FTSI - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

FTSI - Peptidoglycan synthase FtsI

UniProt:	P0AD68	Sequences: MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10341
Length:	588 (501)
Sequences:	15867 (11193)
Seq/√Len:	500.1

ECOLI - FTSI PBP2 PBPC PBPB PBPA
BACSU - SP5D PBPB YQGF PBPC PBPH PBPI PBPA PBPG PBPF PBPD

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
264_L	528_L	3.323	1.00
516_A	529_V	3.322	1.00
202_G	211_K	3.278	1.00
468_V	518_V	3.215	1.00
262_A	553_I	3.129	1.00
429_A	529_V	3.102	1.00
193_E	203_Q	3.010	1.00
271_E	444_L	2.981	1.00
271_E	447_T	2.916	1.00
320_R	375_A	2.852	1.00
353_T	473_S	2.793	1.00
267_V	527_A	2.713	1.00
244_V	262_A	2.697	1.00
248_L	260_G	2.650	1.00
328_V	349_E	2.583	1.00
75_T	231_N	2.577	1.00
472_E	490_R	2.566	1.00
350_L	360_S	2.534	1.00
266_D	269_T	2.495	1.00
233_A	448_K	2.488	1.00
493_I	515_T	2.449	1.00
353_T	469_H	2.428	1.00
319_Q	463_I	2.427	1.00
77_R	237_D	2.332	1.00
354_G	358_K	2.320	1.00
100_D	104_I	2.312	1.00
264_L	553_I	2.292	1.00
378_D	382_R	2.288	1.00
266_D	271_E	2.287	1.00
551_G	555_G	2.259	1.00
430_R	440_I	2.232	1.00
355_V	363_G	2.175	1.00
75_T	233_A	2.173	1.00
73_M	81_P	2.162	1.00
335_R	340_E	2.151	1.00
312_M	431_V	2.139	1.00
243_L	556_G	2.117	1.00
247_E	552_A	2.103	1.00
76_D	80_R	2.096	1.00
357_Q	473_S	2.066	1.00
250_N	552_A	2.062	1.00
265_V	429_A	2.047	1.00
354_G	357_Q	2.036	1.00
324_R	327_S	2.017	1.00
330_N	349_E	2.010	1.00
77_R	273_L	1.991	1.00
327_S	370_A	1.958	1.00
316_T	379_T	1.950	1.00
273_L	526_F	1.943	1.00
309_V	380_Y	1.941	1.00
197_D	201_T	1.921	1.00
266_D	525_R	1.908	1.00
73_M	231_N	1.907	1.00
375_A	378_D	1.904	1.00
77_R	271_E	1.902	1.00
351_T	354_G	1.897	1.00
242_A	246_R	1.894	1.00
268_N	525_R	1.892	1.00
315_M	463_I	1.876	1.00
240_L	557_V	1.862	1.00
347_Y	360_S	1.857	1.00
193_E	204_P	1.857	1.00
319_Q	460_P	1.812	1.00
144_N	147_M	1.808	1.00
472_E	476_L	1.808	1.00
41_R	44_W	1.806	1.00
244_V	553_I	1.803	1.00
460_P	463_I	1.796	1.00
526_F	557_V	1.788	1.00
430_R	443_P	1.775	1.00
258_E	534_D	1.774	1.00
438_Y	465_R	1.773	1.00
94_D	97_E	1.769	1.00
240_L	273_L	1.768	1.00
459_F	464_V	1.768	1.00
243_L	247_E	1.764	1.00
492_A	518_V	1.762	1.00
461_E	465_R	1.759	1.00
368_A	416_S	1.738	1.00
233_A	447_T	1.731	1.00
266_D	273_L	1.727	1.00
550_F	554_M	1.717	1.00
