GREMLIN Database
CYDC - ATP-binding/permease protein CydC
UniProt: P23886 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10012
Length: 573 (554)
Sequences: 52318 (37195)
Seq/√Len: 1580.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
343_D358_G4.5431.00
367_E541_Q4.4521.00
456_E464_L4.4121.00
340_T362_Q4.3411.00
364_N367_E4.2841.00
342_R396_E3.9941.00
428_A432_D3.9881.00
541_Q553_Q3.7981.00
431_R443_D3.7461.00
556_H566_Y3.6951.00
451_R456_E3.6521.00
396_E403_P3.4001.00
456_E460_E3.3901.00
342_R398_L3.3711.00
338_S362_Q3.2711.00
341_L344_V3.2051.00
357_K549_Q3.1541.00
442_S445_A3.0241.00
563_Q567_Y3.0031.00
431_R465_N2.9691.00
431_R435_L2.9511.00
383_L529_V2.9061.00
345_Q358_G2.8461.00
443_D447_S2.7901.00
450_L464_L2.7511.00
354_Q357_K2.7191.00
383_L497_L2.7191.00
415_T494_P2.5591.00
434_L450_L2.5011.00
340_T398_L2.4891.00
448_E452_R2.4721.00
552_E562_R2.4551.00
363_V369_I2.4321.00
338_S364_N2.4311.00
462_A466_S2.4111.00
388_R391_D2.3941.00
438_S445_A2.3841.00
447_S456_E2.3801.00
417_S493_A2.3771.00
153_I157_F2.3651.00
492_D524_K2.3321.00
552_E564_G2.3021.00
347_T354_Q2.2911.00
543_I553_Q2.2821.00
44_S277_G2.2811.00
361_L543_I2.2801.00
555_T558_E2.2741.00
408_N411_A2.2601.00
447_S451_R2.2211.00
345_Q354_Q2.1921.00
431_R446_L2.1661.00
338_S365_A2.1611.00
44_S275_Q2.1421.00
434_L446_L2.1391.00
368_H539_F2.1191.00
552_E563_Q2.1131.00
341_L361_L2.1061.00
345_Q394_Q2.0781.00
10_L98_Y2.0741.00
337_V400_N2.0441.00
343_D360_S2.0011.00
518_A538_R1.9891.00
455_L458_L1.9751.00
363_V527_L1.9621.00
391_D405_A1.9501.00
315_S319_D1.9311.00
14_H94_H1.9221.00
347_T393_Q1.9171.00
546_D565_R1.9091.00
510_E532_R1.9011.00
447_S460_E1.8991.00
445_A492_D1.8971.00
369_I541_Q1.8591.00
448_E451_R1.8521.00
554_G558_E1.8431.00
12_K15_K1.8251.00
102_K322_P1.8211.00
435_L446_L1.8021.00
449_I453_V1.7941.00
60_M64_A1.7721.00
159_D269_G1.7691.00
195_L232_Q1.7631.00
435_L443_D1.7571.00
511_S515_E1.7201.00
369_I543_I1.7201.00
64_A68_G1.7001.00
382_L545_M1.6831.00
505_L513_I1.6781.00
339_L527_L1.6611.00
450_L459_L1.6521.00
543_I550_I1.6481.00
403_P406_S1.6471.00
336_R400_N1.6391.00
190_Q312_V1.6301.00
457_K460_E1.6251.00
356_L359_I1.6181.00
126_D313_R1.6171.00
552_E567_Y1.6121.00
370_A539_F1.6111.00
371_I382_L1.6101.00
443_D465_N1.6081.00
434_L490_L1.6011.00
218_A221_R1.5851.00
546_D551_I1.5711.00
454_G512_Q1.5671.00
551_I565_R1.5551.00
537_S557_A1.5501.00
452_R519_E1.5481.00
368_H528_M1.5471.00
367_E540_Q1.5461.00
447_S464_L1.5451.00
