FABF - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

FABF - 3-oxoacyl-[acyl-carrier-protein] synthase 2

UniProt:	P0AAI5	Sequences: MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12606
Length:	413 (395)
Sequences:	21144 (14008)
Seq/√Len:	704.8

ECOLI - FABF FABB
BACSU - FABF PKSF PKSN PKSL PKSJ PKSR PKSM

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
281_A	321_T	3.216	1.00
259_V	411_K	3.058	1.00
20_T	23_S	2.922	1.00
354_S	394_T	2.832	1.00
100_R	184_D	2.733	1.00
256_A	355_I	2.722	1.00
26_K	30_A	2.707	1.00
172_G	261_F	2.699	1.00
225_K	371_N	2.691	1.00
225_K	374_E	2.579	1.00
393_Y	411_K	2.534	1.00
362_A	385_A	2.472	1.00
4_R	245_E	2.435	1.00
255_Y	359_R	2.352	1.00
88_D	255_Y	2.333	1.00
85_A	240_V	2.292	1.00
243_E	246_H	2.251	1.00
223_W	303_A	2.232	1.00
29_L	362_A	2.231	1.00
27_A	34_G	2.187	1.00
81_A	236_A	2.125	1.00
27_A	32_Q	2.102	1.00
222_P	337_S	2.089	1.00
19_N	23_S	2.087	1.00
178_I	243_E	2.072	1.00
357_A	364_P	2.065	1.00
297_Q	393_Y	2.061	1.00
351_S	410_F	2.041	1.00
104_A	177_I	2.040	1.00
171_I	351_S	2.037	1.00
242_E	252_A	1.998	1.00
5_R	259_V	1.983	1.00
281_A	285_A	1.981	1.00
362_A	387_Q	1.942	1.00
226_E	371_N	1.938	1.00
176_R	180_Y	1.937	1.00
107_S	143_V	1.920	1.00
365_P	385_A	1.912	1.00
294_E	297_Q	1.895	1.00
331_L	386_R	1.879	1.00
35_I	52_G	1.861	1.00
83_V	87_Q	1.832	1.00
217_Q	228_D	1.810	1.00
82_G	147_L	1.809	1.00
242_E	250_R	1.808	1.00
63_I	71_M	1.805	1.00
82_G	187_V	1.790	1.00
102_G	186_M	1.787	1.00
37_L	50_F	1.781	1.00
293_I	393_Y	1.762	1.00
380_F	386_R	1.755	1.00
244_Y	248_K	1.730	1.00
100_R	286_N	1.730	1.00
15_S	349_V	1.729	1.00
105_I	238_M	1.717	1.00
237_G	348_A	1.684	1.00
226_E	370_D	1.680	1.00
363_V	382_P	1.669	1.00
36_S	55_K	1.667	1.00
356_L	359_R	1.665	1.00
356_L	360_D	1.664	1.00
246_H	249_K	1.653	1.00
8_V	351_S	1.652	1.00
175_A	258_L	1.649	1.00
37_L	49_K	1.644	1.00
281_A	322_I	1.643	1.00
189_G	238_M	1.627	1.00
24_T	335_T	1.621	1.00
183_A	186_M	1.611	1.00
233_G	342_L	1.597	1.00
8_V	355_I	1.595	1.00
351_S	396_C	1.585	1.00
33_S	219_A	1.580	1.00
175_A	179_A	1.568	1.00
12_G	81_A	1.568	1.00
239_L	351_S	1.568	1.00
106_G	166_S	1.559	1.00
253_K	359_R	1.558	1.00
148_T	157_S	1.558	1.00
335_T	349_V	1.553	1.00
177_I	183_A	1.542	1.00
176_R	182_D	1.526	1.00
78_G	147_L	1.514	1.00
301_V	319_V	1.512	1.00
224_D	369_L	1.504	1.00
187_V	240_V	1.500	1.00
4_R	243_E	1.499	1.00
331_L	380_F	1.497	1.00
