GABT - ECOLI - GREMLIN Contacts

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GABT - 4-aminobutyrate aminotransferase GabT

UniProt:	P22256	Sequences: MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10361
Length:	426 (383)
Sequences:	20916 (12401)
Seq/√Len:	633.6

ECOLI - GABT PUUE PAT ASTC ARGD BIOA GSA
BACSU - GABT YODT YHXA BIOK GSAB OAT GSA ARGD
HALSA - GSA Q9HHV4 Q9HPQ4
SULSO - Q97VA7 Q97U15 Q97VB5 ARGD GSA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
67_E	71_K	4.317	1.00
226_R	230_D	4.095	1.00
383_K	419_Q	4.012	1.00
34_R	42_E	3.616	1.00
184_I	224_R	3.611	1.00
330_K	411_R	3.405	1.00
92_I	313_K	3.213	1.00
29_R	36_W	3.107	1.00
250_T	256_Q	2.900	1.00
319_N	322_Q	2.894	1.00
330_K	407_D	2.800	1.00
61_K	317_Q	2.770	1.00
64_A	68_A	2.681	1.00
341_K	418_S	2.649	1.00
323_K	327_L	2.595	1.00
406_E	409_Q	2.549	1.00
46_F	413_G	2.378	1.00
92_I	316_E	2.354	1.00
310_E	313_K	2.347	1.00
334_G	414_L	2.346	1.00
224_R	227_A	2.316	1.00
61_K	310_E	2.281	1.00
379_R	382_D	2.261	1.00
227_A	231_E	2.257	1.00
326_D	407_D	2.246	1.00
61_K	314_V	2.232	1.00
28_D	38_V	2.203	1.00
59_H	314_V	2.198	1.00
34_R	409_Q	2.193	1.00
188_H	231_E	2.180	1.00
383_K	423_E	2.111	1.00
379_R	423_E	2.051	1.00
36_W	42_E	2.049	1.00
342_H	418_S	2.009	1.00
385_L	416_I	1.957	1.00
334_G	411_R	1.955	1.00
204_V	237_I	1.945	1.00
92_I	309_L	1.927	1.00
89_L	308_A	1.900	1.00
379_R	383_K	1.843	1.00
346_G	360_F	1.820	1.00
63_V	67_E	1.816	1.00
104_K	283_A	1.816	1.00
329_Q	333_D	1.810	1.00
283_A	287_D	1.807	1.00
332_K	336_L	1.801	1.00
84_E	88_E	1.797	1.00
37_D	41_R	1.791	1.00
187_I	225_L	1.787	1.00
314_V	318_E	1.778	1.00
412_Q	416_I	1.770	1.00
91_E	95_Q	1.769	1.00
28_D	72_K	1.767	1.00
130_G	199_D	1.766	1.00
66_V	307_A	1.762	1.00
203_I	229_C	1.761	1.00
108_V	277_A	1.747	1.00
41_R	384_G	1.732	1.00
205_I	225_L	1.726	1.00
103_K	283_A	1.704	1.00
188_H	192_K	1.700	1.00
34_R	412_Q	1.657	1.00
66_V	70_L	1.652	1.00
31_E	60_P	1.651	1.00
180_E	186_S	1.625	1.00
115_V	265_T	1.614	1.00
332_K	350_G	1.602	1.00
342_H	422_D	1.599	1.00
334_G	337_A	1.598	1.00
266_F	278_G	1.581	1.00
191_F	234_I	1.564	1.00
250_T	325_N	1.551	1.00
96_K	316_E	1.541	1.00
334_G	415_E	1.540	1.00
327_L	330_K	1.532	1.00
134_F	221_F	1.531	1.00
42_E	412_Q	1.521	1.00
271_A	276_L	1.509	1.00
90_C	107_L	1.487	1.00
125_A	285_V	1.482	1.00
33_C	409_Q	1.478	1.00
327_L	410_I	1.470	1.00