469_G474_Q1.5441.00
338_S400_N1.5411.00
349_P352_S1.5131.00
371_I543_I1.5021.00
468_L475_L1.4961.00
558_E562_R1.4861.00
444_E447_S1.4731.00
530_T535_G1.4651.00
385_Q397_I1.4601.00
358_G549_Q1.4551.00
156_S163_A1.4501.00
346_F381_T1.4431.00
102_K106_L1.4411.00
450_L456_E1.4391.00
198_Q232_Q1.4361.00
445_A448_E1.4331.00
40_G281_A1.4311.00
364_N541_Q1.4301.00
264_W268_G1.4151.00
105_P322_P1.4101.00
519_E522_R1.4061.00
326_F408_N1.3991.00
335_D400_N1.3781.00
387_T418_V1.3751.00
443_D446_L1.3731.00
438_S441_S1.3701.00
515_E519_E1.3551.00
441_S490_L1.3491.00
374_R546_D1.3381.00
417_S488_A1.3321.00
430_L483_L1.3291.00
202_Q229_T1.3281.00
462_A467_W1.3271.00
61_L65_G1.3221.00
557_A561_A1.3181.00
346_F385_Q1.3181.00
374_R565_R1.3171.00
346_F390_W1.3131.00
445_A490_L1.2941.00
156_S160_F1.2921.00
222_Y436_L1.2861.00
341_L386_L1.2861.00
392_P404_I1.2851.00
184_A187_S1.2811.00
427_S467_W1.2791.00
565_R568_Q1.2761.00
469_G472_G1.2761.00
370_A536_L1.2751.00
344_V392_P1.2731.00
337_V365_A1.2721.00
450_L455_L1.2691.00
461_D466_S1.2681.00
36_L285_F1.2651.00
342_R360_S1.2621.00
102_K318_T1.2601.00
375_T509_T1.2451.00
458_L479_E1.2441.00
24_L76_G1.2371.00
268_G271_G1.2301.00
191_N236_A1.2221.00
435_L441_S1.2171.00
195_L236_A1.2161.00
338_S401_D1.2151.00
369_I527_L1.2021.00
386_L527_L1.1951.00
542_I556_H1.1941.00
449_I489_L1.1921.00
13_R94_H1.1811.00
442_S490_L1.1761.00
521_M526_V1.1721.00
455_L459_L1.1691.00
195_L198_Q1.1681.00
444_E448_E1.1661.00
214_T219_S1.1651.00
224_T228_N1.1641.00
409_E413_R1.1641.00
447_S450_L1.1641.00
33_I150_V1.1551.00
452_R489_L1.1521.00
343_D394_Q1.1501.00
345_Q357_K1.1491.00
365_A494_P1.1491.00
359_I382_L1.1481.00
402_S406_S1.1461.00
209_G424_H1.1451.00
275_Q278_A1.1441.00
112_A390_W1.1431.00
176_L180_L1.1411.00
361_L382_L1.1351.00
220_D224_T1.1341.00
27_V76_G1.1261.00
206_W222_Y1.1241.00
481_R503_E1.1131.00
363_V525_T1.1121.00
402_S407_L1.1101.00
475_L483_L1.1061.00
459_L464_L1.1031.00
97_I101_S1.0951.00
99_T317_L1.0941.00
162_L282_L1.0941.00
336_R365_A1.0921.00
231_I235_E1.0921.00
454_G509_T1.0811.00
40_G44_S1.0781.00
269_G273_N1.0751.00
354_Q393_Q1.0741.00
265_M269_G1.0721.00
530_T536_L1.0711.00
556_H560_L1.0701.00
341_L397_I1.0701.00
462_A465_N1.0661.00
368_H526_V1.0641.00
112_A384_Q1.0611.00
339_L386_L1.0611.00
118_E197_G1.0571.00
397_I404_I1.0551.00
114_Y118_E1.0521.00
460_E463_G1.0521.00
164_F168_G1.0511.00
115_R118_E1.0501.00
19_S23_V1.0481.00
419_V488_A1.0461.00
477_G482_R1.0431.00
