ZRAR - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

ZRAR - Transcriptional regulatory protein ZraR

UniProt:	P14375	Sequences: MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10482
Length:	441 (427)
Sequences:	10008 (7009)
Seq/√Len:	339.2

ECOLI - ZRAR GLRR NTRC ATOC NORR HYFR PRPR RTCR FHLA YGEV DHAR TYRR
BACSU - YQIR ACOR ROCR

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
288_E	293_R	3.901	1.00
170_D	313_R	3.713	1.00
214_E	224_R	3.639	1.00
417_T	427_Q	3.444	1.00
33_A	50_F	3.159	1.00
228_R	263_Q	3.044	1.00
130_E	133_A	3.012	1.00
287_A	291_A	2.964	1.00
199_A	251_V	2.935	1.00
261_E	270_I	2.650	1.00
155_I	178_V	2.629	1.00
230_V	264_R	2.565	1.00
262_V	273_V	2.553	1.00
63_D	66_A	2.519	1.00
283_R	288_E	2.496	1.00
261_E	272_S	2.489	1.00
38_G	62_M	2.488	1.00
407_K	411_L	2.463	1.00
203_E	248_M	2.454	1.00
423_E	426_R	2.449	1.00
18_C	36_N	2.446	1.00
37_S	40_Q	2.402	1.00
417_T	424_A	2.364	1.00
229_F	256_A	2.359	1.00
329_R	362_E	2.359	1.00
101_L	120_A	2.230	1.00
238_F	280_A	2.212	1.00
157_L	373_T	2.199	1.00
320_P	346_M	2.199	1.00
18_C	34_L	2.182	1.00
409_V	413_A	2.164	1.00
69_K	98_T	2.135	1.00
342_T	378_S	2.131	1.00
284_D	287_A	2.106	1.00
7_D	31_N	2.085	1.00
263_Q	270_I	2.075	1.00
36_N	40_Q	2.065	1.00
323_A	341_F	2.062	1.00
178_V	309_V	2.046	1.00
341_F	365_V	2.042	1.00
11_V	41_A	2.017	1.00
354_W	364_A	2.009	1.00
9_L	35_A	2.003	1.00
288_E	291_A	1.954	1.00
234_G	274_D	1.930	1.00
214_E	267_S	1.897	1.00
287_A	290_N	1.881	1.00
416_K	427_Q	1.880	1.00
244_D	283_R	1.879	1.00
352_Y	355_P	1.844	1.00
320_P	350_I	1.838	1.00
258_Q	362_E	1.781	1.00
229_F	237_L	1.779	1.00
406_E	438_K	1.731	1.00
144_K	321_L	1.730	1.00
316_R	320_P	1.724	1.00
39_R	61_E	1.709	1.00
188_R	274_D	1.705	1.00
168_H	308_E	1.697	1.00
156_A	185_S	1.691	1.00
257_I	277_L	1.673	1.00
52_L	117_L	1.671	1.00
324_G	346_M	1.670	1.00
22_Q	34_L	1.666	1.00
325_H	329_R	1.657	1.00
323_A	365_V	1.652	1.00
42_L	70_E	1.643	1.00
316_R	319_I	1.623	1.00
345_A	349_L	1.619	1.00
173_T	309_V	1.615	1.00
342_T	345_A	1.602	1.00
413_A	417_T	1.598	1.00
46_R	74_L	1.596	1.00
45_V	71_I	1.585	1.00
22_Q	26_R	1.580	1.00
433_K	437_A	1.574	1.00
33_A	44_Q	1.559	1.00
7_D	33_A	1.558	1.00
70_E	73_A	1.554	1.00
214_E	264_R	1.535	1.00
233_D	273_V	1.519	1.00
207_E	252_R	1.507	1.00
168_H	306_A	1.506	1.00
316_R	353_D	1.505	1.00
145_S	317_E	1.499	1.00
143_G	148_M	1.493	1.00
75_N	78_I	1.483	1.00
267_S	271_I	1.482	1.00
279_A	302_L	1.481	1.00
345_A	379_E	1.480	1.00
176_E	255_R	1.466	1.00
256_A	262_V	1.464	1.00
55_C	67_T	1.455	1.00
53_V	71_I	1.452	1.00
340_G	376_Y	1.451	1.00
344_Q	379_E	1.448	1.00
