YJBB - ECOLI - GREMLIN Contacts

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YJBB - Uncharacterized protein YjbB

UniProt:	P0AF43	Sequences: MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVIYFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALANAARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEELAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRDEY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11919
Length:	543 (525)
Sequences:	1944 (1508)
Seq/√Len:	65.8

ECOLI - YJBB
BACSU - YQEW

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
98_R	277_Y	5.114	1.00
62_N	220_S	4.077	1.00
343_G	459_M	4.010	1.00
83_L	298_A	3.883	1.00
98_R	273_E	3.582	1.00
374_I	415_S	3.513	1.00
90_D	246_K	3.410	1.00
83_L	241_G	3.409	1.00
412_E	416_D	3.306	1.00
91_V	287_C	3.281	1.00
477_K	481_R	3.272	1.00
91_V	284_L	3.180	1.00
98_R	280_V	3.079	1.00
217_N	283_N	3.066	1.00
48_F	91_V	3.064	1.00
322_V	387_R	3.037	1.00
335_A	385_L	3.018	1.00
222_L	225_M	2.946	1.00
12_A	116_V	2.936	1.00
44_K	294_V	2.895	1.00
48_F	291_L	2.888	1.00
175_A	254_L	2.880	1.00
158_N	162_V	2.742	1.00
43_K	46_L	2.740	1.00
273_E	277_Y	2.660	1.00
220_S	223_L	2.619	1.00
477_K	521_S	2.611	1.00
214_I	250_S	2.587	1.00
341_R	377_L	2.577	1.00
8_L	113_F	2.577	1.00
12_A	113_F	2.573	1.00
477_K	517_Q	2.560	1.00
319_H	338_E	2.506	1.00
375_N	416_D	2.493	1.00
48_F	287_C	2.467	1.00
371_A	412_E	2.452	1.00
346_M	411_L	2.439	1.00
237_R	302_K	2.432	1.00
296_P	299_R	2.430	1.00
296_P	300_F	2.389	1.00
225_M	243_L	2.386	1.00
298_A	302_K	2.383	1.00
371_A	416_D	2.374	1.00
45_P	291_L	2.331	1.00
375_N	412_E	2.303	1.00
355_K	359_G	2.272	1.00
42_E	46_L	2.269	1.00
443_E	494_R	2.232	1.00
115_G	131_G	2.222	1.00
371_A	375_N	2.167	1.00
16_W	20_I	2.140	1.00
49_C	52_I	2.089	1.00
481_R	521_S	2.087	1.00
112_I	138_G	2.071	1.00
244_L	304_I	2.071	1.00
280_V	284_L	2.070	1.00
443_E	490_A	2.056	1.00
293_F	296_P	2.054	1.00
57_L	189_L	1.952	1.00
299_R	303_T	1.937	1.00
248_V	293_F	1.931	1.00
291_L	294_V	1.913	1.00
288_L	291_L	1.905	1.00
347_E	456_K	1.891	1.00
68_V	238_V	1.885	1.00
217_N	279_H	1.879	1.00
412_E	415_S	1.877	1.00
118_F	131_G	1.866	1.00
421_M	512_L	1.824	1.00
68_V	85_I	1.818	1.00
78_A	81_P	1.795	1.00
290_M	293_F	1.774	1.00
279_H	283_N	1.770	1.00
440_G	494_R	1.769	1.00
210_L	278_F	1.744	1.00
338_E	341_R	1.742	1.00
86_V	242_S	1.742	1.00
257_V	261_A	1.731	1.00
317_P	377_L	1.716	0.99
