GREMLIN Database
BETA - Oxygen-dependent choline dehydrogenase
UniProt: P17444 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10109
Length: 556 (518)
Sequences: 11244 (8340)
Seq/√Len: 366.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
225_I232_A3.4491.00
117_S120_D3.3471.00
481_G486_S3.3031.00
237_W248_A3.2971.00
224_H236_E3.2531.00
429_R457_D3.2301.00
489_D493_R3.1771.00
392_P417_H3.1501.00
226_I236_E3.0881.00
36_G219_H3.0561.00
503_V527_I3.0201.00
124_Y529_D3.0191.00
130_T142_D2.9941.00
456_T459_Q2.9401.00
505_A520_T2.9291.00
12_S89_S2.9271.00
491_E534_Q2.8841.00
263_S478_C2.8651.00
121_C522_M2.8501.00
265_Q269_R2.8481.00
425_R461_D2.8061.00
275_A279_A2.7551.00
275_A288_E2.6311.00
488_V507_I2.6281.00
277_L280_E2.6021.00
167_Q439_A2.5951.00
253_E501_R2.5161.00
294_E396_H2.5111.00
403_D406_Q2.4501.00
418_E422_Q2.3281.00
401_S406_Q2.3161.00
478_C506_S2.3141.00
236_E247_R2.3011.00
492_G527_I2.2661.00
101_A119_L2.2521.00
392_P419_Q2.2321.00
520_T524_G2.2131.00
3_F30_L2.2011.00
268_Q399_I2.1911.00
108_A117_S2.1691.00
217_R220_A2.1491.00
98_R129_E2.1381.00
19_T23_E2.1001.00
231_R498_E2.0701.00
432_R447_E2.0611.00
166_V172_R2.0461.00
64_Y262_A2.0381.00
6_I248_A2.0371.00
526_K530_M2.0291.00
231_R499_G2.0041.00
226_I234_G1.9941.00
430_I433_E1.9781.00
24_D532_R1.9661.00
30_L248_A1.9651.00
220_A237_W1.9251.00
508_M523_I1.9231.00
32_L220_A1.9211.00
491_E533_G1.9151.00
462_E466_N1.9101.00
400_K409_A1.9101.00
268_Q277_L1.9071.00
223_D238_L1.9031.00
30_L217_R1.8971.00
494_V500_L1.8851.00
223_D236_E1.8811.00
22_T211_R1.8751.00
84_G90_L1.8631.00
234_G254_V1.8581.00
478_C487_V1.8571.00
277_L399_I1.8511.00
7_I17_L1.8511.00
227_F272_V1.8491.00
23_E532_R1.8401.00
222_T266_I1.8381.00
226_I247_R1.8261.00
238_L405_H1.8251.00
277_L281_F1.8071.00
3_F215_T1.7951.00
168_A437_Q1.7821.00
294_E398_R1.7711.00
421_W461_D1.7681.00
127_K529_D1.7671.00
69_E411_L1.7661.00
32_L237_W1.7461.00
268_Q398_R1.7351.00
13_A520_T1.7311.00
413_N416_S1.7211.00
20_R525_E1.7181.00
274_N288_E1.7121.00
96_Y518_A1.7041.00
200_T521_I1.7021.00
475_C511_I1.7021.00
5_Y27_T1.7011.00
6_I30_L1.6981.00
221_M405_H1.6911.00
262_A265_Q1.6901.00
32_L217_R1.6741.00
486_S495_H1.6591.00
67_E409_A1.6521.00
82_G88_S1.6481.00
507_I523_I1.6461.00
163_E166_V1.6401.00
115_N120_D1.6341.00
24_D27_T1.6331.00
228_D233_V1.6241.00
287_H497_L1.6171.00
491_E530_M1.5981.00
12_S517_N1.5941.00
85_L218_T1.5851.00
277_L294_E1.5811.00
227_F286_V1.5801.00
124_Y127_K1.5771.00
288_E496_G1.5641.00
296_L477_T1.5631.00
99_G104_L1.5561.00
400_K406_Q1.5541.00
396_H411_L1.5511.00
503_V524_G1.5271.00
8_I225_I1.5261.00
10_A85_L1.5241.00
291_G485_M1.5071.00
128_A521_I1.5051.00
227_F230_K1.5041.00