81_A	238_M	1.489	1.00
259_V	393_Y	1.487	1.00
264_S	405_N	1.487	1.00
58_N	61_D	1.483	1.00
78_G	105_I	1.480	1.00
29_L	385_A	1.472	1.00
169_H	406_G	1.464	1.00
11_L	21_V	1.462	1.00
162_T	165_T	1.454	1.00
237_G	352_I	1.448	1.00
24_T	353_Y	1.445	1.00
73_A	77_Y	1.443	1.00
47_A	204_G	1.421	1.00
101_I	185_V	1.407	1.00
88_D	253_K	1.403	1.00
92_E	95_E	1.402	1.00
83_V	150_M	1.395	1.00
78_G	238_M	1.387	1.00
185_V	240_V	1.385	1.00
261_F	408_L	1.383	1.00
235_G	342_L	1.373	1.00
217_Q	221_R	1.369	1.00
176_R	179_A	1.365	1.00
102_G	183_A	1.363	1.00
337_S	367_I	1.362	1.00
331_L	363_V	1.357	1.00
158_I	173_H	1.353	1.00
298_I	393_Y	1.350	1.00
300_Y	363_V	1.345	1.00
154_R	282_L	1.336	1.00
331_L	382_P	1.331	1.00
361_Q	392_E	1.329	1.00
42_D	45_A	1.325	1.00
282_L	286_N	1.321	1.00
221_R	226_E	1.316	1.00
102_G	156_P	1.314	1.00
169_H	404_T	1.309	1.00
366_T	369_L	1.307	1.00
6_V	241_L	1.305	1.00
395_L	409_I	1.304	1.00
5_R	257_E	1.301	1.00
78_G	143_V	1.294	1.00
388_V	392_E	1.292	1.00
224_D	371_N	1.288	1.00
177_I	182_D	1.286	1.00
26_K	32_Q	1.285	1.00
316_A	332_V	1.282	1.00
4_R	7_V	1.273	1.00
144_A	159_S	1.272	1.00
39_D	42_D	1.272	1.00
224_D	370_D	1.271	1.00
97_N	152_G	1.265	1.00
17_V	34_G	1.264	1.00
6_V	175_A	1.263	1.00
264_S	283_A	1.260	1.00
337_S	366_T	1.255	1.00
255_Y	355_I	1.255	1.00
395_L	407_S	1.247	1.00
23_S	26_K	1.246	1.00
239_L	348_A	1.243	1.00
300_Y	333_S	1.239	1.00
26_K	29_L	1.237	1.00
363_V	388_V	1.237	1.00
145_G	402_G	1.234	1.00
369_L	372_P	1.232	1.00
358_L	410_F	1.231	1.00
11_L	352_I	1.224	1.00
184_D	246_H	1.208	1.00
210_S	228_D	1.204	1.00
397_N	407_S	1.194	1.00
285_A	289_R	1.181	1.00
339_T	349_V	1.180	1.00
13_M	21_V	1.180	1.00
262_G	283_A	1.180	1.00
105_I	189_G	1.161	1.00
169_H	263_M	1.158	1.00
262_G	287_A	1.155	1.00
342_L	349_V	1.151	1.00
300_Y	354_S	1.151	1.00
15_S	237_G	1.148	1.00
239_L	352_I	1.141	1.00
19_N	55_K	1.137	1.00
171_I	241_L	1.136	1.00
52_G	233_G	1.131	1.00
373_D	376_C	1.129	1.00
319_V	332_V	1.126	1.00
10_G	88_D	1.122	1.00
299_G	392_E	1.122	1.00
216_P	228_D	1.120	1.00
221_R	228_D	1.118	1.00
82_G	238_M	1.114	1.00
190_G	348_A	1.110	1.00
85_A	238_M	1.108	1.00
260_G	290_D	1.108	1.00
283_A	287_A	1.104	1.00
176_R	290_D	1.103	1.00
35_I	50_F	1.102	1.00
244_Y	257_E	1.100	1.00
22_E	88_D	1.093	1.00
168_V	406_G	1.089	1.00
28_L	353_Y	1.086	1.00
297_Q	390_G	1.084	1.00
157_S	265_S	1.081	1.00
369_L	381_V	1.070	1.00
335_T	339_T	1.068	1.00
