GREMLIN Database
SDHA - Succinate dehydrogenase flavoprotein subunit
UniProt: P0AC41 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10931
Length: 588 (516)
Sequences: 5506 (2760)
Seq/√Len: 121.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
549_D552_N4.5971.00
11_V180_C3.9171.00
363_K367_Q3.8001.00
166_A225_M3.4131.00
8_F34_A3.3211.00
86_E90_K3.3111.00
270_E275_R3.1821.00
80_G85_I3.1491.00
266_N270_E3.0231.00
471_F527_A3.0011.00
477_G534_T2.9531.00
88_M394_V2.9351.00
22_A199_V2.8501.00
491_R524_Y2.8281.00
470_N482_K2.8151.00
266_N296_E2.8091.00
274_E281_K2.6571.00
253_V257_C2.6011.00
384_F418_H2.5401.00
477_G481_A2.5321.00
161_F193_F2.4921.00
271_R282_D2.4641.00
152_Q155_K2.4411.00
484_L527_A2.4311.00
476_E543_F2.3901.00
13_I180_C2.3901.00
184_C187_T2.3831.00
227_I525_A2.3641.00
32_T159_T2.3621.00
91_T414_A2.3581.00
462_A486_Q2.3351.00
534_T545_F2.3281.00
34_A161_F2.2621.00
488_K524_Y2.2491.00
17_G408_L2.2491.00
481_A531_N2.2421.00
360_I389_I2.2311.00
67_W131_A2.1811.00
7_E194_K2.1751.00
22_A386_V2.1701.00
26_I419_L2.1151.00
471_F483_G2.1091.00
367_Q418_H2.1081.00
87_Y414_A2.1021.00
36_L182_A2.0701.00
223_V233_V2.0631.00
168_D228_R2.0441.00
385_A389_I2.0351.00
476_E479_A2.0211.00
17_G46_T2.0201.00
232_P379_V2.0191.00
9_D196_R2.0031.00
200_L360_I1.9921.00
88_M411_F1.9621.00
144_A147_H1.9611.00
265_L316_D1.9121.00
265_L346_P1.9071.00
320_K324_E1.8941.00
26_I416_G1.8931.00
293_I311_A1.8901.00
245_G352_T1.8751.00
182_A193_F1.8671.00
487_L527_A1.8531.00
466_C483_G1.8421.00
471_F480_M1.8371.00
109_L113_R1.8351.00
200_L389_I1.8211.00
316_D346_P1.8191.00
263_Y271_R1.8081.00
34_A193_F1.7941.00
199_V419_L1.7881.00
331_L335_R1.7711.00
226_A360_I1.7601.00
368_A385_A1.7401.00
46_T146_L1.7391.00
77_D548_R1.7311.00
82_Q86_E1.7181.00
27_S156_N1.7181.00
462_A493_R1.7181.00
202_T222_G1.7021.00
95_A98_E1.7011.00
467_M471_F1.7011.00
484_L524_Y1.6991.00
205_A356_M1.6841.00
257_C262_G1.6761.00
175_G381_P1.6701.00
233_V236_M1.6691.00
365_T418_H1.6621.00
184_C191_V1.6621.00
295_I299_E1.6581.00
232_P361_P1.6571.00
208_I526_T1.6541.00
324_E331_L1.6531.00
69_M86_E1.6521.00
76_S80_G1.6411.00
176_A382_G1.6361.00
58_G62_E1.6341.00
463_L487_L1.6311.00
484_L528_V1.6291.00
466_C486_Q1.6251.00
84_A364_V1.6251.00
477_G542_R1.6211.00
228_R518_N1.6201.00
10_A26_I1.5811.00
177_V198_T1.5701.00
320_K343_V1.5341.00
362_T390_A1.5301.00
226_A231_V1.5281.00
153_N160_I1.5221.00
315_L318_L1.5191.00
415_A419_L1.5121.00
491_R521_E1.5101.00
366_G415_A1.5061.00
324_E343_V1.4991.00
56_A65_W1.4981.00
483_G527_A1.4921.00
97_L101_H1.4801.00
53_I145_L1.4801.00
170_V192_Y1.4761.00
65_W90_K1.4701.00
38_K515_E1.4601.00
486_Q489_V1.4591.00
43_R48_S1.4551.00
