GREMLIN Database
DNAG - DNA primase
UniProt: P0ABS5 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10239
Length: 581 (553)
Sequences: 3921 (2926)
Seq/√Len: 124.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
66_A76_N5.1121.00
189_V199_R3.4951.00
32_Q37_H3.3891.00
210_D214_R3.3691.00
216_I244_Q3.3121.00
166_D170_K3.1711.00
344_E348_T3.0681.00
219_G267_Y3.0421.00
137_T141_Q3.0181.00
120_M238_I2.9041.00
25_A92_M2.8751.00
37_H51_T2.8531.00
126_F167_N2.8511.00
344_E352_K2.8071.00
112_Q184_D2.8011.00
45_E63_G2.7691.00
40_C64_C2.7641.00
59_Y76_N2.7071.00
40_C43_H2.6721.00
12_D16_R2.6141.00
43_H64_C2.5851.00
366_M374_N2.4931.00
17_T93_H2.4731.00
144_E150_H2.4441.00
124_N157_A2.4171.00
60_H65_G2.4031.00
115_T181_S2.3971.00
20_V36_F2.3781.00
123_L187_M2.3551.00
116_L238_I2.3491.00
303_N334_Q2.3431.00
143_L204_V2.3431.00
160_F202_E2.3241.00
184_D237_D2.3221.00
152_V275_Q2.3201.00
29_L52_V2.3051.00
164_G167_N2.2751.00
209_R249_Y2.2741.00
260_R280_Y2.2691.00
87_E99_F2.2601.00
17_T22_L2.2521.00
155_R279_N2.2231.00
80_L88_E2.2191.00
124_N215_V2.1981.00
384_T387_G2.1501.00
312_R316_D2.1421.00
141_Q145_K2.1381.00
261_L297_L2.1371.00
284_S308_Y2.1211.00
254_D279_N2.1051.00
34_K55_E2.0711.00
123_L168_V2.0571.00
45_E50_F2.0561.00
243_R292_D2.0271.00
40_C63_G1.9971.00
169_L188_L1.9931.00
128_Q157_A1.9591.00
370_A414_E1.9581.00
255_N261_L1.9541.00
27_V38_A1.9361.00
43_H63_G1.9121.00
206_F246_Y1.9051.00
360_A364_Q1.9031.00
139_A204_V1.8901.00
219_G285_L1.8741.00
81_E84_E1.8691.00
222_V226_D1.8641.00
209_R250_E1.8501.00
180_Q184_D1.8391.00
228_P231_L1.8311.00
53_N56_K1.8121.00
355_K359_E1.8111.00
359_E363_E1.8111.00
349_L353_E1.8091.00
22_L70_A1.8061.00
150_H154_A1.8051.00
148_L268_M1.7931.00
18_D54_G1.7871.00
122_G177_E1.7861.00
183_I190_T1.7841.00
163_P202_E1.7771.00
122_G175_N1.7731.00
173_G179_R1.7701.00
305_I338_M1.7631.00
260_R303_N1.7621.00
303_N336_R1.7591.00
217_G233_S1.7441.00
150_H153_I1.7411.00
9_F13_L1.7361.00
377_M418_K1.7321.00
316_D320_R1.7191.00
78_D88_E1.7061.00
26_R78_D1.6931.00
72_D76_N1.6891.00
149_S152_V1.6881.00
82_F86_V1.6851.00
178_N181_S1.6851.00
35_N53_N1.6841.00
60_H67_H1.6671.00
124_N128_Q1.6661.00
482_L485_F1.6531.00
138_S202_E1.6421.00
59_Y66_A1.6291.00
222_V227_T1.6161.00
182_L188_L1.6151.00
26_R77_Y1.6011.00
69_N72_D1.5961.00
239_F285_L1.5591.00
153_I158_I1.5481.00
130_S162_P1.5461.00
157_A209_R1.5391.00
9_F98_P1.5341.00
191_N195_R1.5321.00
155_R250_E1.5311.00