127_K525_E1.4921.00
15_N200_T1.4871.00
106_N510_Q1.4801.00
85_L216_I1.4791.00
239_E242_S1.4771.00
32_L235_V1.4531.00
277_L398_R1.4411.00
130_T146_S1.4401.00
517_N521_I1.4271.00
122_L126_R1.4041.00
17_L503_V1.3951.00
328_A332_F1.3941.00
297_Q394_R1.3901.00
27_T532_R1.3861.00
233_V249_T1.3831.00
279_A285_L1.3801.00
306_Y435_M1.3741.00
263_S502_V1.3711.00
162_I166_V1.3691.00
483_D486_S1.3581.00
422_Q461_D1.3551.00
428_I460_L1.3461.00
255_L531_I1.3451.00
226_I233_V1.3441.00
261_I397_V1.3431.00
326_I329_E1.3331.00
217_R239_E1.3281.00
10_A15_N1.3271.00
145_V203_G1.3201.00
198_A203_G1.3121.00
492_G507_I1.3101.00
458_E461_D1.3001.00
16_V521_I1.2961.00
274_N294_E1.2961.00
73_N466_N1.2951.00
204_Y525_E1.2891.00
34_A62_W1.2851.00
230_K498_E1.2691.00
113_L490_G1.2651.00
114_E490_G1.2641.00
329_E333_G1.2621.00
31_L214_L1.2581.00
459_Q462_E1.2571.00
479_K483_D1.2511.00
209_K216_I1.2491.00
479_K485_M1.2421.00
307_E446_R1.2381.00
81_R88_S1.2371.00
438_P442_Q1.2331.00
441_D444_R1.2291.00
79_C261_I1.2291.00
291_G295_N1.2281.00
266_I269_R1.2151.00
268_Q294_E1.2111.00
361_Q515_N1.2041.00
275_A285_L1.1991.00
22_T214_L1.1971.00
67_E400_K1.1951.00
128_A204_Y1.1941.00
268_Q274_N1.1891.00
67_E411_L1.1881.00
300_L468_A1.1861.00
223_D405_H1.1821.00
255_L503_V1.1821.00
12_S521_I1.1811.00
482_Y490_G1.1801.00
146_S198_A1.1751.00
274_N277_L1.1731.00
159_E163_E1.1721.00
69_E412_F1.1651.00
239_E244_I1.1621.00
422_Q425_R1.1621.00
89_S200_T1.1621.00
225_I256_L1.1421.00
295_N479_K1.1391.00
34_A83_K1.1391.00
329_E335_T1.1381.00
475_C516_L1.1381.00
65_E76_R1.1371.00
421_W465_R1.1341.00
232_A254_V1.1331.00
260_A264_P1.1311.00
108_A115_N1.1291.00
104_L519_T1.1261.00
272_V497_L1.1261.00
163_E167_Q1.1251.00
28_S215_T1.1211.00
497_L500_L1.1211.00
16_V204_Y1.1191.00
227_F497_L1.1171.00
529_D533_G1.1131.00
422_Q426_D1.1111.00
230_K287_H1.1091.00
516_L520_T1.1021.00
325_K329_E1.1011.00
167_Q437_Q1.0941.00
19_T208_A1.0941.00
99_G125_Y1.0931.00
10_A31_L1.0931.00
28_S213_N1.0781.00
289_L495_H1.0751.00
398_R409_A1.0661.00
27_T252_K1.0661.00
37_P209_K1.0651.00
176_L185_G1.0641.00
236_E243_T1.0631.00
196_R334_G1.0621.00
237_W246_T1.0561.00
66_T79_C1.0531.00
120_D526_K1.0531.00
426_D429_R1.0531.00
146_S193_P1.0451.00
106_N111_P1.0421.00
15_N31_L1.0401.00
139_H143_G1.0391.00
488_V502_V1.0381.00
198_A202_R1.0371.00
17_L524_G1.0341.00
235_V254_V1.0291.00
463_F467_H1.0241.00
206_D209_K1.0231.00
7_I18_A1.0221.00
319_Q322_N1.0191.00
133_M149_T1.0171.00
493_R498_E1.0151.00
352_R355_F1.0151.00
527_I531_I1.0141.00
113_L482_Y1.0131.00
125_Y522_M1.0071.00
493_R501_R1.0051.00
281_F402_R1.0041.00
336_G339_A1.0021.00
8_I258_A1.0011.00
396_H413_N0.9951.00
327_G330_W0.9951.00
