YEHU - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YEHU - Sensor histidine kinase YehU

UniProt:	P0AD14	Sequences: MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12007
Length:	561 (542)
Sequences:	593 (434)
Seq/√Len:	18.6

ECOLI - YEHU

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
505_E	550_R	5.580	1.00
159_L	165_Y	4.327	1.00
529_L	539_I	4.105	1.00
266_H	305_C	4.002	1.00
267_H	299_C	3.824	1.00
266_H	299_C	3.793	1.00
252_D	255_K	3.762	1.00
267_H	305_C	3.748	1.00
526_D	538_G	3.632	1.00
51_S	91_V	3.505	1.00
526_D	539_I	3.438	1.00
151_E	154_Q	3.286	1.00
299_C	305_C	3.278	1.00
51_S	54_C	3.222	0.99
105_M	171_L	3.083	0.99
488_R	507_N	2.905	0.99
265_D	305_C	2.843	0.99
106_T	110_C	2.805	0.98
495_R	557_W	2.728	0.98
72_R	99_R	2.725	0.98
155_M	179_M	2.687	0.98
539_I	553_L	2.596	0.97
388_L	521_G	2.551	0.97
165_Y	169_V	2.512	0.97
449_Q	488_R	2.498	0.97
109_S	161_I	2.472	0.96
154_Q	171_L	2.455	0.96
278_T	327_K	2.410	0.96
529_L	533_F	2.370	0.95
155_M	172_V	2.355	0.95
305_C	314_P	2.344	0.95
87_V	202_E	2.306	0.95
117_E	154_Q	2.284	0.94
79_G	87_V	2.249	0.94
97_L	101_S	2.233	0.94
72_R	151_E	2.226	0.94
432_H	468_L	2.226	0.94
324_G	329_Y	2.225	0.94
224_R	356_L	2.212	0.93
218_S	241_Q	2.175	0.93
54_C	95_G	2.142	0.92
490_A	505_E	2.137	0.92
499_H	554_R	2.132	0.92
100_Y	348_A	2.126	0.92
506_D	509_G	2.124	0.92
453_A	492_S	2.087	0.91
451_N	490_A	2.071	0.91
70_N	179_M	2.066	0.91
451_N	488_R	2.065	0.91
398_D	401_Q	2.062	0.91
508_A	548_Y	2.058	0.90
542_A	550_R	2.032	0.90
312_V	315_L	2.010	0.89
316_R	322_V	2.009	0.89
423_F	533_F	1.981	0.89
453_A	490_A	1.978	0.89
470_P	525_V	1.977	0.89
265_D	299_C	1.974	0.88
544_E	547_S	1.955	0.88
396_R	403_S	1.948	0.88
324_G	327_K	1.922	0.87
59_W	350_L	1.919	0.87
309_S	314_P	1.910	0.87
311_L	314_P	1.887	0.86
537_Y	553_L	1.860	0.85
158_I	168_A	1.825	0.84
99_R	151_E	1.823	0.84
526_D	530_R	1.823	0.84
92_G	96_G	1.818	0.84
88_G	118_G	1.818	0.84
154_Q	158_I	1.797	0.83
51_S	551_I	1.775	0.82
106_T	468_L	1.768	0.82
448_L	525_V	1.748	0.81
343_L	416_N	1.745	0.81
51_S	94_T	1.745	0.81
64_I	413_F	1.744	0.81
266_H	307_L	1.735	0.81
21_A	193_I	1.733	0.81
22_W	31_I	1.722	0.80
480_T	521_G	1.718	0.80
524_L	548_Y	1.708	0.80
307_L	310_T	1.697	0.79
305_C	310_T	1.691	0.79
45_L	489_V	1.690	0.79
155_M	158_I	1.687	0.79
110_C	114_T	1.685	0.79
480_T	486_T	1.680	0.79
22_W	192_R	1.678	0.79
450_V	491_I	1.675	0.78
110_C	117_E	1.673	0.78
159_L	172_V	1.672	0.78
