MOEA - ECOLI - GREMLIN Contacts

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MOEA - Molybdopterin molybdenumtransferase

UniProt:	P12281	Sequences: MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFGGL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10153
Length:	411 (394)
Sequences:	5336 (4081)
Seq/√Len:	205.6

ECOLI - MOEA
BACSU - MOEA
HALSA - Q9HST2 Q9HST3
SULSO - Q97W71 Q7LXN4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
181_A	244_A	3.612	1.00
213_L	218_C	3.515	1.00
28_E	38_R	3.311	1.00
42_S	173_P	3.170	1.00
164_I	172_V	3.143	1.00
234_R	267_E	3.100	1.00
157_T	160_E	3.087	1.00
75_P	94_T	3.021	1.00
29_T	171_E	2.928	1.00
332_R	400_E	2.861	1.00
104_V	136_I	2.801	1.00
154_T	160_E	2.783	1.00
54_D	138_R	2.728	1.00
91_P	94_T	2.677	1.00
332_R	398_W	2.660	1.00
394_E	397_E	2.565	1.00
49_D	139_R	2.463	1.00
338_R	394_E	2.411	1.00
346_L	385_V	2.400	1.00
64_R	67_D	2.309	1.00
43_D	151_P	2.276	1.00
197_G	200_Q	2.268	1.00
335_T	393_V	2.256	1.00
149_V	167_L	2.255	1.00
49_D	145_A	2.245	1.00
43_D	148_V	2.209	1.00
338_R	395_V	2.193	1.00
45_V	148_V	2.189	1.00
295_C	312_V	2.180	1.00
54_D	139_R	2.150	1.00
43_D	152_A	2.140	1.00
346_L	388_R	2.119	1.00
32_L	165_A	2.102	1.00
333_V	401_V	2.089	1.00
118_E	125_R	2.048	1.00
270_E	288_K	2.032	1.00
40_L	150_F	2.015	1.00
29_T	173_P	2.006	1.00
221_I	244_A	1.960	1.00
26_A	176_R	1.902	1.00
382_C	401_V	1.884	1.00
351_G	382_C	1.883	1.00
49_D	144_S	1.875	1.00
330_R	400_E	1.871	1.00
351_G	384_I	1.858	1.00
354_Q	364_T	1.855	1.00
15_N	19_S	1.835	1.00
162_P	208_A	1.825	1.00
230_P	264_I	1.820	1.00
10_L	348_F	1.789	1.00
150_F	160_E	1.786	1.00
144_S	147_A	1.765	1.00
190_Q	200_Q	1.761	1.00
62_A	108_C	1.719	1.00
78_G	96_I	1.717	1.00
313_Q	317_A	1.702	1.00
30_L	38_R	1.697	1.00
336_A	362_E	1.688	1.00
230_P	263_T	1.686	1.00
89_E	106_E	1.681	1.00
55_N	137_R	1.672	1.00
239_E	243_Q	1.664	1.00
334_R	398_W	1.662	1.00
113_M	116_Q	1.649	1.00
308_F	312_V	1.627	1.00
336_A	364_T	1.622	1.00
21_V	315_L	1.619	1.00
216_L	308_F	1.611	1.00
63_V	110_A	1.596	1.00
246_V	316_L	1.595	1.00
117_T	124_V	1.595	1.00
295_C	315_L	1.595	1.00
248_I	312_V	1.594	1.00
177_K	219_E	1.591	1.00
65_L	109_E	1.584	1.00
65_L	110_A	1.577	1.00
179_R	219_E	1.575	1.00
27_Q	173_P	1.567	1.00
81_F	258_A	1.564	1.00
333_V	363_V	1.557	1.00
148_V	151_P	1.550	1.00
34_Q	214_E	1.549	1.00
352_V	364_T	1.547	1.00
276_L	311_L	1.528	1.00
77_A	94_T	1.516	1.00