245_Y	276_A	1.714	1.00
438_Y	461_E	1.714	1.00
244_V	274_A	1.700	1.00
262_A	530_V	1.699	1.00
264_L	526_F	1.694	1.00
212_D	216_R	1.687	1.00
425_P	529_V	1.685	1.00
517_G	550_F	1.676	1.00
81_P	84_V	1.665	1.00
123_Q	126_A	1.659	1.00
315_M	459_F	1.652	1.00
433_A	527_A	1.644	1.00
170_P	173_E	1.616	1.00
265_V	443_P	1.615	1.00
432_Y	471_M	1.604	1.00
315_M	383_F	1.598	1.00
366_K	370_A	1.591	1.00
350_L	354_G	1.590	1.00
469_H	472_E	1.590	1.00
530_V	550_F	1.587	1.00
311_P	435_I	1.577	1.00
80_R	238_E	1.556	1.00
196_F	232_L	1.554	1.00
183_N	189_I	1.547	1.00
95_P	103_G	1.545	1.00
305_P	423_V	1.544	1.00
102_G	192_V	1.531	1.00
114_A	172_G	1.531	1.00
344_V	541_Y	1.523	1.00
473_S	477_P	1.523	1.00
263_V	426_L	1.522	1.00
457_R	461_E	1.500	1.00
319_Q	382_R	1.496	1.00
476_L	485_A	1.495	1.00
343_D	360_S	1.493	1.00
295_R	301_D	1.490	1.00
368_A	376_L	1.489	1.00
438_Y	468_V	1.474	1.00
517_G	554_M	1.473	1.00
385_L	423_V	1.466	1.00
80_R	239_R	1.465	1.00
532_I	549_V	1.461	1.00
100_D	103_G	1.452	1.00
272_V	445_S	1.452	1.00
248_L	276_A	1.449	1.00
377_V	381_S	1.446	1.00
432_Y	516_A	1.439	1.00
329_L	370_A	1.434	1.00
323_V	352_L	1.432	1.00
95_P	176_A	1.427	1.00
235_S	271_E	1.420	1.00
356_L	470_M	1.405	1.00
355_V	364_V	1.403	1.00
246_R	556_G	1.395	1.00
435_I	467_V	1.388	1.00
475_A	493_I	1.382	1.00
331_T	360_S	1.378	1.00
249_N	278_S	1.373	1.00
240_L	274_A	1.366	1.00
314_V	364_V	1.363	1.00
308_T	428_L	1.361	1.00
434_T	440_I	1.358	1.00
125_S	129_N	1.355	1.00
475_A	491_I	1.348	1.00
436_G	492_A	1.344	1.00
111_K	121_L	1.342	1.00
120_P	123_Q	1.332	1.00
103_G	172_G	1.325	1.00
317_A	367_L	1.321	1.00
121_L	125_S	1.320	1.00
325_E	470_M	1.316	1.00
500_K	533_N	1.313	1.00
101_A	104_I	1.313	1.00
315_M	467_V	1.310	1.00
357_Q	477_P	1.305	1.00
335_R	338_G	1.302	1.00
436_G	518_V	1.298	1.00
428_L	516_A	1.296	1.00
263_V	425_P	1.291	1.00
318_L	470_M	1.291	1.00
265_V	527_A	1.288	1.00
262_A	528_L	1.287	1.00
106_V	114_A	1.278	1.00
486_I	551_G	1.277	1.00
320_R	379_T	1.276	1.00
49_S	52_M	1.265	1.00
437_S	441_Y	1.260	1.00
95_P	172_G	1.254	1.00
69_T	204_P	1.254	1.00
239_R	560_T	1.251	1.00
73_M	84_V	1.249	1.00
40_G	44_W	1.247	1.00
556_G	559_R	1.244	1.00
383_F	459_F	1.242	1.00
101_A	212_D	1.241	1.00
244_V	276_A	1.240	1.00
97_E	205_G	1.239	1.00
519_A	558_L	1.239	1.00