259_F	267_H	1.665	0.78
98_H	110_C	1.655	0.78
263_G	266_H	1.630	0.76
97_L	446_S	1.626	0.76
508_A	524_L	1.623	0.76
470_P	479_G	1.617	0.76
131_R	498_Q	1.609	0.76
176_A	180_M	1.608	0.75
48_I	450_V	1.595	0.75
113_S	154_Q	1.588	0.75
30_F	53_F	1.587	0.74
281_A	288_V	1.586	0.74
275_S	297_Y	1.583	0.74
453_A	494_R	1.579	0.74
359_Q	450_V	1.575	0.74
493_A	500_L	1.575	0.74
509_G	548_Y	1.568	0.74
99_R	110_C	1.564	0.73
113_S	179_M	1.552	0.73
448_L	479_G	1.546	0.72
509_G	512_Q	1.543	0.72
463_L	532_R	1.520	0.71
125_H	433_V	1.510	0.71
391_I	405_L	1.505	0.70
423_F	532_R	1.487	0.69
155_M	440_E	1.485	0.69
306_K	309_S	1.462	0.68
33_L	177_A	1.453	0.68
22_W	466_F	1.450	0.67
347_I	351_L	1.444	0.67
61_G	68_I	1.440	0.67
237_Q	241_Q	1.438	0.67
52_I	115_I	1.433	0.67
36_V	410_S	1.431	0.66
348_A	363_Q	1.425	0.66
455_P	494_R	1.419	0.66
267_H	275_S	1.415	0.65
363_Q	531_E	1.414	0.65
305_C	315_L	1.403	0.65
236_A	328_L	1.393	0.64
526_D	553_L	1.392	0.64
105_M	164_P	1.387	0.64
28_P	177_A	1.387	0.64
388_L	448_L	1.375	0.63
413_F	447_R	1.369	0.63
235_V	338_S	1.369	0.63
179_M	440_E	1.369	0.63
110_C	164_P	1.366	0.63
105_M	150_A	1.363	0.63
15_C	372_I	1.356	0.62
110_C	179_M	1.354	0.62
387_A	440_E	1.351	0.62
388_L	406_V	1.348	0.62
57_G	392_K	1.345	0.61
299_C	307_L	1.343	0.61
73_A	196_D	1.339	0.61
72_R	114_T	1.333	0.61
275_S	327_K	1.332	0.61
158_I	194_L	1.331	0.61
310_T	314_P	1.330	0.61
59_W	110_C	1.329	0.60
541_V	551_I	1.329	0.60
411_T	435_A	1.325	0.60
248_V	395_I	1.323	0.60
76_A	95_G	1.313	0.60
76_A	108_L	1.311	0.59
197_K	200_M	1.308	0.59
453_A	489_V	1.306	0.59
176_A	538_G	1.300	0.59
455_P	500_L	1.299	0.59
52_I	456_Q	1.296	0.58
48_I	55_I	1.293	0.58
392_K	407_Q	1.290	0.58
240_Y	260_T	1.289	0.58
309_S	315_L	1.287	0.58
405_L	442_A	1.287	0.58
109_S	157_I	1.284	0.58
217_A	224_R	1.277	0.57
54_C	91_V	1.273	0.57
44_F	89_G	1.273	0.57
109_S	399_S	1.270	0.57
247_A	263_G	1.269	0.57
181_V	468_L	1.268	0.57
227_F	357_A	1.260	0.56
96_G	250_I	1.255	0.56
259_F	305_C	1.252	0.56
360_Y	428_D	1.248	0.56
348_A	365_A	1.243	0.55
171_L	190_F	1.240	0.55
480_T	487_G	1.235	0.55
70_N	151_E	1.234	0.55
59_W	98_H	1.233	0.55
151_E	179_M	1.232	0.55
60_F	71_T	1.226	0.54
54_C	76_A	1.225	0.54
184_T	188_A	1.225	0.54
15_C	51_S	1.221	0.54
521_G	525_V	1.220	0.54
259_F	266_H	1.219	0.54
67_S	106_T	1.219	0.54
169_V	173_S	1.218	0.54
143_A	159_L	1.218	0.54
492_S	505_E	1.214	0.53
486_T	555_L	1.213	0.53
158_I	179_M	1.212	0.53
373_K	377_A	1.210	0.53