28_E	176_R	1.479	1.00
182_L	210_H	1.467	1.00
53_F	103_P	1.462	1.00
31_P	34_Q	1.454	1.00
208_A	305_T	1.453	1.00
156_L	160_E	1.450	1.00
227_R	232_A	1.448	1.00
305_T	377_F	1.433	1.00
44_V	164_I	1.394	1.00
390_R	397_E	1.389	1.00
230_P	267_E	1.385	1.00
265_L	294_F	1.378	1.00
352_V	381_N	1.370	1.00
331_Q	403_P	1.361	1.00
246_V	295_C	1.353	1.00
112_V	117_T	1.348	1.00
213_L	220_V	1.343	1.00
9_S	12_T	1.342	1.00
47_P	169_I	1.338	1.00
334_R	362_E	1.334	1.00
333_V	353_L	1.332	1.00
111_V	135_N	1.332	1.00
212_M	308_F	1.327	1.00
112_V	126_F	1.326	1.00
18_L	318_K	1.322	1.00
384_I	399_V	1.318	1.00
229_D	232_A	1.318	1.00
10_L	311_L	1.312	1.00
118_E	127_T	1.311	1.00
90_W	108_C	1.309	1.00
48_L	202_Y	1.307	1.00
234_R	238_I	1.297	1.00
114_Q	255_V	1.295	1.00
317_A	322_N	1.291	1.00
151_P	154_T	1.283	1.00
226_I	236_A	1.283	1.00
63_V	68_I	1.281	1.00
64_R	109_E	1.273	1.00
278_I	311_L	1.271	1.00
12_T	15_N	1.269	1.00
131_R	134_Q	1.267	1.00
35_C	172_V	1.262	1.00
66_A	109_E	1.262	1.00
36_F	214_E	1.261	1.00
284_F	311_L	1.260	1.00
235_A	239_E	1.260	1.00
47_P	167_L	1.258	1.00
344_G	389_D	1.255	1.00
181_A	223_L	1.254	1.00
196_L	199_G	1.249	1.00
78_G	86_Y	1.245	1.00
306_L	383_F	1.243	1.00
330_R	402_E	1.242	1.00
249_S	294_F	1.239	1.00
310_Q	402_E	1.228	1.00
161_L	207_L	1.221	1.00
81_F	84_Q	1.218	1.00
98_I	102_A	1.214	1.00
79_K	257_E	1.195	1.00
79_K	258_A	1.194	1.00
238_I	268_L	1.194	1.00
161_L	211_L	1.192	1.00
10_L	278_I	1.191	1.00
138_R	141_E	1.185	1.00
230_P	234_R	1.185	1.00
97_R	114_Q	1.182	1.00
285_A	296_G	1.182	1.00
54_D	106_E	1.181	1.00
337_S	365_T	1.176	1.00
120_M	125_R	1.175	1.00
216_L	313_Q	1.173	1.00
363_V	382_C	1.171	1.00
223_L	244_A	1.170	1.00
223_L	243_Q	1.166	1.00
179_R	221_I	1.165	1.00
11_D	346_L	1.157	1.00
192_P	207_L	1.154	1.00
383_F	404_F	1.150	1.00
335_T	339_L	1.150	1.00
212_M	309_Y	1.146	1.00
182_L	213_L	1.142	1.00
16_E	272_A	1.142	1.00
147_A	375_S	1.140	1.00
110_A	130_V	1.136	1.00
206_R	222_N	1.128	1.00
348_F	385_V	1.127	1.00
30_L	35_C	1.124	1.00
241_D	292_S	1.123	1.00
156_L	161_L	1.120	1.00
351_G	363_V	1.119	1.00
17_M	286_F	1.116	1.00
36_F	161_L	1.114	1.00
155_R	322_N	1.112	1.00
31_P	171_E	1.110	1.00
104_V	111_V	1.105	1.00
190_Q	196_L	1.098	1.00
223_L	240_A	1.090	1.00
65_L	132_S	1.089	1.00
180_V	213_L	1.087	1.00
363_V	401_V	1.085	1.00
113_M	135_N	1.085	1.00
234_R	268_L	1.084	1.00
353_L	381_N	1.083	1.00
80_S	96_I	1.076	1.00
39_I	155_R	1.073	1.00
84_Q	187_D	1.073	1.00