102_K105_P1.0351.00
385_Q392_P1.0271.00
160_F164_F1.0271.00
488_A496_V1.0241.00
311_A315_S1.0231.00
101_S105_P1.0201.00
161_T273_N1.0141.00
226_L230_E1.0141.00
339_L399_L1.0131.00
375_T482_R1.0101.00
37_T41_W1.0101.00
222_Y225_Q1.0091.00
198_Q229_T1.0061.00
453_V486_A1.0041.00
348_Y355_A1.0021.00
86_D90_R1.0001.00
545_M550_I1.0001.00
327_P406_S1.0001.00
38_L62_P1.0001.00
340_T401_D0.9981.00
500_E531_H0.9951.00
454_G516_L0.9941.00
367_E553_Q0.9931.00
341_L382_L0.9921.00
155_L282_L0.9901.00
347_T355_A0.9901.00
17_M86_D0.9881.00
432_D435_L0.9871.00
24_L79_F0.9861.00
228_N232_Q0.9861.00
496_V524_K0.9841.00
423_V484_A0.9821.00
399_L495_L0.9801.00
344_V385_Q0.9791.00
454_G515_E0.9781.00
441_S445_A0.9761.00
129_T310_S0.9751.00
544_V565_R0.9731.00
448_E492_D0.9731.00
340_T360_S0.9721.00
411_A414_Q0.9711.00
494_P524_K0.9711.00
213_L222_Y0.9701.00
485_I498_L0.9641.00
460_E464_L0.9631.00
234_L238_R0.9621.00
149_M153_I0.9621.00
380_S384_Q0.9611.00
326_F409_E0.9611.00
468_L472_G0.9601.00
107_S323_E0.9571.00
239_R242_E0.9561.00
468_L474_Q0.9511.00
564_G567_Y0.9511.00
126_D310_S0.9451.00
188_T239_R0.9451.00
169_I258_A0.9441.00
463_G466_S0.9401.00
370_A530_T0.9371.00
399_L412_L0.9351.00
202_Q225_Q0.9351.00
57_F61_L0.9341.00
431_R464_L0.9321.00
218_A222_Y0.9321.00
122_R316_D0.9311.00
94_H98_Y0.9281.00
165_T265_M0.9281.00
225_Q229_T0.9271.00
354_Q394_Q0.9261.00
68_G72_T0.9261.00
358_G394_Q0.9241.00
469_G473_R0.9241.00
454_G519_E0.9221.00
98_Y102_K0.9221.00
434_L483_L0.9201.00
407_L412_L0.9201.00
24_L83_V0.9191.00
528_M539_F0.9181.00
431_R447_S0.9181.00
21_G84_S0.9171.00
270_V274_A0.9161.00
377_C545_M0.9131.00
512_Q515_E0.9101.00
40_G278_A0.9061.00
347_T350_E0.9031.00
324_V391_D0.8991.00
532_R535_G0.8981.00
392_P405_A0.8981.00
158_L278_A0.8971.00
419_V485_I0.8961.00
190_Q194_H0.8961.00
387_T497_L0.8941.00
266_A279_L0.8941.00
221_R225_Q0.8911.00
449_I490_L0.8901.00
9_A12_K0.8871.00
451_R460_E0.8871.00
231_I234_L0.8861.00
191_N195_L0.8851.00
359_I550_I0.8831.00
15_K19_S0.8831.00
227_E231_I0.8811.00
508_T512_Q0.8801.00
392_P397_I0.8791.00
446_L464_L0.8791.00
41_W45_A0.8791.00
175_F179_P0.8781.00
452_R520_M0.8781.00
334_A400_N0.8731.00
180_L184_A0.8731.00
110_G114_Y0.8711.00
184_A243_L0.8711.00
308_I312_V0.8681.00
93_Q97_I0.8681.00
191_N239_R0.8661.00
188_T236_A0.8661.00
396_E405_A0.8651.00
232_Q236_A0.8651.00
411_A415_T0.8651.00
370_A542_I0.8651.00
388_R409_E0.8631.00
61_L64_A0.8631.00
450_L453_V0.8621.00
558_E561_A0.8621.00