194_L	441_K	1.200	0.53
275_S	278_T	1.186	0.52
525_V	538_G	1.183	0.52
236_A	379_V	1.181	0.51
232_S	313_I	1.180	0.51
227_F	355_I	1.178	0.51
439_I	476_I	1.175	0.51
237_Q	320_Q	1.170	0.51
72_R	110_C	1.160	0.50
399_S	476_I	1.149	0.49
67_S	144_G	1.139	0.49
209_S	466_F	1.134	0.48
277_Y	290_A	1.130	0.48
119_L	454_I	1.130	0.48
520_L	524_L	1.126	0.48
79_G	246_G	1.126	0.48
455_P	498_Q	1.121	0.48
387_A	412_F	1.120	0.48
498_Q	546_D	1.113	0.47
81_L	246_G	1.112	0.47
154_Q	162_A	1.109	0.47
251_T	327_K	1.109	0.47
169_V	446_S	1.108	0.47
472_V	491_I	1.105	0.47
216_A	350_L	1.101	0.46
94_T	222_I	1.100	0.46
314_P	327_K	1.097	0.46
247_A	267_H	1.097	0.46
157_I	168_A	1.096	0.46
104_G	261_G	1.094	0.46
186_G	390_T	1.094	0.46
434_N	452_I	1.092	0.46
401_Q	404_Q	1.089	0.46
117_E	151_E	1.076	0.45
267_H	307_L	1.075	0.45
112_I	161_I	1.071	0.45
110_C	215_V	1.071	0.45
116_V	157_I	1.065	0.44
388_L	479_G	1.065	0.44
455_P	495_R	1.062	0.44
496_E	501_M	1.058	0.44
169_V	497_G	1.056	0.44
413_F	440_E	1.054	0.43
303_P	314_P	1.053	0.43
21_A	190_F	1.052	0.43
153_V	202_E	1.048	0.43
114_T	117_E	1.047	0.43
223_L	235_V	1.042	0.43
263_G	272_P	1.042	0.43
67_S	105_M	1.039	0.43
110_C	158_I	1.032	0.42
479_G	521_G	1.031	0.42
496_E	513_P	1.030	0.42
263_G	267_H	1.030	0.42
427_A	460_Q	1.029	0.42
237_Q	476_I	1.020	0.41
377_A	519_G	1.018	0.41
497_G	516_N	1.011	0.41
265_D	307_L	1.004	0.40
114_T	179_M	0.999	0.40
117_E	171_L	0.996	0.40
45_L	48_I	0.994	0.40
228_N	231_N	0.991	0.40
324_G	352_S	0.991	0.40
387_A	390_T	0.991	0.40
177_A	230_V	0.989	0.40
107_A	111_M	0.986	0.39
263_G	305_C	0.982	0.39
330_E	335_L	0.980	0.39
324_G	346_G	0.980	0.39
77_V	412_F	0.980	0.39
59_W	75_G	0.978	0.39
67_S	467_T	0.973	0.39
350_L	354_Q	0.973	0.39
152_M	180_M	0.972	0.39
266_H	275_S	0.972	0.39
172_V	179_M	0.972	0.39
67_S	164_P	0.969	0.38
317_G	359_Q	0.967	0.38
379_V	466_F	0.965	0.38
259_F	263_G	0.963	0.38
247_A	299_C	0.961	0.38
57_G	182_T	0.959	0.38
510_L	549_T	0.958	0.38
262_I	306_K	0.952	0.37
147_T	472_V	0.949	0.37
322_V	471_I	0.948	0.37
110_C	151_E	0.945	0.37
155_M	175_I	0.945	0.37
216_A	416_N	0.944	0.37
151_E	175_I	0.943	0.37
247_A	261_G	0.940	0.37
256_L	273_I	0.940	0.37
530_R	538_G	0.936	0.36
355_I	360_Y	0.934	0.36
476_I	533_F	0.932	0.36
156_L	180_M	0.932	0.36
476_I	489_V	0.930	0.36
67_S	75_G	0.929	0.36
124_V	153_V	0.925	0.36
233_M	237_Q	0.924	0.36
507_N	519_G	0.921	0.36
167_D	170_R	0.921	0.36
419_R	466_F	0.918	0.35
123_L	127_I	0.917	0.35