457_L	472_R	1.716	0.99
440_G	501_Q	1.714	0.99
445_D	449_E	1.705	0.99
440_G	491_H	1.703	0.99
336_A	400_R	1.703	0.99
185_S	220_S	1.701	0.99
437_S	494_R	1.700	0.99
195_T	212_L	1.679	0.99
481_R	517_Q	1.676	0.99
90_D	242_S	1.673	0.99
518_R	522_L	1.672	0.99
437_S	440_G	1.666	0.99
54_V	64_T	1.644	0.99
288_L	292_P	1.626	0.99
256_F	259_L	1.622	0.99
319_H	341_R	1.618	0.99
346_M	374_I	1.613	0.99
224_A	242_S	1.607	0.99
87_L	287_C	1.601	0.99
145_E	149_Q	1.591	0.99
220_S	242_S	1.588	0.99
87_L	290_M	1.585	0.99
102_F	273_E	1.584	0.99
407_M	526_V	1.572	0.99
303_T	306_R	1.564	0.99
252_I	289_V	1.560	0.99
67_L	71_F	1.560	0.99
242_S	246_K	1.546	0.99
19_H	23_T	1.545	0.99
368_R	427_D	1.545	0.99
357_M	445_D	1.523	0.99
255_P	259_L	1.521	0.99
196_A	276_I	1.517	0.99
240_L	305_I	1.514	0.99
112_I	142_L	1.513	0.99
124_Q	127_A	1.509	0.99
7_L	151_V	1.509	0.99
489_H	493_D	1.503	0.99
420_R	515_D	1.503	0.99
86_V	238_V	1.501	0.99
225_M	240_L	1.501	0.99
152_T	155_T	1.499	0.99
158_N	161_Q	1.496	0.99
354_N	358_H	1.495	0.99
487_Y	513_L	1.490	0.99
56_A	95_L	1.489	0.99
468_T	471_R	1.479	0.98
183_I	222_L	1.476	0.98
241_G	301_C	1.472	0.98
428_K	432_A	1.469	0.98
87_L	245_F	1.460	0.98
249_G	286_R	1.457	0.98
450_Q	476_S	1.455	0.98
470_A	531_L	1.446	0.98
440_G	443_E	1.445	0.98
410_N	525_S	1.436	0.98
335_A	404_I	1.436	0.98
480_F	520_N	1.416	0.98
449_E	453_S	1.404	0.98
454_N	520_N	1.404	0.98
517_Q	521_S	1.403	0.98
259_L	262_E	1.398	0.98
24_G	28_V	1.398	0.98
342_I	381_I	1.393	0.98
44_K	295_D	1.385	0.98
181_F	185_S	1.385	0.98
339_T	404_I	1.381	0.98
37_L	131_G	1.373	0.98
349_M	374_I	1.373	0.98
142_L	146_L	1.371	0.97
162_V	165_A	1.367	0.97
365_K	369_K	1.362	0.97
440_G	509_H	1.361	0.97
96_M	189_L	1.354	0.97
47_A	84_V	1.353	0.97
300_F	304_I	1.347	0.97
460_S	469_S	1.340	0.97
102_F	277_Y	1.332	0.97
361_P	365_K	1.329	0.97
62_N	222_L	1.327	0.97
460_S	464_S	1.317	0.97
98_R	101_T	1.312	0.97
223_L	242_S	1.311	0.97
410_N	417_I	1.302	0.97
27_R	132_R	1.300	0.97
58_V	189_L	1.299	0.97
188_S	279_H	1.287	0.96
65_T	242_S	1.284	0.96
413_Q	417_I	1.284	0.96
279_H	282_Y	1.280	0.96
461_V	470_A	1.280	0.96
233_A	305_I	1.279	0.96
122_R	127_A	1.279	0.96
118_F	134_G	1.259	0.96
281_F	285_V	1.252	0.96
233_A	306_R	1.252	0.96
259_L	264_M	1.250	0.96
434_R	505_T	1.245	0.96
438_L	441_L	1.245	0.96
10_A	14_L	1.244	0.96
174_D	195_T	1.241	0.95
98_R	276_I	1.241	0.95
319_H	377_L	1.237	0.95
144_L	197_T	1.234	0.95