226_E	230_V	1.440	1.00
35_A	44_Q	1.435	1.00
213_H	218_F	1.430	1.00
243_G	281_T	1.425	1.00
153_S	156_A	1.397	1.00
308_E	314_Q	1.395	1.00
148_M	152_L	1.387	1.00
333_R	366_E	1.378	1.00
94_E	98_T	1.378	1.00
28_W	114_Q	1.374	1.00
348_L	379_E	1.373	1.00
163_A	366_E	1.372	1.00
322_L	326_F	1.370	1.00
81_L	116_T	1.360	1.00
158_V	305_V	1.355	1.00
346_M	350_I	1.352	1.00
225_R	268_N	1.351	1.00
233_D	274_D	1.348	1.00
59_M	62_M	1.347	1.00
55_C	82_I	1.342	1.00
130_E	134_V	1.341	1.00
412_A	416_K	1.339	1.00
327_L	341_F	1.325	1.00
191_K	234_G	1.324	1.00
377_I	382_L	1.322	1.00
70_E	74_L	1.322	1.00
285_L	294_F	1.322	1.00
162_E	333_R	1.317	1.00
352_Y	360_E	1.314	1.00
206_L	249_M	1.308	1.00
54_L	117_L	1.304	1.00
44_Q	50_F	1.297	1.00
151_L	307_I	1.291	1.00
264_R	267_S	1.286	1.00
163_A	334_N	1.286	1.00
345_A	377_I	1.279	1.00
341_F	346_M	1.267	1.00
89_V	93_V	1.264	1.00
327_L	369_V	1.260	1.00
330_F	369_V	1.260	1.00
378_S	381_E	1.260	1.00
143_G	152_L	1.256	1.00
203_E	246_S	1.253	1.00
150_H	153_S	1.240	1.00
38_G	67_T	1.237	1.00
262_V	272_S	1.237	1.00
433_K	436_L	1.236	1.00
413_A	428_L	1.234	1.00
431_T	434_T	1.232	1.00
8_I	30_Y	1.227	1.00
413_A	427_Q	1.225	1.00
37_S	61_E	1.219	1.00
91_T	103_Y	1.213	1.00
152_L	155_I	1.213	1.00
402_L	405_V	1.211	1.00
347_D	351_H	1.205	1.00
154_E	371_L	1.199	1.00
326_F	362_E	1.198	1.00
24_L	110_F	1.197	1.00
230_V	271_I	1.196	1.00
162_E	188_R	1.195	1.00
331_A	339_K	1.189	1.00
411_L	415_E	1.188	1.00
421_K	436_L	1.186	1.00
422_T	426_R	1.182	1.00
244_D	282_H	1.177	1.00
30_Y	118_E	1.171	1.00
53_V	78_I	1.171	1.00
420_N	423_E	1.170	1.00
129_A	134_V	1.169	1.00
68_L	82_I	1.165	1.00
372_L	381_E	1.164	1.00
155_I	181_A	1.160	1.00
423_E	427_Q	1.159	1.00
142_V	325_H	1.155	1.00
401_P	405_V	1.153	1.00
342_T	376_Y	1.152	1.00
339_K	375_E	1.149	1.00
38_G	59_M	1.147	1.00
12_D	18_C	1.140	1.00
431_T	437_A	1.139	1.00
193_L	235_G	1.139	1.00
286_A	290_N	1.138	1.00
68_L	80_V	1.137	1.00
141_M	152_L	1.136	1.00
383_P	386_I	1.136	1.00
320_P	323_A	1.133	1.00
151_L	309_V	1.133	1.00
409_V	428_L	1.132	1.00
180_R	195_T	1.132	1.00
420_N	432_R	1.132	1.00
170_D	311_S	1.131	1.00
57_V	91_T	1.130	1.00
213_H	217_A	1.127	1.00
324_G	328_Q	1.120	1.00
151_L	178_V	1.120	1.00
317_E	350_I	1.118	1.00
209_E	225_R	1.117	1.00
199_A	244_D	1.110	1.00
326_F	330_F	1.106	1.00
42_L	62_M	1.105	1.00
434_T	438_K	1.105	1.00
197_N	244_D	1.103	1.00
260_R	272_S	1.102	1.00
243_G	285_L	1.100	1.00
140_G	184_A	1.100	1.00
33_A	48_Q	1.096	1.00
208_S	213_H	1.093	1.00
422_T	432_R	1.091	1.00
65_I	95_A	1.091	1.00
167_I	278_I	1.090	1.00
58_R	86_Y	1.085	1.00