502_T513_I0.8601.00
446_L490_L0.8561.00
99_T123_V0.8561.00
550_I553_Q0.8531.00
368_H521_M0.8531.00
425_L483_L0.8511.00
152_T163_A0.8471.00
387_T416_I0.8471.00
155_L163_A0.8411.00
31_A72_T0.8401.00
339_L495_L0.8401.00
332_R407_L0.8351.00
16_W20_L0.8341.00
99_T314_I0.8341.00
404_I412_L0.8331.00
109_A323_E0.8321.00
368_H518_A0.8311.00
184_A188_T0.8301.00
345_Q393_Q0.8301.00
365_A400_N0.8291.00
14_H90_R0.8291.00
221_R224_T0.8271.00
425_L480_L0.8261.00
212_E216_F0.8241.00
177_M250_I0.8241.00
347_T352_S0.8241.00
514_L530_T0.8241.00
349_P353_Q0.8191.00
75_A79_F0.8161.00
31_A76_G0.8161.00
410_A414_Q0.8151.00
493_A524_K0.8141.00
453_V482_R0.8121.00
496_V521_M0.8111.00
435_L440_G0.8101.00
321_K325_T0.8091.00
192_L237_Q0.8081.00
429_T432_D0.8071.00
224_T227_E0.8071.00
225_Q228_N0.8071.00
187_S191_N0.8061.00
546_D549_Q0.8041.00
106_L320_Q0.8041.00
211_A384_Q0.8021.00
277_G281_A0.8021.00
332_R335_D0.8021.00
27_V72_T0.8001.00
102_K321_K0.7991.00
496_V526_V0.7971.00
407_L411_A0.7941.00
21_G87_A0.7941.00
210_Q214_T0.7881.00
223_R227_E0.7861.00
332_R411_A0.7791.00
337_V525_T0.7791.00
342_R362_Q0.7791.00
220_D223_R0.7771.00
119_L317_L0.7771.00
447_S459_L0.7771.00
31_A69_A0.7771.00
154_G158_L0.7751.00
434_L464_L0.7741.00
270_V279_L0.7721.00
37_T154_G0.7701.00
372_L544_V0.7701.00
392_P396_E0.7701.00
118_E122_R0.7681.00
161_T164_F0.7681.00
229_T232_Q0.7681.00
159_D163_A0.7661.00
398_L401_D0.7651.00
38_L69_A0.7641.00
510_E514_L0.7641.00
30_L34_G0.7611.00
103_L111_L0.7611.00
63_A67_R0.7611.00
414_Q491_H0.7591.00
435_L438_S0.7591.00
328_D332_R0.7571.00
416_I495_L0.7571.00
41_W62_P0.7541.00
23_V27_V0.7541.00
455_L483_L0.7521.00
435_L439_P0.7511.00
330_Q402_S0.7511.00
209_G212_E0.7511.00
157_F160_F0.7511.00
109_A113_R0.7501.00
331_T411_A0.7501.00
314_I318_T0.7481.00
330_Q406_S0.7471.00
8_L11_Y0.7461.00
133_L307_V0.7451.00
107_S324_V0.7451.00
72_T76_G0.7441.00
64_A67_R0.7441.00
347_T353_Q0.7411.00
357_K547_N0.7411.00
514_L535_G0.7401.00
557_A560_L0.7401.00
236_A239_R0.7391.00
375_T500_E0.7391.00
44_S47_A0.7391.00
560_L567_Y0.7391.00
481_R504_G0.7351.00
41_W44_S0.7351.00
238_R242_E0.7351.00
17_M83_V0.7331.00
443_D464_L0.7321.00
38_L65_G0.7301.00
37_T40_G0.7301.00
195_L229_T0.7291.00
477_G504_G0.7291.00
161_T269_G0.7291.00
266_A270_V0.7291.00
29_L146_V0.7281.00
154_G157_F0.7281.00
426_F433_N0.7261.00
12_K16_W0.7261.00
25_A143_G0.7241.00
162_L269_G0.7231.00
183_R187_S0.7231.00
78_Y82_L0.7221.00
129_T306_Q0.7181.00
144_A296_P0.7181.00