3_F6_I0.9941.00
291_G479_K0.9931.00
292_V487_V0.9921.00
20_R127_K0.9861.00
438_P441_D0.9861.00
261_I410_I0.9851.00
101_A105_D0.9821.00
88_S91_I0.9821.00
239_E243_T0.9811.00
425_R457_D0.9801.00
17_L255_L0.9801.00
281_F399_I0.9781.00
349_I430_I0.9771.00
326_I337_V0.9741.00
187_M346_G0.9701.00
419_Q422_Q0.9671.00
269_R404_P0.9671.00
433_E436_H0.9661.00
17_L528_A0.9661.00
144_P204_Y0.9631.00
238_L243_T0.9631.00
126_R140_G0.9621.00
488_V495_H0.9611.00
132_D146_S0.9551.00
418_E421_W0.9551.00
16_V19_T0.9441.00
527_I530_M0.9431.00
22_T29_V0.9431.00
337_V340_S0.9411.00
276_E279_A0.9391.00
124_Y526_K0.9381.00
104_L125_Y0.9371.00
228_D249_T0.9361.00
258_A266_I0.9361.00
258_A262_A0.9341.00
217_R237_W0.9341.00
482_Y495_H0.9331.00
226_I249_T0.9301.00
291_G486_S0.9301.00
250_A254_V0.9261.00
223_D269_R0.9241.00
130_T144_P0.9231.00
8_I235_V0.9211.00
223_D243_T0.9181.00
47_M50_A0.9151.00
516_L519_T0.9111.00
141_G145_V0.9081.00
97_I514_G0.9081.00
97_I515_N0.9041.00
201_A206_D0.9031.00
384_C431_T0.9031.00
37_P85_L0.8981.00
96_Y190_T0.8961.00
529_D532_R0.8961.00
512_I519_T0.8931.00
6_I250_A0.8881.00
6_I235_V0.8881.00
295_N394_R0.8881.00
473_H515_N0.8851.00
135_E141_G0.8851.00
170_Y430_I0.8841.00
297_Q511_I0.8841.00
386_V427_A0.8831.00
492_G530_M0.8831.00
101_A118_Y0.8831.00
503_V531_I0.8791.00
219_H240_G0.8781.00
225_I500_L0.8771.00
227_F233_V0.8741.00
22_T213_N0.8741.00
98_R122_L0.8731.00
45_T84_G0.8711.00
260_A475_C0.8701.00
128_A525_E0.8661.00
6_I254_V0.8661.00
298_D470_T0.8661.00
325_K328_A0.8641.00
268_Q292_V0.8631.00
384_C435_M0.8611.00
38_D90_L0.8521.00
124_Y525_E0.8521.00
5_Y255_L0.8501.00
337_V341_N0.8481.00
418_E461_D0.8471.00
493_R534_Q0.8451.00
419_Q423_E0.8431.00
34_A221_M0.8401.00
425_R464_V0.8391.00
19_T22_T0.8391.00
365_L369_I0.8361.00
161_M165_G0.8361.00
105_D109_Q0.8361.00
232_A500_L0.8341.00
225_I254_V0.8341.00
73_N462_E0.8331.00
72_M75_R0.8331.00
338_G341_N0.8321.00
488_V492_G0.8311.00
160_A443_Y0.8311.00
220_A239_E0.8281.00
190_T517_N0.8271.00
260_A505_A0.8261.00
98_R125_Y0.8251.00
38_D84_G0.8241.00
257_C503_V0.8221.00
193_P198_A0.8221.00
118_Y122_L0.8201.00
108_A113_L0.8201.00
55_L58_K0.8201.00
424_F427_A0.8161.00
264_P477_T0.8141.00
90_L199_S0.8101.00
43_F46_Q0.8091.00
120_D123_P0.8081.00
230_K286_V0.8081.00
130_T141_G0.8071.00
170_Y184_F0.8071.00
285_L288_E0.8051.00
181_Q187_M0.8001.00
228_D231_R0.8001.00
324_P328_A0.7991.00
111_P510_Q0.7971.00
146_S149_T0.7971.00
80_G472_F0.7941.00
81_R265_Q0.7911.00
184_F347_G0.7911.00
256_L263_S0.7911.00
8_I256_L0.7901.00
19_T207_Q0.7891.00
296_L397_V0.7881.00
4_D27_T0.7881.00
32_L248_A0.7861.00
112_G115_N0.7851.00
217_R248_A0.7831.00
425_R429_R0.7821.00
432_R436_H0.7821.00
