GREMLIN Database
CYOB - Cytochrome bo(3) ubiquinol oxidase subunit 1
UniProt: P0ABI8 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10179
Length: 663 (520)
Sequences: 3483 (1056)
Seq/√Len: 46.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
471_L498_A5.5781.00
301_I434_A5.2511.00
64_V146_F4.6531.00
379_S453_G4.2721.00
297_V435_G4.0981.00
401_L416_L3.9221.00
440_W519_S3.8541.00
221_T224_K3.7671.00
68_M153_V3.7341.00
94_L102_I3.5941.00
231_A320_T3.5631.00
227_V310_L3.5331.00
306_S370_M3.4671.00
212_I233_L3.3941.00
379_S450_E3.3891.00
65_A118_F3.3841.00
234_C324_T3.2781.00
294_V431_G3.2651.00
75_D102_I2.9881.00
127_V212_I2.8691.00
313_Y317_V2.8201.00
59_I125_L2.8191.00
337_T411_H2.7011.00
213_L222_M2.6681.00
370_M381_M2.6391.00
222_M225_M2.6061.00
422_N465_F2.5871.00
168_T187_V2.5451.00
304_T438_Y2.5081.00
172_A275_Y2.4951.00
326_L355_I2.4561.00
466_V501_G2.3911.00
451_T455_R2.3701.00
305_F438_Y2.3661.00
386_G461_I2.3461.00
78_M94_L2.3151.00
433_F512_L2.3111.00
370_M385_I2.2821.00
437_T456_A2.2321.00
302_A388_I2.2261.00
449_N518_V2.2241.00
47_E56_R2.2241.00
81_S503_V2.2161.00
383_W456_A2.1961.00
466_V497_I2.1671.00
97_H101_Q2.1621.00
450_E454_K2.1601.00
526_N529_L2.1491.00
356_A399_V2.1441.00
442_K545_S2.1331.00
463_G504_L2.1151.00
194_L250_V2.0520.99
108_V190_W2.0410.99
96_P484_S2.0100.99
492_H496_M2.0040.99
459_F508_G2.0000.99
126_V438_Y1.9920.99
301_I435_G1.9770.99
452_W511_C1.9700.99
297_V301_I1.9700.99
234_C321_V1.9540.99
86_A492_H1.9270.99
78_M102_I1.9180.99
400_L415_F1.9170.99
456_A512_L1.9150.99
406_A410_L1.9100.99
283_G286_E1.9090.99
299_S366_W1.8800.99
459_F511_C1.8790.99
108_V172_A1.8240.99
282_W286_E1.8050.99
474_L494_M1.8010.99
242_S328_F1.7760.99
290_L424_I1.7690.98
212_I225_M1.7690.98
500_S504_L1.7570.98
452_W514_I1.7510.98
188_D257_R1.7350.98
295_F359_T1.7280.98
64_V149_T1.7140.98
146_F150_V1.7120.98
77_I499_A1.7050.98
307_R376_V1.7000.98
276_I412_N1.6930.98
171_L279_I1.6840.98
72_G109_I1.6810.98
452_W455_R1.6800.98
70_L513_V1.6700.98
518_V522_D1.6660.98
390_T465_F1.6610.98
205_G240_I1.6600.98
256_D261_T1.6340.97
209_F233_L1.6190.97
431_G434_A1.6060.97
209_F240_I1.6050.97
64_V150_V1.6020.97
168_T177_S1.6020.97
291_I295_F1.5890.97
242_S289_I1.5780.97
216_R219_G1.5740.97
174_P275_Y1.5650.97
130_Q229_T1.5600.97
74_A78_M1.5560.97
45_W49_L1.5540.96
141_L203_L1.5490.96
469_M473_A1.5450.96
79_M102_I1.5350.96
245_I281_A1.5280.96
84_A496_M1.5270.96
447_K529_L1.5160.96
375_I381_M1.5060.96
352_T402_A1.5030.96
301_I384_T1.4970.96
62_I443_A1.4790.95
383_W433_F1.4630.95
456_A508_G1.4610.95
305_F380_A1.4520.95
220_M226_P1.4510.95
114_V429_V1.4410.95
252_L264_F1.4280.94
78_M93_F1.4170.94
177_S253_L1.4160.94
456_A460_W1.4030.94
316_L320_T1.3960.94