265_V	433_A	1.236	1.00
325_E	466_T	1.236	1.00
440_I	456_E	1.234	1.00
323_V	327_S	1.232	1.00
130_A	138_Y	1.232	1.00
528_L	553_I	1.227	1.00
112_A	115_N	1.227	1.00
465_R	468_V	1.221	1.00
374_S	378_D	1.216	1.00
342_K	346_R	1.208	1.00
235_S	444_L	1.205	1.00
369_L	413_A	1.198	1.00
297_R	535_P	1.195	1.00
352_L	363_G	1.188	1.00
43_A	47_V	1.186	1.00
379_T	382_R	1.174	1.00
528_L	554_M	1.172	1.00
75_T	81_P	1.161	1.00
334_Y	369_L	1.161	1.00
251_A	549_V	1.151	1.00
189_I	198_K	1.144	1.00
171_S	238_E	1.143	1.00
315_M	379_T	1.142	1.00
275_M	298_T	1.142	1.00
252_V	260_G	1.140	1.00
347_Y	358_K	1.140	1.00
474_V	481_G	1.139	1.00
263_V	429_A	1.138	1.00
381_S	387_K	1.136	1.00
558_L	561_M	1.131	1.00
114_A	117_L	1.130	1.00
468_V	492_A	1.129	1.00
41_R	45_L	1.123	1.00
428_L	514_Y	1.116	1.00
248_L	262_A	1.106	1.00
314_V	352_L	1.105	1.00
246_R	250_N	1.103	1.00
473_S	476_L	1.103	1.00
110_W	114_A	1.103	1.00
112_A	120_P	1.100	1.00
429_A	527_A	1.098	1.00
372_P	375_A	1.098	1.00
362_V	366_K	1.093	1.00
140_A	147_M	1.089	1.00
331_T	343_D	1.085	1.00
169_Y	177_H	1.081	1.00
264_L	557_V	1.075	1.00
315_M	435_I	1.074	1.00
475_A	515_T	1.073	1.00
91_I	143_V	1.068	1.00
112_A	116_A	1.068	1.00
123_Q	127_R	1.066	1.00
178_L	236_I	1.064	1.00
462_S	466_T	1.057	1.00
435_I	468_V	1.057	1.00
322_V	370_A	1.053	1.00
320_R	371_M	1.052	1.00
267_V	526_F	1.051	1.00
319_Q	379_T	1.050	1.00
263_V	275_M	1.048	1.00
125_S	128_I	1.048	1.00
243_L	246_R	1.046	1.00
76_D	238_E	1.044	1.00
311_P	471_M	1.043	1.00
116_A	166_R	1.041	1.00
275_M	296_N	1.040	1.00
441_Y	455_G	1.039	1.00
318_L	466_T	1.035	1.00
382_R	456_E	1.032	1.00
379_T	383_F	1.031	1.00
99_H	204_P	1.031	1.00
464_V	468_V	1.020	1.00
530_V	549_V	1.019	1.00
500_K	534_D	1.017	1.00
350_L	358_K	1.017	1.00
102_G	212_D	1.016	1.00
513_A	542_G	1.015	1.00
552_A	555_G	1.014	1.00
311_P	432_Y	1.014	1.00
360_S	363_G	1.013	1.00
491_I	519_A	1.012	1.00
350_L	363_G	1.010	1.00
267_V	433_A	1.006	1.00
312_M	380_Y	1.004	1.00
238_E	242_A	1.001	1.00
203_Q	227_Q	0.998	1.00
247_E	549_V	0.995	1.00
423_V	428_L	0.991	1.00
352_L	367_L	0.990	1.00
436_G	527_A	0.990	1.00
312_M	383_F	0.989	1.00
239_R	242_A	0.985	1.00
353_T	470_M	0.984	1.00
315_M	464_V	0.984	1.00
542_G	547_A	0.982	1.00
95_P	98_V	0.980	1.00
347_Y	350_L	0.979	1.00
247_E	556_G	0.979	1.00