353_L	363_V	1.071	1.00
80_S	86_Y	1.068	1.00
247_V	292_S	1.066	1.00
162_P	374_F	1.066	1.00
97_R	257_E	1.065	1.00
116_Q	128_A	1.065	1.00
20_R	286_F	1.062	1.00
183_F	226_I	1.062	1.00
193_G	202_Y	1.051	1.00
117_T	126_F	1.047	1.00
232_A	235_A	1.044	1.00
386_L	393_V	1.038	1.00
57_A	137_R	1.036	1.00
185_T	261_T	1.035	1.00
286_F	295_C	1.035	1.00
355_R	359_G	1.026	1.00
158_T	215_Q	1.026	1.00
353_L	401_V	1.022	1.00
213_L	308_F	1.022	1.00
309_Y	313_Q	1.022	1.00
80_S	85_P	1.015	1.00
39_I	322_N	1.011	1.00
231_H	235_A	1.009	1.00
184_S	250_S	1.008	1.00
218_C	316_L	1.006	1.00
119_Q	122_N	1.004	1.00
279_K	347_D	1.001	1.00
57_A	135_N	0.996	1.00
263_T	266_E	0.996	1.00
58_M	113_M	0.988	1.00
58_M	135_N	0.986	1.00
353_L	382_C	0.979	1.00
120_M	123_G	0.967	1.00
8_M	16_E	0.966	1.00
35_C	156_L	0.962	1.00
272_A	288_K	0.959	0.99
337_S	364_T	0.956	0.99
183_F	236_A	0.951	0.99
221_I	243_Q	0.950	0.99
99_M	258_A	0.946	0.99
365_T	384_I	0.943	0.99
352_V	379_L	0.941	0.99
210_H	214_E	0.939	0.99
180_V	218_C	0.937	0.99
203_D	206_R	0.933	0.99
246_V	293_W	0.930	0.99
262_K	274_W	0.929	0.99
234_R	264_I	0.927	0.99
236_A	239_E	0.925	0.99
61_Y	119_Q	0.918	0.99
7_L	282_K	0.917	0.99
191_L	194_Q	0.917	0.99
99_M	257_E	0.917	0.99
175_I	320_S	0.916	0.99
38_R	177_K	0.912	0.99
278_I	307_T	0.912	0.99
232_A	236_A	0.908	0.99
64_R	92_A	0.907	0.99
41_A	175_I	0.907	0.99
196_L	202_Y	0.906	0.99
160_E	378_S	0.905	0.99
36_F	211_L	0.902	0.99
27_Q	41_A	0.902	0.99
46_S	167_L	0.900	0.99
16_E	19_S	0.898	0.99
42_S	169_I	0.897	0.99
350_R	369_Q	0.897	0.99
182_L	220_V	0.896	0.99
52_G	201_I	0.895	0.99
168_G	202_Y	0.893	0.99
309_Y	328_P	0.893	0.99
90_W	96_I	0.892	0.99
302_V	350_R	0.890	0.99
61_Y	114_Q	0.888	0.99
86_Y	96_I	0.886	0.99
176_R	245_D	0.884	0.99
65_L	68_I	0.878	0.99
214_E	220_V	0.874	0.99
337_S	395_V	0.872	0.99
68_I	71_G	0.870	0.99
61_Y	117_T	0.869	0.99
78_G	88_G	0.869	0.99
385_V	400_E	0.867	0.99
231_H	234_R	0.862	0.99
226_I	232_A	0.859	0.99
209_V	308_F	0.858	0.99
36_F	215_Q	0.858	0.99
109_E	132_S	0.857	0.99
184_S	206_R	0.856	0.99
8_M	13_A	0.852	0.99
114_Q	117_T	0.847	0.99
12_T	16_E	0.845	0.99
184_S	224_G	0.842	0.99
141_E	370_G	0.840	0.99
181_A	247_V	0.839	0.99
156_L	164_I	0.830	0.99
286_F	293_W	0.828	0.99
57_A	141_E	0.828	0.99
340_K	392_N	0.826	0.98
330_R	385_V	0.824	0.98
75_P	91_P	0.817	0.98
11_D	15_N	0.810	0.98
338_R	392_N	0.809	0.98
37_G	215_Q	0.806	0.98
75_P	123_G	0.806	0.98
63_V	112_V	0.804	0.98