484_L531_N1.4531.00
84_A88_M1.4521.00
470_N483_G1.4481.00
254_T257_C1.4441.00
8_F11_V1.4401.00
25_Q417_L1.4401.00
470_N479_A1.4391.00
69_M73_V1.4381.00
38_K221_D1.4301.00
65_W69_M1.4241.00
416_G420_Q1.4241.00
195_A198_T1.4211.00
91_T94_E1.4101.00
454_E493_R1.4091.00
213_T245_G1.3961.00
418_H422_S1.3871.00
197_A422_S1.3841.00
28_Q156_N1.3841.00
176_A381_P1.3771.00
54_T402_G1.3771.00
357_M539_A1.3731.00
8_F159_T1.3731.00
205_A239_W1.3711.00
200_L383_L1.3671.00
234_Q361_P1.3671.00
46_T408_L1.3591.00
109_L112_G1.3571.00
38_K219_T1.3541.00
169_L177_V1.3461.00
209_Y471_F1.3451.00
296_E301_R1.3441.00
95_A413_R1.3391.00
477_G531_N1.3381.00
465_E469_H1.3331.00
524_Y528_V1.3321.00
8_F32_T1.3311.00
271_R274_E1.3301.00
254_T330_I1.3281.00
331_L343_V1.3221.00
20_M153_N1.3191.00
221_D518_N1.3151.00
471_F526_T1.3141.00
199_V386_V1.3131.00
210_Q465_E1.3131.00
418_H421_E1.3131.00
161_F164_W1.3081.00
104_L145_L1.3061.00
18_A386_V1.3021.00
294_M298_R1.2911.00
200_L226_A1.2891.00
234_Q391_C1.2751.00
8_F161_F1.2731.00
263_Y282_D1.2731.00
10_A199_V1.2691.00
206_G353_C1.2621.00
164_W182_A1.2560.99
84_A394_V1.2460.99
416_G419_L1.2440.99
481_A485_E1.2440.99
170_V181_T1.2410.99
291_R541_S1.2280.99
13_I200_L1.2260.99
164_W184_C1.2260.99
35_L160_I1.2190.99
91_T95_A1.2070.99
470_N486_Q1.2070.99
92_G406_L1.2060.99
36_L180_C1.2020.99
24_L153_N1.2000.99
65_W89_C1.1960.99
384_F422_S1.1940.99
21_R25_Q1.1930.99
11_V36_L1.1930.99
530_A540_H1.1920.99
264_L349_V1.1910.99
166_A180_C1.1870.99
66_E86_E1.1830.99
66_E70_Y1.1790.99
272_F293_I1.1690.99
15_A37_S1.1640.99
70_Y74_K1.1630.99
166_A182_A1.1610.99
68_H403_N1.1560.99
260_E326_R1.1480.99
205_A526_T1.1470.99
164_W191_V1.1470.99
228_R521_E1.1460.99
134_T402_G1.1460.99
223_V522_T1.1340.99
154_L162_S1.1260.99
168_D225_M1.1220.99
69_M89_C1.1210.99
323_L331_L1.1200.99
360_I385_A1.1170.99
237_E533_R1.1140.99
25_Q413_R1.1070.99
318_L322_V1.1070.99
9_D32_T1.1060.99
481_A484_L1.1040.99
413_R417_L1.1030.99
461_K465_E1.0990.99
10_A419_L1.0920.99
551_E554_L1.0880.99
477_G545_F1.0820.98
362_T385_A1.0810.98
419_L423_I1.0780.98
87_Y91_T1.0770.98
87_Y411_F1.0720.98
79_I537_R1.0660.98
22_A419_L1.0640.98
143_H147_H1.0620.98
20_M35_L1.0610.98
35_L153_N1.0610.98
68_H72_T1.0580.98
460_R464_Q1.0580.98
87_Y364_V1.0560.98
22_A415_A1.0520.98
67_W130_Q1.0510.98
104_L148_T1.0510.98
231_V383_L1.0490.98
25_Q416_G1.0470.98
153_N158_T1.0470.98
276_Y296_E1.0450.98
57_L135_A1.0440.98
341_D344_K1.0420.98
466_C470_N1.0410.98
104_L144_A1.0380.98
197_A384_F1.0350.98
223_V356_M1.0330.98
460_R519_L1.0310.98
98_E413_R1.0310.98
332_E336_T1.0270.98
85_I89_C1.0270.98
412_G416_G1.0210.98
333_L336_T1.0180.98
340_V345_E1.0170.98