183_N	188_G	0.978	1.00
419_Y	499_K	0.976	1.00
313_V	416_S	0.973	1.00
199_W	230_H	0.971	1.00
110_W	113_L	0.970	1.00
378_D	381_S	0.966	1.00
172_G	282_N	0.963	1.00
323_V	367_L	0.961	1.00
375_A	379_T	0.960	1.00
365_S	417_F	0.960	1.00
302_V	422_M	0.957	1.00
482_V	485_A	0.956	1.00
133_K	137_I	0.956	1.00
44_W	49_S	0.953	1.00
247_E	250_N	0.947	1.00
52_M	56_E	0.946	1.00
477_P	482_V	0.943	1.00
532_I	546_S	0.942	1.00
513_A	540_Y	0.942	1.00
117_L	121_L	0.940	1.00
408_S	411_E	0.939	1.00
332_I	366_K	0.937	1.00
329_L	363_G	0.935	1.00
514_Y	531_V	0.931	1.00
260_G	532_I	0.930	1.00
203_Q	206_E	0.929	1.00
430_R	442_R	0.927	1.00
446_I	449_V	0.924	1.00
126_A	138_Y	0.924	1.00
385_L	431_V	0.918	1.00
107_G	110_W	0.917	1.00
311_P	356_L	0.917	1.00
240_L	264_L	0.917	1.00
313_V	376_L	0.916	1.00
261_S	425_P	0.916	1.00
525_R	564_E	0.914	1.00
79_G	233_A	0.908	1.00
265_V	430_R	0.906	1.00
334_Y	366_K	0.903	1.00
425_P	429_A	0.901	1.00
261_S	298_T	0.899	1.00
43_A	48_I	0.899	1.00
267_V	436_G	0.897	1.00
192_V	196_F	0.896	1.00
113_L	117_L	0.894	1.00
525_R	561_M	0.893	1.00
543_G	547_A	0.893	1.00
414_T	419_Y	0.887	1.00
244_V	264_L	0.886	1.00
528_L	550_F	0.884	1.00
468_V	471_M	0.884	1.00
386_G	427_Q	0.882	1.00
133_K	136_F	0.879	1.00
275_M	445_S	0.878	1.00
481_G	495_T	0.874	1.00
379_T	459_F	0.874	1.00
93_A	98_V	0.871	1.00
275_M	299_I	0.870	1.00
173_E	176_A	0.867	1.00
519_A	554_M	0.864	1.00
296_N	299_I	0.864	1.00
318_L	463_I	0.864	1.00
143_V	147_M	0.859	1.00
331_T	347_Y	0.857	1.00
387_K	427_Q	0.856	1.00
513_A	546_S	0.855	1.00
463_I	466_T	0.854	1.00
114_A	120_P	0.853	1.00
33_L	37_F	0.853	1.00
328_V	351_T	0.850	1.00
466_T	469_H	0.845	1.00
182_T	219_E	0.844	1.00
245_Y	249_N	0.843	1.00
259_S	297_R	0.843	1.00
192_V	234_L	0.843	1.00
512_I	531_V	0.840	1.00
121_L	124_L	0.838	1.00
489_Y	525_R	0.838	1.00
175_T	178_L	0.837	1.00
526_F	561_M	0.836	1.00
36_A	40_G	0.836	1.00
368_A	373_S	0.835	1.00
32_L	36_A	0.835	1.00
414_T	420_G	0.832	1.00
263_V	529_V	0.830	1.00
25_A	29_G	0.830	1.00
475_A	481_G	0.830	1.00
329_L	366_K	0.829	1.00
317_A	323_V	0.829	1.00
463_I	467_V	0.824	1.00
442_R	453_V	0.822	1.00
175_T	236_I	0.820	1.00
490_R	563_I	0.820	1.00
78_S	237_D	0.819	1.00
438_Y	464_V	0.819	1.00
376_L	380_Y	0.819	1.00
235_S	447_T	0.817	1.00
356_L	471_M	0.816	1.00
481_G	484_A	0.812	1.00