230_P	233_L	0.803	0.98
178_V	218_C	0.802	0.98
54_D	104_V	0.801	0.98
276_L	284_F	0.801	0.98
67_D	74_L	0.797	0.98
307_T	311_L	0.796	0.98
48_L	196_L	0.796	0.98
88_G	96_I	0.795	0.98
99_M	114_Q	0.795	0.98
191_L	203_D	0.794	0.98
164_I	169_I	0.793	0.98
150_F	154_T	0.792	0.98
203_D	207_L	0.790	0.98
288_K	291_N	0.790	0.98
210_H	220_V	0.789	0.98
233_L	264_I	0.788	0.98
265_L	287_G	0.787	0.98
214_E	219_E	0.784	0.98
142_D	373_I	0.781	0.98
190_Q	194_Q	0.778	0.98
238_I	290_S	0.777	0.98
368_H	373_I	0.777	0.98
68_I	110_A	0.777	0.98
246_V	319_L	0.777	0.98
351_G	401_V	0.776	0.98
152_A	175_I	0.773	0.98
273_F	286_F	0.772	0.98
298_P	303_S	0.771	0.98
44_V	173_P	0.769	0.98
212_M	305_T	0.767	0.98
38_R	174_V	0.766	0.98
103_P	198_D	0.760	0.97
183_F	247_V	0.760	0.97
76_V	124_V	0.759	0.97
380_G	404_F	0.758	0.97
310_Q	348_F	0.754	0.97
254_S	283_P	0.754	0.97
236_A	240_A	0.752	0.97
240_A	247_V	0.751	0.97
382_C	404_F	0.751	0.97
387_E	390_R	0.751	0.97
137_R	298_P	0.751	0.97
297_L	312_V	0.751	0.97
18_L	314_P	0.751	0.97
190_Q	197_G	0.751	0.97
288_K	293_W	0.745	0.97
80_S	98_I	0.738	0.97
241_D	247_V	0.736	0.97
187_D	227_R	0.736	0.97
334_R	396_G	0.735	0.97
181_A	240_A	0.734	0.97
182_L	209_V	0.732	0.97
363_V	384_I	0.731	0.97
233_L	260_Y	0.731	0.97
355_R	361_L	0.731	0.97
188_E	228_D	0.729	0.97
282_K	303_S	0.728	0.97
253_V	296_G	0.728	0.97
29_T	42_S	0.727	0.97
240_A	244_A	0.725	0.97
65_L	130_V	0.716	0.96
351_G	381_N	0.715	0.96
143_I	149_V	0.714	0.96
284_F	307_T	0.713	0.96
309_Y	383_F	0.713	0.96
191_L	207_L	0.713	0.96
76_V	95_C	0.709	0.96
279_K	345_R	0.706	0.96
44_V	169_I	0.706	0.96
142_D	302_V	0.705	0.96
184_S	225_I	0.704	0.96
195_P	202_Y	0.703	0.96
277_A	388_R	0.700	0.96
349_Q	365_T	0.697	0.96
373_I	376_S	0.696	0.96
77_A	91_P	0.695	0.96
224_G	236_A	0.695	0.96
230_P	260_Y	0.693	0.96
261_T	294_F	0.692	0.96
100_T	115_E	0.691	0.95
46_S	49_D	0.691	0.95
68_I	74_L	0.690	0.95
67_D	92_A	0.690	0.95
24_L	176_R	0.690	0.95
213_L	216_L	0.689	0.95
341_K	386_L	0.689	0.95
237_F	247_V	0.688	0.95
68_I	73_P	0.688	0.95
274_W	285_A	0.685	0.95
393_V	397_E	0.682	0.95
77_A	90_W	0.682	0.95
79_K	97_R	0.681	0.95
17_M	315_L	0.678	0.95
366_T	380_G	0.677	0.95
262_K	266_E	0.674	0.95
27_Q	175_I	0.673	0.95
170_A	192_P	0.671	0.95
71_G	129_E	0.671	0.95
82_A	102_A	0.668	0.95
331_Q	361_L	0.667	0.95
76_V	119_Q	0.667	0.95
189_L	203_D	0.666	0.94
354_Q	362_E	0.664	0.94
90_W	94_T	0.663	0.94
99_M	102_A	0.663	0.94