330_F	365_V	1.084	1.00
166_L	279_A	1.082	1.00
290_N	296_Q	1.079	1.00
331_A	337_A	1.076	1.00
176_E	195_T	1.074	1.00
160_P	187_A	1.073	1.00
155_I	182_I	1.069	1.00
230_V	262_V	1.068	1.00
215_K	223_K	1.062	1.00
206_L	210_L	1.057	1.00
344_Q	378_S	1.042	1.00
38_G	42_L	1.042	1.00
414_L	439_L	1.041	1.00
35_A	41_A	1.035	1.00
7_D	50_F	1.035	1.00
328_Q	332_E	1.034	1.00
167_I	178_V	1.033	1.00
148_M	151_L	1.033	1.00
410_I	435_L	1.033	1.00
55_C	80_V	1.032	1.00
66_A	69_K	1.029	1.00
7_D	48_Q	1.028	1.00
316_R	350_I	1.028	1.00
413_A	424_A	1.026	1.00
12_D	59_M	1.025	1.00
94_E	97_K	1.024	1.00
155_I	307_I	1.022	1.00
303_N	306_A	1.022	1.00
141_M	177_L	1.013	1.00
28_W	118_E	1.010	1.00
54_L	113_L	1.009	1.00
286_A	385_A	1.005	1.00
233_D	275_V	1.005	1.00
405_V	409_V	0.997	1.00
164_T	260_R	0.997	1.00
368_A	372_L	0.987	1.00
236_T	278_I	0.987	1.00
181_A	185_S	0.980	1.00
163_A	304_V	0.979	1.00
319_I	349_L	0.977	1.00
55_C	59_M	0.971	1.00
218_F	221_A	0.971	1.00
141_M	178_V	0.964	1.00
217_A	265_V	0.960	1.00
146_P	150_H	0.955	1.00
326_F	365_V	0.953	1.00
51_D	124_T	0.950	1.00
52_L	121_L	0.947	1.00
170_D	173_T	0.945	1.00
10_V	32_V	0.944	1.00
213_H	265_V	0.942	1.00
231_E	268_N	0.941	1.00
165_V	182_I	0.939	1.00
40_Q	43_E	0.938	1.00
414_L	424_A	0.936	1.00
71_I	80_V	0.930	1.00
67_T	71_I	0.923	1.00
126_S	129_A	0.922	1.00
162_E	187_A	0.921	1.00
69_K	94_E	0.918	1.00
25_L	117_L	0.918	1.00
414_L	421_K	0.915	1.00
319_I	323_A	0.915	1.00
408_E	412_A	0.914	1.00
43_E	47_E	0.913	1.00
421_K	433_K	0.913	1.00
147_A	150_H	0.911	1.00
54_L	81_L	0.909	1.00
195_T	255_R	0.907	1.00
410_I	438_K	0.904	1.00
194_V	232_A	0.900	1.00
412_A	415_E	0.899	1.00
264_R	271_I	0.896	1.00
57_V	82_I	0.893	1.00
17_H	108_L	0.892	1.00
424_A	427_Q	0.890	1.00
347_D	350_I	0.884	1.00
421_K	428_L	0.880	1.00
180_R	184_A	0.871	1.00
44_Q	47_E	0.871	1.00
168_H	286_A	0.871	1.00
434_T	437_A	0.870	1.00
331_A	338_V	0.870	1.00
126_S	130_E	0.870	1.00
237_L	277_L	0.868	1.00
229_F	275_V	0.868	1.00
408_E	411_L	0.867	1.00
213_H	225_R	0.866	1.00
43_E	46_R	0.863	1.00
362_E	366_E	0.863	1.00
151_L	155_I	0.862	1.00
421_K	439_L	0.859	1.00
44_Q	48_Q	0.859	1.00
368_A	377_I	0.856	1.00
419_G	439_L	0.854	1.00
122_A	125_H	0.853	1.00
143_G	178_V	0.853	1.00
208_S	218_F	0.852	1.00
410_I	428_L	0.851	1.00
341_F	345_A	0.848	1.00
143_G	155_I	0.847	1.00
143_G	321_L	0.845	1.00
39_R	43_E	0.844	1.00
367_R	371_L	0.842	1.00
277_L	302_L	0.841	1.00
324_G	340_G	0.839	1.00
40_Q	44_Q	0.838	1.00
402_L	409_V	0.836	1.00
435_L	438_K	0.831	1.00
124_T	128_D	0.830	1.00
432_R	436_L	0.829	1.00
231_E	267_S	0.828	1.00
15_I	18_C	0.826	1.00