193_I	231_N	0.916	0.35
261_G	267_H	0.915	0.35
22_W	523_N	0.913	0.35
103_G	183_N	0.912	0.35
70_N	99_R	0.911	0.35
188_A	291_D	0.911	0.35
58_T	479_G	0.904	0.35
277_Y	551_I	0.903	0.35
83_G	366_M	0.903	0.35
16_V	75_G	0.901	0.34
336_F	441_K	0.898	0.34
336_F	413_F	0.896	0.34
97_L	108_L	0.893	0.34
400_E	442_A	0.893	0.34
395_I	406_V	0.892	0.34
450_V	463_L	0.892	0.34
83_G	190_F	0.891	0.34
120_L	230_V	0.891	0.34
347_I	352_S	0.889	0.34
79_G	458_L	0.888	0.34
251_T	315_L	0.886	0.34
236_A	367_L	0.886	0.34
172_V	216_A	0.886	0.34
87_V	220_E	0.885	0.34
489_V	541_V	0.885	0.34
157_I	413_F	0.885	0.34
124_V	516_N	0.883	0.33
259_F	297_Y	0.883	0.33
272_P	455_P	0.883	0.33
65_D	68_I	0.883	0.33
171_L	175_I	0.881	0.33
52_I	498_Q	0.877	0.33
47_Y	91_V	0.876	0.33
7_V	26_K	0.872	0.33
70_N	440_E	0.871	0.33
41_P	64_I	0.871	0.33
387_A	405_L	0.871	0.33
223_L	426_L	0.867	0.33
320_Q	425_T	0.863	0.32
56_M	529_L	0.863	0.32
461_Q	497_G	0.861	0.32
105_M	162_A	0.860	0.32
143_A	407_Q	0.859	0.32
236_A	452_I	0.858	0.32
314_P	324_G	0.857	0.32
341_R	345_E	0.856	0.32
460_Q	491_I	0.856	0.32
501_M	554_R	0.856	0.32
455_P	459_S	0.856	0.32
75_G	79_G	0.856	0.32
285_G	327_K	0.853	0.32
13_Q	53_F	0.852	0.32
180_M	480_T	0.851	0.32
121_G	127_I	0.851	0.32
25_S	74_I	0.850	0.32
401_Q	438_Q	0.850	0.32
73_A	154_Q	0.848	0.31
495_R	555_L	0.846	0.31
461_Q	500_L	0.846	0.31
124_V	146_V	0.845	0.31
33_L	358_G	0.845	0.31
320_Q	462_Q	0.844	0.31
413_F	417_L	0.843	0.31
74_I	153_V	0.843	0.31
53_F	433_V	0.841	0.31
18_L	55_I	0.840	0.31
58_T	125_H	0.839	0.31
112_I	426_L	0.838	0.31
17_F	156_L	0.838	0.31
498_Q	552_T	0.838	0.31
475_A	538_G	0.837	0.31
410_S	471_I	0.837	0.31
230_V	453_A	0.837	0.31
364_K	439_I	0.836	0.31
181_V	391_I	0.836	0.31
16_V	157_I	0.836	0.31
100_Y	108_L	0.833	0.31
150_A	437_L	0.833	0.31
179_M	389_N	0.833	0.31
468_L	551_I	0.832	0.31
448_L	521_G	0.831	0.31
70_N	110_C	0.830	0.31
15_C	18_L	0.828	0.30
162_A	167_D	0.825	0.30
209_S	458_L	0.822	0.30
441_K	541_V	0.814	0.30
246_G	374_L	0.813	0.30
249_A	263_G	0.813	0.30
416_N	432_H	0.812	0.30
222_I	281_A	0.812	0.30
29_L	52_I	0.809	0.29
286_E	460_Q	0.809	0.29
26_K	200_M	0.806	0.29
77_V	479_G	0.805	0.29
109_S	168_A	0.804	0.29
15_C	22_W	0.803	0.29
67_S	111_M	0.800	0.29
51_S	90_L	0.796	0.29
185_V	540_S	0.796	0.29
361_E	416_N	0.796	0.29
252_D	311_L	0.795	0.29
262_I	331_A	0.795	0.29
150_A	171_L	0.794	0.29
151_E	180_M	0.793	0.29
479_G	525_V	0.793	0.29
48_I	97_L	0.787	0.28
479_G	520_L	0.784	0.28