343_D	346_R	0.810	1.00
147_M	150_Y	0.809	1.00
464_V	467_V	0.808	1.00
251_A	552_A	0.808	1.00
262_A	549_V	0.805	1.00
98_V	102_G	0.804	1.00
469_H	473_S	0.801	1.00
312_M	428_L	0.797	1.00
171_S	174_V	0.797	1.00
252_V	278_S	0.795	1.00
90_A	164_E	0.795	1.00
148_A	165_S	0.792	1.00
554_M	558_L	0.792	1.00
43_A	46_Q	0.791	1.00
385_L	428_L	0.790	1.00
428_L	529_V	0.789	1.00
103_G	114_A	0.786	1.00
74_I	85_S	0.786	1.00
484_A	547_A	0.785	1.00
119_I	159_I	0.784	1.00
109_R	114_A	0.783	1.00
244_V	247_E	0.782	1.00
26_L	29_G	0.782	1.00
308_T	516_A	0.781	1.00
352_L	470_M	0.781	1.00
240_L	553_I	0.780	1.00
336_I	413_A	0.780	1.00
176_A	280_S	0.779	1.00
114_A	119_I	0.777	1.00
541_Y	544_A	0.777	1.00
316_T	320_R	0.776	1.00
465_R	469_H	0.775	1.00
108_D	112_A	0.774	1.00
424_T	427_Q	0.773	1.00
486_I	555_G	0.771	1.00
304_E	498_A	0.770	1.00
466_T	470_M	0.770	1.00
184_V	192_V	0.769	1.00
343_D	347_Y	0.769	1.00
429_A	516_A	0.768	1.00
122_D	126_A	0.768	1.00
411_E	414_T	0.768	1.00
481_G	515_T	0.767	1.00
230_H	449_V	0.766	1.00
44_W	48_I	0.765	1.00
333_P	340_E	0.765	1.00
192_V	232_L	0.765	1.00
110_W	116_A	0.763	1.00
493_I	547_A	0.759	1.00
462_S	465_R	0.756	1.00
110_W	117_L	0.753	1.00
202_G	206_E	0.753	1.00
261_S	531_V	0.751	1.00
196_F	199_W	0.750	1.00
193_E	197_D	0.748	1.00
31_I	38_L	0.746	1.00
272_V	426_L	0.746	1.00
145_P	149_D	0.745	1.00
109_R	113_L	0.743	1.00
323_V	370_A	0.743	1.00
70_S	228_A	0.742	1.00
128_I	131_N	0.739	1.00
425_P	514_Y	0.739	1.00
237_D	240_L	0.739	1.00
269_T	444_L	0.737	1.00
119_I	124_L	0.734	1.00
371_M	375_A	0.730	1.00
26_L	30_C	0.728	1.00
309_V	421_L	0.728	1.00
430_R	433_A	0.726	1.00
138_Y	141_R	0.726	1.00
263_V	298_T	0.726	1.00
175_T	245_Y	0.725	1.00
91_I	193_E	0.722	1.00
205_G	226_S	0.721	1.00
94_D	176_A	0.719	1.00
269_T	441_Y	0.719	1.00
491_I	550_F	0.718	1.00
553_I	557_V	0.716	1.00
99_H	102_G	0.715	1.00
347_Y	354_G	0.714	1.00
426_L	443_P	0.714	1.00
318_L	467_V	0.714	1.00
442_R	452_P	0.713	1.00
334_Y	365_S	0.713	1.00
474_V	480_G	0.712	1.00
343_D	362_V	0.711	1.00
330_N	366_K	0.710	1.00
58_D	61_S	0.707	1.00
364_V	367_L	0.705	1.00
345_A	360_S	0.704	1.00
467_V	470_M	0.702	1.00
203_Q	224_T	0.700	1.00
366_K	369_L	0.700	1.00
322_V	327_S	0.699	1.00
306_G	498_A	0.697	1.00
472_E	475_A	0.695	1.00
109_R	112_A	0.694	1.00
183_N	190_E	0.694	1.00