71_F416_S0.7821.00
8_I266_I0.7791.00
3_F217_R0.7781.00
494_V497_L0.7761.00
501_R530_M0.7751.00
461_D465_R0.7751.00
382_F435_M0.7731.00
128_A518_A0.7731.00
138_Y178_G0.7721.00
160_A163_E0.7711.00
309_K445_G0.7701.00
136_N141_G0.7661.00
106_N109_Q0.7651.00
421_W425_R0.7651.00
97_I176_L0.7631.00
89_S517_N0.7631.00
483_D495_H0.7611.00
99_G512_I0.7601.00
225_I235_V0.7581.00
323_Q326_I0.7561.00
370_N373_G0.7521.00
274_N398_R0.7521.00
398_R411_L0.7511.00
145_V150_S0.7501.00
140_G145_V0.7491.00
505_A508_M0.7481.00
148_T151_K0.7471.00
167_Q438_P0.7451.00
415_M468_A0.7441.00
227_F232_A0.7441.00
501_R531_I0.7431.00
286_V289_L0.7421.00
267_L272_V0.7411.00
487_V494_V0.7411.00
61_N64_Y0.7391.00
435_M440_L0.7381.00
44_R48_P0.7381.00
66_T69_E0.7361.00
84_G91_I0.7361.00
261_I474_P0.7351.00
5_Y253_E0.7341.00
323_Q327_G0.7341.00
327_G331_L0.7341.00
145_V149_T0.7331.00
297_Q475_C0.7331.00
265_Q399_I0.7311.00
286_V494_V0.7311.00
20_R528_A0.7301.00
202_R206_D0.7271.00
20_R23_E0.7271.00
387_G471_A0.7251.00
224_H286_V0.7251.00
102_L105_D0.7251.00
139_H175_D0.7251.00
175_D178_G0.7241.00
162_I172_R0.7231.00
165_G184_F0.7221.00
129_E139_H0.7211.00
278_L285_L0.7201.00
114_E482_Y0.7191.00
79_C412_F0.7191.00
310_E442_Q0.7181.00
253_E531_I0.7171.00
36_G218_T0.7171.00
111_P115_N0.7171.00
31_L205_L0.7171.00
267_L478_C0.7161.00
134_G141_G0.7161.00
18_A31_L0.7140.99
462_E465_R0.7130.99
426_D430_I0.7120.99
480_M488_V0.7120.99
131_R188_D0.7120.99
309_K441_D0.7110.99
263_S504_D0.7110.99
24_D211_R0.7080.99
154_V159_E0.7050.99
165_G170_Y0.7040.99
82_G91_I0.7020.99
341_N344_E0.7010.99
457_D460_L0.7010.99
408_P412_F0.7010.99
44_R50_A0.6980.99
7_I255_L0.6980.99
295_N476_G0.6980.99
340_S344_E0.6970.99
475_C505_A0.6960.99
479_K486_S0.6960.99
390_R513_T0.6960.99
165_G434_I0.6950.99
330_W334_G0.6930.99
166_V184_F0.6900.99
58_K61_N0.6880.99
366_P370_N0.6880.99
123_P529_D0.6870.99
508_M520_T0.6850.99
298_D414_Y0.6850.99
272_V286_V0.6850.99
291_G487_V0.6850.99
238_L241_D0.6850.99
139_H147_V0.6830.99
361_Q366_P0.6800.99
117_S123_P0.6800.99
421_W464_V0.6800.99
415_M421_W0.6800.99
46_Q196_R0.6790.99
358_P361_Q0.6780.99
223_D266_I0.6780.99
72_M77_M0.6780.99
3_F28_S0.6780.99
199_S202_R0.6760.99
138_Y179_Y0.6750.99
508_M516_L0.6730.99
135_E139_H0.6730.99
64_Y410_I0.6730.99
429_R432_R0.6690.99
15_N205_L0.6690.99
428_I464_V0.6690.99
66_T412_F0.6690.99
96_Y128_A0.6690.99
124_Y128_A0.6680.99
201_A205_L0.6680.99
105_D108_A0.6680.99
352_R426_D0.6670.99
324_P327_G0.6670.99
388_S423_E0.6670.99
307_E379_E0.6660.99
19_T211_R0.6650.99
46_Q202_R0.6650.99
100_N181_Q0.6640.99
322_N325_K0.6630.99
336_G341_N0.6620.99
182_E350_R0.6600.99
154_V158_F0.6600.99
209_K212_P0.6590.99
280_E398_R0.6590.99