384_T434_A1.3940.94
459_F507_L1.3920.94
418_A472_Y1.3660.93
302_A370_M1.3640.93
518_V527_R1.3530.93
436_M512_L1.3510.92
316_L319_A1.3490.92
543_T551_N1.3470.92
479_M495_L1.3460.92
500_S503_V1.3270.92
212_I229_T1.3180.92
220_M225_M1.3150.91
98_H102_I1.3120.91
239_I243_F1.3120.91
126_V443_A1.3090.91
544_S547_P1.3040.91
550_Y553_A1.3020.91
213_L237_V1.3020.91
77_I502_A1.2980.91
51_S143_N1.2890.91
213_L233_L1.2870.91
503_V507_L1.2870.91
113_F153_V1.2850.90
89_G485_Q1.2810.90
467_A505_I1.2790.90
323_I362_K1.2710.90
386_G457_F1.2690.90
228_F232_S1.2640.90
295_F360_G1.2610.90
426_G464_F1.2500.89
451_T454_K1.2480.89
291_I427_G1.2450.89
249_T275_Y1.2430.89
108_V275_Y1.2420.89
382_L457_F1.2390.89
297_V439_W1.2360.89
172_A177_S1.2340.89
143_N147_W1.2310.88
218_P555_V1.2250.88
77_I506_A1.2220.88
305_F381_M1.2190.88
379_S454_K1.2160.88
303_A310_L1.2160.88
48_W60_M1.1990.87
166_A190_W1.1970.87
437_T453_G1.1940.87
168_T172_A1.1930.87
262_H265_T1.1900.87
113_F197_S1.1850.86
301_I380_A1.1830.86
174_P177_S1.1830.86
514_I518_V1.1830.86
51_S56_R1.1810.86
422_N469_M1.1800.86
441_P447_K1.1800.86
544_S548_P1.1790.86
506_A510_L1.1770.86
66_I70_L1.1760.86
174_P253_L1.1760.86
545_S548_P1.1720.86
446_F526_N1.1690.86
238_L352_T1.1690.86
446_F519_S1.1670.86
560_E563_A1.1640.85
127_V229_T1.1600.85
543_T547_P1.1560.85
456_A509_I1.1500.85
115_A424_I1.1420.84
59_I443_A1.1410.84
460_W508_G1.1350.84
71_R157_N1.1300.84
295_F366_W1.1290.84
255_L261_T1.1270.84
172_A187_V1.1240.83
152_G193_S1.1230.83
127_V131_I1.1230.83
349_G404_P1.1190.83
241_A328_F1.1190.83
473_A494_M1.1100.83
543_T552_F1.1090.83
45_W60_M1.1050.82
465_F469_M1.1050.82
436_M516_M1.1030.82
171_L411_H1.1030.82
105_A160_L1.1020.82
234_C320_T1.0990.82
460_W505_I1.0970.82
433_F456_A1.0970.82
119_V432_C1.0970.82
298_F387_F1.0940.82
298_F302_A1.0900.81
383_W437_T1.0900.81
370_M375_I1.0870.81
217_A555_V1.0870.81
223_F318_W1.0860.81
124_N207_N1.0850.81
58_G121_G1.0810.81
467_A502_A1.0770.81
71_R109_I1.0750.81
480_T483_L1.0740.80
120_I205_G1.0660.80
493_T497_I1.0660.80
46_K50_T1.0590.80
537_R562_D1.0580.79
356_A362_K1.0470.79
158_V189_Y1.0460.79
85_L91_A1.0420.78
514_I517_Y1.0370.78
299_S362_K1.0360.78
62_I118_F1.0300.78
235_A289_I1.0260.77
43_Y47_E1.0250.77
119_V294_V1.0250.77
188_D258_Y1.0240.77
291_I428_V1.0220.77
198_G247_T1.0200.77
109_I157_N1.0190.77
116_M283_G1.0170.77
99_Y103_F1.0140.76
77_I503_V1.0120.76
362_K366_W1.0090.76
380_A438_Y1.0090.76
317_V320_T1.0070.76
510_L514_I1.0070.76
195_Q250_V1.0040.76
422_N472_Y1.0030.76
231_A292_L1.0030.76
337_T408_F1.0030.76
125_L443_A1.0020.76
532_D536_G1.0000.75
496_M500_S0.9980.75
205_G236_N0.9960.75
414_L479_M0.9940.75
97_H167_Q0.9880.75
219_G224_K0.9880.75
305_F534_W0.9850.74
