GREMLIN Database
NARX - Nitrate/nitrite sensor protein NarX
UniProt: P0AFA2 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10646
Length: 598 (508)
Sequences: 6149 (5468)
Seq/√Len: 242.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
413_V434_I4.4961.00
535_Q578_E4.3551.00
572_R575_G4.1491.00
191_A196_D4.0381.00
514_S537_N3.7301.00
569_V579_V3.5161.00
423_L427_S3.2111.00
207_N210_A3.1251.00
366_V369_L2.9761.00
568_R580_V2.9451.00
263_P267_R2.8881.00
532_L581_V2.8771.00
522_T533_T2.8691.00
502_I559_R2.8241.00
546_I569_V2.8041.00
502_I560_A2.7351.00
481_K518_E2.7331.00
473_S476_F2.7251.00
557_R561_Q2.7241.00
529_Q582_T2.6921.00
494_H563_L2.6751.00
520_V535_Q2.5981.00
560_A581_V2.5901.00
245_N249_S2.5891.00
364_T369_L2.5701.00
518_E537_N2.5321.00
460_G463_P2.5021.00
556_M567_C2.4961.00
459_P494_H2.4931.00
526_N531_K2.4861.00
342_G349_P2.4711.00
342_G347_T2.4621.00
533_T578_E2.4201.00
417_Q432_S2.3941.00
571_R577_T2.3721.00
205_G210_A2.3461.00
522_T535_Q2.2691.00
524_A531_K2.2691.00
570_R578_E2.2611.00
462_R523_V2.2561.00
90_A93_D2.2361.00
541_V545_A2.2341.00
423_L426_S2.2171.00
14_Q207_N2.1961.00
533_T580_V2.1891.00
478_F482_L2.1821.00
531_K582_T2.1701.00
288_V294_E2.1471.00
483_D522_T2.1311.00
560_A565_G2.1091.00
559_R563_L2.0991.00
200_R217_N2.0931.00
365_L369_L2.0911.00
260_S275_L2.0741.00
90_A94_G2.0621.00
364_T367_E2.0601.00
514_S517_S2.0531.00
260_S268_L1.9731.00
327_G330_L1.9541.00
510_A519_V1.9291.00
571_R575_G1.9261.00
481_K520_V1.9201.00
424_P427_S1.9201.00
200_R224_A1.9151.00
410_K438_L1.9141.00
198_T224_A1.9011.00
390_E396_R1.8741.00
530_V585_P1.8521.00
342_G345_L1.8501.00
249_S253_Q1.8381.00
531_K580_V1.8331.00
571_R574_S1.7961.00
258_L272_L1.7791.00
417_Q435_R1.7711.00
536_D540_G1.7631.00
192_V220_S1.7631.00
502_I556_M1.7621.00
258_L278_L1.7511.00
274_G277_N1.7511.00
524_A533_T1.7431.00
86_L90_A1.7361.00
410_K439_N1.7271.00
108_N112_P1.7231.00
57_S60_L1.7111.00
288_V291_T1.6961.00
260_S272_L1.6931.00
542_P545_A1.6931.00
189_A219_M1.6901.00
130_F134_L1.6901.00
483_D520_V1.6751.00
329_T333_R1.6711.00
517_S537_N1.6581.00
91_E94_G1.6571.00
494_H499_L1.6561.00
525_Q585_P1.6521.00
244_K247_I1.6481.00
467_A500_L1.6421.00
508_S512_K1.6321.00
109_E112_P1.6231.00
281_L285_E1.6191.00
329_T332_W1.6091.00
364_T368_Q1.6001.00
216_L219_M1.5911.00
498_H501_Q1.5841.00
46_A49_K1.5591.00
417_Q428_R1.5581.00
409_M434_I1.5571.00
87_T94_G1.5381.00
566_D582_T1.5361.00
259_H272_L1.5231.00
54_R57_S1.5211.00
192_V219_M1.5141.00
200_R220_S1.5051.00
503_A532_L1.5021.00
514_S519_V1.5001.00
408_C437_E1.4711.00
390_E397_E1.4681.00
570_R580_V1.4631.00
185_L216_L1.4611.00
327_G332_W1.4321.00
349_P364_T1.4211.00