68_A	72_K	1.470	1.00
97_V	280_T	1.463	1.00
182_D	218_S	1.451	1.00
220_A	223_Q	1.438	1.00
33_C	404_T	1.433	1.00
332_K	355_I	1.425	1.00
238_A	254_M	1.424	1.00
92_I	95_Q	1.422	1.00
380_A	387_L	1.420	1.00
185_A	189_R	1.416	1.00
266_F	280_T	1.402	1.00
131_T	202_A	1.399	1.00
132_I	200_I	1.397	1.00
37_D	43_Y	1.392	1.00
379_R	420_C	1.391	1.00
310_E	314_V	1.386	1.00
188_H	224_R	1.380	1.00
88_E	309_L	1.378	1.00
383_K	420_C	1.374	1.00
323_K	326_D	1.367	1.00
226_R	236_L	1.365	1.00
105_T	280_T	1.359	1.00
226_R	229_C	1.356	1.00
122_A	237_I	1.345	1.00
117_N	279_V	1.337	1.00
330_K	334_G	1.333	1.00
309_L	313_K	1.332	1.00
60_P	64_A	1.331	1.00
27_A	35_V	1.330	1.00
270_I	276_L	1.326	1.00
118_A	265_T	1.325	1.00
119_V	131_T	1.324	1.00
276_L	305_C	1.322	1.00
334_G	418_S	1.315	1.00
336_L	339_A	1.314	1.00
59_H	318_E	1.304	1.00
88_E	313_K	1.300	1.00
185_A	188_H	1.295	1.00
192_K	232_H	1.294	1.00
405_I	410_I	1.292	1.00
184_I	228_L	1.290	1.00
250_T	255_E	1.289	1.00
418_S	422_D	1.288	1.00
180_E	183_A	1.282	1.00
338_I	414_L	1.281	1.00
94_N	105_T	1.280	1.00
125_A	288_A	1.273	1.00
29_R	72_K	1.270	1.00
203_I	225_L	1.269	1.00
322_Q	326_D	1.266	1.00
205_I	222_M	1.266	1.00
251_L	255_E	1.264	1.00
66_V	303_I	1.253	1.00
327_L	407_D	1.248	1.00
95_Q	316_E	1.245	1.00
263_L	281_G	1.242	1.00
238_A	259_V	1.241	1.00
115_V	204_V	1.239	1.00
14_A	94_N	1.237	1.00
31_E	58_L	1.236	1.00
270_I	278_G	1.235	1.00
220_A	257_M	1.232	1.00
254_M	264_T	1.224	1.00
338_I	418_S	1.222	1.00
257_M	351_L	1.221	1.00
64_A	67_E	1.218	1.00
276_L	308_A	1.206	1.00
188_H	228_L	1.196	1.00
130_G	166_V	1.195	1.00
104_K	287_D	1.187	1.00
126_T	201_A	1.178	1.00
65_A	310_E	1.177	1.00
55_T	314_V	1.174	1.00
14_A	91_E	1.174	1.00
260_A	282_R	1.166	1.00
313_K	317_Q	1.163	1.00
380_A	416_I	1.163	1.00
223_Q	227_A	1.160	1.00
108_V	279_V	1.157	1.00
256_Q	351_L	1.156	1.00
409_Q	412_Q	1.155	1.00
63_V	70_L	1.144	1.00
63_V	71_K	1.137	1.00
58_L	63_V	1.135	1.00
148_L	204_V	1.124	1.00
67_E	70_L	1.120	1.00
148_L	165_H	1.118	1.00
128_R	233_G	1.115	1.00
415_E	419_Q	1.113	1.00
107_L	305_C	1.107	1.00
31_E	42_E	1.106	1.00
34_R	44_L	1.100	1.00
263_L	279_V	1.100	1.00
385_L	413_G	1.094	1.00
380_A	420_C	1.086	1.00
188_H	232_H	1.083	1.00
407_D	411_R	1.075	1.00
325_N	329_Q	1.073	1.00
119_V	148_L	1.072	1.00
246_G	321_L	1.071	1.00
333_D	337_A	1.069	1.00
223_Q	258_G	1.067	1.00
183_A	186_S	1.063	1.00