33_S	368_N	1.066	1.00
11_L	255_Y	1.065	1.00
13_M	352_I	1.063	1.00
286_N	290_D	1.063	1.00
5_R	244_Y	1.060	1.00
25_W	360_D	1.059	1.00
338_M	367_I	1.054	1.00
370_D	383_H	1.052	1.00
354_S	358_L	1.052	1.00
174_A	188_A	1.051	1.00
316_A	376_C	1.051	1.00
61_D	83_V	1.050	1.00
288_L	298_I	1.040	1.00
293_I	297_Q	1.039	1.00
83_V	151_Y	1.037	1.00
179_A	290_D	1.034	1.00
284_M	322_I	1.029	1.00
288_L	295_A	1.027	1.00
13_M	24_T	1.026	1.00
85_A	187_V	1.021	1.00
148_T	265_S	1.021	1.00
317_Q	321_T	1.020	1.00
200_V	232_L	1.017	1.00
171_I	408_L	1.013	1.00
358_L	361_Q	1.011	1.00
299_G	388_V	1.005	1.00
296_S	326_A	1.000	1.00
323_F	395_L	0.990	1.00
178_I	241_L	0.990	1.00
382_P	386_R	0.989	1.00
218_A	370_D	0.983	1.00
160_I	173_H	0.983	1.00
372_P	378_L	0.982	1.00
369_L	383_H	0.982	1.00
86_M	151_Y	0.982	1.00
184_D	243_E	0.981	1.00
168_V	408_L	0.981	1.00
284_M	397_N	0.979	1.00
354_S	396_C	0.978	1.00
81_A	84_Q	0.977	1.00
309_P	375_G	0.971	1.00
142_M	272_S	0.967	1.00
284_M	395_L	0.964	1.00
12_G	85_A	0.962	1.00
25_W	364_P	0.956	1.00
120_T	123_M	0.956	1.00
9_T	242_E	0.955	1.00
299_G	390_G	0.953	1.00
104_A	186_M	0.953	1.00
172_G	182_D	0.951	1.00
313_K	317_Q	0.949	1.00
120_T	124_N	0.948	1.00
245_E	248_K	0.948	1.00
101_I	153_L	0.945	1.00
171_I	188_A	0.942	1.00
286_N	289_R	0.938	1.00
11_L	355_I	0.931	1.00
173_H	176_R	0.929	1.00
355_I	410_F	0.927	1.00
361_Q	390_G	0.927	1.00
288_L	323_F	0.925	1.00
378_L	381_V	0.920	1.00
232_L	343_L	0.917	1.00
175_A	290_D	0.916	1.00
119_H	123_M	0.913	1.00
257_E	411_K	0.908	1.00
388_V	391_M	0.907	1.00
379_D	386_R	0.906	1.00
247_A	254_I	0.904	1.00
29_L	360_D	0.904	1.00
54_V	77_Y	0.902	1.00
18_G	27_A	0.901	1.00
172_G	176_R	0.900	1.00
77_Y	236_A	0.899	1.00
167_G	348_A	0.898	1.00
174_A	186_M	0.893	1.00
7_V	257_E	0.892	1.00
22_E	26_K	0.891	1.00
31_G	365_P	0.887	1.00
303_A	332_V	0.887	1.00
350_E	396_C	0.885	1.00
15_S	352_I	0.884	1.00
302_N	350_E	0.880	1.00
235_G	349_V	0.876	1.00
175_A	261_F	0.875	1.00
20_T	84_Q	0.874	1.00
78_G	189_G	0.872	1.00
277_G	317_Q	0.871	1.00
288_L	293_I	0.869	1.00
278_A	281_A	0.866	1.00
305_G	311_G	0.860	1.00
162_T	169_H	0.859	1.00
86_M	187_V	0.858	1.00
7_V	244_Y	0.858	1.00
31_G	384_E	0.855	1.00
298_I	323_F	0.855	1.00
167_G	190_G	0.854	1.00
39_D	53_L	0.853	1.00
380_F	383_H	0.852	1.00
293_I	409_I	0.849	1.00
118_N	121_S	0.849	1.00
305_G	334_S	0.847	1.00
358_L	391_M	0.844	1.00
301_V	395_L	0.843	1.00