546_I571_R1.4131.00
344_L347_T1.3971.00
479_P518_E1.3831.00
561_Q566_D1.3761.00
171_I175_R1.3671.00
342_G348_L1.3641.00
542_P573_E1.3581.00
485_Q488_P1.3561.00
345_L349_P1.3531.00
200_R221_A1.3471.00
258_L262_A1.3451.00
495_Q498_H1.3411.00
86_L91_E1.3261.00
432_S436_N1.3261.00
498_H559_R1.3071.00
403_A441_S1.3021.00
255_N259_H1.3001.00
416_L427_S1.2991.00
49_K53_L1.2961.00
391_R394_I1.2951.00
137_L141_F1.2931.00
345_L348_L1.2881.00
569_V577_T1.2841.00
520_V537_N1.2801.00
289_Y294_E1.2751.00
258_L261_R1.2741.00
105_Y108_N1.2741.00
99_L102_L1.2731.00
242_E245_N1.2711.00
503_A534_V1.2691.00
412_Q430_L1.2641.00
386_I396_R1.2641.00
266_E272_L1.2591.00
394_I397_E1.2471.00
541_V577_T1.2441.00
86_L94_G1.2431.00
273_N277_N1.2301.00
272_L275_L1.2271.00
392_A396_R1.2231.00
460_G491_V1.2161.00
331_K342_G1.2101.00
261_R272_L1.2031.00
87_T91_E1.2011.00
343_I346_A1.2011.00
472_Y511_L1.1951.00
502_I581_V1.1941.00
178_L181_P1.1901.00
503_A507_L1.1881.00
565_G583_F1.1881.00
543_E546_I1.1841.00
98_Q101_G1.1801.00
290_D294_E1.1791.00
189_A216_L1.1771.00
252_W270_P1.1741.00
271_V276_Q1.1731.00
343_I347_T1.1731.00
276_Q283_D1.1711.00
396_R404_Q1.1701.00
53_L56_Q1.1691.00
478_F488_P1.1691.00
344_L348_L1.1681.00
382_Q386_I1.1621.00
45_H49_K1.1611.00
102_L109_E1.1511.00
506_A556_M1.1461.00
393_T397_E1.1421.00
57_S61_L1.1411.00
471_E504_R1.1361.00
465_L503_A1.1351.00
206_R210_A1.1331.00
95_Q99_L1.1311.00
461_L532_L1.1271.00
289_Y293_D1.1251.00
412_Q433_Q1.1241.00
501_Q559_R1.1221.00
443_A497_I1.1161.00
499_L581_V1.1091.00
448_L452_F1.1061.00
442_W446_R1.1051.00
288_V296_N1.1031.00
290_D293_D1.0921.00
560_A583_F1.0911.00
189_A212_L1.0901.00
217_N220_S1.0891.00
188_M201_A1.0861.00
393_T396_R1.0831.00
459_P464_A1.0821.00
499_L563_L1.0801.00
61_L64_V1.0751.00
408_C412_Q1.0711.00
328_T331_K1.0711.00
333_R340_Q1.0701.00
128_S133_G1.0701.00
499_L503_A1.0681.00
386_I397_E1.0671.00
507_L521_V1.0661.00
478_F486_L1.0601.00
186_L211_M1.0581.00
467_A496_A1.0571.00
529_Q566_D1.0571.00
389_E397_E1.0541.00
104_D108_N1.0531.00
129_Q134_L1.0491.00
244_K248_L1.0481.00
288_V293_D1.0461.00
245_N248_L1.0441.00
248_L252_W1.0441.00
128_S132_A1.0421.00
201_A217_N1.0421.00
252_W272_L1.0391.00
106_W110_L1.0371.00
342_G346_A1.0321.00
219_M223_L1.0291.00
271_V275_L1.0271.00
437_E440_A1.0261.00
568_R582_T1.0251.00
388_M397_E1.0251.00
74_I80_T1.0231.00
506_A579_V1.0231.00
331_K337_S1.0211.00
492_P583_F1.0191.00
388_M396_R1.0161.00
390_E395_A1.0151.00
388_M392_A1.0131.00
506_A581_V1.0131.00
190_S194_H1.0111.00
77_M80_T1.0091.00
526_N582_T1.0051.00
74_I78_E1.0021.00
100_Q105_Y0.9921.00
185_L189_A0.9921.00
291_T294_E0.9911.00
269_S272_L0.9901.00