14_L69_N1.5291.00
13_L86_V1.5281.00
35_N51_T1.5261.00
284_S293_H1.5241.00
120_M217_G1.5171.00
482_L486_R1.5081.00
38_A52_V1.5021.00
353_E361_R1.5011.00
17_T70_A1.4911.00
128_Q154_A1.4901.00
379_Q394_L1.4881.00
140_R150_H1.4861.00
235_E240_H1.4861.00
117_Y214_R1.4821.00
373_F395_A1.4811.00
185_A188_L1.4651.00
414_E417_N1.4641.00
61_C64_C1.4631.00
47_T63_G1.4631.00
74_L88_E1.4501.00
264_V281_A1.4441.00
197_Y201_R1.4441.00
116_L185_A1.4431.00
380_V394_L1.4411.00
356_E360_A1.4331.00
40_C61_C1.4331.00
131_L143_L1.4311.00
53_N58_F1.4281.00
233_S236_T1.4271.00
310_G344_E1.4261.00
149_S275_Q1.4181.00
340_L361_R1.4171.00
14_L71_I1.4131.00
10_I86_V1.4111.00
336_R365_A1.4021.00
294_I324_T1.3911.00
550_R553_E1.3891.00
47_T50_F1.3881.00
50_F63_G1.3851.00
140_R153_I1.3761.00
396_L430_L1.3711.00
294_I325_A1.3661.00
140_R144_E1.3591.00
121_D157_A1.3591.00
117_Y238_I1.3551.00
165_W201_R1.3541.00
7_R11_N1.3531.00
169_L179_R1.3501.00
11_N15_A1.3491.00
165_W197_Y1.3441.00
136_A140_R1.3421.00
412_R426_Q1.3351.00
120_M185_A1.3291.00
14_L70_A1.3181.00
43_H61_C1.3071.00
18_D21_D1.2991.00
199_R234_P1.2931.00
115_T118_Q1.2811.00
338_M361_R1.2741.00
242_G292_D1.2731.00
264_V273_L1.2711.00
533_Q537_D1.2681.00
505_E508_R1.2621.00
129_Q133_Q1.2581.00
13_L95_L1.2561.00
247_G274_A1.2541.00
151_E154_A1.2531.00
144_E153_I1.2511.00
9_F95_L1.2491.00
307_C358_F1.2471.00
126_F130_S1.2390.99
132_Q150_H1.2370.99
183_I196_S1.2280.99
413_Q423_D1.2250.99
132_Q140_R1.2240.99
126_F162_P1.2210.99
259_N302_N1.2180.99
171_R175_N1.2160.99
360_A363_E1.2110.99
350_V358_F1.2110.99
185_A236_T1.2110.99
354_G357_A1.2090.99
240_H243_R1.2070.99
278_I359_E1.2050.99
169_L173_G1.2050.99
527_D530_I1.1980.99
17_T89_L1.1970.99
188_L196_S1.1870.99
258_P359_E1.1860.99
481_G485_F1.1820.99
344_E353_E1.1760.99
46_K63_G1.1740.99
561_H566_E1.1740.99
165_W195_R1.1730.99
503_L507_Y1.1660.99
551_Q555_I1.1640.99
121_D125_T1.1600.99
161_A205_M1.1590.99
553_E557_R1.1530.99
19_I22_L1.1520.99
35_N58_F1.1510.99
267_Y285_L1.1500.99
170_K174_G1.1480.99
60_H66_A1.1480.99
556_A560_T1.1470.99
83_V87_E1.1470.99
128_Q132_Q1.1400.99
183_I188_L1.1390.99
80_L85_T1.1360.99
9_F97_V1.1360.99
17_T92_M1.1350.99
242_G293_H1.1320.99
158_I271_V1.1310.99
177_E182_L1.1300.99
16_R95_L1.1300.99
134_P137_T1.1290.99
304_V325_A1.1280.99
39_C45_E1.1270.99
191_N197_Y1.1260.99
141_Q144_E1.1260.99
20_V54_G1.1250.99
114_Q118_Q1.1220.99
121_D214_R1.1220.99
390_R394_L1.1180.99