442_A	489_V	0.784	0.28
153_V	185_V	0.784	0.28
57_G	479_G	0.782	0.28
259_F	299_C	0.781	0.28
372_I	521_G	0.781	0.28
259_F	310_T	0.780	0.28
144_G	188_A	0.779	0.28
436_Y	489_V	0.777	0.28
9_L	438_Q	0.776	0.28
23_L	460_Q	0.775	0.28
54_C	111_M	0.774	0.28
543_C	549_T	0.773	0.28
451_N	505_E	0.772	0.28
270_G	282_I	0.772	0.28
326_I	353_A	0.771	0.27
106_T	179_M	0.771	0.27
10_L	86_V	0.770	0.27
21_A	24_M	0.765	0.27
19_V	79_G	0.765	0.27
467_T	472_V	0.763	0.27
387_A	489_V	0.763	0.27
57_G	75_G	0.763	0.27
430_I	455_P	0.763	0.27
378_Q	435_A	0.762	0.27
438_Q	441_K	0.761	0.27
433_V	502_L	0.761	0.27
177_A	498_Q	0.761	0.27
15_C	465_A	0.759	0.27
78_M	412_F	0.759	0.27
488_R	540_S	0.758	0.27
68_I	98_H	0.758	0.27
39_R	241_Q	0.756	0.27
492_S	540_S	0.756	0.27
104_G	175_I	0.755	0.27
232_S	345_E	0.755	0.27
105_M	168_A	0.754	0.27
229_E	401_Q	0.754	0.27
271_K	276_T	0.754	0.27
526_D	532_R	0.754	0.27
496_E	555_L	0.754	0.27
250_I	493_A	0.752	0.27
6_L	203_K	0.752	0.27
48_I	496_E	0.751	0.26
445_Q	521_G	0.750	0.26
526_D	529_L	0.748	0.26
25_S	197_K	0.748	0.26
379_V	387_A	0.748	0.26
103_G	111_M	0.746	0.26
237_Q	501_M	0.743	0.26
86_V	185_V	0.740	0.26
249_A	261_G	0.739	0.26
168_A	171_L	0.738	0.26
48_I	323_M	0.738	0.26
390_T	440_E	0.738	0.26
328_L	455_P	0.738	0.26
47_Y	94_T	0.737	0.26
113_S	194_L	0.736	0.26
8_L	12_Q	0.735	0.26
44_F	555_L	0.731	0.26
154_Q	190_F	0.730	0.25
172_V	417_L	0.730	0.25
410_S	466_F	0.729	0.25
293_N	555_L	0.726	0.25
282_I	359_Q	0.725	0.25
154_Q	157_I	0.725	0.25
153_V	434_N	0.725	0.25
106_T	164_P	0.725	0.25
258_A	311_L	0.725	0.25
50_F	524_L	0.725	0.25
247_A	266_H	0.724	0.25
259_F	347_I	0.723	0.25
145_A	458_L	0.723	0.25
105_M	154_Q	0.722	0.25
112_I	463_L	0.722	0.25
535_D	540_S	0.721	0.25
80_G	84_G	0.720	0.25
247_A	305_C	0.719	0.25
392_K	413_F	0.717	0.25
47_Y	51_S	0.717	0.25
395_I	462_Q	0.712	0.25
546_D	552_T	0.712	0.25
530_R	533_F	0.712	0.25
275_S	299_C	0.711	0.25
426_L	549_T	0.708	0.24
75_G	114_T	0.708	0.24
212_A	448_L	0.707	0.24
209_S	520_L	0.707	0.24
209_S	439_I	0.707	0.24
251_T	314_P	0.706	0.24
307_L	366_M	0.706	0.24
266_H	314_P	0.706	0.24
398_D	519_G	0.704	0.24
18_L	387_A	0.702	0.24
27_T	30_F	0.701	0.24
236_A	531_E	0.701	0.24
391_I	524_L	0.701	0.24
148_F	264_D	0.700	0.24
71_T	154_Q	0.700	0.24
529_L	555_L	0.699	0.24
185_V	504_I	0.698	0.24
155_M	171_L	0.696	0.24
23_L	276_T	0.696	0.24
15_C	368_T	0.696	0.24
48_I	320_Q	0.695	0.24
35_Q	447_R	0.694	0.24
266_H	306_K	0.693	0.24
