PANF - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

PANF - Sodium/pantothenate symporter

UniProt:	P16256	Sequences: MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10685
Length:	483 (460)
Sequences:	11524 (7399)
Seq/√Len:	345.0

ECOLI - PANF YIDK ACTP PUTP
BACSU - OPUE YWCA YODF YCGO YHJB
HALSA - Q9HP63 Q9HR16
SULSO - Q7LX83 Q97VX6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
431_V	462_A	6.085	1.00
362_N	365_R	4.203	1.00
265_D	268_A	3.943	1.00
420_A	463_F	3.907	1.00
18_G	22_Y	3.653	1.00
357_P	365_R	3.464	1.00
431_V	458_L	3.312	1.00
201_I	205_H	3.296	1.00
170_A	378_G	3.216	1.00
421_N	470_G	3.205	1.00
464_L	468_R	3.176	1.00
428_A	463_F	3.065	1.00
203_V	293_L	3.042	1.00
212_N	215_Q	3.040	1.00
427_S	466_G	3.036	1.00
435_L	458_L	3.014	1.00
462_A	466_G	2.963	1.00
364_T	368_R	2.946	1.00
466_G	470_G	2.762	1.00
423_K	470_G	2.744	1.00
368_R	372_V	2.722	1.00
413_L	463_F	2.677	1.00
157_P	160_T	2.624	1.00
166_G	382_L	2.581	1.00
115_F	124_V	2.554	1.00
424_G	467_N	2.531	1.00
352_Y	360_M	2.511	1.00
372_V	376_V	2.356	1.00
294_G	307_V	2.353	1.00
178_F	262_S	2.284	1.00
43_M	182_V	2.278	1.00
11_A	15_V	2.270	1.00
264_K	268_A	2.262	1.00
215_Q	219_T	2.218	1.00
427_S	462_A	2.182	1.00
417_W	420_A	2.154	1.00
212_N	216_T	2.139	1.00
34_N	41_R	2.131	1.00
423_K	427_S	2.101	1.00
410_P	425_A	2.096	1.00
67_G	305_D	2.076	1.00
12_Y	16_V	2.062	1.00
357_P	360_M	2.050	1.00
14_V	18_G	2.034	1.00
434_V	438_V	2.009	1.00
113_M	414_G	2.007	1.00
122_L	426_L	1.995	1.00
421_N	424_G	1.993	1.00
379_A	383_L	1.976	1.00
163_L	167_I	1.970	1.00
35_E	40_S	1.965	1.00
349_K	353_L	1.954	1.00
118_Y	420_A	1.950	1.00
197_V	201_I	1.950	1.00
421_N	467_N	1.918	1.00
267_K	271_R	1.904	1.00
424_G	466_G	1.902	1.00
268_A	271_R	1.902	1.00
419_R	471_T	1.867	1.00
368_R	371_A	1.867	1.00
47_V	186_T	1.815	1.00
298_I	314_K	1.814	1.00
461_L	465_V	1.810	1.00
413_L	460_L	1.806	1.00
59_A	145_G	1.800	1.00
215_Q	218_Q	1.795	1.00
38_L	41_R	1.794	1.00
195_G	327_A	1.786	1.00
310_T	314_K	1.782	1.00
107_A	116_A	1.765	1.00
353_L	366_L	1.751	1.00
267_K	270_H	1.731	1.00
169_I	336_I	1.715	1.00
417_W	468_R	1.713	1.00
352_Y	369_M	1.699	1.00
417_W	464_L	1.697	1.00
119_Q	122_L	1.672	1.00
211_S	215_Q	1.672	1.00
176_G	180_A	1.662	1.00
6_I	10_V	1.661	1.00
365_R	368_R	1.659	1.00
419_R	468_R	1.629	1.00
347_I	351_L	1.628	1.00
424_G	428_A	1.625	1.00
45_G	268_A	1.621	1.00
216_T	219_T	1.609	1.00