502_I563_L0.9881.00
396_R405_S0.9871.00
385_L389_E0.9781.00
416_L431_L0.9741.00
263_P272_L0.9741.00
129_Q132_A0.9731.00
465_L521_V0.9731.00
299_E302_C0.9731.00
186_L215_A0.9701.00
273_N276_Q0.9701.00
188_M216_L0.9661.00
98_Q102_L0.9641.00
254_A272_L0.9631.00
75_K78_E0.9621.00
441_S446_R0.9601.00
541_V553_M0.9581.00
379_Q382_Q0.9581.00
472_Y504_R0.9551.00
329_T342_G0.9551.00
473_S478_F0.9501.00
241_L244_K0.9461.00
328_T333_R0.9451.00
81_A84_A0.9451.00
106_W109_E0.9441.00
560_A567_C0.9441.00
386_I404_Q0.9431.00
327_G349_P0.9431.00
398_L451_T0.9421.00
49_K52_S0.9411.00
406_L438_L0.9401.00
391_R396_R0.9401.00
346_A349_P0.9361.00
336_D340_Q0.9341.00
484_Y523_V0.9341.00
10_T13_N0.9311.00
389_E396_R0.9251.00
78_E81_A0.9171.00
390_E394_I0.9131.00
268_L272_L0.9081.00
344_L349_P0.9071.00
108_N111_I0.9051.00
411_M415_C0.9051.00
87_T90_A0.9011.00
330_L333_R0.8991.00
392_A397_E0.8981.00
74_I77_M0.8981.00
127_V134_L0.8941.00
106_W112_P0.8941.00
413_V435_R0.8931.00
397_E404_Q0.8911.00
461_L530_V0.8901.00
404_Q513_H0.8891.00
105_Y111_I0.8871.00
212_L219_M0.8871.00
128_S134_L0.8861.00
331_K348_L0.8861.00
252_W259_H0.8851.00
387_V390_E0.8841.00
329_T347_T0.8830.99
192_V195_R0.8820.99
390_E513_H0.8810.99
543_E572_R0.8800.99
465_L523_V0.8790.99
207_N213_G0.8770.99
541_V546_I0.8750.99
189_A215_A0.8730.99
99_L106_W0.8690.99
450_T498_H0.8660.99
45_H48_N0.8650.99
397_E441_S0.8650.99
487_P525_Q0.8640.99
413_V417_Q0.8640.99
413_V431_L0.8610.99
468_S500_L0.8520.99
224_A228_A0.8510.99
333_R342_G0.8490.99
332_W344_L0.8480.99
381_R384_Q0.8420.99
125_A128_S0.8410.99
282_R285_E0.8410.99
386_I394_I0.8400.99
397_E403_A0.8380.99
196_D199_Q0.8370.99
59_R63_A0.8350.99
447_E549_N0.8340.99
332_W342_G0.8320.99
392_A512_K0.8320.99
505_E549_N0.8310.99
216_L220_S0.8300.99
201_A213_G0.8300.99
408_C433_Q0.8280.99
50_A53_L0.8270.99
285_E288_V0.8260.99
410_K442_W0.8250.99
413_V438_L0.8230.99
291_T296_N0.8230.99
107_R112_P0.8230.99
103_Q107_R0.8210.99
262_A268_L0.8190.99
383_Q386_I0.8190.99
134_L141_F0.8170.99
409_M438_L0.8170.99
90_A95_Q0.8170.99
479_P482_L0.8160.99
176_A180_Q0.8160.99
403_A442_W0.8120.99
248_L251_L0.8120.99
332_W346_A0.8120.99
441_S450_T0.8100.99
125_A129_Q0.8090.99
437_E448_L0.8080.99
437_E449_L0.8070.99
342_G364_T0.8040.99
280_L285_E0.8030.99
331_K343_I0.8000.99
332_W340_Q0.7980.99
167_L171_I0.7960.99
438_L441_S0.7950.99
130_F133_G0.7930.99
42_G46_A0.7930.99
365_L368_Q0.7920.99
104_D107_R0.7910.99
129_Q133_G0.7890.99
327_G333_R0.7880.99
463_P467_A0.7880.99
451_T558_D0.7870.99
99_L107_R0.7870.99
190_S211_M0.7860.99
384_Q388_M0.7850.99
476_F480_V0.7840.99
213_G217_N0.7830.99
404_Q555_I0.7830.99
391_R398_L0.7820.99
