DMSA - ECOLI - GREMLIN Contacts

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DMSA - Dimethyl sulfoxide reductase DmsA

UniProt:	P18775	Sequences: MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGIHNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10232
Length:	814 (675)
Sequences:	8370 (5250)
Seq/√Len:	202.1

ECOLI - DMSA YNFF YNFE TORA TORZ NAPA FDHF BISC YDEP FDNG FDOG NUOG
BACSU - NASC YOAE YYAE YJGC FDHL
HALSA - DMSA
SULSO - Q97XX8 Q97ZA1 Q97V13

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
122_Y	137_R	5.983	1.00
736_I	755_A	4.844	1.00
145_D	576_R	4.569	1.00
743_R	812_E	4.331	1.00
564_K	572_E	3.706	1.00
307_E	372_R	3.476	1.00
299_G	356_A	3.474	1.00
730_D	764_G	3.464	1.00
743_R	750_E	3.361	1.00
150_N	153_R	3.322	1.00
354_E	364_A	3.291	1.00
695_L	734_R	3.247	1.00
555_Q	558_K	3.185	1.00
568_E	572_E	3.139	1.00
303_V	307_E	3.090	1.00
511_V	523_A	3.011	1.00
146_I	525_I	2.935	1.00
147_I	525_I	2.924	1.00
144_Y	576_R	2.909	1.00
312_Q	316_D	2.853	1.00
153_R	157_E	2.839	1.00
729_L	763_P	2.780	1.00
588_T	591_E	2.777	1.00
742_V	755_A	2.755	1.00
302_Y	306_T	2.750	1.00
139_S	142_E	2.738	1.00
296_L	360_T	2.720	1.00
746_N	809_V	2.711	1.00
320_V	647_S	2.705	1.00
726_I	755_A	2.700	1.00
745_F	810_Q	2.679	1.00
154_L	162_S	2.679	1.00
301_A	407_L	2.676	1.00
233_K	379_P	2.655	1.00
745_F	812_E	2.642	1.00
357_S	364_A	2.618	1.00
138_I	525_I	2.568	1.00
238_F	297_V	2.548	1.00
125_K	138_I	2.548	1.00
122_Y	562_E	2.532	1.00
125_K	525_I	2.521	1.00
731_A	757_V	2.469	1.00
721_R	754_E	2.460	1.00
125_K	146_I	2.440	1.00
726_I	811_V	2.439	1.00
266_R	373_E	2.438	1.00
284_E	369_K	2.422	1.00
363_P	366_K	2.353	1.00
366_K	369_K	2.336	1.00
310_V	315_L	2.324	1.00
308_N	312_Q	2.321	1.00
151_M	477_M	2.314	1.00
352_T	355_W	2.309	1.00
144_Y	572_E	2.299	1.00
734_R	810_Q	2.274	1.00
364_A	368_I	2.225	1.00
492_E	793_Q	2.221	1.00
745_F	750_E	2.185	1.00
269_I	282_E	2.184	1.00
738_N	757_V	2.176	1.00
301_A	337_Y	2.167	1.00
232_S	235_V	2.150	1.00
137_R	562_E	2.131	1.00
146_I	150_N	2.130	1.00
736_I	742_V	2.127	1.00
647_S	651_E	2.104	1.00
369_K	373_E	2.076	1.00
313_A	317_K	2.076	1.00
154_L	477_M	2.065	1.00
724_M	766_V	2.048	1.00
74_R	89_N	2.032	1.00
724_M	742_V	2.030	1.00
572_E	576_R	2.016	1.00
231_N	414_N	2.014	1.00
733_K	763_P	2.007	1.00
147_I	510_V	2.007	1.00
753_I	768_L	1.989	1.00
138_I	146_I	1.983	1.00
741_K	752_H	1.971	1.00
286_I	370_L	1.954	1.00
724_M	768_L	1.952	1.00
234_L	268_I	1.938	1.00
302_Y	353_P	1.937	1.00
286_I	362_V	1.936	1.00
560_R	563_C	1.934	1.00
612_E	616_Q	1.931	1.00
292_T	359_I	1.918	1.00
284_E	366_K	1.883	1.00
743_R	752_H	1.876	1.00