201_T239_I0.9820.74
112_F282_W0.9820.74
352_T401_L0.9790.74
124_N142_N0.9750.74
138_F210_V0.9720.73
224_K558_V0.9710.73
450_E453_G0.9700.73
227_V316_L0.9700.73
123_M232_S0.9640.73
132_G539_L0.9640.73
362_K365_N0.9610.73
69_L114_V0.9560.72
71_R75_D0.9530.72
471_L474_L0.9530.72
316_L365_N0.9530.72
399_V402_A0.9510.72
222_M233_L0.9500.72
83_Q495_L0.9490.72
380_A448_L0.9480.71
72_G111_I0.9430.71
145_S204_T0.9420.71
562_D565_W0.9420.71
156_V193_S0.9380.71
53_D56_R0.9330.70
307_R535_G0.9330.70
353_M402_A0.9290.70
529_L545_S0.9290.70
313_Y453_G0.9280.70
377_F385_I0.9270.70
172_A190_W0.9260.70
528_D545_S0.9240.70
69_L76_A0.9220.69
440_W448_L0.9190.69
145_S203_L0.9170.69
209_F237_V0.9170.69
547_P552_F0.9160.69
379_S382_L0.9100.68
94_L98_H0.9080.68
42_T46_K0.9070.68
456_A511_C0.9070.68
83_Q414_L0.9060.68
115_A429_V0.9040.68
531_G544_S0.8970.67
115_A290_L0.8960.67
48_W56_R0.8960.67
149_T200_G0.8950.67
446_F520_I0.8940.67
152_G228_F0.8920.67
447_K530_T0.8910.67
216_R224_K0.8910.67
286_E290_L0.8900.67
462_I504_L0.8890.67
453_G515_Q0.8850.66
449_N452_W0.8840.66
470_P494_M0.8840.66
243_F286_E0.8820.66
463_G508_G0.8790.66
225_M229_T0.8750.65
199_I203_L0.8750.65
195_Q251_A0.8730.65
382_L454_K0.8730.65
197_S200_G0.8720.65
517_Y521_R0.8710.65
414_L495_L0.8680.65
208_F212_I0.8670.65
111_I115_A0.8670.65
82_Q485_Q0.8660.64
66_I513_V0.8650.64
131_I229_T0.8640.64
359_T362_K0.8620.64
424_I428_V0.8570.64
40_K43_Y0.8570.64
162_V499_A0.8570.64
301_I431_G0.8510.63
82_Q92_G0.8500.63
79_M107_G0.8470.63
226_P229_T0.8460.63
295_F362_K0.8450.63
202_T247_T0.8440.62
132_G217_A0.8440.62
115_A428_V0.8430.62
60_M146_F0.8410.62
234_C237_V0.8390.62
282_W290_L0.8390.62
136_V149_T0.8370.62
262_H268_M0.8370.62
530_T545_S0.8330.61
302_A306_S0.8330.61
144_L148_F0.8320.61
283_G290_L0.8310.61
310_L313_Y0.8310.61
243_F283_G0.8310.61
62_I121_G0.8290.61
237_V324_T0.8280.61
255_L259_L0.8280.61
305_F378_H0.8230.60
401_L410_L0.8230.60
81_S499_A0.8220.60
295_F319_A0.8160.60
220_M536_G0.8150.60
81_S93_F0.8130.60
327_S412_N0.8110.59
118_F433_F0.8090.59
498_A501_G0.8090.59
364_F386_G0.8070.59
114_V118_F0.8020.58
116_M286_E0.8010.58
377_F381_M0.7920.58
120_I123_M0.7920.58
243_F282_W0.7920.58
325_V329_I0.7910.57
315_S411_H0.7910.57
121_G246_L0.7890.57
560_E564_F0.7860.57
345_N408_F0.7770.56
73_F509_I0.7740.56
141_L145_S0.7740.56
387_F423_V0.7740.56
239_I286_E0.7740.56
440_W444_F0.7720.56
119_V289_I0.7720.56
67_V71_R0.7720.56
195_Q254_T0.7710.55
298_F384_T0.7700.55
366_W387_F0.7660.55
315_S319_A0.7640.55
400_L406_A0.7630.55
456_A515_Q0.7610.55
127_V232_S0.7560.54
111_I290_L0.7550.54
249_T279_I0.7550.54
460_W509_I0.7490.53
390_T461_I0.7490.53
191_I254_T0.7470.53
432_C436_M0.7460.53
56_R60_M0.7440.53
497_I501_G0.7430.53