247_G250_E1.1130.99
29_L38_A1.1100.99
307_C340_L1.1020.99
319_W372_L1.1000.99
6_P98_P1.0990.99
87_E91_A1.0960.99
199_R231_L1.0940.99
156_F274_A1.0910.99
481_G484_L1.0900.99
143_L153_I1.0880.99
120_M233_S1.0880.99
563_L566_E1.0860.99
208_I219_G1.0820.99
148_L153_I1.0800.99
143_L158_I1.0790.99
322_L368_L1.0780.99
548_E552_E1.0780.99
222_V228_P1.0770.99
562_G565_N1.0760.99
120_M127_Y1.0650.98
172_F182_L1.0640.98
119_L181_S1.0640.98
298_F333_R1.0630.98
12_D15_A1.0610.98
89_L92_M1.0580.98
302_N333_R1.0560.98
347_D351_R1.0550.98
247_G270_V1.0550.98
60_H63_G1.0510.98
122_G171_R1.0460.98
17_T21_D1.0450.98
190_T196_S1.0450.98
260_R363_E1.0440.98
555_I559_R1.0410.98
46_K50_F1.0410.98
484_L488_L1.0350.98
325_A335_L1.0340.98
552_E555_I1.0310.98
59_Y67_H1.0300.98
18_D57_Q1.0300.98
74_L80_L1.0260.98
23_I27_V1.0260.98
119_L177_E1.0230.98
356_E359_E1.0220.98
414_E418_K1.0210.98
273_L350_V1.0190.98
485_F488_L1.0120.98
26_R73_F1.0100.98
40_C66_A1.0100.98
276_Y355_K1.0080.98
380_V387_G1.0070.98
122_G125_T1.0060.98
541_H544_D1.0030.98
205_M220_G1.0000.98
32_Q51_T0.9990.98
244_Q285_L0.9990.98
57_Q70_A0.9980.98
408_R412_R0.9980.98
278_I350_V0.9970.98
58_F67_H0.9940.98
558_E563_L0.9910.98
189_V197_Y0.9870.97
200_F205_M0.9850.97
552_E556_A0.9830.97
88_E92_M0.9830.97
136_A139_A0.9790.97
222_V225_N0.9790.97
561_H565_N0.9760.97
485_F489_V0.9750.97
486_R490_N0.9700.97
537_D541_H0.9620.97
148_L206_F0.9600.97
273_L358_F0.9590.97
137_T140_R0.9570.97
357_A360_A0.9570.97
209_R215_V0.9570.97
172_F177_E0.9510.97
123_L127_Y0.9490.97
308_Y321_A0.9480.97
24_D28_K0.9470.97
5_I83_V0.9400.97
467_L532_E0.9380.97
179_R196_S0.9350.96
17_T74_L0.9350.96
181_S184_D0.9350.96
71_I86_V0.9300.96
284_S306_C0.9260.96
422_L425_S0.9250.96
254_D258_P0.9230.96
38_A50_F0.9200.96
160_F223_L0.9180.96
36_F54_G0.9180.96
132_Q154_A0.9180.96
39_C47_T0.9160.96
282_V297_L0.9140.96
499_T502_Q0.9130.96
51_T58_F0.9120.96
353_E357_A0.9100.96
270_V281_A0.9100.96
510_T513_A0.9080.96
289_T321_A0.9050.96
482_L488_L0.9030.96
377_M391_L0.9020.96
29_L33_G0.8990.96
288_S320_R0.8990.96
71_I89_L0.8980.96
180_Q183_I0.8970.96
202_E224_G0.8880.95
13_L71_I0.8850.95
35_N56_K0.8850.95
39_C50_F0.8810.95
189_V231_L0.8810.95
289_T294_I0.8810.95
272_A276_Y0.8810.95
5_I9_F0.8810.95
248_L300_A0.8810.95
179_R183_I0.8790.95
44_N63_G0.8780.95
262_L278_I0.8770.95
242_G290_T0.8760.95
262_L273_L0.8730.95
490_N494_S0.8730.95
280_Y359_E0.8670.95
260_R305_I0.8670.95
147_G351_R0.8650.95