234_L	373_E	1.872	1.00
305_I	341_I	1.866	1.00
609_T	612_E	1.858	1.00
125_K	136_E	1.852	1.00
476_K	507_E	1.847	1.00
724_M	744_I	1.824	1.00
121_K	561_F	1.820	1.00
726_I	766_V	1.819	1.00
305_I	322_Y	1.818	1.00
303_V	372_R	1.799	1.00
738_N	756_K	1.796	1.00
307_E	368_I	1.783	1.00
296_L	367_I	1.765	1.00
516_M	520_A	1.763	1.00
354_E	368_I	1.751	1.00
72_P	91_G	1.745	1.00
572_E	575_K	1.737	1.00
303_V	353_P	1.733	1.00
309_L	375_G	1.730	1.00
536_M	555_Q	1.718	1.00
508_L	525_I	1.707	1.00
374_I	408_T	1.688	1.00
191_M	196_G	1.688	1.00
152_Q	156_K	1.683	1.00
695_L	766_V	1.682	1.00
374_I	380_A	1.677	1.00
260_R	283_D	1.677	1.00
124_M	526_L	1.675	1.00
145_D	149_T	1.668	1.00
357_S	367_I	1.665	1.00
357_S	363_P	1.661	1.00
339_A	342_L	1.634	1.00
479_W	512_I	1.606	1.00
407_L	652_I	1.604	1.00
147_I	527_L	1.603	1.00
741_K	754_E	1.599	1.00
700_F	767_A	1.599	1.00
725_W	758_T	1.597	1.00
303_V	368_I	1.596	1.00
530_C	565_T	1.595	1.00
766_V	809_V	1.580	1.00
413_I	416_G	1.578	1.00
729_L	732_Q	1.570	1.00
127_V	134_K	1.570	1.00
737_H	740_D	1.567	1.00
284_E	373_E	1.564	1.00
270_I	296_L	1.561	1.00
506_C	509_I	1.560	1.00
309_L	372_R	1.557	1.00
304_M	310_V	1.554	1.00
138_I	142_E	1.552	1.00
690_N	747_D	1.551	1.00
751_V	768_L	1.548	1.00
695_L	730_D	1.545	1.00
356_A	367_I	1.538	1.00
236_V	270_I	1.533	1.00
151_M	510_V	1.531	1.00
315_L	322_Y	1.526	1.00
124_M	137_R	1.506	1.00
59_I	77_V	1.499	1.00
158_Y	476_K	1.494	1.00
234_L	370_L	1.480	1.00
319_C	652_I	1.480	1.00
112_R	715_V	1.474	1.00
259_A	265_A	1.474	1.00
296_L	370_L	1.473	1.00
303_V	309_L	1.473	1.00
295_A	359_I	1.472	1.00
590_E	594_R	1.466	1.00
127_V	136_E	1.463	1.00
306_T	368_I	1.458	1.00
76_H	86_E	1.457	1.00
75_M	82_I	1.453	1.00
498_E	504_K	1.445	1.00
123_P	140_W	1.444	1.00
445_M	448_W	1.439	1.00
146_I	508_L	1.434	1.00
511_V	520_A	1.414	1.00
480_N	509_I	1.408	1.00
310_V	322_Y	1.407	1.00
142_E	146_I	1.406	1.00
655_Q	659_D	1.406	1.00
372_R	376_S	1.401	1.00
497_H	504_K	1.399	1.00
351_K	359_I	1.399	1.00
587_R	591_E	1.397	1.00
305_I	338_K	1.396	1.00
61_S	75_M	1.395	1.00
695_L	810_Q	1.385	1.00
306_T	342_L	1.382	1.00
288_I	362_V	1.380	1.00
60_W	74_R	1.379	1.00
164_Y	475_I	1.369	1.00
611_E	615_K	1.367	1.00
516_M	526_L	1.366	1.00
554_D	614_R	1.362	1.00
149_T	153_R	1.362	1.00
58_V	74_R	1.361	1.00
236_V	370_L	1.359	1.00
728_P	759_P	1.353	1.00
82_I	114_V	1.348	1.00
142_E	525_I	1.345	1.00
624_P	628_H	1.345	1.00
272_P	285_W	1.344	1.00
461_L	465_V	1.341	1.00
564_K	568_E	1.328	1.00
724_M	753_I	1.327	1.00
337_Y	341_I	1.326	1.00
165_L	191_M	1.320	1.00
127_V	132_E	1.315	1.00
152_Q	155_I	1.309	1.00
575_K	580_E	1.309	1.00