517_Q	520_N	1.233	0.95
58_V	62_N	1.233	0.95
80_A	295_D	1.226	0.95
319_H	337_R	1.211	0.95
52_I	95_L	1.210	0.95
325_L	387_R	1.210	0.95
351_E	452_L	1.209	0.95
80_A	298_A	1.204	0.95
439_D	499_N	1.204	0.95
94_A	280_V	1.198	0.94
447_L	484_N	1.195	0.94
260_L	264_M	1.189	0.94
195_T	216_A	1.188	0.94
240_L	301_C	1.181	0.94
206_F	274_L	1.172	0.94
217_N	242_S	1.171	0.94
24_G	136_G	1.170	0.94
180_M	184_I	1.169	0.94
339_T	408_S	1.169	0.94
258_H	261_A	1.158	0.93
328_P	331_A	1.152	0.93
493_D	497_Q	1.150	0.93
83_L	294_V	1.147	0.93
182_A	282_Y	1.146	0.93
473_L	527_A	1.136	0.93
248_V	290_M	1.135	0.93
450_Q	479_R	1.130	0.93
375_N	428_K	1.129	0.93
94_A	223_L	1.127	0.92
413_Q	522_L	1.127	0.92
491_H	494_R	1.121	0.92
349_M	370_L	1.119	0.92
317_P	380_A	1.117	0.92
424_E	427_D	1.117	0.92
220_S	283_N	1.107	0.92
176_L	179_A	1.104	0.92
93_T	189_L	1.101	0.92
317_P	381_I	1.099	0.92
17_G	143_A	1.098	0.91
259_L	263_T	1.089	0.91
461_V	473_L	1.089	0.91
241_G	298_A	1.084	0.91
437_S	495_L	1.082	0.91
384_Y	388_M	1.082	0.91
301_C	304_I	1.077	0.91
285_V	289_V	1.070	0.90
65_T	235_A	1.070	0.90
11_V	160_V	1.066	0.90
205_S	208_V	1.065	0.90
223_L	283_N	1.064	0.90
103_D	106_W	1.061	0.90
77_V	177_I	1.055	0.90
10_A	143_A	1.054	0.90
360_E	363_Q	1.052	0.90
221_G	243_L	1.052	0.90
352_G	355_K	1.049	0.89
505_T	509_H	1.048	0.89
113_F	117_I	1.047	0.89
236_R	393_L	1.037	0.89
506_S	509_H	1.033	0.89
464_S	469_S	1.033	0.89
507_S	510_L	1.032	0.89
404_I	462_F	1.027	0.88
437_S	501_Q	1.025	0.88
348_Q	370_L	1.019	0.88
244_L	300_F	1.016	0.88
10_A	147_I	1.010	0.88
262_E	265_G	1.007	0.87
73_A	231_A	1.007	0.87
113_F	116_V	1.006	0.87
331_A	388_M	1.004	0.87
453_S	457_L	1.000	0.87
49_C	53_G	0.999	0.87
217_N	245_F	0.997	0.87
436_F	491_H	0.995	0.87
321_D	328_P	0.990	0.87
65_T	86_V	0.988	0.86
344_D	463_F	0.986	0.86
377_L	381_I	0.985	0.86
98_R	102_F	0.983	0.86
117_I	122_R	0.980	0.86
321_D	324_A	0.977	0.86
192_V	216_A	0.976	0.86
39_R	42_E	0.976	0.86
347_E	351_E	0.974	0.86
234_A	237_R	0.973	0.86
477_K	520_N	0.972	0.86
257_V	268_S	0.969	0.85
209_A	275_V	0.967	0.85
59_Q	189_L	0.966	0.85
23_T	26_M	0.965	0.85
439_D	442_K	0.965	0.85
116_V	121_G	0.965	0.85
438_L	442_K	0.963	0.85
87_L	246_K	0.960	0.85
491_H	501_Q	0.960	0.85
183_I	221_G	0.956	0.85
188_S	220_S	0.954	0.84
417_I	525_S	0.954	0.84
206_F	210_L	0.952	0.84
191_A	216_A	0.948	0.84
64_T	89_A	0.947	0.84
338_E	381_I	0.946	0.84
67_L	73_A	0.938	0.83