321_L	324_A	1.062	1.00
112_S	145_T	1.060	1.00
272_G	311_V	1.041	1.00
380_A	385_L	1.040	1.00
252_F	266_F	1.034	1.00
383_K	416_I	1.033	1.00
89_L	309_L	1.029	1.00
229_C	234_I	1.028	1.00
28_D	84_E	1.023	1.00
235_M	285_V	1.022	1.00
33_C	44_L	1.018	1.00
62_V	307_A	1.015	1.00
412_Q	415_E	1.015	1.00
314_V	317_Q	1.014	1.00
188_H	227_A	1.002	1.00
121_I	279_V	0.996	1.00
179_S	190_I	0.996	1.00
411_R	415_E	0.987	1.00
28_D	40_G	0.982	1.00
133_A	204_V	0.981	1.00
225_L	236_L	0.973	1.00
208_V	351_L	0.967	1.00
315_F	320_L	0.963	1.00
249_G	255_E	0.962	1.00
133_A	167_Y	0.959	1.00
55_T	311_V	0.958	1.00
114_A	265_T	0.958	1.00
96_K	251_L	0.957	1.00
31_E	36_W	0.943	1.00
323_K	407_D	0.941	1.00
356_A	396_V	0.939	1.00
306_V	310_E	0.936	1.00
339_A	345_I	0.933	1.00
54_N	269_S	0.931	1.00
315_F	321_L	0.930	1.00
227_A	230_D	0.929	1.00
191_F	200_I	0.927	1.00
134_F	217_S	0.925	1.00
26_F	38_V	0.922	1.00
99_G	264_T	0.919	1.00
346_G	358_E	0.919	1.00
179_S	183_A	0.917	1.00
207_P	238_A	0.917	1.00
186_S	189_R	0.915	1.00
408_A	411_R	0.911	1.00
222_M	257_M	0.910	1.00
228_L	232_H	0.906	1.00
375_E	379_R	0.904	1.00
53_L	272_G	0.899	1.00
92_I	96_K	0.896	1.00
28_D	36_W	0.894	1.00
197_P	232_H	0.893	1.00
44_L	409_Q	0.890	1.00
347_D	358_E	0.889	1.00
245_A	315_F	0.888	1.00
219_P	223_Q	0.887	1.00
358_E	395_N	0.886	1.00
33_C	406_E	0.885	1.00
336_L	340_E	0.885	1.00
320_L	324_A	0.883	1.00
68_A	71_K	0.880	1.00
98_P	254_M	0.879	1.00
135_S	180_E	0.876	1.00
322_Q	325_N	0.875	1.00
61_K	64_A	0.874	1.00
147_A	162_M	0.873	1.00
202_A	237_I	0.872	1.00
112_S	142_T	0.869	1.00
64_A	71_K	0.868	1.00
256_Q	325_N	0.865	1.00
378_A	382_D	0.858	1.00
44_L	412_Q	0.854	1.00
216_A	351_L	0.853	1.00
61_K	313_K	0.851	1.00
109_T	113_E	0.848	1.00
46_F	385_L	0.845	1.00
26_F	87_L	0.845	1.00
46_F	405_I	0.844	1.00
55_T	62_V	0.840	1.00
130_G	192_K	0.831	1.00
118_A	237_I	0.829	1.00
233_G	284_E	0.828	1.00
121_I	281_G	0.826	1.00
122_A	202_A	0.824	1.00
405_I	413_G	0.817	1.00
354_M	400_L	0.817	1.00
179_S	182_D	0.816	1.00
125_A	235_M	0.816	1.00
334_G	410_I	0.815	1.00
99_G	103_K	0.815	1.00
96_K	312_L	0.812	1.00
341_K	422_D	0.810	1.00
33_C	402_P	0.809	1.00
328_G	332_K	0.807	1.00
338_I	342_H	0.806	1.00
38_V	84_E	0.806	1.00
68_A	306_V	0.804	1.00
353_A	405_I	0.802	1.00
230_D	260_A	0.801	1.00
226_R	259_V	0.799	1.00
74_S	274_F	0.798	1.00
122_A	235_M	0.797	1.00
321_L	325_N	0.796	1.00