434_I438_L0.7810.99
390_E404_Q0.7800.99
462_R484_Y0.7800.99
263_P266_E0.7790.99
404_Q411_M0.7780.99
506_A534_V0.7770.99
78_E84_A0.7770.99
78_E82_F0.7770.99
128_S131_V0.7760.99
389_E393_T0.7740.99
42_G45_H0.7740.99
32_V36_L0.7740.99
103_Q112_P0.7730.99
414_S435_R0.7720.99
396_R403_A0.7720.99
222_E225_E0.7700.99
276_Q282_R0.7690.99
488_P523_V0.7690.99
568_R581_V0.7690.99
188_M199_Q0.7660.99
565_G584_I0.7660.99
394_I398_L0.7650.99
462_R466_E0.7650.99
498_H502_I0.7630.99
44_A48_N0.7620.99
289_Y292_D0.7620.99
130_F136_Q0.7610.99
186_L190_S0.7600.98
490_L525_Q0.7600.98
293_D296_N0.7600.98
76_E80_T0.7590.98
98_Q107_R0.7560.98
395_A404_Q0.7560.98
175_R179_L0.7510.98
60_L64_V0.7500.98
387_V392_A0.7500.98
122_T126_D0.7500.98
103_Q106_W0.7480.98
394_I407_S0.7480.98
268_L275_L0.7470.98
99_L103_Q0.7470.98
449_L512_K0.7450.98
242_E246_Q0.7450.98
433_Q437_E0.7440.98
136_Q141_F0.7400.98
145_T149_I0.7390.98
296_N301_T0.7390.98
165_L169_F0.7380.98
132_A136_Q0.7380.98
396_R513_H0.7370.98
405_S441_S0.7370.98
76_E83_S0.7360.98
484_Y488_P0.7360.98
60_L63_A0.7350.98
100_Q106_W0.7350.98
33_S37_V0.7350.98
395_A398_L0.7340.98
34_G38_Q0.7340.98
397_E512_K0.7320.98
11_L178_L0.7300.98
466_E470_E0.7290.98
441_S448_L0.7270.98
448_L453_R0.7260.98
429_E433_Q0.7260.98
416_L434_I0.7250.98
387_V391_R0.7230.98
121_E124_S0.7230.98
102_L105_Y0.7230.98
76_E79_Q0.7210.98
390_E512_K0.7170.98
500_L504_R0.7170.98
397_E513_H0.7160.98
275_L279_T0.7160.98
391_R397_E0.7110.98
189_A193_S0.7110.98
407_S410_K0.7110.98
220_S223_L0.7100.98
99_L109_E0.7100.98
47_I50_A0.7070.98
227_Y230_L0.7070.98
388_M455_Q0.7060.98
272_L280_L0.7050.98
105_Y109_E0.7040.98
341_Y346_A0.7040.98
185_L213_G0.7040.98
408_C451_T0.7030.98
388_M394_I0.7030.98
340_Q343_I0.7010.97
425_E428_R0.7000.97
131_V134_L0.6970.97
387_V393_T0.6960.97
102_L106_W0.6950.97
396_R441_S0.6950.97
82_F85_E0.6930.97
386_I390_E0.6920.97
475_K478_F0.6920.97
468_S507_L0.6900.97
333_R336_D0.6900.97
78_E85_E0.6890.97
392_A454_L0.6890.97
394_I404_Q0.6890.97
263_P269_S0.6880.97
405_S555_I0.6860.97
390_E393_T0.6860.97
226_S230_L0.6850.97
451_T554_I0.6820.97
392_A513_H0.6810.97
327_G331_K0.6810.97
190_S218_N0.6800.97
465_L532_L0.6800.97
127_V130_F0.6780.97
424_P428_R0.6760.97
449_L549_N0.6710.97
546_I579_V0.6700.97
250_F253_Q0.6700.97
328_T332_W0.6690.97
86_L89_A0.6690.97
390_E403_A0.6680.97
421_D427_S0.6670.97
272_L284_I0.6660.97
28_A32_V0.6660.97
46_A50_A0.6650.97
79_Q83_S0.6640.96
468_S471_E0.6640.96
392_A501_Q0.6630.96
130_F135_D0.6630.96
261_R270_P0.6620.96
54_R58_Y0.6610.96
451_T513_H0.6610.96
388_M398_L0.6600.96
343_I348_L0.6580.96
271_V286_L0.6580.96
387_V394_I0.6580.96
87_T93_D0.6580.96