276_Y292_S1.0150.98
152_Q156_N1.0140.98
13_I166_A1.0130.98
181_T190_V1.0090.98
482_K486_Q1.0060.98
466_C490_I1.0060.98
69_M82_Q1.0060.98
534_T553_W1.0040.98
41_P150_Y0.9970.97
165_Y514_L0.9940.97
150_Y160_I0.9930.97
320_K344_K0.9920.97
394_V411_F0.9920.97
102_M152_Q0.9890.97
274_E282_D0.9870.97
171_K177_V0.9870.97
463_L516_L0.9850.97
181_T192_Y0.9830.97
494_L520_M0.9790.97
25_Q28_Q0.9750.97
27_S157_H0.9680.97
93_P97_L0.9650.97
367_Q422_S0.9630.97
334_S342_P0.9620.97
107_S136_A0.9620.97
340_V347_I0.9600.97
362_T392_V0.9600.97
140_R329_G0.9580.97
486_Q490_I0.9580.97
488_K528_V0.9540.97
475_R530_A0.9530.97
24_L156_N0.9520.97
169_L198_T0.9490.97
386_V415_A0.9470.96
231_V379_V0.9460.96
197_A423_I0.9450.96
11_V195_A0.9430.96
319_G322_V0.9390.96
47_V143_H0.9390.96
443_R517_D0.9370.96
24_L102_M0.9370.96
72_T403_N0.9340.96
105_P144_A0.9300.96
298_R469_H0.9290.96
529_S557_S0.9280.96
23_A158_T0.9240.96
165_Y515_E0.9190.96
169_L180_C0.9180.96
53_I96_I0.9180.96
323_L343_V0.9170.96
125_N132_A0.9130.96
463_L490_I0.9110.96
132_A260_E0.9100.96
231_V380_V0.9100.96
362_T411_F0.9080.96
324_E335_R0.9080.96
151_Q155_K0.9060.95
210_Q468_Q0.8970.95
21_R95_A0.8960.95
55_V96_I0.8960.95
284_A289_V0.8930.95
296_E299_E0.8920.95
273_M281_K0.8900.95
537_R546_P0.8890.95
321_E325_S0.8870.95
265_L314_K0.8850.95
420_Q423_I0.8830.95
262_G315_L0.8740.95
25_Q98_E0.8730.94
312_K346_P0.8710.94
236_M526_T0.8690.94
88_M406_L0.8690.94
275_R299_E0.8680.94
219_T515_E0.8670.94
474_F543_F0.8670.94
224_G228_R0.8650.94
315_L323_L0.8650.94
11_V198_T0.8630.94
263_Y317_H0.8620.94
108_R114_I0.8600.94
224_G522_T0.8590.94
98_E102_M0.8580.94
491_R520_M0.8580.94
83_D364_V0.8540.94
94_E97_L0.8520.94
201_A386_V0.8510.94
84_A87_Y0.8500.94
537_R545_F0.8480.94
460_R516_L0.8480.94
284_A288_V0.8440.93
271_R281_K0.8440.93
171_K175_G0.8420.93
73_V85_I0.8420.93
236_M529_S0.8410.93
10_A31_Q0.8390.93
73_V80_G0.8380.93
232_P558_L0.8380.93
39_V43_R0.8370.93
11_V34_A0.8360.93
196_R423_I0.8350.93
484_L488_K0.8330.93
53_I409_V0.8290.93
69_M85_I0.8280.93
10_A30_G0.8220.93
463_L520_M0.8180.92
236_M522_T0.8180.92
99_L145_L0.8180.92
220_G522_T0.8180.92
528_V532_F0.8160.92
26_I31_Q0.8150.92
276_Y295_I0.8130.92
175_G380_V0.8110.92
272_F282_D0.8110.92
232_P560_L0.8110.92
467_M523_A0.8110.92
39_V217_I0.8090.92
275_R296_E0.8080.92
334_S340_V0.8060.92
81_D391_C0.8050.92
255_E258_R0.8040.92
91_T413_R0.8030.92
26_I30_G0.8000.91
32_T157_H0.7990.91
225_M228_R0.7990.91
341_D345_E0.7990.91
196_R427_G0.7980.91
137_A144_A0.7970.91
435_S438_E0.7950.91
70_Y82_Q0.7950.91
239_W526_T0.7950.91
12_V33_C0.7930.91
331_L342_P0.7930.91
89_C92_G0.7900.91
480_M527_A0.7890.91
65_W93_P0.7890.91
100_E114_I0.7880.91