416_L420_F0.7430.53
389_V393_V0.7420.53
442_K531_G0.7420.53
379_S383_W0.7400.52
200_G271_N0.7400.52
418_A471_L0.7400.52
277_N335_F0.7390.52
349_G403_V0.7390.52
462_I466_V0.7380.52
116_M282_W0.7370.52
499_A503_V0.7360.52
378_H438_Y0.7340.52
341_G345_N0.7330.52
291_I366_W0.7320.52
198_G362_K0.7320.52
332_L340_A0.7310.52
503_V506_A0.7300.51
119_V144_L0.7280.51
218_P313_Y0.7280.51
126_V130_Q0.7250.51
105_A166_A0.7250.51
444_F447_K0.7230.51
463_G501_G0.7230.51
69_L429_V0.7230.51
206_I210_V0.7220.51
277_N472_Y0.7210.51
433_F460_W0.7190.50
70_L74_A0.7190.50
442_K543_T0.7160.50
89_G93_F0.7150.50
256_D355_I0.7150.50
120_I239_I0.7140.50
459_F504_L0.7130.50
119_V428_V0.7130.50
64_V153_V0.7120.50
208_F232_S0.7120.50
397_T401_L0.7120.50
252_L263_F0.7100.49
124_N135_D0.7100.49
455_R511_C0.7080.49
76_A426_G0.7060.49
306_S415_F0.7060.49
123_M208_F0.7060.49
449_N514_I0.7050.49
238_L290_L0.7030.49
122_L297_V0.7030.49
85_L496_M0.7030.49
311_F362_K0.7030.49
466_V504_L0.7000.49
335_F412_N0.7000.49
513_V517_Y0.6990.48
306_S375_I0.6980.48
363_I388_I0.6980.48
116_M239_I0.6950.48
363_I392_S0.6950.48
319_A322_C0.6910.48
414_L499_A0.6910.48
141_L206_I0.6900.48
424_I427_G0.6900.48
405_G424_I0.6890.47
104_T108_V0.6890.47
140_F271_N0.6860.47
219_G450_E0.6860.47
73_F506_A0.6850.47
445_G547_P0.6850.47
178_G181_Y0.6840.47
304_T538_T0.6840.47
291_I424_I0.6830.47
353_M366_W0.6830.47
256_D262_H0.6820.47
125_L149_T0.6820.47
76_A103_F0.6810.47
239_I283_G0.6810.47
299_S356_A0.6800.47
225_M233_L0.6800.47
177_S275_Y0.6790.46
382_L458_W0.6790.46
532_D535_G0.6780.46
237_V322_C0.6780.46
73_F76_A0.6760.46
442_K534_W0.6760.46
433_F437_T0.6750.46
136_V208_F0.6740.46
54_H129_L0.6740.46
291_I423_V0.6730.46
376_V535_G0.6730.46
83_Q486_Q0.6720.46
311_F323_I0.6710.46
370_M373_G0.6710.46
442_K547_P0.6710.46
54_H137_A0.6710.46
171_L412_N0.6700.46
231_A310_L0.6690.45
428_V432_C0.6670.45
154_I158_V0.6660.45
529_L533_P0.6660.45
306_S381_M0.6650.45
136_V355_I0.6640.45
360_G399_V0.6640.45
243_F317_V0.6640.45
433_F509_I0.6620.45
392_S396_M0.6610.45
116_M201_T0.6610.45
290_L428_V0.6610.45
121_G432_C0.6600.45
298_F431_G0.6600.45
381_M396_M0.6590.44
254_T258_Y0.6590.44
79_M99_Y0.6580.44
373_G534_W0.6580.44
100_D117_P0.6570.44
100_D414_L0.6570.44
447_K519_S0.6560.44
195_Q247_T0.6560.44
238_L319_A0.6550.44
486_Q491_F0.6550.44
223_F310_L0.6540.44
316_L361_V0.6530.44
227_V480_T0.6530.44
379_S386_G0.6530.44
449_N519_S0.6500.44
380_A447_K0.6500.44
99_Y102_I0.6500.44
114_V232_S0.6500.44
534_W545_S0.6500.44
378_H454_K0.6490.44
218_P545_S0.6470.43
119_V297_V0.6450.43
483_L495_L0.6450.43
219_G453_G0.6440.43
367_L371_Y0.6400.43
273_M412_N0.6400.43
206_I411_H0.6400.43
176_L286_E0.6390.43
526_N530_T0.6390.43
205_G242_S0.6390.43