734_R	811_V	1.307	1.00
514_C	531_T	1.302	1.00
305_I	310_V	1.296	1.00
269_I	278_G	1.295	1.00
228_D	231_N	1.295	1.00
155_I	163_I	1.292	1.00
233_K	263_S	1.287	1.00
361_G	762_M	1.287	1.00
300_L	374_I	1.285	1.00
313_A	316_D	1.280	1.00
565_T	568_E	1.280	1.00
351_K	355_W	1.275	1.00
284_E	370_L	1.264	1.00
460_A	463_D	1.262	1.00
377_T	380_A	1.256	1.00
723_E	756_K	1.255	1.00
258_Q	261_Q	1.253	1.00
60_W	88_D	1.246	1.00
450_D	454_R	1.244	1.00
155_I	194_C	1.243	1.00
126_R	135_F	1.241	1.00
304_M	375_G	1.240	1.00
338_K	342_L	1.238	1.00
303_V	306_T	1.237	1.00
118_D	712_N	1.236	1.00
320_V	651_E	1.235	1.00
292_T	360_T	1.234	1.00
286_I	366_K	1.234	1.00
75_M	85_V	1.233	1.00
355_W	358_Q	1.231	1.00
692_Q	747_D	1.231	1.00
324_E	339_A	1.227	1.00
351_K	356_A	1.226	1.00
461_L	466_R	1.224	1.00
744_I	768_L	1.219	1.00
58_V	76_H	1.210	1.00
594_R	597_Y	1.210	1.00
727_N	763_P	1.208	1.00
74_R	88_D	1.202	1.00
768_L	787_I	1.201	1.00
236_V	300_L	1.200	1.00
144_Y	564_K	1.198	1.00
74_R	86_E	1.188	1.00
321_G	324_E	1.185	1.00
233_K	378_K	1.185	1.00
212_G	398_T	1.179	1.00
300_L	371_A	1.177	1.00
512_I	569_M	1.176	1.00
312_Q	338_K	1.173	1.00
477_M	510_V	1.171	1.00
758_T	761_M	1.171	1.00
233_K	377_T	1.171	1.00
568_E	575_K	1.169	1.00
268_I	370_L	1.169	1.00
388_P	401_I	1.168	1.00
463_D	466_R	1.166	1.00
591_E	594_R	1.165	1.00
163_I	477_M	1.164	1.00
309_L	376_S	1.163	1.00
410_N	416_G	1.162	1.00
645_T	651_E	1.161	1.00
303_V	367_I	1.160	1.00
148_A	576_R	1.159	1.00
495_R	498_E	1.153	1.00
692_Q	810_Q	1.149	1.00
297_V	401_I	1.143	1.00
530_C	563_C	1.139	1.00
81_E	115_Y	1.138	1.00
155_I	160_N	1.136	1.00
304_M	408_T	1.126	1.00
56_E	78_V	1.121	1.00
154_L	508_L	1.120	1.00
299_G	367_I	1.119	1.00
237_L	240_N	1.118	1.00
87_T	101_V	1.115	1.00
374_I	382_I	1.115	1.00
288_I	292_T	1.115	1.00
235_V	265_A	1.114	1.00
460_A	465_V	1.113	1.00
492_E	495_R	1.108	1.00
725_W	756_K	1.107	1.00
552_F	614_R	1.103	1.00
235_V	256_L	1.097	1.00
260_R	281_R	1.096	1.00
151_M	577_L	1.094	1.00
315_L	652_I	1.092	1.00
300_L	304_M	1.092	1.00
211_E	798_L	1.090	1.00
766_V	811_V	1.087	1.00
481_Y	570_T	1.083	1.00
154_L	507_E	1.082	1.00
350_A	355_W	1.080	1.00
512_I	529_D	1.080	1.00
462_R	466_R	1.078	1.00
121_K	137_R	1.077	1.00
362_V	367_I	1.077	1.00
274_Y	280_G	1.076	1.00
357_S	362_V	1.073	1.00
190_L	577_L	1.064	1.00
135_F	526_L	1.064	1.00
85_V	111_R	1.064	1.00
593_M	597_Y	1.060	1.00
357_S	360_T	1.058	1.00
300_L	370_L	1.055	1.00
150_N	154_L	1.051	1.00
234_L	377_T	1.049	1.00
159_G	162_S	1.047	1.00
300_L	404_L	1.044	1.00
356_A	360_T	1.044	1.00
365_D	368_I	1.044	1.00
144_Y	568_E	1.042	1.00
147_I	508_L	1.035	1.00