154_R	278_A	0.843	1.00
12_G	84_Q	0.839	1.00
11_L	88_D	0.839	1.00
316_A	380_F	0.834	1.00
24_T	339_T	0.834	1.00
287_A	409_I	0.832	1.00
14_L	84_Q	0.832	1.00
103_A	153_L	0.829	1.00
110_G	140_V	0.825	1.00
185_V	188_A	0.824	1.00
210_S	221_R	0.818	1.00
298_I	409_I	0.817	1.00
287_A	291_A	0.816	1.00
64_S	67_E	0.815	1.00
25_W	29_L	0.812	1.00
168_V	347_G	0.809	1.00
11_L	356_L	0.808	1.00
264_S	282_L	0.807	1.00
57_F	80_V	0.806	1.00
18_G	34_G	0.806	1.00
243_E	248_K	0.804	1.00
33_S	367_I	0.801	1.00
34_G	52_G	0.800	1.00
25_W	356_L	0.800	1.00
284_M	318_A	0.798	1.00
282_L	285_A	0.797	1.00
187_V	238_M	0.793	1.00
22_E	360_D	0.790	1.00
246_H	250_R	0.789	1.00
35_I	231_V	0.789	1.00
280_A	399_F	0.788	1.00
107_S	140_V	0.786	1.00
271_T	274_P	0.783	1.00
17_V	27_A	0.781	1.00
334_S	366_T	0.779	1.00
285_A	321_T	0.779	1.00
316_A	320_K	0.779	1.00
48_T	204_G	0.778	1.00
354_S	357_A	0.778	1.00
108_G	344_G	0.776	1.00
47_A	207_R	0.774	1.00
86_M	240_V	0.773	1.00
14_L	80_V	0.768	1.00
342_L	345_A	0.765	1.00
145_G	157_S	0.764	1.00
244_Y	254_I	0.760	1.00
278_A	282_L	0.760	1.00
323_F	330_V	0.759	1.00
270_M	274_P	0.758	1.00
82_G	85_A	0.757	1.00
201_G	204_G	0.756	1.00
304_H	308_T	0.755	1.00
7_V	254_I	0.755	1.00
104_A	183_A	0.755	1.00
259_V	293_I	0.750	1.00
284_M	288_L	0.747	1.00
43_T	49_K	0.747	1.00
299_G	393_Y	0.747	1.00
382_P	385_A	0.747	1.00
285_A	322_I	0.743	1.00
188_A	241_L	0.742	1.00
79_I	150_M	0.742	1.00
36_S	53_L	0.740	1.00
366_T	381_V	0.740	1.00
135_V	202_G	0.740	1.00
185_V	246_H	0.739	1.00
23_S	27_A	0.739	1.00
191_A	236_A	0.737	1.00
291_A	409_I	0.736	1.00
324_G	327_A	0.736	1.00
363_V	391_M	0.735	1.00
372_P	381_V	0.735	1.00
99_T	184_D	0.734	1.00
355_I	358_L	0.733	1.00
121_S	125_G	0.733	1.00
107_S	159_S	0.732	1.00
168_V	396_C	0.732	1.00
263_M	406_G	0.732	1.00
171_I	348_A	0.730	1.00
89_S	240_V	0.729	1.00
156_P	183_A	0.727	1.00
301_V	330_V	0.726	1.00
14_L	81_A	0.723	1.00
104_A	158_I	0.723	1.00
82_G	151_Y	0.720	1.00
182_D	290_D	0.720	1.00
284_M	319_V	0.719	1.00
27_A	30_A	0.719	1.00
256_A	410_F	0.714	1.00
264_S	286_N	0.711	1.00
285_A	325_E	0.709	1.00
308_T	311_G	0.708	1.00
288_L	409_I	0.706	1.00
21_V	356_L	0.704	1.00
19_N	56_D	0.704	1.00
96_E	101_I	0.701	1.00
74_F	191_A	0.700	1.00
99_T	154_R	0.700	1.00
302_N	353_Y	0.698	1.00
277_G	318_A	0.697	1.00
130_I	201_G	0.695	1.00
171_I	239_L	0.695	1.00
171_I	258_L	0.694	1.00
208_A	230_F	0.692	1.00
38_I	53_L	0.692	1.00