427_S	431_V	1.580	1.00
167_I	171_L	1.577	1.00
19_I	187_M	1.558	1.00
322_G	326_A	1.556	1.00
50_M	186_T	1.554	1.00
431_V	435_L	1.550	1.00
340_L	378_G	1.533	1.00
352_Y	365_R	1.526	1.00
218_Q	221_D	1.513	1.00
48_L	263_Y	1.506	1.00
147_A	162_L	1.473	1.00
227_P	230_A	1.466	1.00
347_I	373_I	1.447	1.00
94_L	412_V	1.432	1.00
207_A	213_A	1.424	1.00
120_S	422_A	1.422	1.00
225_V	229_G	1.413	1.00
119_Q	422_A	1.412	1.00
112_D	349_K	1.407	1.00
112_D	350_D	1.400	1.00
222_P	226_T	1.395	1.00
343_S	377_L	1.389	1.00
224_L	227_P	1.385	1.00
226_T	229_G	1.381	1.00
148_R	303_V	1.376	1.00
365_R	369_M	1.368	1.00
162_L	382_L	1.359	1.00
130_S	433_G	1.358	1.00
10_V	14_V	1.355	1.00
15_V	19_I	1.329	1.00
185_D	259_R	1.329	1.00
169_I	333_M	1.322	1.00
352_Y	357_P	1.320	1.00
160_T	164_I	1.299	1.00
25_R	28_S	1.299	1.00
16_V	20_S	1.298	1.00
37_F	370_S	1.286	1.00
457_L	461_L	1.279	1.00
69_A	76_W	1.269	1.00
210_L	214_V	1.264	1.00
367_K	371_A	1.264	1.00
356_R	359_Q	1.253	1.00
360_M	365_R	1.251	1.00
232_D	235_S	1.243	1.00
117_R	414_G	1.240	1.00
115_F	120_S	1.229	1.00
16_V	187_M	1.223	1.00
421_N	471_T	1.223	1.00
347_I	352_Y	1.222	1.00
452_I	456_L	1.220	1.00
7_L	11_A	1.219	1.00
348_I	370_S	1.217	1.00
113_M	117_R	1.216	1.00
160_T	163_L	1.213	1.00
423_K	466_G	1.212	1.00
438_V	442_L	1.212	1.00
395_L	399_A	1.212	1.00
163_L	382_L	1.210	1.00
159_E	386_W	1.209	1.00
435_L	462_A	1.206	1.00
123_L	426_L	1.206	1.00
159_E	163_L	1.203	1.00
126_L	426_L	1.195	1.00
184_N	337_N	1.195	1.00
89_L	93_I	1.194	1.00
95_G	99_A	1.189	1.00
301_L	304_P	1.189	1.00
22_Y	26_K	1.184	1.00
146_G	165_F	1.182	1.00
458_L	462_A	1.182	1.00
49_A	275_I	1.182	1.00
115_F	354_N	1.177	1.00
166_G	378_G	1.176	1.00
190_L	194_I	1.167	1.00
129_L	133_V	1.160	1.00
356_R	360_M	1.157	1.00
15_V	187_M	1.156	1.00
143_F	166_G	1.155	1.00
214_V	218_Q	1.154	1.00
457_L	460_L	1.146	1.00
373_I	376_V	1.144	1.00
5_V	319_F	1.141	1.00
127_A	429_M	1.140	1.00
151_E	158_Y	1.139	1.00
194_I	198_V	1.138	1.00
185_D	337_N	1.138	1.00
216_T	296_A	1.136	1.00
15_V	18_G	1.131	1.00
109_T	345_A	1.121	1.00
460_L	464_L	1.118	1.00
39_G	43_M	1.116	1.00
360_M	366_L	1.116	1.00
419_R	472_S	1.112	1.00
352_Y	358_D	1.110	1.00
422_A	426_L	1.110	1.00
391_M	394_W	1.103	1.00
55_T	338_A	1.097	1.00
312_M	324_F	1.095	1.00
27_R	35_E	1.093	1.00
123_L	425_A	1.089	1.00
51_T	338_A	1.089	1.00
143_F	162_L	1.087	1.00
206_A	297_V	1.077	1.00
223_Q	226_T	1.074	1.00