239_R	243_L	0.694	1.00
303_F	512_I	0.694	1.00
433_A	441_Y	0.690	1.00
312_M	385_L	0.689	1.00
295_R	300_T	0.689	1.00
353_T	357_Q	0.687	1.00
313_V	368_A	0.687	1.00
42_V	45_L	0.687	1.00
79_G	447_T	0.687	1.00
515_T	550_F	0.684	1.00
34_A	38_L	0.684	1.00
140_A	149_D	0.684	1.00
350_L	355_V	0.683	1.00
357_Q	474_V	0.683	1.00
242_A	245_Y	0.683	1.00
95_P	114_A	0.683	1.00
309_V	313_V	0.681	1.00
316_T	371_M	0.680	1.00
76_D	79_G	0.679	1.00
422_M	425_P	0.678	1.00
356_L	364_V	0.675	1.00
513_A	545_V	0.675	1.00
196_F	446_I	0.675	1.00
38_L	41_R	0.673	1.00
74_I	82_L	0.671	1.00
314_V	356_L	0.671	1.00
491_I	515_T	0.671	1.00
30_C	34_A	0.671	1.00
195_S	199_W	0.670	1.00
432_Y	527_A	0.669	1.00
147_M	177_H	0.669	1.00
322_V	375_A	0.668	1.00
199_W	449_V	0.668	1.00
304_E	512_I	0.667	1.00
305_P	428_L	0.667	1.00
265_V	272_V	0.665	1.00
554_M	557_V	0.664	1.00
77_R	447_T	0.661	1.00
383_F	434_T	0.660	1.00
101_A	209_V	0.659	1.00
107_G	111_K	0.659	1.00
341_I	365_S	0.657	1.00
302_V	427_Q	0.657	1.00
164_E	167_R	0.657	1.00
326_N	353_T	0.655	1.00
208_I	222_S	0.655	1.00
72_G	232_L	0.654	1.00
341_I	417_F	0.652	1.00
110_W	125_S	0.652	1.00
98_V	101_A	0.652	1.00
247_E	553_I	0.651	1.00
513_A	543_G	0.651	1.00
164_E	168_Y	0.650	1.00
518_V	527_A	0.650	1.00
318_L	352_L	0.650	1.00
530_V	546_S	0.649	1.00
131_N	136_F	0.649	1.00
240_L	243_L	0.649	1.00
42_V	46_Q	0.648	1.00
468_V	472_E	0.647	1.00
314_V	470_M	0.647	1.00
430_R	441_Y	0.646	1.00
371_M	376_L	0.646	1.00
372_P	412_R	0.643	1.00
552_A	556_G	0.642	1.00
29_G	33_L	0.639	1.00
419_Y	422_M	0.639	1.00
299_I	426_L	0.638	1.00
489_Y	563_I	0.638	1.00
519_A	526_F	0.638	1.00
303_F	533_N	0.638	1.00
430_R	434_T	0.637	1.00
93_A	193_E	0.637	1.00
28_C	31_I	0.637	1.00
179_I	192_V	0.636	1.00
364_V	416_S	0.634	1.00
322_V	371_M	0.633	1.00
146_D	150_Y	0.632	1.00
322_V	367_L	0.631	1.00
545_V	548_P	0.630	1.00
272_V	275_M	0.630	1.00
314_V	467_V	0.630	1.00
377_V	415_F	0.630	1.00
383_F	431_V	0.628	1.00
132_P	136_F	0.627	1.00
519_A	524_P	0.626	1.00
526_F	554_M	0.625	1.00
239_R	556_G	0.623	1.00
78_S	239_R	0.623	1.00
305_P	309_V	0.623	1.00
489_Y	558_L	0.622	1.00
325_E	353_T	0.622	1.00
341_I	414_T	0.622	1.00
434_T	458_V	0.622	1.00
512_I	533_N	0.619	1.00
93_A	204_P	0.617	1.00
440_I	443_P	0.617	1.00
227_Q	230_H	0.617	1.00
82_L	238_E	0.616	1.00