37_L	50_A	0.937	0.83
12_A	121_G	0.931	0.83
217_N	282_Y	0.928	0.83
62_N	189_L	0.927	0.83
270_P	273_E	0.926	0.83
437_S	491_H	0.923	0.82
420_R	481_R	0.919	0.82
9_S	235_A	0.918	0.82
122_R	128_G	0.916	0.82
440_G	502_S	0.916	0.82
95_L	189_L	0.915	0.82
87_L	249_G	0.909	0.82
94_A	220_S	0.907	0.81
217_N	224_A	0.906	0.81
350_M	519_L	0.905	0.81
192_V	213_V	0.904	0.81
20_I	139_L	0.904	0.81
258_H	262_E	0.902	0.81
255_P	258_H	0.901	0.81
343_G	458_A	0.900	0.81
366_E	369_K	0.899	0.81
175_A	250_S	0.898	0.81
356_V	512_L	0.894	0.80
64_T	175_A	0.889	0.80
417_I	522_L	0.886	0.80
126_R	288_L	0.885	0.80
104_L	107_L	0.879	0.79
24_G	37_L	0.879	0.79
510_L	513_L	0.878	0.79
221_G	224_A	0.878	0.79
74_Q	141_L	0.876	0.79
218_L	250_S	0.875	0.79
501_Q	506_S	0.874	0.79
89_A	238_V	0.872	0.79
233_A	307_D	0.872	0.79
417_I	515_D	0.871	0.79
55_T	64_T	0.866	0.78
327_T	330_L	0.863	0.78
233_A	308_E	0.861	0.78
65_T	224_A	0.851	0.77
24_G	132_R	0.848	0.77
72_V	238_V	0.848	0.77
62_N	186_Y	0.848	0.77
57_L	300_F	0.846	0.77
382_K	503_I	0.842	0.76
188_S	283_N	0.837	0.76
225_M	228_N	0.834	0.76
109_P	113_F	0.830	0.75
394_A	397_E	0.830	0.75
55_T	96_M	0.826	0.75
427_D	431_A	0.825	0.75
221_G	246_K	0.823	0.75
336_A	404_I	0.818	0.74
84_V	294_V	0.816	0.74
351_E	456_K	0.814	0.74
342_I	374_I	0.811	0.74
30_G	41_V	0.811	0.74
61_S	93_T	0.810	0.73
199_T	272_A	0.810	0.73
87_L	294_V	0.809	0.73
442_K	449_E	0.809	0.73
224_A	245_F	0.805	0.73
454_N	523_F	0.803	0.73
27_R	237_R	0.803	0.73
492_V	506_S	0.802	0.73
340_L	459_M	0.801	0.73
189_L	192_V	0.801	0.73
491_H	506_S	0.798	0.72
451_L	516_M	0.798	0.72
212_L	216_A	0.797	0.72
260_L	281_F	0.797	0.72
349_M	415_S	0.797	0.72
116_V	135_I	0.795	0.72
62_N	226_L	0.795	0.72
74_Q	282_Y	0.795	0.72
164_F	214_I	0.794	0.72
410_N	413_Q	0.794	0.72
131_G	190_A	0.793	0.72
413_Q	518_R	0.792	0.72
324_A	327_T	0.790	0.72
63_A	72_V	0.789	0.71
14_L	186_Y	0.789	0.71
90_D	217_N	0.788	0.71
94_A	98_R	0.787	0.71
204_I	209_A	0.787	0.71
5_L	157_A	0.782	0.71
318_K	341_R	0.781	0.71
161_Q	165_A	0.781	0.71
240_L	243_L	0.778	0.70
44_K	211_C	0.777	0.70
101_T	277_Y	0.774	0.70
5_L	110_L	0.773	0.70
329_T	397_E	0.772	0.70
359_G	429_S	0.772	0.70
10_A	150_A	0.771	0.70
16_W	119_F	0.768	0.69
66_M	224_A	0.768	0.69
159_G	162_V	0.765	0.69
41_V	85_I	0.764	0.69
71_F	76_L	0.764	0.69
118_F	127_A	0.763	0.69
91_V	217_N	0.763	0.69
18_T	76_L	0.763	0.69
59_Q	93_T	0.762	0.69
242_S	283_N	0.761	0.69