39_G	178_F	1.071	1.00
53_T	279_V	1.070	1.00
363_E	366_L	1.067	1.00
420_A	467_N	1.067	1.00
124_V	350_D	1.058	1.00
122_L	126_L	1.058	1.00
410_P	429_M	1.057	1.00
7_L	10_V	1.056	1.00
174_A	375_L	1.056	1.00
45_G	49_A	1.055	1.00
156_I	161_G	1.050	1.00
129_L	351_L	1.049	1.00
12_Y	20_S	1.047	1.00
17_F	20_S	1.041	1.00
352_Y	356_R	1.041	1.00
454_P	457_L	1.040	1.00
370_S	374_T	1.031	1.00
77_V	81_M	1.028	1.00
348_I	369_M	1.027	1.00
225_V	228_Q	1.026	1.00
71_K	304_P	1.019	1.00
18_G	21_V	1.017	1.00
104_R	266_S	1.017	1.00
421_N	466_G	1.016	1.00
202_G	206_A	1.012	1.00
211_S	214_V	1.010	1.00
105_Y	116_A	1.010	1.00
385_A	388_P	1.010	1.00
420_A	424_G	1.004	1.00
93_I	97_K	1.002	1.00
209_G	212_N	0.999	1.00
413_L	420_A	0.998	1.00
428_A	459_S	0.996	1.00
172_Y	337_N	0.992	1.00
139_M	381_L	0.990	1.00
419_R	473_V	0.990	1.00
310_T	313_V	0.989	1.00
169_I	337_N	0.987	1.00
134_A	402_G	0.984	1.00
214_V	217_L	0.984	1.00
293_L	297_V	0.982	1.00
369_M	373_I	0.981	1.00
462_A	465_V	0.981	1.00
172_Y	333_M	0.980	1.00
231_D	234_L	0.978	1.00
230_A	235_S	0.975	1.00
34_N	106_N	0.974	1.00
413_L	464_L	0.971	1.00
198_V	202_G	0.965	1.00
140_T	384_A	0.964	1.00
409_W	460_L	0.963	1.00
122_L	422_A	0.961	1.00
17_F	21_V	0.960	1.00
218_Q	222_P	0.959	1.00
309_P	312_M	0.954	1.00
231_D	235_S	0.952	1.00
37_F	345_A	0.950	1.00
132_L	347_I	0.949	1.00
254_P	342_Q	0.944	1.00
82_I	86_A	0.943	1.00
198_V	320_A	0.942	1.00
222_P	227_P	0.938	1.00
12_Y	333_M	0.937	1.00
406_V	459_S	0.937	1.00
114_L	127_A	0.937	1.00
130_S	429_M	0.934	1.00
459_S	463_F	0.934	1.00
188_Q	337_N	0.934	1.00
303_V	306_L	0.934	1.00
126_L	429_M	0.930	1.00
96_K	270_H	0.928	1.00
45_G	271_R	0.927	1.00
393_I	397_L	0.927	1.00
118_Y	463_F	0.926	1.00
59_A	332_I	0.920	1.00
236_P	239_M	0.918	1.00
379_A	382_L	0.914	1.00
51_T	54_A	0.913	1.00
414_G	425_A	0.909	1.00
125_W	355_I	0.906	1.00
79_L	82_I	0.906	1.00
398_L	440_A	0.903	1.00
213_A	217_L	0.902	1.00
118_Y	414_G	0.902	1.00
423_K	469_F	0.899	1.00
216_T	220_I	0.898	1.00
156_I	164_I	0.898	1.00
184_N	188_Q	0.890	1.00
396_N	400_F	0.889	1.00
392_I	396_N	0.888	1.00
68_A	72_Y	0.887	1.00
22_Y	25_R	0.886	1.00
344_S	348_I	0.883	1.00
249_G	254_P	0.882	1.00
47_V	182_V	0.881	1.00
254_P	258_V	0.880	1.00
207_A	212_N	0.880	1.00
245_L	254_P	0.879	1.00
341_L	344_S	0.878	1.00
347_I	377_L	0.878	1.00
263_Y	269_V	0.876	1.00
316_L	320_A	0.869	1.00
9_L	13_L	0.867	1.00
213_A	293_L	0.864	1.00