535_E546_P0.7870.91
265_L312_K0.7840.91
417_L421_E0.7830.91
459_I516_L0.7830.91
487_L524_Y0.7820.91
126_F134_T0.7800.90
98_E101_H0.7780.90
207_R464_Q0.7780.90
416_G423_I0.7780.90
126_F402_G0.7760.90
422_S426_Q0.7710.90
128_G357_M0.7680.90
277_A285_G0.7680.90
298_R543_F0.7640.89
56_A89_C0.7620.89
365_T414_A0.7600.89
458_A462_A0.7590.89
29_S421_E0.7590.89
197_A419_L0.7580.89
7_E32_T0.7580.89
45_H218_N0.7580.89
235_D556_H0.7540.89
478_D482_K0.7520.89
54_T129_E0.7510.89
27_S158_T0.7470.88
41_P160_I0.7460.88
22_A26_I0.7440.88
126_F129_E0.7440.88
73_V82_Q0.7420.88
105_P108_R0.7420.88
257_C315_L0.7400.88
41_P162_S0.7380.88
213_T352_T0.7380.88
205_A223_V0.7370.88
108_R112_G0.7360.88
475_R540_H0.7360.88
199_V415_A0.7350.88
21_R98_E0.7340.88
209_Y526_T0.7330.87
266_N271_R0.7330.87
233_V525_A0.7320.87
105_P148_T0.7310.87
30_G33_C0.7300.87
207_R519_L0.7260.87
29_S420_Q0.7250.87
11_V193_F0.7240.87
454_E458_A0.7240.87
54_T134_T0.7230.87
27_S33_C0.7210.87
529_S559_Y0.7200.87
294_M474_F0.7190.86
94_E413_R0.7190.86
182_A191_V0.7170.86
462_A465_E0.7170.86
297_I310_H0.7150.86
295_I474_F0.7150.86
470_N527_A0.7140.86
146_L150_Y0.7140.86
333_L337_F0.7120.86
171_K174_D0.7120.86
222_G389_I0.7110.86
258_R261_G0.7100.86
117_R260_E0.7100.86
173_Q178_V0.7090.86
525_A559_Y0.7080.86
272_F276_Y0.7060.85
164_W193_F0.7060.85
456_P513_C0.7040.85
322_V325_S0.7030.85
100_E108_R0.7030.85
421_E425_E0.7020.85
35_L41_P0.7020.85
171_K178_V0.7020.85
147_H151_Q0.7010.85
481_A528_V0.7000.85
238_M533_R0.6990.85
150_Y154_L0.6960.85
206_G212_T0.6960.85
272_F275_R0.6950.85
242_H255_E0.6910.84
211_S468_Q0.6900.84
335_R343_V0.6900.84
334_S347_I0.6900.84
367_Q384_F0.6900.84
196_R429_L0.6880.84
489_V492_E0.6880.84
253_V347_I0.6850.84
199_V423_I0.6850.84
267_K300_G0.6830.84
490_I520_M0.6830.84
270_E296_E0.6820.83
277_A284_A0.6820.83
386_V412_G0.6810.83
53_I406_L0.6810.83
125_N128_G0.6810.83
105_P147_H0.6810.83
315_L319_G0.6810.83
208_I522_T0.6800.83
180_C195_A0.6800.83
272_F296_E0.6790.83
323_L342_P0.6790.83
197_A382_G0.6790.83
297_I300_G0.6790.83
202_T389_I0.6780.83
252_L255_E0.6770.83
17_G149_L0.6770.83
44_S146_L0.6730.83
482_K485_E0.6720.83
224_G518_N0.6720.83
55_V135_A0.6720.83
244_T258_R0.6710.82
388_E399_R0.6690.82
45_H215_A0.6690.82
49_A52_G0.6680.82
368_A380_V0.6670.82
184_C189_E0.6670.82
492_E495_K0.6660.82
196_R428_A0.6660.82
64_N67_W0.6650.82
100_E135_A0.6650.82
239_W356_M0.6650.82
27_S420_Q0.6640.82
9_D31_Q0.6640.82
8_F193_F0.6620.82
488_K492_E0.6610.82
285_G288_V0.6600.81
459_I462_A0.6590.81
178_V194_K0.6590.81
24_L152_Q0.6580.81
367_Q381_P0.6580.81
134_T401_G0.6570.81
65_W86_E0.6570.81
450_N453_G0.6540.81
15_A35_L0.6540.81
294_M297_I0.6540.81