354_N	363_Q	0.761	0.69
256_F	433_R	0.760	0.69
467_V	531_L	0.760	0.69
110_L	280_V	0.756	0.68
185_S	191_A	0.756	0.68
213_V	216_A	0.756	0.68
197_T	201_A	0.756	0.68
48_F	52_I	0.755	0.68
216_A	290_M	0.754	0.68
24_G	153_P	0.752	0.68
85_I	113_F	0.752	0.68
137_L	143_A	0.752	0.68
172_L	396_E	0.751	0.68
385_L	404_I	0.751	0.68
243_L	247_L	0.750	0.68
180_M	284_L	0.748	0.67
371_A	415_S	0.748	0.67
140_I	147_I	0.746	0.67
55_T	58_V	0.745	0.67
491_H	498_Q	0.745	0.67
12_A	112_I	0.742	0.67
448_Y	516_M	0.741	0.67
130_L	296_P	0.741	0.67
438_L	499_N	0.739	0.66
174_D	212_L	0.737	0.66
79_L	82_A	0.736	0.66
341_R	345_A	0.735	0.66
97_A	192_V	0.734	0.66
44_K	47_A	0.733	0.66
119_F	132_R	0.733	0.66
444_L	448_Y	0.733	0.66
119_F	135_I	0.733	0.66
7_L	150_A	0.732	0.66
77_V	81_P	0.731	0.66
62_N	224_A	0.731	0.66
6_H	149_Q	0.730	0.66
507_S	523_F	0.729	0.65
24_G	33_L	0.729	0.65
345_A	370_L	0.728	0.65
87_L	286_R	0.727	0.65
406_E	522_L	0.726	0.65
441_L	445_D	0.724	0.65
71_F	280_V	0.724	0.65
416_D	511_G	0.724	0.65
458_A	523_F	0.723	0.65
176_L	180_M	0.723	0.65
190_A	283_N	0.722	0.65
163_I	173_L	0.722	0.65
89_A	95_L	0.720	0.64
460_S	463_F	0.720	0.64
108_S	142_L	0.720	0.64
144_L	193_L	0.718	0.64
223_L	246_K	0.716	0.64
302_K	306_R	0.713	0.64
290_M	297_M	0.712	0.64
346_M	515_D	0.712	0.64
63_A	71_F	0.712	0.64
375_N	415_S	0.711	0.63
524_C	528_Y	0.711	0.63
164_F	167_L	0.710	0.63
447_L	454_N	0.708	0.63
264_M	268_S	0.707	0.63
273_E	280_V	0.705	0.63
213_V	253_I	0.701	0.62
284_L	288_L	0.701	0.62
109_P	142_L	0.701	0.62
259_L	266_K	0.700	0.62
33_L	393_L	0.700	0.62
442_K	445_D	0.699	0.62
231_A	236_R	0.696	0.62
501_Q	509_H	0.695	0.62
251_L	255_P	0.694	0.62
253_I	285_V	0.692	0.61
342_I	378_Y	0.692	0.61
457_L	476_S	0.691	0.61
29_F	65_T	0.689	0.61
457_L	469_S	0.688	0.61
99_I	192_V	0.686	0.61
175_A	179_A	0.684	0.60
443_E	491_H	0.683	0.60
83_L	99_I	0.682	0.60
6_H	151_V	0.682	0.60
69_T	72_V	0.682	0.60
16_W	132_R	0.682	0.60
94_A	276_I	0.681	0.60
149_Q	152_T	0.679	0.60
89_A	189_L	0.679	0.60
55_T	223_L	0.678	0.60
140_I	143_A	0.674	0.59
317_P	320_L	0.673	0.59
258_H	268_S	0.672	0.59
451_L	523_F	0.671	0.59
179_A	218_L	0.670	0.59
100_L	276_I	0.670	0.59
118_F	122_R	0.670	0.59
325_L	388_M	0.668	0.59
73_A	151_V	0.668	0.59
491_H	509_H	0.668	0.59
237_R	306_R	0.667	0.59
363_Q	478_H	0.666	0.58
302_K	308_E	0.665	0.58
381_I	408_S	0.665	0.58
78_A	82_A	0.664	0.58
216_A	286_R	0.664	0.58
63_A	67_L	0.662	0.58