121_K	560_R	1.035	1.00
136_E	142_E	1.031	1.00
114_V	557_I	1.030	1.00
140_W	527_L	1.030	1.00
120_L	526_L	1.027	1.00
594_R	611_E	1.025	1.00
480_N	519_S	1.023	1.00
697_L	809_V	1.020	1.00
632_K	636_E	1.018	1.00
587_R	595_H	1.017	1.00
302_Y	352_T	1.015	1.00
693_Y	810_Q	1.015	1.00
162_S	476_K	1.014	1.00
297_V	400_A	1.013	1.00
724_M	811_V	1.012	1.00
693_Y	746_N	1.011	1.00
58_V	86_E	1.010	1.00
527_L	569_M	1.009	1.00
151_M	479_W	1.007	1.00
320_V	649_K	1.006	1.00
633_A	636_E	1.004	1.00
322_Y	407_L	1.001	1.00
536_M	552_F	0.997	1.00
533_S	556_V	0.992	1.00
613_F	618_I	0.989	1.00
234_L	380_A	0.987	1.00
590_E	610_F	0.980	1.00
338_K	341_I	0.979	1.00
302_Y	342_L	0.978	1.00
403_M	652_I	0.977	1.00
698_T	765_V	0.975	1.00
140_W	569_M	0.975	1.00
237_L	267_M	0.973	1.00
725_W	760_R	0.970	1.00
238_F	270_I	0.970	1.00
342_L	350_A	0.969	0.99
76_H	84_Y	0.969	0.99
448_W	451_A	0.968	0.99
72_P	88_D	0.968	0.99
353_P	368_I	0.966	0.99
163_I	194_C	0.961	0.99
299_G	303_V	0.960	0.99
536_M	590_E	0.958	0.99
268_I	373_E	0.958	0.99
229_I	381_F	0.957	0.99
690_N	808_L	0.956	0.99
289_R	762_M	0.953	0.99
310_V	407_L	0.953	0.99
216_T	399_R	0.953	0.99
590_E	614_R	0.951	0.99
290_P	765_V	0.947	0.99
406_I	650_I	0.945	0.99
727_N	761_M	0.944	0.99
471_L	495_R	0.943	0.99
727_N	757_V	0.943	0.99
460_A	466_R	0.943	0.99
470_K	473_V	0.941	0.99
364_A	367_I	0.941	0.99
322_Y	338_K	0.939	0.99
242_P	256_L	0.939	0.99
144_Y	573_L	0.936	0.99
270_I	286_I	0.936	0.99
726_I	736_I	0.935	0.99
380_A	410_N	0.934	0.99
147_I	573_L	0.933	0.99
75_M	533_S	0.930	0.99
478_I	506_C	0.930	0.99
694_P	810_Q	0.928	0.99
498_E	505_K	0.926	0.99
303_V	371_A	0.926	0.99
494_N	498_E	0.926	0.99
520_A	526_L	0.925	0.99
729_L	759_P	0.925	0.99
748_R	807_N	0.923	0.99
266_R	283_D	0.922	0.99
141_E	576_R	0.918	0.99
319_C	406_I	0.918	0.99
368_I	372_R	0.915	0.99
580_E	583_F	0.915	0.99
447_M	450_D	0.914	0.99
280_G	760_R	0.914	0.99
270_I	370_L	0.913	0.99
610_F	614_R	0.912	0.99
613_F	616_Q	0.909	0.99
550_V	608_P	0.906	0.99
751_V	790_L	0.906	0.99
477_M	508_L	0.905	0.99
294_A	397_A	0.904	0.99
272_P	287_P	0.902	0.99
369_K	372_R	0.897	0.99
479_W	573_L	0.894	0.99
362_V	366_K	0.892	0.99
486_L	497_H	0.892	0.99
315_L	407_L	0.889	0.99
78_V	83_K	0.889	0.99
355_W	359_I	0.888	0.99
270_I	288_I	0.888	0.99
266_R	284_E	0.888	0.99
311_D	413_I	0.886	0.99
557_I	560_R	0.885	0.99
352_T	356_A	0.883	0.99
748_R	791_T	0.883	0.99
230_E	255_Y	0.883	0.99
296_L	300_L	0.883	0.99
689_L	808_L	0.883	0.99
337_Y	407_L	0.882	0.99
484_N	708_S	0.882	0.99
274_Y	760_R	0.881	0.99
530_C	559_P	0.879	0.99
288_I	296_L	0.879	0.99
67_C	71_C	0.875	0.99
631_Y	634_F	0.873	0.99