194_V	231_E	0.825	1.00
213_H	221_A	0.821	1.00
341_F	377_I	0.821	1.00
167_I	309_V	0.821	1.00
55_C	71_I	0.819	1.00
13_D	56_D	0.815	1.00
206_L	245_I	0.815	1.00
62_M	66_A	0.814	1.00
401_P	404_E	0.810	1.00
149_Q	153_S	0.810	1.00
66_A	70_E	0.808	1.00
69_K	73_A	0.807	1.00
304_V	363_N	0.804	1.00
428_L	438_K	0.803	1.00
343_P	346_M	0.801	1.00
430_I	434_T	0.798	1.00
122_A	127_I	0.798	1.00
37_S	59_M	0.795	1.00
12_D	17_H	0.795	1.00
245_I	249_M	0.793	1.00
164_T	279_A	0.793	1.00
115_A	119_K	0.791	1.00
42_L	67_T	0.791	1.00
146_P	149_Q	0.790	1.00
8_I	25_L	0.790	1.00
237_L	256_A	0.787	1.00
262_V	271_I	0.785	1.00
224_R	269_Q	0.784	1.00
97_K	102_D	0.783	1.00
336_K	369_V	0.783	1.00
202_N	265_V	0.783	1.00
62_M	70_E	0.782	1.00
11_V	67_T	0.776	1.00
286_A	299_Y	0.776	1.00
52_L	79_P	0.773	1.00
35_A	38_G	0.773	1.00
38_G	61_E	0.772	1.00
93_V	97_K	0.771	1.00
383_P	387_A	0.769	1.00
320_P	324_G	0.768	1.00
54_L	83_M	0.767	1.00
167_I	179_A	0.767	1.00
10_V	21_L	0.765	1.00
163_A	305_V	0.761	1.00
229_F	273_V	0.760	1.00
286_A	296_Q	0.760	1.00
144_K	149_Q	0.760	1.00
289_V	299_Y	0.759	1.00
45_V	53_V	0.757	1.00
109_D	112_N	0.756	1.00
431_T	436_L	0.754	1.00
13_D	106_K	0.751	1.00
319_I	350_I	0.750	1.00
13_D	84_T	0.750	1.00
364_A	368_A	0.747	1.00
35_A	40_Q	0.746	1.00
72_K	79_P	0.746	1.00
152_L	178_V	0.745	1.00
197_N	245_I	0.745	1.00
417_T	423_E	0.742	0.99
224_R	264_R	0.741	0.99
21_L	113_L	0.740	0.99
428_L	434_T	0.739	0.99
213_H	222_D	0.739	0.99
11_V	53_V	0.738	0.99
226_E	231_E	0.734	0.99
141_M	148_M	0.733	0.99
229_F	262_V	0.733	0.99
255_R	259_E	0.731	0.99
152_L	181_A	0.731	0.99
163_A	370_V	0.731	0.99
55_C	68_L	0.730	0.99
158_V	165_V	0.730	0.99
129_A	133_A	0.728	0.99
9_L	50_F	0.728	0.99
14_D	17_H	0.727	0.99
245_I	253_L	0.724	0.99
149_Q	152_L	0.723	0.99
225_R	228_R	0.722	0.99
159_A	186_S	0.722	0.99
323_A	368_A	0.721	0.99
436_L	440_S	0.721	0.99
436_L	439_L	0.719	0.99
421_K	432_R	0.716	0.99
243_G	282_H	0.715	0.99
400_Q	404_E	0.715	0.99
368_A	382_L	0.713	0.99
330_F	362_E	0.711	0.99
39_R	62_M	0.711	0.99
142_V	321_L	0.710	0.99
228_R	231_E	0.710	0.99
24_L	114_Q	0.709	0.99
64_G	106_K	0.709	0.99
286_A	306_A	0.707	0.99
10_V	22_Q	0.705	0.99
303_N	367_R	0.702	0.99
83_M	108_L	0.699	0.99
330_F	334_N	0.696	0.99
68_L	100_A	0.695	0.99
336_K	339_K	0.695	0.99
348_L	352_Y	0.694	0.99
119_K	126_S	0.694	0.99
13_D	85_A	0.694	0.99
153_S	373_T	0.692	0.99
118_E	122_A	0.690	0.99
311_S	314_Q	0.687	0.99
56_D	106_K	0.687	0.99
89_V	92_A	0.687	0.99
339_K	369_V	0.686	0.99
401_P	409_V	0.684	0.99
323_A	346_M	0.683	0.99
226_E	268_N	0.680	0.99
435_L	439_L	0.680	0.99
92_A	100_A	0.680	0.99