265_G	268_S	0.661	0.58
242_S	282_Y	0.661	0.58
78_A	83_L	0.660	0.58
26_M	183_I	0.660	0.58
349_M	418_V	0.659	0.58
452_L	456_K	0.658	0.58
318_K	377_L	0.658	0.58
295_D	298_A	0.658	0.58
440_G	505_T	0.657	0.57
35_T	39_R	0.657	0.57
321_D	331_A	0.655	0.57
484_N	488_S	0.653	0.57
131_G	134_G	0.652	0.57
216_A	220_S	0.652	0.57
389_P	511_G	0.651	0.57
332_L	401_W	0.650	0.57
100_L	196_A	0.650	0.57
303_T	366_E	0.649	0.56
15_V	244_L	0.647	0.56
320_L	376_V	0.647	0.56
41_V	77_V	0.647	0.56
9_S	405_I	0.645	0.56
73_A	234_A	0.645	0.56
426_A	512_L	0.642	0.56
420_R	477_K	0.642	0.56
48_F	87_L	0.642	0.56
22_R	73_A	0.642	0.56
22_R	189_L	0.642	0.56
47_A	465_G	0.641	0.56
55_T	90_D	0.640	0.55
355_K	367_L	0.639	0.55
64_T	238_V	0.639	0.55
32_R	35_T	0.639	0.55
376_V	380_A	0.638	0.55
475_R	486_R	0.638	0.55
352_G	418_V	0.638	0.55
44_K	291_L	0.638	0.55
91_V	94_A	0.637	0.55
221_G	242_S	0.635	0.55
109_P	243_L	0.635	0.55
71_F	151_V	0.635	0.55
255_P	264_M	0.631	0.54
90_D	283_N	0.630	0.54
335_A	381_I	0.630	0.54
482_I	486_R	0.629	0.54
359_G	364_E	0.627	0.54
18_T	227_N	0.626	0.54
487_Y	509_H	0.626	0.54
52_I	287_C	0.625	0.54
246_K	286_R	0.625	0.54
114_I	118_F	0.624	0.54
450_Q	483_L	0.623	0.53
66_M	282_Y	0.623	0.53
411_L	462_F	0.621	0.53
54_V	102_F	0.618	0.53
13_L	146_L	0.618	0.53
73_A	202_G	0.618	0.53
445_D	452_L	0.618	0.53
48_F	64_T	0.617	0.53
268_S	277_Y	0.616	0.53
192_V	196_A	0.616	0.53
299_R	302_K	0.616	0.53
301_C	306_R	0.613	0.52
473_L	523_F	0.613	0.52
214_I	249_G	0.612	0.52
188_S	217_N	0.611	0.52
509_H	517_Q	0.611	0.52
97_A	140_I	0.610	0.52
251_L	308_E	0.609	0.52
451_L	480_F	0.609	0.52
101_T	276_I	0.609	0.52
186_Y	223_L	0.608	0.52
183_I	194_L	0.607	0.52
56_A	189_L	0.606	0.51
220_S	250_S	0.606	0.51
263_T	268_S	0.605	0.51
24_G	62_N	0.604	0.51
247_L	251_L	0.603	0.51
171_I	211_C	0.603	0.51
94_A	217_N	0.601	0.51
105_S	304_I	0.601	0.51
364_E	427_D	0.601	0.51
342_I	416_D	0.600	0.51
100_L	193_L	0.600	0.51
487_Y	529_S	0.599	0.51
21_V	29_F	0.598	0.51
86_V	246_K	0.598	0.51
82_A	103_D	0.598	0.51
59_Q	188_S	0.597	0.50
96_M	99_I	0.596	0.50
337_R	344_D	0.595	0.50
185_S	194_L	0.594	0.50
181_F	216_A	0.594	0.50
447_L	487_Y	0.594	0.50
178_G	186_Y	0.592	0.50
188_S	223_L	0.592	0.50
83_L	512_L	0.592	0.50
9_S	12_A	0.591	0.50
420_R	424_E	0.590	0.50
442_K	446_A	0.589	0.49
58_V	140_I	0.589	0.49
317_P	341_R	0.588	0.49
112_I	120_L	0.588	0.49
41_V	186_Y	0.588	0.49
27_R	385_L	0.586	0.49