350_R354_E0.6590.99
436_H441_D0.6570.99
65_E78_E0.6570.99
307_E445_G0.6570.99
178_G181_Q0.6570.99
67_E70_P0.6550.99
102_L356_A0.6540.99
164_A439_A0.6540.99
118_Y179_Y0.6540.99
140_G143_G0.6520.99
234_G247_R0.6510.99
457_D461_D0.6510.99
149_T188_D0.6490.99
23_E211_R0.6480.99
296_L474_P0.6470.99
264_P292_V0.6470.99
104_L512_I0.6470.99
142_D146_S0.6460.99
386_V431_T0.6450.99
265_Q281_F0.6440.99
287_H495_H0.6440.99
163_E172_R0.6420.99
26_N29_V0.6420.99
388_S391_S0.6410.99
43_F47_M0.6400.99
299_H515_N0.6400.99
220_A248_A0.6390.99
108_A114_E0.6380.99
121_C125_Y0.6370.99
29_V214_L0.6370.99
530_M534_Q0.6370.99
162_I184_F0.6370.99
489_D495_H0.6350.99
104_L121_C0.6350.99
113_L120_D0.6340.99
136_N139_H0.6340.99
508_M512_I0.6320.99
143_G146_S0.6320.99
281_F285_L0.6320.99
274_N285_L0.6320.99
492_G523_I0.6310.99
48_P51_L0.6310.99
145_V148_T0.6310.99
139_H145_V0.6300.99
187_M191_V0.6290.99
224_H270_S0.6290.99
62_W83_K0.6270.99
5_Y21_L0.6270.99
335_T339_A0.6270.99
351_S355_F0.6260.99
57_G61_N0.6260.99
283_I399_I0.6250.99
7_I14_G0.6240.99
425_R460_L0.6240.99
326_I330_W0.6210.99
223_D404_P0.6200.99
142_D145_V0.6200.99
44_R47_M0.6180.99
351_S360_I0.6180.99
292_V478_C0.6170.99
393_S416_S0.6150.98
220_A246_T0.6150.98
145_V204_Y0.6140.98
54_P58_K0.6140.98
42_D60_Y0.6130.98
141_G146_S0.6120.98
274_N290_P0.6120.98
100_N513_T0.6120.98
94_M191_V0.6100.98
299_H473_H0.6100.98
268_Q397_V0.6100.98
143_G147_V0.6100.98
458_E462_E0.6100.98
66_T70_P0.6090.98
302_M463_F0.6070.98
250_A500_L0.6060.98
156_P160_A0.6060.98
396_H409_A0.6050.98
322_N326_I0.6050.98
83_K221_M0.6050.98
108_A120_D0.6040.98
79_C474_P0.6040.98
481_G485_M0.6040.98
67_E76_R0.6030.98
205_L208_A0.6020.98
108_A112_G0.6020.98
54_P57_G0.6000.98
7_I29_V0.5990.98
360_I427_A0.5970.98
336_G340_S0.5970.98
340_S343_F0.5970.98
184_F187_M0.5960.98
221_M265_Q0.5950.98
328_A333_G0.5950.98
171_P180_Q0.5940.98
166_V171_P0.5940.98
159_E186_P0.5920.98
105_D119_L0.5910.98
107_W508_M0.5900.98
302_M424_F0.5900.98
23_E525_E0.5890.98
131_R149_T0.5870.98
434_I437_Q0.5870.98
482_Y485_M0.5850.98
478_C488_V0.5840.98
323_Q328_A0.5840.98
429_R460_L0.5830.98
168_A433_E0.5830.98
39_Y43_F0.5820.98
233_V247_R0.5820.98
422_Q457_D0.5800.98
276_E280_E0.5800.98
289_L497_L0.5790.98
305_Q383_Q0.5790.98
69_E72_M0.5780.98
105_D118_Y0.5770.98
73_N465_R0.5770.98
526_K529_D0.5760.98
439_A442_Q0.5760.98
45_T48_P0.5760.98
104_L107_W0.5750.98
7_I22_T0.5750.98
105_D117_S0.5720.98
367_V370_N0.5720.98
174_D178_G0.5710.98
407_H410_I0.5710.98
38_D46_Q0.5710.98
141_G144_P0.5700.98
456_T460_L0.5700.98
427_A431_T0.5680.97
118_Y121_C0.5680.97
366_P369_I0.5670.97
115_N490_G0.5660.97
301_E471_A0.5650.97
24_D213_N0.5650.97
530_M533_G0.5640.97