472_E476_E0.8650.95
416_G421_I0.8640.95
246_Y267_Y0.8630.94
79_K256_A0.8610.94
231_L239_F0.8570.94
39_C63_G0.8550.94
381_D387_G0.8540.94
179_R190_T0.8470.94
119_L185_A0.8470.94
186_G234_P0.8470.94
349_L358_F0.8470.94
26_R88_E0.8460.94
88_E91_A0.8460.94
412_R430_L0.8450.94
130_S133_Q0.8440.94
138_S141_Q0.8430.94
255_N301_T0.8420.94
39_C46_K0.8420.94
132_Q153_I0.8380.94
12_D95_L0.8370.94
84_E87_E0.8370.94
165_W191_N0.8370.94
11_N14_L0.8360.94
412_R427_L0.8360.94
263_V306_C0.8350.93
482_L489_V0.8340.93
19_I59_Y0.8330.93
297_L333_R0.8330.93
483_G486_R0.8320.93
74_L77_Y0.8320.93
127_Y167_N0.8250.93
289_T306_C0.8240.93
162_P167_N0.8240.93
220_G267_Y0.8210.93
416_G426_Q0.8200.93
153_I204_V0.8180.93
395_A415_L0.8140.93
530_I533_Q0.8140.93
139_A143_L0.8120.93
423_D427_L0.8110.92
514_A518_K0.8110.92
151_E155_R0.8100.92
396_L412_R0.8070.92
224_G228_P0.8070.92
217_G244_Q0.8060.92
239_F293_H0.8060.92
556_A559_R0.8050.92
284_S321_A0.8030.92
127_Y168_V0.8020.92
338_M362_M0.8020.92
485_F492_C0.8020.92
274_A279_N0.8010.92
310_G341_P0.7990.92
374_N418_K0.7980.92
43_H66_A0.7980.92
124_N205_M0.7980.92
119_L123_L0.7970.92
191_N194_G0.7970.92
558_E561_H0.7960.92
13_L17_T0.7940.92
190_T194_G0.7930.92
315_R339_F0.7920.92
306_C325_A0.7910.92
219_G231_L0.7910.92
118_Q122_G0.7890.91
213_G249_Y0.7890.91
550_R554_L0.7890.91
310_G343_G0.7890.91
166_D169_L0.7840.91
240_H292_D0.7820.91
262_L362_M0.7820.91
508_R513_A0.7810.91
126_F171_R0.7780.91
557_R561_H0.7780.91
534_T538_S0.7770.91
155_R274_A0.7760.91
548_E551_Q0.7750.91
479_L486_R0.7740.91
413_Q417_N0.7740.91
319_W375_S0.7730.91
8_V12_D0.7730.91
549_L552_E0.7730.91
381_D384_T0.7710.90
318_A339_F0.7700.90
487_E490_N0.7670.90
260_R301_T0.7670.90
509_G513_A0.7670.90
535_F539_L0.7660.90
562_G566_E0.7650.90
481_G488_L0.7640.90
291_A330_T0.7640.90
386_D390_R0.7640.90
348_T351_R0.7630.90
5_I10_I0.7600.90
375_S378_P0.7600.90
454_L535_F0.7580.90
421_I426_Q0.7580.90
90_A93_H0.7560.90
37_H58_F0.7530.89
28_K39_C0.7530.89
479_L482_L0.7520.89
72_D75_M0.7510.89
366_M370_A0.7510.89
9_F12_D0.7510.89
429_R432_P0.7500.89
206_F268_M0.7490.89
182_L185_A0.7480.89
385_P410_Y0.7440.89
549_L553_E0.7420.89
260_R359_E0.7420.89
259_N303_N0.7400.89
217_G240_H0.7390.89
342_D353_E0.7370.88
289_T308_Y0.7370.88
23_I77_Y0.7370.88
477_N480_P0.7360.88
270_V310_G0.7340.88
298_F302_N0.7340.88
408_R434_A0.7330.88
433_K436_E0.7330.88
340_L344_E0.7310.88
376_L394_L0.7290.88
156_F246_Y0.7290.88