439_D	497_Q	0.586	0.49
268_S	274_L	0.585	0.49
41_V	66_M	0.585	0.49
320_L	331_A	0.584	0.49
321_D	325_L	0.584	0.49
471_R	475_R	0.581	0.49
186_Y	189_L	0.581	0.49
47_A	290_M	0.581	0.49
26_M	338_E	0.581	0.49
64_T	185_S	0.580	0.48
86_V	90_D	0.579	0.48
210_L	261_A	0.578	0.48
347_E	452_L	0.577	0.48
105_S	197_T	0.577	0.48
271_K	274_L	0.577	0.48
13_L	142_L	0.576	0.48
204_I	529_S	0.576	0.48
340_L	463_F	0.576	0.48
199_T	274_L	0.575	0.48
475_R	478_H	0.575	0.48
63_A	137_L	0.575	0.48
397_E	400_R	0.574	0.48
477_K	527_A	0.573	0.48
73_A	334_N	0.573	0.48
149_Q	251_L	0.573	0.48
108_S	138_G	0.571	0.47
122_R	180_M	0.570	0.47
436_F	440_G	0.570	0.47
68_V	82_A	0.569	0.47
43_K	281_F	0.569	0.47
321_D	327_T	0.568	0.47
317_P	338_E	0.568	0.47
196_A	272_A	0.568	0.47
295_D	299_R	0.567	0.47
512_L	516_M	0.567	0.47
444_L	447_L	0.567	0.47
164_F	204_I	0.567	0.47
333_A	336_A	0.566	0.47
65_T	245_F	0.566	0.47
367_L	422_G	0.565	0.47
100_L	190_A	0.565	0.47
417_I	518_R	0.565	0.47
66_M	223_L	0.563	0.46
17_G	55_T	0.563	0.46
474_R	528_Y	0.562	0.46
417_I	420_R	0.561	0.46
258_H	266_K	0.561	0.46
225_M	229_S	0.561	0.46
372_D	427_D	0.560	0.46
94_A	279_H	0.559	0.46
142_L	400_R	0.559	0.46
16_W	453_S	0.558	0.46
79_L	238_V	0.558	0.46
484_N	487_Y	0.558	0.46
370_L	374_I	0.557	0.46
204_I	262_E	0.557	0.46
466_D	470_A	0.557	0.46
244_L	438_L	0.556	0.46
155_T	201_A	0.556	0.46
199_T	271_K	0.556	0.46
375_N	511_G	0.556	0.46
77_V	85_I	0.555	0.45
352_G	356_V	0.555	0.45
262_E	266_K	0.554	0.45
368_R	419_E	0.554	0.45
85_I	252_I	0.554	0.45
147_I	221_G	0.553	0.45
343_G	411_L	0.553	0.45
29_F	41_V	0.552	0.45
103_D	224_A	0.552	0.45
90_D	188_S	0.552	0.45
183_I	189_L	0.551	0.45
128_G	299_R	0.551	0.45
277_Y	280_V	0.550	0.45
69_T	87_L	0.550	0.45
69_T	151_V	0.550	0.45
262_E	268_S	0.550	0.45
322_V	325_L	0.549	0.45
494_R	509_H	0.547	0.45
34_R	199_T	0.546	0.44
58_V	327_T	0.545	0.44
119_F	139_L	0.545	0.44
101_T	280_V	0.544	0.44
494_R	501_Q	0.544	0.44
22_R	174_D	0.544	0.44
256_F	261_A	0.543	0.44
378_Y	408_S	0.543	0.44
256_F	266_K	0.543	0.44
55_T	88_G	0.543	0.44
259_L	268_S	0.542	0.44
371_A	521_S	0.542	0.44
66_M	69_T	0.542	0.44
112_I	524_C	0.540	0.44
130_L	444_L	0.540	0.44
121_G	127_A	0.539	0.44
178_G	421_M	0.538	0.43
458_A	462_F	0.537	0.43
34_R	144_L	0.537	0.43
118_F	124_Q	0.537	0.43
28_V	112_I	0.536	0.43
65_T	87_L	0.536	0.43
69_T	228_N	0.536	0.43
53_G	56_A	0.535	0.43
467_V	471_R	0.535	0.43