726_I	742_V	0.873	0.99
529_D	569_M	0.872	0.99
594_R	598_A	0.871	0.99
60_W	90_T	0.870	0.99
616_Q	619_F	0.870	0.99
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63_C	67_C	0.865	0.99
386_W	390_R	0.864	0.99
234_L	266_R	0.862	0.99
63_C	71_C	0.862	0.99
695_L	811_V	0.861	0.99
460_A	464_G	0.860	0.99
441_T	451_A	0.857	0.99
379_P	416_G	0.854	0.99
268_I	284_E	0.854	0.99
536_M	589_Q	0.850	0.99
753_I	787_I	0.850	0.99
444_S	447_M	0.849	0.99
237_L	277_T	0.849	0.99
151_M	155_I	0.849	0.99
306_T	353_P	0.848	0.99
486_L	493_I	0.846	0.99
167_Y	170_G	0.844	0.99
295_A	299_G	0.844	0.99
458_M	461_L	0.844	0.99
731_A	736_I	0.844	0.99
726_I	731_A	0.842	0.99
190_L	570_T	0.842	0.99
259_A	263_S	0.840	0.99
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299_G	355_W	0.836	0.99
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298_N	351_K	0.835	0.98
274_Y	759_P	0.835	0.98
634_F	637_D	0.834	0.98
299_G	358_Q	0.833	0.98
287_P	762_M	0.832	0.98
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303_V	364_A	0.829	0.98
59_I	556_V	0.827	0.98
517_T	520_A	0.826	0.98
353_P	356_A	0.824	0.98
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147_I	150_N	0.816	0.98
69_S	248_S	0.815	0.98
713_V	716_L	0.810	0.98
744_I	753_I	0.810	0.98
151_M	194_C	0.808	0.98
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722_Q	772_A	0.804	0.98
762_M	765_V	0.801	0.98
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125_K	142_E	0.797	0.98
80_G	558_K	0.797	0.98
357_S	365_D	0.797	0.98
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228_D	415_G	0.788	0.98
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643_L	650_I	0.786	0.98
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518_S	773_W	0.785	0.98
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736_I	757_V	0.780	0.98
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536_M	554_D	0.778	0.98
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315_L	319_C	0.773	0.98
747_D	808_L	0.772	0.98
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733_K	764_G	0.533	0.84
658_A	661_A	0.532	0.84
453_E	458_M	0.532	0.84
459_T	462_R	0.531	0.84
687_D	748_R	0.531	0.84
352_T	357_S	0.531	0.84
592_W	596_L	0.530	0.84
183_G	535_Q	0.530	0.84
296_L	357_S	0.530	0.84
612_E	619_F	0.529	0.84
571_S	574_A	0.529	0.84
299_G	371_A	0.529	0.84
442_S	448_W	0.528	0.84
457_E	464_G	0.527	0.84
459_T	466_R	0.527	0.84
442_S	446_F	0.526	0.84
80_G	115_Y	0.526	0.84
209_I	384_Q	0.525	0.84
431_R	436_E	0.525	0.84
217_Y	411_V	0.525	0.84
518_S	521_K	0.525	0.84
120_L	516_M	0.524	0.83
356_A	359_I	0.524	0.83
77_V	83_K	0.524	0.83
453_E	459_T	0.524	0.83