453_V	457_L	0.863	1.00
185_D	338_A	0.862	1.00
50_M	189_G	0.861	1.00
439_L	454_P	0.861	1.00
222_P	225_V	0.860	1.00
23_A	27_R	0.860	1.00
432_G	459_S	0.855	1.00
383_L	387_K	0.854	1.00
430_I	434_V	0.853	1.00
84_L	281_A	0.852	1.00
55_T	185_D	0.847	1.00
312_M	321_A	0.847	1.00
219_T	222_P	0.847	1.00
200_L	286_G	0.844	1.00
69_A	292_A	0.843	1.00
172_Y	188_Q	0.843	1.00
424_G	427_S	0.841	1.00
458_L	461_L	0.840	1.00
206_A	315_V	0.839	1.00
44_G	268_A	0.838	1.00
334_S	337_N	0.838	1.00
12_Y	330_A	0.837	1.00
428_A	432_G	0.836	1.00
421_N	472_S	0.835	1.00
181_S	184_N	0.835	1.00
84_L	277_T	0.833	1.00
306_L	310_T	0.832	1.00
417_W	467_N	0.831	1.00
51_T	259_R	0.830	1.00
294_G	311_L	0.828	1.00
117_R	417_W	0.827	1.00
249_G	253_L	0.824	1.00
111_N	127_A	0.822	1.00
99_A	266_S	0.822	1.00
465_V	469_F	0.821	1.00
74_L	292_A	0.821	1.00
456_L	459_S	0.820	1.00
445_Q	448_G	0.818	1.00
410_P	459_S	0.817	1.00
120_S	124_V	0.816	1.00
13_L	16_V	0.814	1.00
21_V	25_R	0.814	1.00
208_G	212_N	0.814	1.00
465_V	468_R	0.813	1.00
147_A	158_Y	0.810	1.00
51_T	182_V	0.809	1.00
70_Y	300_D	0.808	1.00
120_S	123_L	0.807	1.00
432_G	436_Y	0.806	1.00
11_A	18_G	0.805	1.00
290_A	311_L	0.805	1.00
205_H	210_L	0.805	1.00
236_P	240_T	0.803	1.00
426_L	430_I	0.801	1.00
92_G	274_I	0.797	1.00
158_Y	162_L	0.794	1.00
245_L	253_L	0.793	1.00
274_I	278_I	0.791	1.00
20_S	24_M	0.789	1.00
132_L	343_S	0.789	1.00
16_V	24_M	0.788	1.00
203_V	206_A	0.787	1.00
172_Y	334_S	0.787	1.00
25_R	29_T	0.785	1.00
460_L	463_F	0.785	1.00
376_V	380_L	0.783	1.00
366_L	370_S	0.781	1.00
183_L	186_T	0.781	1.00
374_T	378_G	0.779	1.00
225_V	230_A	0.778	1.00
151_E	155_G	0.775	1.00
202_G	205_H	0.775	1.00
196_T	287_M	0.775	1.00
23_A	183_L	0.768	1.00
26_K	29_T	0.768	1.00
212_N	296_A	0.768	1.00
17_F	171_L	0.767	1.00
51_T	55_T	0.766	1.00
238_F	242_F	0.766	1.00
438_V	441_T	0.765	1.00
45_G	275_I	0.765	1.00
5_V	321_A	0.764	1.00
451_P	455_S	0.763	1.00
319_F	323_I	0.763	1.00
95_G	98_F	0.761	1.00
263_Y	268_A	0.757	1.00
20_S	23_A	0.752	1.00
204_V	213_A	0.752	1.00
278_I	282_I	0.751	1.00
126_L	430_I	0.748	1.00
114_L	123_L	0.747	1.00
21_V	175_F	0.747	1.00
193_L	197_V	0.746	1.00
24_M	27_R	0.744	1.00
161_G	165_F	0.744	1.00
79_L	83_Q	0.743	1.00
188_Q	330_A	0.741	1.00
207_A	296_A	0.740	1.00
142_Q	335_T	0.737	0.99
39_G	262_S	0.737	0.99
230_A	233_I	0.737	0.99
356_R	365_R	0.736	0.99
22_Y	183_L	0.736	0.99
435_L	438_V	0.735	0.99