385_L	480_F	0.535	0.43
249_G	287_C	0.533	0.43
151_V	335_A	0.532	0.43
273_E	278_F	0.531	0.43
425_I	508_L	0.531	0.43
190_A	193_L	0.530	0.43
22_R	70_S	0.530	0.43
62_N	185_S	0.530	0.43
256_F	263_T	0.529	0.42
378_Y	382_K	0.528	0.42
5_L	111_L	0.528	0.42
245_F	283_N	0.527	0.42
22_R	54_V	0.527	0.42
444_L	449_E	0.525	0.42
93_T	292_P	0.525	0.42
28_V	130_L	0.524	0.42
424_E	458_A	0.524	0.42
373_D	377_L	0.524	0.42
213_V	217_N	0.524	0.42
111_L	137_L	0.523	0.42
31_A	34_R	0.523	0.42
275_V	283_N	0.523	0.42
57_L	384_Y	0.523	0.42
97_A	189_L	0.522	0.42
25_V	146_L	0.522	0.42
55_T	61_S	0.521	0.42
144_L	231_A	0.521	0.42
474_R	524_C	0.521	0.42
478_H	524_C	0.521	0.42
18_T	280_V	0.521	0.42
6_H	16_W	0.521	0.42
23_T	132_R	0.521	0.42
157_A	161_Q	0.520	0.41
114_I	394_A	0.520	0.41
174_D	196_A	0.520	0.41
73_A	235_A	0.519	0.41
368_R	422_G	0.519	0.41
382_K	386_A	0.518	0.41
138_G	141_L	0.518	0.41
70_S	323_S	0.517	0.41
390_K	393_L	0.517	0.41
176_L	339_T	0.516	0.41
180_M	493_D	0.516	0.41
52_I	85_I	0.516	0.41
251_L	288_L	0.515	0.41
339_T	343_G	0.515	0.41
117_I	396_E	0.515	0.41
269_L	272_A	0.515	0.41
371_A	417_I	0.513	0.41
26_M	143_A	0.513	0.41
331_A	384_Y	0.512	0.41
355_K	360_E	0.512	0.41
224_A	246_K	0.512	0.41
303_T	307_D	0.511	0.40
101_T	300_F	0.511	0.40
420_R	521_S	0.511	0.40
188_S	246_K	0.511	0.40
171_I	195_T	0.511	0.40
91_V	252_I	0.510	0.40
71_F	231_A	0.510	0.40
102_F	192_V	0.509	0.40
441_L	449_E	0.509	0.40
200_A	360_E	0.509	0.40
96_M	100_L	0.509	0.40
176_L	478_H	0.508	0.40
40_S	144_L	0.508	0.40
7_L	409_L	0.507	0.40
116_V	243_L	0.507	0.40
468_T	480_F	0.506	0.40
491_H	525_S	0.506	0.40
37_L	41_V	0.505	0.40
94_A	283_N	0.504	0.40
108_S	199_T	0.504	0.40
190_A	321_D	0.504	0.40
515_D	521_S	0.503	0.39
14_L	143_A	0.503	0.39
250_S	279_H	0.502	0.39
47_A	203_I	0.502	0.39
28_V	133_V	0.501	0.39
414_A	455_L	0.501	0.39
506_S	522_L	0.501	0.39
150_A	353_L	0.500	0.39

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4q25A	2	0.3849	100	0.805	Contact Map
1sumB	2	0.3941	100	0.811	Contact Map
1xwmA	2	0.3867	100	0.815	Contact Map
2i0mA	2	0.3775	100	0.816	Contact Map
1t72A	5	0.3923	99.9	0.821	Contact Map
2oltA	5	0.3646	99.7	0.875	Contact Map
3l39A	3	0.3738	99.2	0.907	Contact Map
1vctA	3	0.1971	75.5	0.97	Contact Map
4f35D	2	0.3959	73.9	0.97	Contact Map
3j9tb	1	0.2063	47.6	0.975	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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