511_C515_Q0.6380.42
216_R220_M0.6370.42
201_T320_T0.6370.42
291_I362_K0.6370.42
217_A220_M0.6360.42
370_M438_Y0.6350.42
250_V254_T0.6330.42
118_F432_C0.6320.42
442_K450_E0.6320.42
444_F519_S0.6320.42
239_I282_W0.6320.42
383_W455_R0.6310.42
447_K526_N0.6290.42
158_V497_I0.6290.42
113_F152_G0.6280.41
371_Y534_W0.6280.41
304_T534_W0.6270.41
488_D492_H0.6260.41
166_A187_V0.6260.41
277_N412_N0.6250.41
126_V396_M0.6250.41
236_N289_I0.6220.41
272_M276_I0.6200.41
396_M426_G0.6200.41
208_F352_T0.6190.41
454_K458_W0.6190.41
124_N330_V0.6170.40
112_F290_L0.6160.40
251_A494_M0.6160.40
105_A190_W0.6150.40
338_M412_N0.6140.40
176_L239_I0.6140.40
373_G533_P0.6130.40
308_K362_K0.6120.40
168_T174_P0.6100.40
383_W512_L0.6100.40
447_K533_P0.6090.40
144_L203_L0.6090.40
448_L516_M0.6080.40
52_V143_N0.6070.39
219_G539_L0.6070.39
70_L383_W0.6070.39
41_W45_W0.6060.39
299_S353_M0.6050.39
405_G410_L0.6050.39
531_G543_T0.6040.39
67_V154_I0.6030.39
159_S162_V0.6030.39
114_V384_T0.6030.39
381_M384_T0.6020.39
40_K47_E0.6020.39
528_D531_G0.6020.39
399_V406_A0.6010.39
81_S306_S0.6010.39
273_M338_M0.6000.39
234_C326_L0.6000.39
135_D142_N0.5990.39
397_T420_F0.5990.39
125_L383_W0.5980.39
194_L246_L0.5980.39
95_P98_H0.5970.39
112_F423_V0.5970.39
336_F405_G0.5960.38
249_T519_S0.5940.38
142_N211_T0.5930.38
234_C282_W0.5930.38
151_V154_I0.5930.38
201_T272_M0.5920.38
44_L47_E0.5920.38
192_W251_A0.5910.38
111_I116_M0.5910.38
200_G309_R0.5910.38
109_I153_V0.5910.38
508_G538_T0.5890.38
79_M499_A0.5890.38
55_K551_N0.5880.38
118_F436_M0.5860.38
417_I476_F0.5850.37
394_G423_V0.5840.37
495_L499_A0.5830.37
159_S166_A0.5820.37
145_S208_F0.5800.37
322_C547_P0.5800.37
237_V321_V0.5800.37
352_T522_D0.5790.37
61_Y360_G0.5770.37
388_I469_M0.5770.37
167_Q182_S0.5760.37
407_D416_L0.5760.37
459_F496_M0.5760.37
356_A359_T0.5760.37
486_Q492_H0.5760.37
290_L317_V0.5750.37
561_R564_F0.5750.37
85_L89_G0.5740.36
303_A533_P0.5740.36
305_F373_G0.5730.36
442_K552_F0.5730.36
380_A434_A0.5730.36
236_N508_G0.5720.36
70_L509_I0.5710.36
313_Y534_W0.5710.36
302_A469_M0.5710.36
216_R255_L0.5700.36
311_F365_N0.5690.36
377_F438_Y0.5680.36
363_I423_V0.5680.36
63_I154_I0.5680.36
136_V204_T0.5670.36
267_D317_V0.5670.36
122_L210_V0.5660.36
289_I402_A0.5660.36
41_W44_L0.5660.36
66_I516_M0.5650.36
72_G107_G0.5650.36
441_P519_S0.5650.36
336_F404_P0.5650.36
114_V436_M0.5640.36
63_I402_A0.5630.35
221_T273_M0.5630.35
63_I66_I0.5620.35
357_I484_S0.5610.35
392_S427_G0.5600.35
137_A211_T0.5600.35
192_W196_L0.5580.35
327_S509_I0.5570.35
349_G498_A0.5550.35
141_L210_V0.5540.35
169_G226_P0.5540.35
511_C514_I0.5540.35
207_N362_K0.5540.35
386_G430_F0.5520.34
137_A215_M0.5520.34
324_T372_Q0.5510.34
248_V252_L0.5510.34
152_G197_S0.5510.34