301_L	310_T	0.734	0.99
423_K	471_T	0.733	0.99
58_S	138_A	0.730	0.99
413_L	417_W	0.729	0.99
417_W	421_N	0.728	0.99
464_L	467_N	0.727	0.99
21_V	24_M	0.727	0.99
112_D	116_A	0.724	0.99
397_L	400_F	0.722	0.99
417_W	424_G	0.721	0.99
9_L	329_M	0.720	0.99
352_Y	355_I	0.717	0.99
62_F	196_T	0.716	0.99
109_T	350_D	0.716	0.99
148_R	151_E	0.715	0.99
204_V	209_G	0.715	0.99
204_V	289_L	0.714	0.99
188_Q	334_S	0.713	0.99
163_L	379_A	0.712	0.99
54_A	259_R	0.708	0.99
61_S	284_M	0.707	0.99
70_Y	301_L	0.705	0.99
181_S	338_A	0.705	0.99
122_L	125_W	0.705	0.99
146_G	332_I	0.705	0.99
248_F	408_L	0.703	0.99
199_L	203_V	0.702	0.99
199_L	308_I	0.702	0.99
399_A	402_G	0.701	0.99
8_P	322_G	0.699	0.99
36_Y	374_T	0.699	0.99
188_Q	335_T	0.697	0.99
217_L	221_D	0.696	0.99
463_F	466_G	0.693	0.99
466_G	469_F	0.692	0.99
150_L	161_G	0.691	0.99
435_L	439_L	0.690	0.99
221_D	224_L	0.689	0.99
8_P	319_F	0.689	0.99
95_G	269_V	0.688	0.99
469_F	472_S	0.688	0.99
295_R	299_P	0.687	0.99
125_W	129_L	0.684	0.99
311_L	315_V	0.682	0.99
444_I	447_L	0.681	0.99
88_W	92_G	0.681	0.99
433_G	437_A	0.680	0.99
372_V	375_L	0.677	0.99
461_L	464_L	0.676	0.99
340_L	374_T	0.675	0.99
148_R	305_D	0.670	0.99
347_I	369_M	0.670	0.99
108_V	112_D	0.670	0.99
238_F	241_S	0.670	0.99
62_F	324_F	0.666	0.99
420_A	428_A	0.665	0.99
385_A	389_P	0.663	0.99
178_F	182_V	0.663	0.99
197_V	200_L	0.662	0.99
344_S	374_T	0.662	0.99
198_V	201_I	0.659	0.99
220_I	295_R	0.659	0.99
162_L	385_A	0.657	0.99
251_I	254_P	0.657	0.99
240_T	243_W	0.656	0.99
46_I	50_M	0.656	0.99
217_L	220_I	0.654	0.99
24_M	175_F	0.653	0.99
34_N	363_E	0.652	0.99
427_S	430_I	0.650	0.99
44_G	47_V	0.650	0.99
43_M	48_L	0.649	0.99
431_V	466_G	0.649	0.99
78_L	82_I	0.649	0.99
142_Q	336_I	0.649	0.99
306_L	309_P	0.648	0.99
188_Q	333_M	0.647	0.99
449_F	453_V	0.647	0.99
208_G	211_S	0.646	0.99
339_Q	342_Q	0.645	0.99
419_R	422_A	0.645	0.99
5_V	8_P	0.644	0.99
123_L	422_A	0.644	0.99
170_A	375_L	0.644	0.99
355_I	358_D	0.643	0.99
70_Y	307_V	0.643	0.99
359_Q	365_R	0.641	0.99
143_F	180_A	0.641	0.99
7_L	14_V	0.639	0.99
213_A	216_T	0.639	0.99
118_Y	425_A	0.638	0.99
144_I	148_R	0.637	0.99
97_K	416_Y	0.637	0.99
27_R	367_K	0.636	0.99
125_W	128_S	0.636	0.99
48_L	51_T	0.635	0.98
288_H	292_A	0.634	0.98
56_Y	400_F	0.634	0.98
277_T	281_A	0.633	0.98
26_K	179_R	0.633	0.98
393_I	396_N	0.632	0.98
244_V	456_L	0.631	0.98
352_Y	359_Q	0.630	0.98
409_W	463_F	0.630	0.98
