0.501	0.53
85_S	88_Q	0.501	0.53
379_L	386_L	0.500	0.53

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2qtfA	1	0.7042	100	0.369	Contact Map
3geeA	2	0.8192	100	0.711	Contact Map
3j65o	1	0.7441	100	0.711	Contact Map
1xzpA	4	0.892	100	0.725	Contact Map
3gehA	2	0.8521	100	0.744	Contact Map
2e87A	1	0.7958	100	0.762	Contact Map
3j4jA	1	0.6549	100	0.779	Contact Map
4kjzA	1	0.6667	100	0.788	Contact Map
2qm8A	2	0.5939	100	0.789	Contact Map
4xc8A	2	0.9202	100	0.79	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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