133_L304_L0.7171.00
422_R480_L0.7171.00
65_G68_G0.7161.00
199_Y233_W0.7161.00
176_L179_P0.7141.00
71_I75_A0.7131.00
179_P183_R0.7131.00
366_G525_T0.7121.00
334_A494_P0.7121.00
452_R456_E0.7111.00
8_L12_K0.7091.00
156_S167_G0.7081.00
232_Q235_E0.7081.00
366_G523_E0.7071.00
253_L257_L0.7071.00
145_F149_M0.7051.00
168_G171_L0.7041.00
329_T411_A0.7041.00
513_I516_L0.7011.00
235_E239_R0.7011.00
443_D450_L0.7011.00
45_A48_V0.7001.00
122_R126_D0.6991.00
20_L83_V0.6971.00
159_D274_A0.6961.00
353_Q357_K0.6961.00
399_L404_I0.6951.00
369_I553_Q0.6941.00
58_N61_L0.6941.00
150_V153_I0.6941.00
445_A449_I0.6921.00
17_M90_R0.6921.00
45_A58_N0.6921.00
502_T510_E0.6911.00
329_T408_N0.6901.00
98_Y101_S0.6901.00
398_L403_P0.6881.00
193_T196_R0.6871.00
425_L468_L0.6871.00
363_V367_E0.6871.00
158_L281_A0.6861.00
356_L545_M0.6851.00
141_L145_F0.6851.00
151_V289_A0.6851.00
562_R565_R0.6841.00
331_T408_N0.6791.00
106_L322_P0.6791.00
341_L359_I0.6791.00
99_T318_T0.6791.00
482_R509_T0.6781.00
33_I36_L0.6771.00
62_P65_G0.6771.00
455_L464_L0.6751.00
438_S492_D0.6741.00
279_L282_L0.6731.00
95_L127_V0.6721.00
536_L539_F0.6711.00
101_S223_R0.6701.00
282_L286_C0.6681.00
151_V290_A0.6681.00
454_G457_K0.6661.00
541_Q555_T0.6661.00
428_A467_W0.6661.00
191_N194_H0.6651.00
412_L416_I0.6651.00
438_S491_H0.6651.00
383_L527_L0.6641.00
346_F355_A0.6641.00
160_F163_A0.6631.00
385_Q390_W0.6611.00
485_I489_L0.6581.00
281_A284_V0.6571.00
265_M268_G0.6561.00
44_S48_V0.6561.00
92_L131_D0.6551.00
37_T158_L0.6531.00
384_Q390_W0.6531.00
130_L311_A0.6531.00
115_R201_Q0.6501.00
497_L527_L0.6501.00
552_E559_L0.6501.00
312_V316_D0.6471.00
510_E535_G0.6461.00
336_R525_T0.6451.00
340_T396_E0.6451.00
556_H559_L0.6451.00
435_L450_L0.6451.00
324_V388_R0.6441.00
482_R505_L0.6441.00
102_K320_Q0.6411.00
153_I156_S0.6391.00
307_V310_S0.6391.00
427_S469_G0.6391.00
553_Q558_E0.6391.00
371_I527_L0.6381.00
269_G272_G0.6371.00
197_G313_R0.6361.00
454_G513_I0.6361.00
438_S442_S0.6361.00
348_Y381_T0.6351.00
446_L449_I0.6341.00
446_L450_L0.6341.00
252_L295_A0.6331.00
121_N200_R0.6331.00
130_L314_I0.6331.00
552_E565_R0.6321.00
28_T77_R0.6301.00
361_L550_I0.6301.00
452_R516_L0.6301.00
456_E459_L0.6291.00
552_E560_L0.6271.00
427_S474_Q0.6271.00
98_Y318_T0.6271.00
118_E313_R0.6261.00
126_D193_T0.6261.00
43_L280_I0.6261.00
485_I513_I0.6251.00
85_H136_R0.6241.00
347_T394_Q0.6231.00
430_L459_L0.6231.00
99_T127_V0.6231.00
400_N494_P0.6221.00
108_P112_A0.6221.00
422_R471_G0.6211.00