335_T	339_Q	0.629	0.98
348_I	352_Y	0.628	0.98
172_Y	180_A	0.628	0.98
206_A	210_L	0.627	0.98
170_A	174_A	0.627	0.98
96_K	266_S	0.627	0.98
375_L	379_A	0.626	0.98
317_P	320_A	0.626	0.98
49_A	53_T	0.624	0.98
24_M	28_S	0.623	0.98
425_A	432_G	0.623	0.98
224_L	228_Q	0.621	0.98
295_R	307_V	0.621	0.98
138_A	253_L	0.620	0.98
348_I	366_L	0.620	0.98
290_A	308_I	0.619	0.98
357_P	362_N	0.619	0.98
8_P	326_A	0.618	0.98
131_L	346_T	0.618	0.98
213_A	296_A	0.617	0.98
229_G	232_D	0.617	0.98
138_A	339_Q	0.615	0.98
436_Y	455_S	0.615	0.98
163_L	386_W	0.615	0.98
46_I	186_T	0.614	0.98
68_A	71_K	0.613	0.98
111_N	131_L	0.613	0.98
344_S	373_I	0.613	0.98
297_V	315_V	0.613	0.98
86_A	90_S	0.612	0.98
437_A	441_T	0.612	0.98
271_R	275_I	0.612	0.98
17_F	24_M	0.611	0.98
221_D	295_R	0.611	0.98
440_A	451_P	0.610	0.98
36_Y	371_A	0.609	0.98
138_A	255_H	0.604	0.98
353_L	363_E	0.602	0.98
392_I	395_L	0.602	0.98
296_A	299_P	0.601	0.98
147_A	161_G	0.601	0.98
344_S	370_S	0.600	0.98
35_E	179_R	0.600	0.98
450_H	454_P	0.600	0.98
173_T	337_N	0.600	0.98
318_P	321_A	0.599	0.98
88_W	273_I	0.599	0.98
79_L	242_F	0.598	0.98
470_G	473_V	0.598	0.98
54_A	189_G	0.596	0.98
358_D	362_N	0.595	0.98
26_K	42_S	0.594	0.98
93_I	96_K	0.594	0.98
33_L	37_F	0.593	0.98
200_L	289_L	0.593	0.98
118_Y	413_L	0.593	0.98
90_S	95_G	0.593	0.98
74_L	77_V	0.592	0.98
54_A	188_Q	0.592	0.98
67_G	304_P	0.591	0.98
239_M	242_F	0.589	0.98
185_D	334_S	0.588	0.98
120_S	354_N	0.588	0.98
88_W	274_I	0.586	0.97
245_L	249_G	0.584	0.97
204_V	210_L	0.583	0.97
264_K	267_K	0.583	0.97
137_G	399_A	0.582	0.97
179_R	183_L	0.582	0.97
207_A	297_V	0.581	0.97
249_G	400_F	0.581	0.97
390_E	394_W	0.581	0.97
181_S	341_L	0.580	0.97
360_M	369_M	0.580	0.97
58_S	62_F	0.579	0.97
16_V	23_A	0.579	0.97
392_I	397_L	0.579	0.97
60_S	396_N	0.578	0.97
468_R	471_T	0.577	0.97
95_G	266_S	0.576	0.97
53_T	283_L	0.576	0.97
380_L	383_L	0.576	0.97
397_L	401_G	0.576	0.97
455_S	459_S	0.575	0.97
110_L	411_L	0.573	0.97
274_I	277_T	0.572	0.97
152_T	306_L	0.571	0.97
207_A	216_T	0.571	0.97
65_G	69_A	0.567	0.97
51_T	185_D	0.566	0.97
80_A	87_V	0.566	0.97
139_M	336_I	0.565	0.97
304_P	307_V	0.565	0.97
282_I	286_G	0.565	0.97
55_T	255_H	0.565	0.97
19_I	23_A	0.563	0.97
114_L	410_P	0.563	0.97
396_N	404_E	0.563	0.97
29_T	35_E	0.561	0.97
90_S	99_A	0.561	0.97
359_Q	362_N	0.561	0.97
136_V	384_A	0.561	0.97
130_S	406_V	0.559	0.97
456_L	460_L	0.559	0.97
226_T	230_A	0.558	0.97