127_Y161_A0.7290.88
133_Q136_A0.7270.88
409_I427_L0.7260.88
208_I244_Q0.7250.88
431_M434_A0.7230.87
560_T563_L0.7220.87
76_N79_K0.7210.87
559_R563_L0.7210.87
168_V172_F0.7200.87
516_L520_S0.7190.87
262_L307_C0.7190.87
23_I52_V0.7180.87
412_R416_G0.7170.87
37_H48_P0.7150.87
410_Y414_E0.7030.86
274_A281_A0.7030.86
90_A97_V0.7030.86
284_S288_S0.7000.86
293_H308_Y0.7000.86
372_L398_L0.6990.86
504_L507_Y0.6970.85
5_I97_V0.6970.85
291_A324_T0.6960.85
125_T157_A0.6960.85
166_D195_R0.6960.85
409_I422_L0.6950.85
161_A202_E0.6950.85
168_V187_M0.6940.85
296_L300_A0.6910.85
402_V411_L0.6910.85
10_I13_L0.6910.85
24_D316_D0.6910.85
165_W193_Q0.6900.85
376_L395_A0.6900.85
485_F490_N0.6880.85
323_E401_Q0.6860.85
272_A275_Q0.6850.84
262_L305_I0.6840.84
367_P370_A0.6840.84
204_V223_L0.6830.84
534_T537_D0.6830.84
507_Y512_N0.6820.84
554_L557_R0.6810.84
264_V270_V0.6810.84
499_T503_L0.6780.84
122_G172_F0.6770.84
537_D542_M0.6770.84
533_Q536_T0.6760.84
31_K36_F0.6750.84
186_G199_R0.6750.84
108_I112_Q0.6750.84
489_V492_C0.6750.84
124_N218_F0.6740.83
136_A204_V0.6740.83
59_Y72_D0.6730.83
20_V24_D0.6730.83
276_Y350_V0.6730.83
353_E360_A0.6720.83
409_I425_S0.6720.83
557_R560_T0.6720.83
74_L78_D0.6710.83
476_E479_L0.6710.83
558_E562_G0.6690.83
288_S306_C0.6680.83
390_R393_T0.6670.83
91_A96_E0.6670.83
500_T503_L0.6670.83
294_I333_R0.6660.83
23_I38_A0.6640.83
336_R384_T0.6630.82
288_S318_A0.6620.82
37_H47_T0.6620.82
127_Y198_D0.6620.82
28_K38_A0.6610.82
293_H296_L0.6600.82
391_L394_L0.6570.82
208_I217_G0.6570.82
451_M478_K0.6560.82
18_D36_F0.6540.82
258_P279_N0.6540.82
538_S542_M0.6540.82
388_R410_Y0.6530.82
5_I86_V0.6530.82
208_I267_Y0.6520.81
554_L558_E0.6520.81
376_L391_L0.6520.81
261_L301_T0.6510.81
391_L419_L0.6510.81
190_T195_R0.6500.81
75_M83_V0.6490.81
424_D427_L0.6480.81
179_R188_L0.6470.81
530_I538_S0.6460.81
561_H564_S0.6450.81
208_I285_L0.6440.81
51_T60_H0.6440.81
531_A534_T0.6440.81
315_R375_S0.6430.81
246_Y270_V0.6420.80
273_L281_A0.6420.80
140_R204_V0.6420.80
259_N301_T0.6390.80
45_E49_S0.6380.80
559_R562_G0.6370.80
206_F271_V0.6360.80
527_D531_A0.6360.80
69_N75_M0.6350.80
515_T518_K0.6350.80
483_G488_L0.6340.80
560_T564_S0.6320.79
487_E491_T0.6310.79
323_E372_L0.6310.79
119_L187_M0.6300.79
349_L361_R0.6300.79
5_I17_T0.6300.79
310_G346_P0.6290.79
253_Q257_E0.6290.79
51_T69_N0.6290.79
30_K33_G0.6280.79
38_A77_Y0.6280.79
459_V519_L0.6280.79
107_Q111_H0.6260.79
553_E556_A0.6260.79
364_Q463_E0.6260.79