102_I399_V0.5510.34
115_A432_C0.5500.34
150_V154_I0.5500.34
296_G299_S0.5490.34
134_R555_V0.5490.34
142_N323_I0.5480.34
271_N274_M0.5480.34
227_V411_H0.5480.34
73_F77_I0.5470.34
413_S491_F0.5470.34
208_F236_N0.5470.34
435_G521_R0.5470.34
216_R544_S0.5470.34
458_W462_I0.5470.34
264_F541_W0.5450.34
328_F392_S0.5440.34
302_A384_T0.5440.34
146_F149_T0.5440.34
114_V433_F0.5430.34
329_I541_W0.5430.34
183_P388_I0.5430.34
59_I63_I0.5430.34
441_P449_N0.5420.34
234_C286_E0.5410.33
291_I299_S0.5410.33
312_G365_N0.5400.33
219_G533_P0.5400.33
440_W446_F0.5400.33
83_Q499_A0.5380.33
202_T264_F0.5370.33
308_K311_F0.5370.33
193_S197_S0.5370.33
390_T413_S0.5370.33
81_S240_I0.5370.33
305_F548_P0.5370.33
191_I275_Y0.5360.33
188_D283_G0.5350.33
210_V240_I0.5350.33
449_N522_D0.5350.33
112_F392_S0.5330.33
352_T420_F0.5330.33
437_T515_Q0.5330.33
155_L189_Y0.5320.33
379_S458_W0.5320.33
54_H58_G0.5310.33
303_A405_G0.5310.33
350_I406_A0.5300.33
442_K544_S0.5290.32
387_F418_A0.5290.32
70_L451_T0.5280.32
221_T548_P0.5280.32
302_A316_L0.5280.32
155_L327_S0.5280.32
57_L142_N0.5270.32
59_I85_L0.5260.32
76_A425_I0.5250.32
294_V298_F0.5240.32
522_D527_R0.5240.32
466_V470_P0.5230.32
471_L483_L0.5230.32
335_F472_Y0.5230.32
121_G152_G0.5230.32
317_V532_D0.5230.32
435_G503_V0.5220.32
247_T362_K0.5220.32
75_D160_L0.5210.32
62_I491_F0.5210.32
132_G442_K0.5210.32
160_L275_Y0.5200.32
116_M243_F0.5200.32
48_W51_S0.5200.32
198_G207_N0.5200.32
72_G454_K0.5190.32
392_S413_S0.5190.32
259_L374_R0.5180.31
296_G366_W0.5170.31
129_L548_P0.5170.31
380_A452_W0.5170.31
217_A224_K0.5160.31
433_F436_M0.5160.31
43_Y46_K0.5150.31
75_D157_N0.5150.31
77_I91_A0.5140.31
55_K142_N0.5140.31
388_I561_R0.5120.31
49_L400_L0.5120.31
342_A380_A0.5120.31
434_A541_W0.5120.31
249_T426_G0.5120.31
337_T500_S0.5110.31
207_N330_V0.5110.31
136_V252_L0.5110.31
323_I359_T0.5100.31
391_F427_G0.5100.31
46_K51_S0.5090.31
515_Q519_S0.5080.31
309_R314_T0.5080.31
373_G453_G0.5070.31
462_I510_L0.5070.31
214_K340_A0.5060.30
44_L49_L0.5050.30
76_A464_F0.5040.30
479_M486_Q0.5030.30
341_G344_V0.5030.30
442_K533_P0.5020.30
107_G420_F0.5020.30
543_T548_P0.5010.30
39_G43_Y0.5010.30
174_P407_D0.5000.30
349_G508_G0.5000.30
193_S252_L0.5000.30
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1fftA 1 0.7511 100 0.2 Contact Map
2yevA 1 0.911 100 0.315 Contact Map
2gsmA 1 0.7526 100 0.362 Contact Map
1v54A 1 0.7722 100 0.37 Contact Map
3s8fA 1 0.7798 100 0.487 Contact Map
3ayfA 2 0.7376 100 0.505 Contact Map
3mk7A 1 0.6637 100 0.532 Contact Map
3wfdB 1 0.6365 100 0.539 Contact Map
1v54C 1 0.1192 97.1 0.973 Contact Map
1qleC 1 0.1176 97 0.973 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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