130_G	200_I	0.795	1.00
220_A	224_R	0.795	1.00
337_A	341_K	0.793	1.00
108_V	114_A	0.793	1.00
243_S	354_M	0.792	1.00
245_A	312_L	0.790	1.00
129_S	199_D	0.789	1.00
333_D	336_L	0.788	1.00
126_T	233_G	0.786	1.00
274_F	304_A	0.781	1.00
32_N	404_T	0.781	1.00
217_S	220_A	0.781	1.00
203_I	234_I	0.780	1.00
61_K	65_A	0.779	1.00
251_L	321_L	0.779	1.00
27_A	30_A	0.773	1.00
399_I	417_I	0.772	1.00
88_E	92_I	0.771	1.00
105_T	278_G	0.770	1.00
245_A	270_I	0.770	1.00
326_D	330_K	0.766	1.00
208_V	354_M	0.764	1.00
191_F	228_L	0.757	1.00
89_L	305_C	0.757	1.00
187_I	203_I	0.754	1.00
186_S	190_I	0.753	1.00
85_P	306_V	0.751	1.00
230_D	236_L	0.750	1.00
296_G	299_A	0.745	1.00
224_R	228_L	0.743	1.00
51_A	400_L	0.743	1.00
119_V	204_V	0.742	1.00
374_A	378_A	0.742	1.00
252_F	264_T	0.742	1.00
254_M	259_V	0.740	1.00
419_Q	423_E	0.739	1.00
44_L	413_G	0.738	1.00
359_L	376_I	0.733	1.00
122_A	263_L	0.732	1.00
93_M	280_T	0.731	1.00
216_A	350_G	0.730	1.00
376_I	417_I	0.729	1.00
210_G	242_Q	0.728	1.00
110_T	113_E	0.727	1.00
229_C	236_L	0.726	1.00
62_V	272_G	0.725	1.00
349_R	358_E	0.723	1.00
337_A	340_E	0.722	1.00
65_A	307_A	0.721	1.00
181_D	217_S	0.721	1.00
196_A	199_D	0.721	1.00
245_A	266_F	0.721	1.00
337_A	418_S	0.717	1.00
330_K	333_D	0.716	1.00
348_V	355_I	0.715	1.00
207_P	222_M	0.714	1.00
251_L	316_E	0.714	1.00
48_G	400_L	0.713	1.00
245_A	251_L	0.712	1.00
200_I	234_I	0.710	1.00
124_A	293_G	0.706	1.00
208_V	248_T	0.705	1.00
266_F	270_I	0.704	1.00
248_T	256_Q	0.702	1.00
47_A	388_L	0.702	1.00
376_I	420_C	0.701	1.00
413_G	416_I	0.700	1.00
92_I	312_L	0.699	1.00
324_A	328_G	0.698	1.00
70_L	303_I	0.697	1.00
326_D	329_Q	0.696	1.00
179_S	186_S	0.696	1.00
86_Y	90_C	0.696	1.00
98_P	255_E	0.694	1.00
350_G	355_I	0.694	1.00
210_G	354_M	0.694	1.00
267_A	277_A	0.694	1.00
284_E	287_D	0.691	1.00
85_P	309_L	0.689	1.00
155_Y	159_M	0.687	1.00
377_V	389_S	0.687	1.00
98_P	260_A	0.686	1.00
129_S	164_G	0.679	1.00
121_I	289_V	0.679	1.00
41_R	382_D	0.678	1.00
15_I	90_C	0.677	1.00
99_G	260_A	0.676	1.00
132_I	187_I	0.676	1.00
83_Y	86_Y	0.673	1.00
85_P	89_L	0.671	1.00
181_D	224_R	0.669	1.00
72_K	84_E	0.668	1.00
120_K	294_L	0.668	1.00
348_V	357_I	0.668	1.00
117_N	294_L	0.667	1.00
223_Q	257_M	0.667	1.00
58_L	70_L	0.665	1.00
138_Y	141_R	0.664	1.00
358_E	396_V	0.663	1.00
115_V	145_T	0.663	1.00
69_Q	72_K	0.663	1.00
408_A	412_Q	0.662	1.00