143_A	191_M	0.693	0.24
52_I	116_V	0.692	0.24
68_I	158_I	0.692	0.24
19_V	412_F	0.690	0.24
266_H	315_L	0.690	0.24
7_V	100_Y	0.689	0.24
58_T	388_L	0.689	0.24
247_A	251_T	0.688	0.24
22_W	281_A	0.686	0.23
114_T	424_V	0.685	0.23
329_Y	346_G	0.684	0.23
265_D	314_P	0.684	0.23
405_L	475_A	0.682	0.23
22_W	95_G	0.682	0.23
379_V	524_L	0.680	0.23
45_L	364_K	0.679	0.23
493_A	553_L	0.676	0.23
150_A	468_L	0.676	0.23
261_G	266_H	0.676	0.23
401_Q	555_L	0.676	0.23
44_F	536_D	0.676	0.23
115_I	166_E	0.675	0.23
31_I	424_V	0.669	0.23
154_Q	193_I	0.667	0.23
67_S	99_R	0.667	0.23
215_V	441_K	0.667	0.23
364_K	418_K	0.666	0.23
164_P	168_A	0.666	0.23
244_D	359_Q	0.666	0.23
367_L	442_A	0.666	0.23
182_T	256_L	0.665	0.23
509_G	524_L	0.665	0.23
154_Q	186_G	0.662	0.22
286_E	316_R	0.661	0.22
48_I	181_V	0.661	0.22
130_R	379_V	0.660	0.22
206_S	541_V	0.660	0.22
186_G	378_Q	0.659	0.22
402_A	533_F	0.659	0.22
120_L	494_R	0.657	0.22
48_I	489_V	0.656	0.22
95_G	98_H	0.656	0.22
149_V	535_D	0.656	0.22
292_G	344_G	0.656	0.22
365_A	387_A	0.655	0.22
394_V	465_A	0.655	0.22
41_P	116_V	0.655	0.22
543_C	547_S	0.655	0.22
110_C	155_M	0.654	0.22
249_A	361_E	0.649	0.22
85_P	380_N	0.649	0.22
162_A	322_V	0.649	0.22
162_A	168_A	0.648	0.22
113_S	466_F	0.647	0.22
259_F	275_S	0.646	0.22
375_L	524_L	0.646	0.22
16_V	25_S	0.645	0.22
434_N	512_Q	0.645	0.22
378_Q	429_E	0.644	0.22
212_A	487_G	0.644	0.22
177_A	454_I	0.643	0.22
162_A	175_I	0.643	0.22
309_S	489_V	0.642	0.22
120_L	529_L	0.641	0.21
131_R	169_V	0.639	0.21
320_Q	450_V	0.638	0.21
148_F	246_G	0.637	0.21
59_W	155_M	0.636	0.21
68_I	144_G	0.636	0.21
106_T	117_E	0.636	0.21
10_L	57_G	0.634	0.21
62_L	78_M	0.634	0.21
322_V	327_K	0.633	0.21
121_G	476_I	0.631	0.21
167_D	320_Q	0.631	0.21
69_A	154_Q	0.630	0.21
16_V	62_L	0.629	0.21
81_L	143_A	0.628	0.21
286_E	542_A	0.626	0.21
62_L	254_E	0.622	0.21
294_E	447_R	0.622	0.21
59_W	179_M	0.622	0.21
415_K	479_G	0.622	0.21
441_K	476_I	0.621	0.21
10_L	424_V	0.621	0.21
19_V	71_T	0.621	0.21
483_L	488_R	0.620	0.21
117_E	157_I	0.619	0.21
309_S	380_N	0.619	0.21
243_L	408_Y	0.617	0.20
70_N	390_T	0.616	0.20
379_V	481_S	0.616	0.20
384_L	468_L	0.615	0.20
98_H	172_V	0.615	0.20
401_Q	453_A	0.615	0.20
228_N	387_A	0.615	0.20
322_V	424_V	0.615	0.20
480_T	507_N	0.612	0.20
235_V	447_R	0.609	0.20
266_H	310_T	0.608	0.20
401_Q	424_V	0.608	0.20
322_V	538_G	0.606	0.20
149_V	497_G	0.604	0.20
159_L	164_P	0.604	0.20
237_Q	283_E	0.604	0.20
161_I	365_A	0.604	0.20