10_G	85_A	0.691	1.00
38_I	41_F	0.687	1.00
39_D	43_T	0.685	1.00
50_F	219_A	0.681	1.00
300_Y	394_T	0.678	1.00
17_V	36_S	0.678	1.00
40_H	73_A	0.678	1.00
103_A	147_L	0.677	1.00
277_G	281_A	0.673	1.00
248_K	254_I	0.671	1.00
355_I	359_R	0.670	1.00
168_V	398_S	0.668	1.00
283_A	407_S	0.668	1.00
310_A	314_A	0.666	1.00
313_K	375_G	0.665	1.00
153_L	187_V	0.663	1.00
317_Q	375_G	0.663	1.00
320_K	377_D	0.657	1.00
335_T	353_Y	0.656	1.00
38_I	200_V	0.655	1.00
21_V	88_D	0.655	1.00
28_L	356_L	0.654	1.00
320_K	324_G	0.654	1.00
258_L	408_L	0.653	1.00
203_F	208_A	0.652	1.00
5_R	179_A	0.650	1.00
245_E	249_K	0.649	1.00
326_A	329_R	0.648	1.00
299_G	391_M	0.647	1.00
73_A	76_Q	0.643	1.00
185_V	242_E	0.641	1.00
75_I	142_M	0.639	1.00
38_I	51_A	0.637	1.00
320_K	378_L	0.637	1.00
220_S	230_F	0.636	1.00
98_A	152_G	0.636	1.00
192_E	343_L	0.635	1.00
86_M	153_L	0.634	1.00
51_A	200_V	0.634	1.00
316_A	378_L	0.631	1.00
260_G	287_A	0.630	1.00
84_Q	88_D	0.630	1.00
16_P	342_L	0.627	1.00
141_N	163_A	0.627	1.00
361_Q	387_Q	0.627	1.00
274_P	310_A	0.625	1.00
24_T	349_V	0.624	1.00
278_A	321_T	0.623	1.00
24_T	28_L	0.622	1.00
339_T	342_L	0.622	1.00
391_M	411_K	0.622	1.00
158_I	162_T	0.622	1.00
142_M	401_F	0.619	1.00
203_F	401_F	0.618	1.00
357_A	388_V	0.618	1.00
188_A	239_L	0.616	1.00
230_F	343_L	0.614	1.00
75_I	143_V	0.614	1.00
86_M	96_E	0.613	1.00
277_G	314_A	0.612	1.00
227_R	373_D	0.612	1.00
329_R	380_F	0.612	1.00
177_I	186_M	0.611	1.00
242_E	246_H	0.610	1.00
238_M	348_A	0.609	1.00
139_I	142_M	0.606	1.00
363_V	386_R	0.606	1.00
264_S	279_G	0.605	1.00
78_G	82_G	0.604	1.00
102_G	177_I	0.603	1.00
80_V	84_Q	0.602	1.00
221_R	370_D	0.601	1.00
281_A	318_A	0.601	1.00
18_G	55_K	0.600	1.00
293_I	298_I	0.600	1.00
180_Y	290_D	0.598	1.00
331_L	388_V	0.595	1.00
118_N	122_L	0.594	1.00
173_H	177_I	0.592	1.00
105_I	144_A	0.592	1.00
221_R	368_N	0.591	1.00
9_T	252_A	0.590	1.00
263_M	404_T	0.589	1.00
358_L	394_T	0.588	1.00
17_V	24_T	0.587	1.00
6_V	243_E	0.586	1.00
188_A	348_A	0.585	1.00
21_V	24_T	0.585	1.00
210_S	217_Q	0.584	1.00
8_V	410_F	0.584	1.00
280_A	318_A	0.583	1.00
42_D	46_Y	0.583	1.00
100_R	282_L	0.581	1.00
163_A	401_F	0.579	1.00
288_L	407_S	0.579	1.00
6_V	178_I	0.579	1.00
302_N	354_S	0.579	1.00
333_S	364_P	0.578	1.00
331_L	381_V	0.576	1.00
98_A	154_R	0.573	1.00
154_R	279_G	0.573	1.00
74_F	143_V	0.572	1.00
208_A	401_F	0.571	1.00
71_M	146_H	0.569	1.00
178_I	246_H	0.569	1.00