410_Y413_Q0.6260.79
28_K57_Q0.6250.79
165_W189_V0.6240.79
382_L387_G0.6240.79
298_F331_D0.6220.78
474_L477_N0.6220.78
264_V278_I0.6220.78
341_P344_E0.6210.78
21_D39_C0.6210.78
219_G247_G0.6210.78
514_A517_E0.6200.78
123_L198_D0.6190.78
114_Q214_R0.6180.78
472_E477_N0.6170.78
296_L299_R0.6150.78
169_L196_S0.6150.78
396_L433_K0.6130.77
247_G285_L0.6130.77
55_E256_A0.6110.77
22_L89_L0.6090.77
498_L503_L0.6090.77
25_A38_A0.6090.77
13_L70_A0.6080.77
258_P280_Y0.6060.77
260_R365_A0.6060.77
454_L538_S0.6060.77
339_F374_N0.6060.77
7_R14_L0.6040.76
326_L401_Q0.6040.76
224_G227_T0.6020.76
532_E536_T0.6010.76
402_V407_L0.6010.76
63_G66_A0.6000.76
495_Q502_Q0.6000.76
469_P472_E0.5990.76
405_E408_R0.5990.76
560_T565_N0.5980.76
164_G202_E0.5980.76
306_C337_F0.5970.75
119_L172_F0.5970.75
60_H74_L0.5960.75
539_L542_M0.5960.75
130_S167_N0.5960.75
544_D548_E0.5950.75
216_I238_I0.5940.75
6_P9_F0.5930.75
485_F493_L0.5930.75
405_E409_I0.5920.75
254_D257_E0.5910.75
211_K252_Q0.5900.75
407_L410_Y0.5900.75
429_R433_K0.5890.74
310_G361_R0.5880.74
187_M205_M0.5880.74
531_A537_D0.5870.74
200_F231_L0.5860.74
75_M80_L0.5860.74
110_R114_Q0.5850.74
45_E60_H0.5830.74
272_A281_A0.5830.74
217_G247_G0.5820.74
350_V354_G0.5820.74
385_P389_A0.5820.74
154_A157_A0.5820.74
244_Q248_L0.5810.73
208_I228_P0.5790.73
278_I362_M0.5790.73
428_E431_M0.5780.73
307_C338_M0.5770.73
426_Q430_L0.5770.73
245_L282_V0.5760.73
400_S408_R0.5760.73
394_L397_P0.5730.72
320_R323_E0.5730.72
482_L487_E0.5730.72
272_A351_R0.5720.72
325_A337_F0.5720.72
39_C48_P0.5710.72
541_H545_S0.5700.72
412_R423_D0.5700.72
499_T504_L0.5700.72
108_I111_H0.5700.72
181_S185_A0.5690.72
247_G264_V0.5670.72
168_V198_D0.5660.72
377_M382_L0.5650.71
22_L73_F0.5640.71
81_E88_E0.5620.71
483_G487_E0.5610.71
200_F233_S0.5610.71
545_S548_E0.5600.71
113_R237_D0.5590.71
160_F204_V0.5590.71
291_A295_Q0.5590.71
502_Q505_E0.5580.70
116_L120_M0.5580.70
205_M218_F0.5580.70
198_D201_R0.5560.70
103_S108_I0.5560.70
308_Y369_S0.5560.70
165_W198_D0.5560.70
191_N196_S0.5560.70
51_T59_Y0.5550.70
428_E441_R0.5550.70
179_R182_L0.5540.70
177_E185_A0.5530.70
272_A350_V0.5530.70
380_V391_L0.5530.70
310_G339_F0.5510.70
270_V274_A0.5500.69
81_E456_G0.5500.69
112_Q237_D0.5490.69
23_I59_Y0.5480.69
225_N228_P0.5470.69
75_M82_F0.5460.69
481_G487_E0.5460.69
145_K225_N0.5450.69
458_L468_V0.5450.69
78_D252_Q0.5450.69
4_R7_R0.5450.69
450_T454_L0.5450.69
424_D428_E0.5440.69
268_M347_D0.5420.68