9_S	277_A	0.662	0.94
271_I	285_A	0.660	0.94
289_L	293_W	0.660	0.94
375_S	379_L	0.660	0.94
249_S	261_T	0.659	0.94
264_I	268_L	0.658	0.94
370_G	373_I	0.656	0.94
67_D	93_G	0.656	0.94
50_V	142_D	0.656	0.94
110_A	132_S	0.655	0.94
14_L	18_L	0.653	0.94
262_K	285_A	0.652	0.94
66_A	132_S	0.651	0.94
33_V	210_H	0.650	0.94
43_D	154_T	0.649	0.94
16_E	20_R	0.648	0.94
40_L	172_V	0.647	0.94
52_G	140_G	0.647	0.94
271_I	287_G	0.647	0.94
85_P	199_G	0.646	0.94
212_M	216_L	0.646	0.94
272_A	286_F	0.645	0.93
184_S	203_D	0.645	0.93
8_M	273_F	0.644	0.93
61_Y	124_V	0.640	0.93
85_P	103_P	0.639	0.93
159_A	305_T	0.639	0.93
249_S	253_V	0.637	0.93
21_V	319_L	0.637	0.93
21_V	293_W	0.636	0.93
203_D	225_I	0.636	0.93
65_L	69_A	0.635	0.93
33_V	214_E	0.634	0.93
210_H	222_N	0.633	0.93
81_F	99_M	0.632	0.93
50_V	143_I	0.631	0.93
74_L	124_V	0.630	0.93
40_L	43_D	0.628	0.93
339_L	384_I	0.628	0.93
54_D	136_I	0.627	0.93
183_F	223_L	0.625	0.92
183_F	224_G	0.624	0.92
283_P	371_S	0.624	0.92
315_L	319_L	0.622	0.92
141_E	372_H	0.622	0.92
248_I	308_F	0.619	0.92
341_K	347_D	0.618	0.92
189_L	202_Y	0.616	0.92
191_L	225_I	0.615	0.92
282_K	345_R	0.615	0.92
150_F	164_I	0.615	0.92
187_D	225_I	0.613	0.92
9_S	388_R	0.612	0.92
48_L	52_G	0.610	0.91
100_T	283_P	0.609	0.91
110_A	134_Q	0.606	0.91
350_R	373_I	0.605	0.91
260_Y	263_T	0.602	0.91
363_V	399_V	0.601	0.91
181_A	224_G	0.600	0.91
77_A	96_I	0.598	0.91
38_R	176_R	0.595	0.90
142_D	375_S	0.595	0.90
10_L	346_L	0.593	0.90
181_A	221_I	0.590	0.90
187_D	258_A	0.590	0.90
336_A	354_Q	0.587	0.90
64_R	108_C	0.586	0.90
213_L	219_E	0.584	0.90
351_G	399_V	0.584	0.90
112_V	130_V	0.583	0.90
237_F	264_I	0.583	0.90
24_L	175_I	0.582	0.89
64_R	91_P	0.581	0.89
82_A	99_M	0.580	0.89
135_N	141_E	0.579	0.89
208_A	304_A	0.578	0.89
179_R	244_A	0.578	0.89
205_N	250_S	0.578	0.89
385_V	388_R	0.577	0.89
69_A	72_Q	0.577	0.89
176_R	179_R	0.576	0.89
27_Q	176_R	0.576	0.89
61_Y	95_C	0.575	0.89
170_A	193_G	0.574	0.89
70_S	129_E	0.574	0.89
124_V	127_T	0.573	0.89
302_V	377_F	0.573	0.89
53_F	201_I	0.571	0.89
26_A	175_I	0.571	0.89
20_R	288_K	0.571	0.89
63_V	74_L	0.570	0.89
322_N	325_S	0.570	0.89
347_D	350_R	0.569	0.88
209_V	248_I	0.567	0.88
264_I	267_E	0.565	0.88
175_I	321_G	0.564	0.88
185_T	228_D	0.564	0.88
300_N	371_S	0.564	0.88
28_E	177_K	0.564	0.88
24_L	319_L	0.562	0.88
226_I	233_L	0.560	0.88
17_M	311_L	0.560	0.88
104_V	107_G	0.558	0.87
142_D	166_S	0.558	0.87
165_A	207_L	0.557	0.87