108_V	113_E	0.660	1.00
44_L	385_L	0.659	1.00
35_V	386_I	0.658	1.00
327_L	353_A	0.657	1.00
281_G	286_M	0.654	1.00
205_I	236_L	0.653	1.00
236_L	259_V	0.652	1.00
85_P	305_C	0.652	1.00
237_I	263_L	0.651	1.00
209_Q	212_G	0.650	1.00
96_K	252_F	0.647	1.00
89_L	276_L	0.645	1.00
328_G	350_G	0.645	1.00
97_V	264_T	0.643	1.00
30_A	73_L	0.643	1.00
55_T	320_L	0.642	1.00
397_L	417_I	0.642	1.00
290_A	293_G	0.642	1.00
222_M	238_A	0.642	1.00
380_A	417_I	0.639	1.00
330_K	410_I	0.638	1.00
125_A	284_E	0.638	1.00
359_L	421_F	0.638	1.00
191_F	232_H	0.637	1.00
85_P	88_E	0.636	1.00
339_A	348_V	0.634	1.00
323_K	410_I	0.633	1.00
246_G	315_F	0.633	1.00
181_D	185_A	0.630	1.00
342_H	421_F	0.630	1.00
323_K	406_E	0.629	1.00
82_A	87_L	0.625	1.00
399_I	413_G	0.624	1.00
99_G	254_M	0.624	1.00
327_L	405_I	0.624	1.00
376_I	380_A	0.621	1.00
241_V	265_T	0.619	1.00
414_L	418_S	0.619	1.00
357_I	417_I	0.617	1.00
127_K	199_D	0.616	1.00
331_L	414_L	0.615	1.00
73_L	76_T	0.611	1.00
118_A	263_L	0.610	1.00
63_V	274_F	0.609	1.00
285_V	288_A	0.608	1.00
30_A	35_V	0.607	1.00
121_I	263_L	0.606	1.00
144_Y	162_M	0.605	1.00
134_F	225_L	0.604	1.00
184_I	188_H	0.602	1.00
245_A	252_F	0.600	1.00
219_P	351_L	0.600	1.00
219_P	257_M	0.597	1.00
62_V	311_V	0.596	1.00
331_L	355_I	0.596	1.00
420_C	423_E	0.595	1.00
127_K	130_G	0.594	1.00
42_E	416_I	0.594	1.00
209_Q	215_Y	0.593	1.00
128_R	234_I	0.593	1.00
359_L	372_L	0.590	1.00
331_L	410_I	0.589	1.00
327_L	406_E	0.588	1.00
14_A	87_L	0.588	1.00
97_V	252_F	0.588	1.00
111_G	241_V	0.586	1.00
33_C	405_I	0.586	1.00
385_L	412_Q	0.586	1.00
54_N	403_L	0.585	1.00
187_I	228_L	0.584	1.00
94_N	103_K	0.584	1.00
132_I	190_I	0.583	1.00
69_Q	85_P	0.582	1.00
97_V	266_F	0.581	1.00
62_V	310_E	0.581	1.00
89_L	107_L	0.580	1.00
324_A	403_L	0.579	1.00
155_Y	158_G	0.578	1.00
87_L	91_E	0.578	1.00
26_F	82_A	0.577	1.00
180_E	184_I	0.577	1.00
47_A	386_I	0.576	1.00
307_A	310_E	0.576	1.00
187_I	224_R	0.575	1.00
254_M	261_P	0.575	1.00
65_A	68_A	0.574	1.00
16_P	281_G	0.574	1.00
70_L	307_A	0.573	1.00
344_E	360_F	0.573	1.00
417_I	421_F	0.573	1.00
154_P	159_M	0.572	1.00
329_Q	332_K	0.571	1.00
267_A	298_Y	0.570	1.00
282_R	285_V	0.570	1.00
123_R	143_H	0.568	1.00
54_N	315_F	0.567	1.00
66_V	74_S	0.567	1.00
375_E	378_A	0.566	1.00
207_P	254_M	0.565	1.00
230_D	284_E	0.564	1.00
416_I	420_C	0.563	1.00
48_G	402_P	0.563	1.00
152_V	156_S	0.561	1.00