547_L554_L0.5420.68
206_F270_V0.5410.68
5_I100_E0.5410.68
211_K300_A0.5410.68
491_T503_L0.5410.68
173_G176_P0.5400.68
496_P499_T0.5400.68
469_P493_L0.5400.68
239_F244_Q0.5400.68
507_Y516_L0.5390.68
448_R533_Q0.5390.68
551_Q557_R0.5390.68
540_N546_L0.5390.68
165_W192_D0.5380.68
451_M481_G0.5380.68
453_I534_T0.5380.68
334_Q390_R0.5370.68
425_S429_R0.5370.68
247_G267_Y0.5360.67
555_I558_E0.5360.67
156_F271_V0.5350.67
318_A322_L0.5350.67
125_T175_N0.5350.67
158_I206_F0.5350.67
455_I485_F0.5330.67
396_L426_Q0.5330.67
13_L90_A0.5330.67
305_I362_M0.5330.67
209_R310_G0.5330.67
71_I95_L0.5320.67
554_L561_H0.5310.67
119_L122_G0.5310.67
152_V155_R0.5310.67
400_S433_K0.5300.67
287_T310_G0.5300.67
294_I372_L0.5290.66
222_V268_M0.5280.66
370_A374_N0.5280.66
273_L307_C0.5280.66
417_N423_D0.5270.66
7_R10_I0.5270.66
258_P301_T0.5270.66
495_Q498_L0.5260.66
19_I35_N0.5250.66
496_P500_T0.5250.66
51_T56_K0.5250.66
505_E513_A0.5250.66
39_C44_N0.5240.66
148_L272_A0.5220.65
20_V53_N0.5220.65
392_S406_T0.5210.65
531_A538_S0.5210.65
488_L492_C0.5200.65
71_I77_Y0.5190.65
19_I23_I0.5180.65
188_L198_D0.5180.65
161_A201_R0.5180.65
125_T128_Q0.5170.65
65_G316_D0.5170.65
385_P407_L0.5170.65
20_V57_Q0.5160.65
23_I70_A0.5160.65
374_N378_P0.5150.64
255_N259_N0.5150.64
250_E274_A0.5140.64
111_H184_D0.5140.64
120_M188_L0.5130.64
243_R318_A0.5120.64
231_L285_L0.5110.64
409_I423_D0.5110.64
404_G429_R0.5110.64
500_T504_L0.5110.64
113_R210_D0.5110.64
528_K531_A0.5100.64
8_V11_N0.5090.63
27_V77_Y0.5090.63
24_D38_A0.5080.63
342_D352_K0.5070.63
271_V350_V0.5070.63
255_N258_P0.5070.63
201_R205_M0.5070.63
297_L304_V0.5070.63
326_L337_F0.5060.63
217_G239_F0.5060.63
529_N532_E0.5060.63
118_Q121_D0.5060.63
503_L506_H0.5050.63
369_S386_D0.5050.63
51_T67_H0.5050.63
392_S426_Q0.5050.63
371_F414_E0.5040.63
404_G407_L0.5040.63
476_E480_P0.5010.62
376_L398_L0.5010.62
270_V287_T0.5000.62
27_V52_V0.5000.62
479_L484_L0.5000.62
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2au3A 1 0.6919 100 0.344 Contact Map
1dd9A 1 0.5318 100 0.506 Contact Map
4edgA 1 0.5473 100 0.527 Contact Map
1nuiA 1 0.4045 100 0.746 Contact Map
1q57A 3 0.6403 100 0.781 Contact Map
1d0qA 2 0.1756 100 0.79 Contact Map
1t6t1 2 0.1756 100 0.843 Contact Map
2fcjA 2 0.1962 98.9 0.934 Contact Map
2r6aC 1 0.2358 98.5 0.941 Contact Map
1t3wA 4 0.2324 98.2 0.946 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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