303_A	334_S	0.567	1.00
84_Q	87_Q	0.566	1.00
40_H	53_L	0.566	1.00
9_T	185_V	0.565	1.00
104_A	173_H	0.564	1.00
258_L	410_F	0.562	1.00
37_L	43_T	0.562	1.00
237_G	345_A	0.562	1.00
51_A	54_V	0.560	1.00
94_T	97_N	0.560	1.00
63_I	80_V	0.560	1.00
18_G	23_S	0.560	1.00
388_V	394_T	0.559	1.00
91_L	240_V	0.558	1.00
61_D	87_Q	0.557	1.00
41_F	200_V	0.557	1.00
169_H	173_H	0.553	1.00
62_I	80_V	0.551	1.00
318_A	322_I	0.549	1.00
303_A	319_V	0.549	1.00
357_A	394_T	0.549	1.00
4_R	179_A	0.548	1.00
320_K	328_S	0.548	1.00
297_Q	392_E	0.546	1.00
85_A	89_S	0.545	1.00
43_T	46_Y	0.544	1.00
220_S	231_V	0.538	1.00
57_F	62_I	0.538	1.00
107_S	110_G	0.538	1.00
351_S	355_I	0.537	1.00
133_F	136_P	0.537	1.00
276_N	279_G	0.536	1.00
220_S	307_S	0.535	1.00
354_S	410_F	0.535	1.00
21_V	352_I	0.533	1.00
311_G	314_A	0.533	1.00
338_M	365_P	0.533	1.00
91_L	185_V	0.533	1.00
166_S	170_N	0.531	1.00
174_A	241_L	0.529	1.00
396_C	410_F	0.529	1.00
19_N	84_Q	0.528	1.00
224_D	368_N	0.527	1.00
217_Q	231_V	0.527	1.00
181_G	243_E	0.527	1.00
300_Y	357_A	0.526	1.00
172_G	263_M	0.526	1.00
177_I	180_Y	0.524	1.00
16_P	52_G	0.524	1.00
222_P	230_F	0.524	1.00
41_F	44_S	0.521	1.00
372_P	377_D	0.521	1.00
14_L	77_Y	0.521	1.00
309_P	313_K	0.520	1.00
226_E	369_L	0.520	1.00
266_D	269_H	0.518	1.00
225_K	373_D	0.517	1.00
333_S	363_V	0.516	1.00
122_L	125_G	0.516	1.00
97_N	101_I	0.516	1.00
16_P	233_G	0.516	1.00
15_S	342_L	0.514	1.00
346_A	398_S	0.513	1.00
91_L	242_E	0.512	0.99
144_A	157_S	0.512	0.99
358_L	392_E	0.511	0.99
396_C	408_L	0.511	0.99
352_I	356_L	0.510	0.99
10_G	253_K	0.510	0.99
178_I	181_G	0.509	0.99
188_A	238_M	0.509	0.99
156_P	177_I	0.508	0.99
46_Y	201_G	0.507	0.99
5_R	245_E	0.505	0.99
15_S	24_T	0.505	0.99
193_K	234_D	0.504	0.99
127_P	130_I	0.504	0.99
132_P	202_G	0.504	0.99
75_I	146_H	0.503	0.99
348_A	352_I	0.503	0.99
15_S	18_G	0.503	0.99
93_I	97_N	0.501	0.99
77_Y	193_K	0.500	0.99
274_P	278_A	0.500	0.99
201_G	205_A	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2vz8A	2	0.954	100	0.049	Contact Map
4na1A	2	0.9685	100	0.115	Contact Map
4jrmD	2	0.9952	100	0.131	Contact Map
4tktA	1	0.9661	100	0.132	Contact Map
4qyrA	2	0.9588	100	0.134	Contact Map
1e5mA	2	0.9927	100	0.134	Contact Map
2hg4A	2	0.9685	100	0.135	Contact Map
1ox0A	2	0.9879	100	0.136	Contact Map
4mz0A	2	0.9685	100	0.137	Contact Map
2gqdA	2	0.9879	100	0.139	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.012 seconds.