154_L	476_K	0.524	0.83
223_G	226_P	0.523	0.83
443_I	453_E	0.523	0.83
238_F	296_L	0.523	0.83
217_Y	650_I	0.523	0.83
619_F	622_R	0.522	0.83
449_T	452_I	0.521	0.83
240_N	385_G	0.521	0.83
617_G	620_K	0.521	0.83
77_V	82_I	0.521	0.83
125_K	147_I	0.521	0.83
628_H	632_K	0.521	0.83
571_S	584_T	0.520	0.83
595_H	598_A	0.520	0.83
623_D	628_H	0.520	0.83
304_M	380_A	0.519	0.83
589_Q	593_M	0.519	0.83
571_S	585_E	0.519	0.83
133_G	136_E	0.519	0.83
292_T	356_A	0.518	0.83
458_M	465_V	0.518	0.83
272_P	698_T	0.518	0.83
442_S	445_M	0.518	0.83
576_R	579_V	0.517	0.83
180_W	184_N	0.517	0.83
267_M	281_R	0.517	0.83
632_K	635_R	0.516	0.83
723_E	754_E	0.516	0.83
792_T	803_P	0.516	0.83
206_S	209_I	0.516	0.83
627_H	631_Y	0.516	0.83
445_M	453_E	0.515	0.82
244_E	703_K	0.515	0.82
730_D	757_V	0.515	0.82
722_Q	769_G	0.514	0.82
447_M	453_E	0.514	0.82
608_P	618_I	0.514	0.82
141_E	564_K	0.514	0.82
580_E	584_T	0.514	0.82
182_P	185_T	0.512	0.82
393_N	397_A	0.512	0.82
77_V	81_E	0.511	0.82
136_E	146_I	0.511	0.82
375_G	380_A	0.510	0.82
299_G	302_Y	0.510	0.82
388_P	398_T	0.510	0.82
589_Q	592_W	0.510	0.82
266_R	376_S	0.509	0.82
73_L	110_M	0.509	0.82
122_Y	561_F	0.509	0.82
457_E	462_R	0.509	0.82
289_R	358_Q	0.508	0.82
447_M	456_P	0.508	0.82
361_G	764_G	0.508	0.82
194_C	579_V	0.508	0.82
236_V	404_L	0.508	0.82
300_L	375_G	0.508	0.82
242_P	277_T	0.507	0.81
386_W	389_Q	0.507	0.81
318_Y	641_N	0.507	0.81
275_T	278_G	0.506	0.81
187_V	198_L	0.506	0.81
697_L	744_I	0.506	0.81
647_S	650_I	0.506	0.81
589_Q	600_S	0.506	0.81
432_M	437_N	0.506	0.81
687_D	747_D	0.506	0.81
206_S	422_E	0.506	0.81
226_P	229_I	0.506	0.81
479_W	510_V	0.505	0.81
322_Y	652_I	0.505	0.81
399_R	653_Y	0.505	0.81
314_F	641_N	0.505	0.81
727_N	734_R	0.505	0.81
240_N	383_S	0.504	0.81
378_K	413_I	0.503	0.81
445_M	456_P	0.502	0.81
695_L	727_N	0.502	0.81
245_T	385_G	0.502	0.81
442_S	447_M	0.502	0.81
294_A	297_V	0.501	0.81
287_P	366_K	0.501	0.81
728_P	758_T	0.501	0.81
447_M	454_R	0.501	0.81
579_V	582_Q	0.501	0.81
521_K	775_D	0.500	0.81
72_P	97_G	0.500	0.81
491_S	802_N	0.500	0.81
441_T	444_S	0.500	0.81

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1kqfA	3	0.8882	100	0.232	Contact Map
2vpzA	1	0.844	100	0.234	Contact Map
2ivfA	1	0.887	100	0.248	Contact Map
1h0hA	1	0.887	100	0.267	Contact Map
1q16A	2	0.9423	100	0.267	Contact Map
2e7zA	1	0.8305	100	0.271	Contact Map
2iv2X	1	0.7948	100	0.286	Contact Map
2napA	1	0.8305	100	0.293	Contact Map
1tmoA	1	0.8735	100	0.293	Contact Map
3ml1A	1	0.8747	100	0.294	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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