147_A	314_Q	0.679	0.99
157_L	371_L	0.678	0.99
21_L	83_M	0.675	0.99
403_V	407_K	0.675	0.99
299_Y	303_N	0.674	0.99
87_S	105_I	0.667	0.99
45_V	78_I	0.667	0.99
219_T	280_A	0.667	0.99
116_T	120_A	0.666	0.99
330_F	366_E	0.665	0.99
90_E	94_E	0.665	0.99
15_I	19_T	0.664	0.99
7_D	51_D	0.662	0.99
57_V	63_D	0.660	0.99
414_L	419_G	0.659	0.99
402_L	438_K	0.659	0.99
215_K	222_D	0.659	0.99
45_V	75_N	0.657	0.99
13_D	64_G	0.656	0.99
217_A	221_A	0.655	0.99
415_E	419_G	0.655	0.99
115_A	126_S	0.652	0.99
430_I	435_L	0.651	0.99
400_Q	408_E	0.650	0.99
53_V	67_T	0.650	0.99
243_G	283_R	0.648	0.99
420_N	436_L	0.646	0.99
410_I	439_L	0.645	0.99
404_E	408_E	0.645	0.99
65_I	94_E	0.644	0.99
30_Y	114_Q	0.643	0.99
202_N	205_L	0.643	0.99
348_L	382_L	0.641	0.99
11_V	59_M	0.641	0.99
316_R	321_L	0.641	0.99
122_A	126_S	0.640	0.98
432_R	437_A	0.640	0.98
151_L	154_E	0.637	0.98
343_P	347_D	0.635	0.98
157_L	336_K	0.633	0.98
215_K	224_R	0.633	0.98
171_S	244_D	0.632	0.98
224_R	267_S	0.632	0.98
138_Q	152_L	0.631	0.98
140_G	181_A	0.631	0.98
201_L	210_L	0.630	0.98
219_T	282_H	0.629	0.98
298_L	302_L	0.628	0.98
331_A	336_K	0.626	0.98
243_G	294_F	0.623	0.98
79_P	127_I	0.622	0.98
327_L	365_V	0.619	0.98
323_A	327_L	0.618	0.98
87_S	92_A	0.617	0.98
154_E	157_L	0.615	0.98
331_A	369_V	0.615	0.98
46_R	70_E	0.615	0.98
102_D	116_T	0.613	0.98
196_L	228_R	0.612	0.98
196_L	237_L	0.610	0.98
157_L	381_E	0.609	0.98
437_A	440_S	0.605	0.98
215_K	221_A	0.605	0.98
432_R	435_L	0.605	0.98
101_L	116_T	0.602	0.98
421_K	438_K	0.602	0.98
108_L	113_L	0.601	0.98
162_E	334_N	0.601	0.98
229_F	277_L	0.600	0.98
177_L	181_A	0.599	0.98
188_R	191_K	0.596	0.98
23_A	27_G	0.596	0.98
126_S	133_A	0.594	0.98
159_A	185_S	0.594	0.98
144_K	317_E	0.594	0.98
87_S	103_Y	0.592	0.98
364_A	386_I	0.592	0.98
205_L	219_T	0.592	0.98
84_T	106_K	0.592	0.98
9_L	41_A	0.591	0.97
45_V	50_F	0.591	0.97
260_R	275_V	0.590	0.97
433_K	440_S	0.589	0.97
321_L	324_G	0.586	0.97
334_N	369_V	0.586	0.97
121_L	124_T	0.586	0.97
20_I	24_L	0.585	0.97
242_I	302_L	0.585	0.97
404_E	407_K	0.580	0.97
112_N	115_A	0.578	0.97
225_R	231_E	0.576	0.97
155_I	185_S	0.574	0.97
79_P	124_T	0.574	0.97
286_A	289_V	0.573	0.97
50_F	78_I	0.571	0.97
430_I	438_K	0.571	0.97
153_S	157_L	0.571	0.97
369_V	372_L	0.570	0.97
352_Y	386_I	0.568	0.97
146_P	317_E	0.567	0.97
53_V	80_V	0.567	0.97
216_G	221_A	0.565	0.97
243_G	280_A	0.564	0.97
348_L	386_I	0.563	0.97
228_R	270_I	0.561	0.97
421_K	435_L	0.556	0.96
233_D	272_S	0.555	0.96
160_P	186_S	0.555	0.96
161_S	370_V	0.554	0.96
218_F	225_R	0.551	0.96
214_E	271_I	0.550	0.96
283_R	293_R	0.549	0.96
233_D	260_R	0.549	0.96