501_Q555_I0.6570.96
539_C577_T0.6570.96
478_F485_Q0.6560.96
438_L442_W0.6560.96
348_L364_T0.6560.96
332_W336_D0.6550.96
55_M59_R0.6530.96
47_I51_G0.6500.96
397_E557_R0.6490.96
503_A581_V0.6490.96
107_R111_I0.6490.96
382_Q397_E0.6480.96
404_Q512_K0.6470.96
122_T125_A0.6460.96
384_Q387_V0.6460.96
581_V584_I0.6450.96
473_S480_V0.6440.96
42_G50_A0.6430.96
87_T92_R0.6430.96
56_Q61_L0.6420.96
340_Q347_T0.6410.96
257_R348_L0.6410.96
328_T334_L0.6390.96
127_V133_G0.6380.96
260_S280_L0.6380.96
104_D109_E0.6370.96
298_Q302_C0.6370.96
100_Q103_Q0.6360.96
257_R274_G0.6330.95
386_I391_R0.6320.95
485_Q524_A0.6320.95
175_R178_L0.6320.95
329_T336_D0.6300.95
505_E556_M0.6300.95
528_N585_P0.6290.95
496_A500_L0.6280.95
127_V131_V0.6280.95
464_A468_S0.6270.95
394_I448_L0.6270.95
290_D296_N0.6260.95
103_Q108_N0.6250.95
102_L111_I0.6240.95
396_R454_L0.6230.95
287_R290_D0.6230.95
412_Q434_I0.6220.95
134_L138_V0.6210.95
419_Q427_S0.6200.95
419_Q430_L0.6200.95
331_K336_D0.6190.95
122_T128_S0.6170.95
523_V532_L0.6160.95
477_G484_Y0.6150.95
410_K413_V0.6140.95
258_L279_T0.6140.95
95_Q98_Q0.6140.95
102_L107_R0.6130.95
327_G336_D0.6130.95
383_Q394_I0.6130.95
437_E442_W0.6130.95
89_A93_D0.6130.95
197_F223_L0.6120.94
181_P208_E0.6110.94
272_L276_Q0.6110.94
445_L451_T0.6110.94
334_L340_Q0.6110.94
403_A412_Q0.6100.94
101_G106_W0.6100.94
98_Q109_E0.6100.94
261_R275_L0.6090.94
297_H300_F0.6090.94
490_L585_P0.6080.94
88_R93_D0.6080.94
293_D299_E0.6060.94
407_S412_Q0.6060.94
435_R439_N0.6060.94
107_R110_L0.6050.94
36_L39_G0.6050.94
103_Q109_E0.6040.94
441_S449_L0.6030.94
338_H343_I0.6020.94
436_N467_A0.6010.94
53_L57_S0.6010.94
397_E514_S0.6000.94
218_N222_E0.5990.94
101_G105_Y0.5990.94
121_E126_D0.5990.94
465_L482_L0.5980.94
98_Q106_W0.5980.94
551_Y555_I0.5970.94
403_A512_K0.5970.94
196_D200_R0.5960.94
533_T581_V0.5930.94
440_A444_Q0.5930.94
259_H263_P0.5910.93
75_K81_A0.5910.93
443_A447_E0.5890.93
513_H539_C0.5880.93
487_P490_L0.5870.93
392_A404_Q0.5860.93
403_A446_R0.5860.93
331_K335_A0.5850.93
43_S50_A0.5850.93
98_Q108_N0.5840.93
258_L275_L0.5830.93
80_T84_A0.5820.93
505_E548_S0.5820.93
341_Y347_T0.5820.93
292_D297_H0.5810.93
437_E441_S0.5810.93
133_G136_Q0.5790.93
132_A135_D0.5780.93
80_T83_S0.5770.93
406_L512_K0.5760.93
398_L412_Q0.5750.92
343_I349_P0.5740.92
293_D300_F0.5730.92
380_E407_S0.5730.92
99_L108_N0.5700.92
514_S539_C0.5700.92
404_Q408_C0.5690.92
225_E229_V0.5690.92
210_A213_G0.5680.92
329_T348_L0.5670.92
483_D524_A0.5660.92
19_V22_S0.5660.92
498_H562_S0.5650.92
100_Q107_R0.5650.92
444_Q452_F0.5630.92
393_T404_Q0.5610.92
331_K349_P0.5610.92
405_S445_L0.5600.91
54_R60_L0.5600.91
260_S266_E0.5600.91
391_R451_T0.5590.91