55_N	372_H	0.557	0.87
149_V	163_V	0.556	0.87
30_L	174_V	0.556	0.87
68_I	130_V	0.556	0.87
69_A	73_P	0.556	0.87
66_A	92_A	0.555	0.87
20_R	270_E	0.554	0.87
56_S	300_N	0.553	0.87
77_A	86_Y	0.552	0.87
252_G	261_T	0.552	0.87
293_W	315_L	0.552	0.87
255_V	275_K	0.551	0.87
18_L	21_V	0.550	0.87
55_N	262_K	0.550	0.87
247_V	294_F	0.550	0.87
8_M	12_T	0.550	0.87
263_T	267_E	0.548	0.87
154_T	157_T	0.546	0.86
42_S	152_A	0.546	0.86
178_V	319_L	0.545	0.86
71_G	127_T	0.545	0.86
355_R	358_D	0.544	0.86
298_P	347_D	0.544	0.86
354_Q	358_D	0.543	0.86
117_T	127_T	0.542	0.86
137_R	262_K	0.542	0.86
265_L	289_L	0.541	0.86
317_A	320_S	0.541	0.86
390_R	393_V	0.541	0.86
52_G	139_R	0.541	0.86
58_M	137_R	0.541	0.86
87_H	90_W	0.540	0.86
346_L	387_E	0.539	0.86
75_P	122_N	0.539	0.86
113_M	134_Q	0.539	0.86
259_D	282_K	0.538	0.86
238_I	242_S	0.538	0.86
335_T	397_E	0.538	0.86
81_F	257_E	0.537	0.85
287_G	296_G	0.537	0.85
303_S	371_S	0.536	0.85
335_T	399_V	0.536	0.85
189_L	201_I	0.536	0.85
353_L	403_P	0.535	0.85
56_S	98_I	0.533	0.85
23_P	319_L	0.532	0.85
210_H	213_L	0.530	0.85
95_C	124_V	0.529	0.85
293_W	319_L	0.527	0.84
58_M	100_T	0.526	0.84
192_P	202_Y	0.524	0.84
216_L	317_A	0.524	0.84
284_F	370_G	0.524	0.84
213_L	316_L	0.524	0.84
333_V	354_Q	0.523	0.84
217_G	220_V	0.523	0.84
40_L	154_T	0.523	0.84
47_P	145_A	0.522	0.84
99_M	253_V	0.522	0.84
100_T	188_E	0.522	0.84
137_R	300_N	0.521	0.84
196_L	200_Q	0.521	0.84
80_S	84_Q	0.520	0.84
228_D	252_G	0.520	0.84
387_E	400_E	0.520	0.84
316_L	320_S	0.518	0.83
283_P	298_P	0.518	0.83
14_L	311_L	0.518	0.83
256_G	299_G	0.514	0.83
240_A	243_Q	0.513	0.83
11_D	14_L	0.510	0.82
10_L	14_L	0.510	0.82
147_A	379_L	0.509	0.82
310_Q	383_F	0.507	0.82
40_L	151_P	0.506	0.82
58_M	300_N	0.505	0.82
33_V	36_F	0.505	0.82
88_G	94_T	0.504	0.82
151_P	323_T	0.503	0.82
159_A	374_F	0.502	0.81
163_V	374_F	0.502	0.81
317_A	325_S	0.501	0.81
23_P	318_K	0.500	0.81

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1g8lA	2	0.9805	100	0.113	Contact Map
1uz5A	1	0.9392	100	0.138	Contact Map
4pd0A	2	0.9684	100	0.145	Contact Map
1wu2A	2	0.9173	100	0.154	Contact Map
3rfqA	5	0.3504	100	0.675	Contact Map
1jljA	3	0.3698	100	0.684	Contact Map
4lhbA	4	0.3479	100	0.704	Contact Map
3iwtA	4	0.3625	100	0.711	Contact Map
1y5eA	4	0.3528	100	0.712	Contact Map
4xcwA	3	0.3869	100	0.715	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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