22_W	26_K	0.604	0.20
7_V	551_I	0.603	0.20
35_Q	540_S	0.603	0.20
225_Q	230_V	0.601	0.20
228_N	257_L	0.600	0.20
105_M	117_E	0.600	0.20
44_F	148_F	0.599	0.20
407_Q	413_F	0.599	0.20
267_H	297_Y	0.599	0.20
186_G	437_L	0.598	0.20
412_F	468_L	0.598	0.20
434_N	476_I	0.597	0.20
150_A	154_Q	0.597	0.20
74_I	182_T	0.597	0.20
98_H	106_T	0.597	0.20
427_A	471_I	0.596	0.20
268_L	447_R	0.595	0.20
101_S	166_E	0.594	0.20
359_Q	362_R	0.593	0.20
465_A	471_I	0.593	0.20
72_R	179_M	0.593	0.20
367_L	416_N	0.592	0.19
470_P	487_G	0.592	0.19
69_A	435_A	0.591	0.19
501_M	552_T	0.591	0.19
115_I	160_A	0.590	0.19
57_G	415_K	0.589	0.19
463_L	522_M	0.589	0.19
48_I	530_R	0.589	0.19
58_T	466_F	0.588	0.19
375_L	508_A	0.587	0.19
110_C	278_T	0.587	0.19
312_V	327_K	0.587	0.19
280_K	504_I	0.585	0.19
87_V	375_L	0.584	0.19
517_A	521_G	0.583	0.19
89_G	476_I	0.582	0.19
171_L	226_G	0.581	0.19
284_T	294_E	0.580	0.19
54_C	220_E	0.580	0.19
147_T	172_V	0.580	0.19
166_E	505_E	0.579	0.19
510_L	548_Y	0.579	0.19
110_C	374_L	0.578	0.19
202_E	365_A	0.578	0.19
348_A	504_I	0.577	0.19
215_V	356_L	0.577	0.19
326_I	329_Y	0.576	0.19
460_Q	536_D	0.576	0.19
76_A	114_T	0.575	0.19
395_I	399_S	0.574	0.19
472_V	504_I	0.574	0.19
181_V	463_L	0.574	0.19
22_W	91_V	0.574	0.19
307_L	314_P	0.573	0.19
399_S	403_S	0.573	0.19
534_G	538_G	0.571	0.19
227_F	231_N	0.569	0.19
261_G	305_C	0.568	0.19
217_A	432_H	0.568	0.19
276_T	279_L	0.567	0.19
31_I	376_H	0.566	0.18
93_L	311_L	0.566	0.18
254_E	497_G	0.565	0.18
511_Y	535_D	0.564	0.18
14_M	249_A	0.563	0.18
48_I	286_E	0.562	0.18
33_L	424_V	0.561	0.18
218_S	242_E	0.560	0.18
129_I	148_F	0.560	0.18
452_I	498_Q	0.560	0.18
217_A	353_A	0.560	0.18
40_L	302_H	0.560	0.18
392_K	406_V	0.559	0.18
400_E	497_G	0.559	0.18
345_E	466_F	0.559	0.18
510_L	514_V	0.558	0.18
29_L	79_G	0.558	0.18
232_S	502_L	0.557	0.18
12_Q	197_K	0.556	0.18
492_S	503_E	0.555	0.18
474_N	528_R	0.555	0.18
267_H	314_P	0.554	0.18
112_I	505_E	0.553	0.18
17_F	24_M	0.553	0.18
161_I	260_T	0.552	0.18
10_L	359_Q	0.552	0.18
529_L	553_L	0.551	0.18
466_F	549_T	0.551	0.18
11_L	289_Y	0.551	0.18
473_E	528_R	0.551	0.18
305_C	309_S	0.551	0.18
375_L	424_V	0.550	0.18
371_E	440_E	0.550	0.18
239_L	351_L	0.550	0.18
493_A	501_M	0.549	0.18
533_F	553_L	0.549	0.18
122_G	373_K	0.549	0.18
450_V	495_R	0.548	0.18
230_V	505_E	0.547	0.18
76_A	113_S	0.547	0.18
211_T	244_D	0.547	0.18
491_I	496_E	0.545	0.18
93_L	348_A	0.544	0.18
169_V	260_T	0.544	0.18
108_L	514_V	0.543	0.18