79_P	123_H	0.547	0.96
103_Y	112_N	0.547	0.96
234_G	275_V	0.546	0.96
41_A	67_T	0.546	0.96
238_F	278_I	0.546	0.96
179_A	193_L	0.545	0.96
154_E	305_V	0.543	0.96
37_S	60_A	0.542	0.96
305_V	370_V	0.540	0.96
22_Q	32_V	0.540	0.96
16_S	20_I	0.540	0.96
59_M	64_G	0.539	0.96
176_E	259_E	0.539	0.96
420_N	424_A	0.538	0.96
304_V	366_E	0.537	0.96
26_R	32_V	0.537	0.96
15_I	36_N	0.537	0.96
348_L	351_H	0.536	0.96
240_D	359_R	0.535	0.96
101_L	123_H	0.533	0.95
197_N	200_A	0.533	0.95
327_L	331_A	0.532	0.95
196_L	210_L	0.532	0.95
148_M	178_V	0.532	0.95
64_G	85_A	0.531	0.95
226_E	262_V	0.530	0.95
405_V	428_L	0.530	0.95
201_L	206_L	0.527	0.95
328_Q	338_V	0.527	0.95
173_T	177_L	0.527	0.95
83_M	86_Y	0.526	0.95
333_R	362_E	0.526	0.95
233_D	271_I	0.525	0.95
325_H	328_Q	0.525	0.95
205_L	265_V	0.525	0.95
406_E	410_I	0.525	0.95
208_S	216_G	0.524	0.95
150_H	154_E	0.524	0.95
327_L	338_V	0.524	0.95
164_T	304_V	0.524	0.95
143_G	318_D	0.522	0.95
18_C	38_G	0.522	0.95
256_A	273_V	0.521	0.95
138_Q	181_A	0.521	0.95
104_L	108_L	0.521	0.95
288_E	294_F	0.520	0.95
338_V	369_V	0.519	0.95
223_K	268_N	0.518	0.95
421_K	437_A	0.518	0.95
65_I	91_T	0.517	0.95
192_P	231_E	0.517	0.95
178_V	181_A	0.517	0.95
224_R	271_I	0.515	0.94
191_K	233_D	0.515	0.94
138_Q	185_S	0.512	0.94
147_A	317_E	0.512	0.94
317_E	320_P	0.512	0.94
11_V	38_G	0.512	0.94
256_A	259_E	0.512	0.94
373_T	381_E	0.512	0.94
433_K	438_K	0.511	0.94
214_E	217_A	0.511	0.94
141_M	181_A	0.511	0.94
152_L	156_A	0.511	0.94
37_S	62_M	0.510	0.94
400_Q	405_V	0.509	0.94
421_K	431_T	0.509	0.94
105_I	112_N	0.508	0.94
10_V	25_L	0.508	0.94
19_T	22_Q	0.507	0.94
58_R	88_S	0.507	0.94
83_M	104_L	0.507	0.94
330_F	333_R	0.506	0.94
192_P	235_G	0.506	0.94
421_K	424_A	0.505	0.94
71_I	78_I	0.505	0.94
8_I	121_L	0.504	0.94
431_T	438_K	0.504	0.94
123_H	127_I	0.504	0.94
13_D	59_M	0.503	0.94
233_D	262_V	0.503	0.94
243_G	288_E	0.503	0.94
112_N	116_T	0.502	0.94
90_E	112_N	0.502	0.94
25_L	32_V	0.502	0.94
64_G	84_T	0.502	0.94
209_E	228_R	0.501	0.94
422_T	425_A	0.501	0.94
177_L	358_I	0.501	0.94
409_V	436_L	0.500	0.94
260_R	273_V	0.500	0.94
421_K	430_I	0.500	0.94

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4l4uA	2	0.8662	100	0.097	Contact Map
3dzdA	2	0.8345	100	0.257	Contact Map
1ojlA	3	0.6825	100	0.438	Contact Map
4fwgA	3	0.6122	100	0.619	Contact Map
1r6bX	1	0.8798	100	0.635	Contact Map
3pxiA	3	0.8277	100	0.642	Contact Map
1qvrA	3	0.8594	100	0.642	Contact Map
4qhsA	3	0.5533	100	0.656	Contact Map
4d2uA	3	0.873	100	0.657	Contact Map
4ciuA	1	0.8526	100	0.657	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0123 seconds.