244_V	260_G	0.616	1.00
207_R	212_D	0.615	1.00
265_V	426_L	0.614	1.00
373_S	412_R	0.614	1.00
426_L	430_R	0.612	1.00
362_V	365_S	0.611	1.00
102_G	179_I	0.609	0.99
175_T	179_I	0.607	0.99
487_K	551_G	0.606	0.99
265_V	529_V	0.605	0.99
106_V	110_W	0.604	0.99
489_Y	562_N	0.603	0.99
429_A	433_A	0.602	0.99
471_M	518_V	0.602	0.99
28_C	32_L	0.602	0.99
460_P	464_V	0.600	0.99
459_F	463_I	0.600	0.99
236_I	445_S	0.599	0.99
40_G	43_A	0.599	0.99
381_S	386_G	0.599	0.99
149_D	153_K	0.599	0.99
104_I	114_A	0.598	0.99
411_E	420_G	0.598	0.99
110_W	121_L	0.596	0.99
268_N	438_Y	0.594	0.99
331_T	348_S	0.591	0.99
224_T	228_A	0.590	0.99
206_E	224_T	0.590	0.99
124_L	145_P	0.587	0.99
291_K	294_M	0.587	0.99
320_R	323_V	0.586	0.99
322_V	325_E	0.586	0.99
112_A	122_D	0.584	0.99
308_T	514_Y	0.583	0.99
64_V	206_E	0.581	0.99
314_V	367_L	0.580	0.99
415_F	421_L	0.580	0.99
293_A	297_R	0.580	0.99
311_P	467_V	0.579	0.99
307_S	310_K	0.579	0.99
309_V	312_M	0.578	0.99
440_I	458_V	0.577	0.99
90_A	138_Y	0.577	0.99
357_Q	470_M	0.577	0.99
250_N	254_F	0.576	0.99
542_G	546_S	0.576	0.99
251_A	548_P	0.575	0.99
558_L	563_I	0.575	0.99
54_V	58_D	0.574	0.99
148_A	152_K	0.574	0.99
44_W	47_V	0.573	0.99
373_S	415_F	0.572	0.99
542_G	548_P	0.572	0.99
259_S	533_N	0.571	0.99
532_I	545_V	0.571	0.99
190_E	281_Y	0.570	0.99
267_V	524_P	0.570	0.99
114_A	121_L	0.570	0.99
442_R	455_G	0.570	0.99
127_R	131_N	0.570	0.99
105_S	216_R	0.567	0.99
214_Y	217_V	0.567	0.99
483_K	544_A	0.566	0.99
368_A	415_F	0.565	0.99
111_K	114_A	0.565	0.99
339_H	365_S	0.563	0.99
35_L	39_L	0.563	0.99
327_S	363_G	0.562	0.99
331_T	350_L	0.562	0.99
436_G	468_V	0.560	0.99
78_S	238_E	0.560	0.99
380_Y	385_L	0.560	0.99
417_F	499_K	0.559	0.99
474_V	479_G	0.559	0.99
108_D	220_D	0.558	0.99
483_K	548_P	0.558	0.99
31_I	35_L	0.558	0.99
202_G	205_G	0.557	0.99
270_G	441_Y	0.557	0.99
428_L	432_Y	0.557	0.99
23_R	27_L	0.557	0.99
197_D	203_Q	0.557	0.99
513_A	532_I	0.555	0.99
45_L	48_I	0.553	0.99
264_L	267_V	0.552	0.99
365_S	369_L	0.551	0.99
442_R	454_P	0.551	0.99
103_G	106_V	0.550	0.99
237_D	273_L	0.549	0.99
389_T	427_Q	0.548	0.99
91_I	159_I	0.547	0.99
61_S	210_R	0.547	0.99
305_P	419_Y	0.547	0.99
183_N	187_Q	0.546	0.99
483_K	547_A	0.546	0.99
519_A	525_R	0.546	0.99
277_N	298_T	0.546	0.99
318_L	323_V	0.546	0.99
86_V	168_Y	0.546	0.99