6_L	435_A	0.543	0.18
99_R	440_E	0.542	0.18
43_K	157_I	0.542	0.18
116_V	348_A	0.542	0.18
462_Q	550_R	0.540	0.18
145_A	165_Y	0.540	0.18
83_G	183_N	0.539	0.17
425_T	428_D	0.538	0.17
337_S	380_N	0.538	0.17
161_I	202_E	0.537	0.17
475_A	522_M	0.537	0.17
16_V	60_F	0.537	0.17
496_E	554_R	0.536	0.17
495_R	498_Q	0.536	0.17
155_M	159_L	0.536	0.17
340_N	344_G	0.535	0.17
151_E	155_M	0.534	0.17
110_C	168_A	0.534	0.17
110_C	470_P	0.534	0.17
283_E	498_Q	0.533	0.17
120_L	499_H	0.533	0.17
75_G	168_A	0.532	0.17
8_L	149_V	0.531	0.17
158_I	395_I	0.531	0.17
107_A	164_P	0.530	0.17
212_A	216_A	0.530	0.17
322_V	447_R	0.530	0.17
337_S	372_I	0.529	0.17
99_R	114_T	0.529	0.17
239_L	347_I	0.529	0.17
25_S	242_E	0.528	0.17
34_M	192_R	0.527	0.17
269_P	272_P	0.527	0.17
106_T	114_T	0.527	0.17
348_A	531_E	0.527	0.17
23_L	270_G	0.526	0.17
145_A	513_P	0.524	0.17
275_S	310_T	0.523	0.17
251_T	324_G	0.523	0.17
54_C	75_G	0.523	0.17
248_V	398_D	0.522	0.17
109_S	243_L	0.522	0.17
124_V	184_T	0.521	0.17
67_S	72_R	0.520	0.17
293_N	449_Q	0.519	0.17
370_S	391_I	0.519	0.17
322_V	439_I	0.519	0.17
98_H	105_M	0.518	0.17
109_S	349_Q	0.518	0.17
219_T	343_L	0.517	0.17
264_D	507_N	0.515	0.17
177_A	532_R	0.514	0.17
8_L	52_I	0.514	0.17
6_L	10_L	0.513	0.17
62_L	249_A	0.512	0.17
181_V	255_K	0.512	0.17
446_S	499_H	0.512	0.17
26_K	384_L	0.511	0.16
24_M	452_I	0.509	0.16
45_L	400_E	0.509	0.16
120_L	502_L	0.509	0.16
210_A	231_N	0.508	0.16
179_M	226_G	0.508	0.16
337_S	350_L	0.508	0.16
25_S	487_G	0.508	0.16
28_P	102_M	0.507	0.16
248_V	355_I	0.507	0.16
378_Q	507_N	0.506	0.16
185_V	238_V	0.506	0.16
145_A	491_I	0.505	0.16
370_S	403_S	0.505	0.16
22_W	98_H	0.503	0.16
24_M	27_T	0.503	0.16
146_V	154_Q	0.502	0.16
93_L	472_V	0.502	0.16
109_S	215_V	0.502	0.16
156_L	547_S	0.502	0.16
527_K	550_R	0.502	0.16
398_D	444_F	0.501	0.16
13_Q	16_V	0.501	0.16
237_Q	512_Q	0.501	0.16
10_L	481_S	0.501	0.16
102_M	249_A	0.501	0.16
96_G	476_I	0.501	0.16
306_K	310_T	0.500	0.16

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4bixA	2	0.3494	99.9	0.875	Contact Map
2w1rA	2	0.2068	99.9	0.877	Contact Map
4i5sA	2	0.6061	99.9	0.88	Contact Map
2w1tA	2	0.3084	99.9	0.888	Contact Map
1i58A	2	0.2424	99.9	0.897	Contact Map
4ctiA	2	0.3797	99.8	0.897	Contact Map
3ehhA	2	0.3102	99.8	0.898	Contact Map
1b3qA	2	0.3512	99.8	0.9	Contact Map
4r39A	1	0.3316	99.8	0.904	Contact Map
2c2aA	2	0.3476	99.8	0.906	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0148 seconds.