252_W255_N0.5590.91
485_Q522_T0.5590.91
469_C472_Y0.5590.91
252_W258_L0.5580.91
334_L341_Y0.5570.91
272_L288_V0.5540.91
56_Q59_R0.5530.91
403_A449_L0.5530.91
252_W261_R0.5520.91
58_Y62_A0.5520.91
106_W111_I0.5520.91
98_Q112_P0.5520.91
208_E213_G0.5520.91
330_L334_L0.5510.91
412_Q437_E0.5510.91
102_L108_N0.5510.91
49_K54_R0.5490.91
393_T452_F0.5480.91
332_W349_P0.5480.91
338_H347_T0.5470.91
181_P219_M0.5470.91
416_L433_Q0.5470.91
259_H266_E0.5460.90
223_L227_Y0.5460.90
441_S513_H0.5450.90
133_G141_F0.5450.90
98_Q103_Q0.5440.90
407_S411_M0.5440.90
240_G244_K0.5440.90
80_T85_E0.5440.90
391_R449_L0.5430.90
284_I287_R0.5430.90
498_H563_L0.5430.90
191_A199_Q0.5430.90
539_C571_R0.5420.90
31_A35_W0.5410.90
294_E298_Q0.5400.90
398_L404_Q0.5400.90
74_I81_A0.5400.90
420_G427_S0.5380.90
392_A514_S0.5380.90
380_E386_I0.5370.90
382_Q392_A0.5370.90
406_L412_Q0.5360.90
393_T398_L0.5360.90
252_W260_S0.5340.89
407_S437_E0.5330.89
268_L271_V0.5330.89
333_R346_A0.5320.89
407_S442_W0.5320.89
123_V126_D0.5310.89
411_M455_Q0.5310.89
567_C579_V0.5300.89
393_T430_L0.5300.89
404_Q551_Y0.5300.89
247_I270_P0.5290.89
213_G216_L0.5290.89
333_R343_I0.5290.89
174_L178_L0.5280.89
415_C430_L0.5270.89
386_I393_T0.5270.89
404_Q441_S0.5260.89
380_E384_Q0.5260.89
181_P207_N0.5250.89
295_E300_F0.5240.89
255_N258_L0.5230.88
261_R268_L0.5230.88
208_E212_L0.5210.88
36_L40_V0.5210.88
387_V396_R0.5200.88
333_R339_T0.5180.88
394_I441_S0.5170.88
143_R147_M0.5150.88
391_R395_A0.5150.88
405_S444_Q0.5150.88
330_L348_L0.5150.88
297_H301_T0.5150.88
137_L140_G0.5140.88
473_S519_V0.5140.88
390_E514_S0.5130.88
404_Q514_S0.5130.88
395_A437_E0.5130.88
295_E299_E0.5120.87
57_S64_V0.5110.87
380_E383_Q0.5100.87
382_Q396_R0.5090.87
414_S438_L0.5090.87
336_D339_T0.5090.87
336_D349_P0.5080.87
50_A54_R0.5080.87
396_R512_K0.5070.87
329_T334_L0.5070.87
105_Y110_L0.5070.87
396_R451_T0.5060.87
408_C411_M0.5060.87
387_V403_A0.5050.87
469_C482_L0.5040.87
405_S505_E0.5040.87
386_I389_E0.5030.87
384_Q390_E0.5030.87
288_V298_Q0.5020.86
71_K75_K0.5020.86
276_Q280_L0.5020.86
448_L500_L0.5020.86
99_L112_P0.5020.86
541_V579_V0.5010.86
240_G243_H0.5000.86
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4i5sA 2 0.612 100 0.468 Contact Map
4gczA 2 0.5836 100 0.562 Contact Map
3a0rA 2 0.5201 100 0.564 Contact Map
4r3aA 1 0.5084 100 0.624 Contact Map
4bixA 2 0.3495 100 0.627 Contact Map
4ctiA 2 0.3746 100 0.643 Contact Map
4r39A 1 0.3428 100 0.657 Contact Map
3d36A 2 0.3395 100 0.66 Contact Map
2c2aA 2 0.3579 100 0.663 Contact Map
4q20A 2 0.3478 100 0.666 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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