339_A	347_D	0.561	1.00
28_D	31_E	0.561	1.00
251_L	312_L	0.561	1.00
134_F	179_S	0.560	1.00
184_I	225_L	0.559	1.00
203_I	230_D	0.558	1.00
216_A	257_M	0.557	1.00
96_K	250_T	0.557	1.00
29_R	42_E	0.556	1.00
162_M	165_H	0.554	1.00
345_I	421_F	0.554	1.00
94_N	280_T	0.553	1.00
357_I	399_I	0.552	1.00
207_P	243_S	0.550	1.00
156_S	159_M	0.550	1.00
228_L	231_E	0.549	1.00
416_I	419_Q	0.548	1.00
373_T	389_S	0.548	1.00
372_L	375_E	0.547	1.00
309_L	316_E	0.547	1.00
331_L	334_G	0.547	1.00
324_A	353_A	0.546	1.00
153_N	156_S	0.544	1.00
330_K	414_L	0.543	1.00
211_E	398_R	0.542	1.00
123_R	160_G	0.541	0.99
30_A	53_L	0.540	0.99
242_Q	398_R	0.539	0.99
134_F	181_D	0.539	0.99
405_I	409_Q	0.539	0.99
316_E	319_N	0.538	0.99
187_I	221_F	0.535	0.99
128_R	199_D	0.534	0.99
134_F	205_I	0.533	0.99
301_N	304_A	0.533	0.99
65_A	313_K	0.533	0.99
381_R	386_I	0.533	0.99
94_N	99_G	0.533	0.99
385_L	420_C	0.532	0.99
404_T	409_Q	0.531	0.99
44_L	405_I	0.531	0.99
25_I	28_D	0.530	0.99
251_L	315_F	0.530	0.99
376_I	397_L	0.530	0.99
63_V	272_G	0.529	0.99
70_L	74_S	0.529	0.99
31_E	34_R	0.528	0.99
334_G	338_I	0.526	0.99
69_Q	73_L	0.526	0.99
189_R	192_K	0.526	0.99
413_G	417_I	0.525	0.99
345_I	357_I	0.523	0.99
119_V	144_Y	0.521	0.99
55_T	59_H	0.520	0.99
25_I	381_R	0.520	0.99
349_R	356_A	0.519	0.99
158_G	161_L	0.518	0.99
97_V	105_T	0.517	0.99
310_E	317_Q	0.516	0.99
329_Q	336_L	0.516	0.99
15_I	86_Y	0.516	0.99
72_K	85_P	0.516	0.99
242_Q	354_M	0.516	0.99
27_A	73_L	0.514	0.99
410_I	413_G	0.513	0.99
185_A	224_R	0.513	0.99
378_A	381_R	0.512	0.99
339_A	421_F	0.512	0.99
62_V	66_V	0.511	0.99
371_K	375_E	0.511	0.99
384_G	416_I	0.506	0.99
377_V	381_R	0.506	0.99
166_V	190_I	0.506	0.99
225_L	234_I	0.506	0.99
412_Q	419_Q	0.505	0.99
192_K	198_E	0.505	0.99
402_P	405_I	0.504	0.99
141_R	295_G	0.502	0.99
94_N	97_V	0.501	0.99
376_I	421_F	0.501	0.99
192_K	199_D	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3oksA	2	0.9883	100	0.348	Contact Map
4atqA	7	0.9906	100	0.351	Contact Map
1sffA	3	0.9953	100	0.364	Contact Map
4a0gA	2	0.9624	100	0.365	Contact Map
4ffcA	4	0.9836	100	0.365	Contact Map
4uoxA	3	0.9507	100	0.366	Contact Map
4e3qA	3	0.9789	100	0.37	Contact Map
2epjA	2	0.9437	100	0.377	Contact Map
1z7dA	2	0.8709	100	0.383	Contact Map
2ykyA	4	0.9225	100	0.385	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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