102_L357_W0.5630.97
10_A13_A0.5630.97
39_Y42_D0.5630.97
482_Y486_S0.5620.97
256_L266_I0.5620.97
135_E138_Y0.5620.97
158_F162_I0.5620.97
325_K330_W0.5620.97
147_V150_S0.5590.97
232_A497_L0.5590.97
262_A266_I0.5590.97
50_A54_P0.5580.97
45_T60_Y0.5580.97
368_A372_N0.5580.97
295_N477_T0.5580.97
56_Q59_R0.5580.97
137_D141_G0.5570.97
304_L428_I0.5570.97
358_P363_H0.5560.97
22_T208_A0.5560.97
346_G349_I0.5550.97
321_W324_P0.5550.97
181_Q191_V0.5540.97
141_G147_V0.5530.97
14_G257_C0.5530.97
302_M464_V0.5500.97
7_I19_T0.5500.97
45_T90_L0.5500.97
511_I516_L0.5480.97
400_K407_H0.5480.97
417_H421_W0.5470.97
320_W323_Q0.5460.97
294_E393_S0.5460.97
122_L138_Y0.5460.97
153_G156_P0.5450.97
281_F401_S0.5440.97
333_G339_A0.5440.97
147_V151_K0.5430.97
328_A334_G0.5430.97
281_F284_P0.5420.97
476_G479_K0.5410.97
43_F50_A0.5410.97
155_N158_F0.5410.97
365_L368_A0.5410.97
279_A284_P0.5410.97
12_S200_T0.5380.97
475_C508_M0.5380.97
61_N91_I0.5380.97
291_G495_H0.5380.97
227_F287_H0.5370.96
68_P71_F0.5350.96
240_G243_T0.5340.96
145_V190_T0.5340.96
291_G294_E0.5330.96
139_H144_P0.5330.96
4_D252_K0.5330.96
131_R139_H0.5320.96
277_L288_E0.5320.96
67_E71_F0.5310.96
503_V528_A0.5310.96
181_Q196_R0.5310.96
260_A474_P0.5300.96
127_K528_A0.5300.96
42_D45_T0.5300.96
23_E127_K0.5290.96
328_A331_L0.5290.96
113_L116_W0.5280.96
433_E437_Q0.5260.96
283_I290_P0.5260.96
79_C414_Y0.5260.96
19_T144_P0.5260.96
222_T258_A0.5250.96
115_N526_K0.5250.96
106_N390_R0.5250.96
95_C187_M0.5230.96
324_P332_F0.5230.96
322_N328_A0.5230.96
249_T252_K0.5230.96
98_R126_R0.5220.96
403_D408_P0.5210.96
203_G207_Q0.5210.96
164_A167_Q0.5190.96
359_N362_Y0.5180.96
17_L527_I0.5170.96
239_E246_T0.5160.96
359_N364_F0.5150.96
330_W333_G0.5150.96
502_V506_S0.5150.96
269_R399_I0.5130.95
421_W424_F0.5120.95
481_G495_H0.5120.95
59_R63_A0.5120.95
261_I265_Q0.5120.95
361_Q365_L0.5100.95
492_G503_V0.5100.95
272_V292_V0.5090.95
208_A214_L0.5070.95
330_W336_G0.5060.95
123_P526_K0.5060.95
272_V287_H0.5050.95
210_S213_N0.5050.95
238_L242_S0.5050.95
232_A499_G0.5040.95
308_C382_F0.5030.95
358_P366_P0.5020.95
297_Q476_G0.5020.95
502_V507_I0.5020.95
5_Y532_R0.5010.95
258_A263_S0.5010.95
447_E450_P0.5000.95
12_S31_L0.5000.95
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3fimB 1 0.955 100 0.214 Contact Map
4h7uA 1 0.946 100 0.221 Contact Map
4udqA 1 0.8885 100 0.246 Contact Map
1gpeA 2 0.9496 100 0.247 Contact Map
2jbvA 1 0.9119 100 0.25 Contact Map
3qvpA 1 0.9514 100 0.252 Contact Map
4ha6A 2 0.9029 100 0.257 Contact Map
3q9tA 2 0.9442 100 0.258 Contact Map
4z24A 2 0.9371 100 0.315 Contact Map
1ju2A 1 0.8615 100 0.327 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0135 seconds.