305_P	420_G	0.545	0.99
98_V	103_G	0.545	0.99
241_Q	245_Y	0.543	0.99
377_V	411_E	0.543	0.99
189_I	194_K	0.543	0.99
72_G	229_A	0.543	0.99
130_A	137_I	0.542	0.99
542_G	545_V	0.541	0.99
261_S	277_N	0.541	0.99
339_H	414_T	0.541	0.99
94_D	135_R	0.538	0.99
132_P	135_R	0.538	0.99
142_Q	166_R	0.537	0.99
336_I	369_L	0.536	0.99
107_G	125_S	0.534	0.99
109_R	117_L	0.534	0.99
265_V	441_Y	0.534	0.99
72_G	75_T	0.533	0.99
134_G	137_I	0.533	0.99
41_R	46_Q	0.533	0.99
232_L	446_I	0.533	0.99
207_R	220_D	0.531	0.99
515_T	547_A	0.530	0.99
143_V	182_T	0.530	0.99
109_R	156_L	0.529	0.99
126_A	130_A	0.528	0.99
316_T	376_L	0.528	0.99
441_Y	454_P	0.527	0.99
258_E	536_Q	0.526	0.99
374_S	411_E	0.526	0.99
209_V	217_V	0.526	0.99
368_A	413_A	0.525	0.98
113_L	116_A	0.524	0.98
444_L	447_T	0.523	0.98
53_L	56_E	0.523	0.98
474_V	515_T	0.522	0.98
205_G	229_A	0.521	0.98
419_Y	498_A	0.521	0.98
329_L	367_L	0.521	0.98
476_L	490_R	0.521	0.98
493_I	517_G	0.519	0.98
92_W	176_A	0.519	0.98
122_D	125_S	0.519	0.98
30_C	37_F	0.518	0.98
57_G	60_R	0.518	0.98
489_Y	555_G	0.517	0.98
192_V	215_G	0.517	0.98
475_A	484_A	0.516	0.98
224_T	227_Q	0.515	0.98
474_V	493_I	0.515	0.98
91_I	151_I	0.514	0.98
232_L	449_V	0.513	0.98
484_A	551_G	0.513	0.98
25_A	32_L	0.513	0.98
252_V	257_A	0.511	0.98
476_L	482_V	0.511	0.98
428_L	431_V	0.511	0.98
434_T	459_F	0.510	0.98
561_M	564_E	0.510	0.98
193_E	205_G	0.508	0.98
458_V	464_V	0.508	0.98
173_E	280_S	0.508	0.98
93_A	159_I	0.508	0.98
156_L	159_I	0.507	0.98
41_R	47_V	0.507	0.98
90_A	162_R	0.507	0.98
263_V	527_A	0.507	0.98
364_V	470_M	0.506	0.98
518_V	554_M	0.505	0.98
39_L	46_Q	0.505	0.98
382_R	458_V	0.505	0.98
441_Y	452_P	0.504	0.98
63_R	211_K	0.504	0.98
49_S	53_L	0.501	0.98
103_G	175_T	0.501	0.98
261_S	297_R	0.501	0.98
24_F	27_L	0.500	0.98
329_L	355_V	0.500	0.98

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3equA	1	0.7296	100	0.202	Contact Map
4ovdA	2	0.6922	100	0.214	Contact Map
4ye5A	1	0.8639	100	0.222	Contact Map
4bjpA	2	0.6956	100	0.224	Contact Map
3ue3A	1	0.7296	100	0.235	Contact Map
3pbtA	1	0.8435	100	0.238	Contact Map
2wadA	1	0.8112	100	0.242	Contact Map
1qmeA	1	0.7075	100	0.274	Contact Map
3vskA	2	0.8452	100	0.278	Contact Map
1vqqA	1	0.9167	100	0.297	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0154 seconds.