337_V494_P0.6211.00
241_S245_A0.6201.00
58_N62_P0.6201.00
92_L96_R0.6191.00
429_T465_N0.6181.00
329_T332_R0.6181.00
14_H91_V0.6171.00
507_A510_E0.6161.00
541_Q558_E0.6161.00
552_E568_Q0.6141.00
344_V360_S0.6131.00
359_I545_M0.6111.00
90_R93_Q0.6111.00
547_N551_I0.6101.00
383_L418_V0.6101.00
472_G480_L0.6091.00
14_H17_M0.6091.00
510_E534_R0.6091.00
27_V31_A0.6091.00
281_A285_F0.6091.00
363_V368_H0.6081.00
113_R349_P0.6081.00
177_M254_I0.6081.00
453_V485_I0.6071.00
505_L509_T0.6071.00
350_E393_Q0.6061.00
25_A80_E0.6061.00
375_T530_T0.6061.00
267_S270_V0.6051.00
335_D415_T0.6051.00
163_A282_L0.6041.00
95_L130_L0.6041.00
40_G277_G0.6021.00
350_E353_Q0.6011.00
60_M63_A0.6001.00
364_N369_I0.5991.00
132_H303_H0.5981.00
368_H538_R0.5981.00
93_Q230_E0.5951.00
274_A279_L0.5941.00
544_V552_E0.5941.00
100_F104_L0.5931.00
181_F247_S0.5931.00
344_V395_G0.5931.00
159_D162_L0.5921.00
189_G240_Q0.5921.00
353_Q547_N0.5911.00
419_V498_L0.5911.00
13_R16_W0.5911.00
9_A98_Y0.5911.00
476_S479_E0.5911.00
409_E412_L0.5911.00
212_E215_I0.5901.00
466_S469_G0.5901.00
292_E296_P0.5901.00
110_G119_L0.5901.00
359_I543_I0.5891.00
121_N196_R0.5881.00
143_G147_V0.5871.00
417_S491_H0.5871.00
19_S22_I0.5861.00
195_L233_W0.5861.00
542_I555_T0.5861.00
193_T309_A0.5851.00
191_N232_Q0.5851.00
399_L407_L0.5831.00
495_L525_T0.5801.00
257_L261_L0.5791.00
350_E354_Q0.5791.00
514_L528_M0.5771.00
34_G69_A0.5771.00
354_Q358_G0.5771.00
458_L464_L0.5761.00
128_D131_D0.5761.00
402_S411_A0.5761.00
76_G79_F0.5751.00
132_H136_R0.5751.00
375_T505_L0.5741.00
327_P330_Q0.5731.00
344_V397_I0.5731.00
448_E520_M0.5731.00
562_R567_Y0.5731.00
144_A148_I0.5731.00
107_S110_G0.5721.00
16_W19_S0.5721.00
239_R243_L0.5721.00
478_G506_D0.5721.00
451_R464_L0.5721.00
121_N197_G0.5711.00
274_A278_A0.5711.00
438_S490_L0.5711.00
88_T135_L0.5701.00
433_N483_L0.5691.00
194_H198_Q0.5691.00
392_P403_P0.5681.00
495_L527_L0.5681.00
453_V489_L0.5671.00
357_K360_S0.5671.00
140_P296_P0.5661.00
188_T191_N0.5661.00
121_N125_A0.5651.00
435_L490_L0.5651.00
563_Q568_Q0.5651.00
537_S556_H0.5651.00
310_S313_R0.5641.00
328_D406_S0.5631.00
108_P389_A0.5611.00
261_L265_M0.5611.00
515_E518_A0.5611.00
235_E238_R0.5611.00
384_Q418_V0.5601.00
459_L462_A0.5601.00
202_Q206_W0.5591.00
28_T76_G0.5581.00
278_A281_A0.5581.00
516_L520_M0.5581.00
451_R457_K0.5571.00
47_A50_G0.5571.00
335_D399_L0.5561.00
515_E538_R0.5551.00
530_T534_R0.5541.00
335_D365_A0.5541.00
256_A260_I0.5531.00
89_F92_L0.5531.00
419_V501_P0.5521.00