257_C323_L0.6520.81
231_V368_A0.6500.80
362_T366_G0.6500.80
536_S541_S0.6470.80
474_F541_S0.6470.80
267_K301_R0.6450.80
536_S546_P0.6450.80
31_Q420_Q0.6440.80
553_W556_H0.6440.80
34_A159_T0.6440.80
293_I349_V0.6430.80
242_H258_R0.6430.80
48_S215_A0.6420.80
67_W70_Y0.6420.80
56_A68_H0.6410.80
469_H479_A0.6400.79
12_V199_V0.6400.79
36_L193_F0.6390.79
292_S295_I0.6370.79
384_F419_L0.6360.79
479_A483_G0.6360.79
485_E488_K0.6360.79
79_I238_M0.6350.79
478_D481_A0.6350.79
253_V330_I0.6350.79
163_E186_E0.6340.79
461_K464_Q0.6340.79
227_I521_E0.6340.79
272_F292_S0.6330.79
206_G239_W0.6330.79
95_A409_V0.6320.79
192_Y437_V0.6320.79
167_L190_V0.6320.79
521_E524_Y0.6320.79
36_L161_F0.6310.78
54_T89_C0.6290.78
79_I237_E0.6260.78
17_G409_V0.6260.78
177_V380_V0.6260.78
206_G214_N0.6250.78
466_C487_L0.6250.78
176_A422_S0.6240.78
129_E402_G0.6240.78
352_T355_Y0.6210.77
47_V147_H0.6210.77
167_L183_L0.6210.77
12_V419_L0.6200.77
264_L273_M0.6200.77
62_E131_A0.6200.77
168_D229_A0.6190.77
445_N449_N0.6190.77
31_Q423_I0.6190.77
364_V411_F0.6190.77
419_L422_S0.6180.77
487_L520_M0.6160.77
469_H482_K0.6150.77
45_H48_S0.6140.77
127_G279_N0.6130.76
297_I302_G0.6130.76
354_H357_M0.6120.76
224_G521_E0.6120.76
319_G343_V0.6110.76
294_M473_V0.6110.76
104_L409_V0.6110.76
126_F401_G0.6110.76
318_L323_L0.6110.76
457_V512_E0.6080.76
84_A392_V0.6080.76
292_S296_E0.6070.76
297_I350_I0.6070.76
139_D258_R0.6070.76
267_K302_G0.6060.76
206_G356_M0.6060.76
12_V22_A0.6050.76
321_E324_E0.6050.76
73_V78_Y0.6050.76
255_E259_G0.6030.75
382_G422_S0.6030.75
9_D34_A0.6000.75
489_V493_R0.6000.75
251_V333_L0.5990.75
180_C198_T0.5980.75
234_Q392_V0.5980.75
169_L200_L0.5970.75
219_T518_N0.5960.74
275_R282_D0.5930.74
268_H301_R0.5920.74
114_I117_R0.5910.74
205_A208_I0.5890.74
480_M530_A0.5890.74
354_H400_L0.5880.73
115_Y136_A0.5870.73
467_M470_N0.5850.73
424_A434_E0.5840.73
227_I233_V0.5840.73
25_Q412_G0.5830.73
21_R102_M0.5820.73
170_V194_K0.5820.73
412_G419_L0.5810.73
140_R144_A0.5800.72
411_F414_A0.5800.72
287_D291_R0.5790.72
459_I497_A0.5780.72
553_W557_S0.5780.72
22_A412_G0.5770.72
293_I297_I0.5740.72
40_F162_S0.5740.72
351_P354_H0.5730.72
251_V330_I0.5720.71
206_G209_Y0.5720.71
29_S417_L0.5720.71
208_I523_A0.5720.71
52_G242_H0.5720.71
454_E462_A0.5710.71
386_V408_L0.5710.71
488_K491_R0.5710.71
253_V333_L0.5710.71
97_L100_E0.5710.71
266_N275_R0.5700.71
483_G486_Q0.5700.71
497_A513_C0.5690.71
492_E496_N0.5670.71
244_T255_E0.5670.71
272_F355_Y0.5670.71
273_M277_A0.5670.71
178_V198_T0.5660.71
402_G407_D0.5640.70
144_A148_T0.5630.70
171_K381_P0.5630.70
72_T85_I0.5620.70
323_L327_L0.5610.70
25_Q29_S0.5610.70
177_V382_G0.5610.70
222_G229_A0.5600.70
56_A69_M0.5600.70