148_R	152_T	0.558	0.97
91_L	95_G	0.558	0.97
163_L	166_G	0.558	0.97
64_G	138_A	0.556	0.97
194_I	197_V	0.556	0.97
442_L	446_Y	0.556	0.97
33_L	366_L	0.555	0.97
199_L	324_F	0.554	0.96
56_Y	83_Q	0.553	0.96
80_A	83_Q	0.552	0.96
47_V	183_L	0.552	0.96
239_M	243_W	0.552	0.96
382_L	385_A	0.551	0.96
5_V	322_G	0.549	0.96
353_L	356_R	0.549	0.96
13_L	20_S	0.549	0.96
271_R	274_I	0.549	0.96
280_V	284_M	0.549	0.96
196_T	286_G	0.546	0.96
62_F	67_G	0.546	0.96
408_L	412_V	0.546	0.96
27_R	179_R	0.545	0.96
151_E	157_P	0.545	0.96
421_N	425_A	0.545	0.96
405_A	409_W	0.543	0.96
82_I	85_P	0.542	0.96
55_T	173_T	0.542	0.96
162_L	166_G	0.542	0.96
223_Q	233_I	0.542	0.96
435_L	455_S	0.541	0.96
260_C	273_I	0.538	0.96
108_V	349_K	0.537	0.96
223_Q	227_P	0.536	0.96
283_L	287_M	0.535	0.96
119_Q	123_L	0.530	0.95
157_P	161_G	0.530	0.95
429_M	432_G	0.528	0.95
43_M	262_S	0.528	0.95
53_T	189_G	0.528	0.95
348_I	373_I	0.528	0.95
90_S	93_I	0.528	0.95
98_F	257_A	0.528	0.95
371_A	374_T	0.527	0.95
75_G	78_L	0.526	0.95
419_R	464_L	0.526	0.95
326_A	330_A	0.526	0.95
298_I	310_T	0.526	0.95
413_L	467_N	0.525	0.95
333_M	337_N	0.524	0.95
124_V	354_N	0.524	0.95
424_G	470_G	0.523	0.95
247_C	254_P	0.522	0.95
23_A	179_R	0.521	0.95
225_V	235_S	0.521	0.95
228_Q	231_D	0.520	0.95
79_L	86_A	0.520	0.95
386_W	389_P	0.519	0.95
131_L	407_F	0.517	0.95
182_V	185_D	0.517	0.95
152_T	310_T	0.513	0.95
144_I	158_Y	0.513	0.95
266_S	270_H	0.512	0.95
211_S	218_Q	0.512	0.95
294_G	298_I	0.511	0.95
259_R	338_A	0.510	0.94
34_N	108_V	0.509	0.94
107_A	113_M	0.509	0.94
316_L	324_F	0.507	0.94
353_L	358_D	0.507	0.94
138_A	142_Q	0.507	0.94
424_G	462_A	0.506	0.94
224_L	229_G	0.506	0.94
13_L	17_F	0.505	0.94
205_H	208_G	0.505	0.94
156_I	160_T	0.504	0.94
222_P	229_G	0.503	0.94
401_G	436_Y	0.503	0.94
222_P	228_Q	0.502	0.94
53_T	57_I	0.502	0.94
419_R	467_N	0.502	0.94
162_L	165_F	0.502	0.94
196_T	283_L	0.500	0.94
339_Q	407_F	0.500	0.94

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2xq2A	2	0.94	100	0.187	Contact Map
3dh4A	3	0.8944	100	0.227	Contact Map
3l1lA	2	0.8364	99.4	0.84	Contact Map
3giaA	1	0.8613	99.2	0.856	Contact Map
4wgvA	2	0.7557	99.1	0.865	Contact Map
2jlnA	1	0.8571	98.9	0.874	Contact Map
4djkA	2	0.8116	98.6	0.888	Contact Map
4c7rA	3	0.882	97	0.92	Contact Map
2wswA	3	0.8157	96.5	0.926	Contact Map
4us3A	1	0.8095	93	0.939	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0129 seconds.