245_A249_A0.5511.00
330_Q333_V0.5511.00
166_L286_C0.5511.00
371_I545_M0.5501.00
501_P530_T0.5491.00
328_D408_N0.5491.00
544_V551_I0.5491.00
509_T513_I0.5471.00
65_G69_A0.5471.00
489_L520_M0.5471.00
74_T78_Y0.5451.00
148_I152_T0.5451.00
127_V314_I0.5441.00
339_L363_V0.5441.00
368_H523_E0.5431.00
372_L536_L0.5431.00
161_T265_M0.5421.00
430_L455_L0.5421.00
434_L437_A0.5421.00
560_L563_Q0.5411.00
516_L519_E0.5411.00
430_L468_L0.5411.00
85_H89_F0.5411.00
334_A337_V0.5401.00
48_V51_V0.5391.00
104_L107_S0.5381.00
152_T156_S0.5371.00
364_N525_T0.5371.00
167_G171_L0.5351.00
14_H87_A0.5351.00
116_Q120_L0.5341.00
506_D509_T0.5331.00
11_Y18_L0.5331.00
122_R313_R0.5331.00
546_D568_Q0.5331.00
79_F83_V0.5331.00
151_V285_F0.5321.00
35_L39_S0.5311.00
13_R98_Y0.5311.00
57_F60_M0.5311.00
202_Q222_Y0.5311.00
111_L114_Y0.5301.00
535_G539_F0.5291.00
209_G426_F0.5291.00
38_L41_W0.5281.00
196_R200_R0.5281.00
363_V543_I0.5281.00
117_G201_Q0.5271.00
10_L95_L0.5271.00
109_A349_P0.5261.00
381_T385_Q0.5261.00
520_M523_E0.5261.00
528_M536_L0.5261.00
450_L458_L0.5261.00
123_V127_V0.5251.00
32_S73_R0.5251.00
327_P408_N0.5251.00
266_A269_G0.5251.00
489_L516_L0.5241.00
341_L385_Q0.5231.00
39_S43_L0.5221.00
46_S58_N0.5221.00
521_M524_K0.5221.00
82_L86_D0.5211.00
527_L543_I0.5211.00
37_T281_A0.5211.00
67_R71_I0.5201.00
197_G309_A0.5191.00
22_I25_A0.5181.00
420_P423_V0.5171.00
482_R504_G0.5171.00
144_A147_V0.5171.00
188_T240_Q0.5161.00
380_S383_L0.5161.00
388_R404_I0.5151.00
372_L533_L0.5151.00
355_A359_I0.5141.00
551_I563_Q0.5141.00
233_W237_Q0.5141.00
42_F62_P0.5141.00
17_M87_A0.5131.00
444_E451_R0.5121.00
381_T390_W0.5121.00
283_F286_C0.5111.00
514_L538_R0.5101.00
345_Q360_S0.5101.00
192_L240_Q0.5101.00
183_R186_K0.5081.00
213_L219_S0.5081.00
403_P407_L0.5081.00
199_Y203_L0.5071.00
125_A193_T0.5071.00
171_L176_L0.5041.00
38_L66_V0.5041.00
507_A534_R0.5031.00
485_I505_L0.5021.00
331_T402_S0.5021.00
408_N412_L0.5011.00
114_Y119_L0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ry2A 2 0.9668 100 0.084 Contact Map
4a82A 2 0.993 100 0.115 Contact Map
4q4hB 1 0.9878 100 0.144 Contact Map
3b5xA 2 0.9878 100 0.148 Contact Map
3b60A 2 0.9878 100 0.149 Contact Map
4f4cA 1 0.9756 100 0.153 Contact Map
4q4hA 1 0.9878 100 0.159 Contact Map
3zdqA 2 0.9756 100 0.161 Contact Map
4mrsA 2 0.9948 100 0.167 Contact Map
4q9hA 1 0.9965 100 0.171 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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