428_A431_D0.5590.70
28_Q98_E0.5590.70
266_N282_D0.5590.70
421_E426_Q0.5580.70
167_L181_T0.5560.69
459_I520_M0.5560.69
221_D515_E0.5550.69
453_G498_R0.5550.69
211_S350_I0.5540.69
276_Y300_G0.5540.69
286_R290_A0.5540.69
459_I493_R0.5530.69
460_R515_E0.5510.69
27_S30_G0.5500.68
288_V291_R0.5500.68
279_N282_D0.5500.68
252_L258_R0.5490.68
28_Q152_Q0.5490.68
515_E519_L0.5490.68
355_Y358_G0.5490.68
316_D319_G0.5490.68
21_R412_G0.5470.68
12_V30_G0.5470.68
86_E89_C0.5460.68
246_I368_A0.5460.68
279_N288_V0.5440.68
89_C411_F0.5440.68
241_F472_S0.5440.68
12_V23_A0.5430.67
511_V515_E0.5420.67
53_I106_F0.5420.67
365_T417_L0.5420.67
273_M284_A0.5410.67
52_G244_T0.5390.67
410_V414_A0.5390.67
170_V178_V0.5380.67
528_V531_N0.5370.67
469_H486_Q0.5360.66
145_L409_V0.5360.66
267_K310_H0.5360.66
26_I420_Q0.5350.66
532_F557_S0.5340.66
549_D553_W0.5330.66
424_A428_A0.5330.66
148_T152_Q0.5320.66
129_E134_T0.5320.66
177_V383_L0.5310.66
422_S425_E0.5310.66
455_D458_A0.5310.66
446_R450_N0.5310.66
430_R481_A0.5310.66
534_T542_R0.5300.66
183_L188_G0.5300.66
462_A489_V0.5300.66
257_C330_I0.5290.65
287_D290_A0.5290.65
460_R512_E0.5280.65
169_L236_M0.5280.65
548_R554_L0.5270.65
107_S214_N0.5270.65
263_Y281_K0.5270.65
432_A435_S0.5270.65
156_N380_V0.5260.65
323_L346_P0.5260.65
24_L158_T0.5250.65
185_I511_V0.5250.65
165_Y518_N0.5240.65
310_H348_P0.5230.65
535_E545_F0.5220.64
22_A33_C0.5210.64
81_D556_H0.5200.64
266_N272_F0.5190.64
171_K380_V0.5180.64
350_I468_Q0.5170.64
256_G259_G0.5170.64
109_L115_Y0.5170.64
178_V381_P0.5170.64
70_Y73_V0.5160.64
91_T410_V0.5160.64
545_F549_D0.5160.64
139_D259_G0.5150.63
246_I251_V0.5150.63
344_K430_R0.5150.63
194_K429_L0.5140.63
351_P355_Y0.5130.63
58_G61_H0.5130.63
277_A288_V0.5130.63
69_M90_K0.5120.63
243_P287_D0.5120.63
150_Y153_N0.5120.63
479_A482_K0.5110.63
534_T552_N0.5110.63
50_Q327_L0.5100.63
425_E428_A0.5100.63
117_R136_A0.5100.63
220_G224_G0.5090.63
524_Y527_A0.5090.63
75_G401_G0.5070.62
427_G431_D0.5060.62
165_Y511_V0.5060.62
390_A411_F0.5050.62
240_Q399_R0.5050.62
107_S138_A0.5050.62
302_G311_A0.5040.62
494_L497_A0.5030.62
354_H388_E0.5030.62
527_A531_N0.5000.61
37_S160_I0.5000.61
47_V146_L0.5000.61
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2bs2A 2 0.966 100 0.265 Contact Map
2h88A 2 0.9796 100 0.266 Contact Map
1kf6A 1 0.9524 100 0.276 Contact Map
2wdqA 1 0.9796 100 0.281 Contact Map
1chuA 2 0.7908 100 0.38 Contact Map
3gyxA 2 0.9235 100 0.381 Contact Map
1jnrA 2 0.9048 100 0.408 Contact Map
2e5vA 1 0.7993 100 0.41 Contact Map
4c3xA 4 0.6599 100 0.617 Contact Map
4at0A 2 0.6616 100 0.665 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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