ETTA - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

ETTA - Energy-dependent translational throttle protein EttA

UniProt:	P0A9W3	Sequences: MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG12343
Length:	555 (430)
Sequences:	916 (546)
Seq/√Len:	26.3

ECOLI - ETTA UUP YHES GSIA YBIT
BACSU - YDIF YFMR YFMM YKPA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
223_D	245_S	10.654	1.00
273_L	277_R	5.128	1.00
346_I	352_V	4.098	1.00
332_S	376_D	3.991	1.00
132_I	137_G	3.761	1.00
103_R	124_E	3.666	1.00
328_N	343_S	3.574	1.00
289_A	292_A	3.396	1.00
100_A	103_R	3.328	1.00
402_K	410_G	3.280	1.00
163_L	171_V	3.258	1.00
526_N	529_E	3.011	1.00
366_F	497_I	2.742	0.99
231_E	247_W	2.731	0.99
106_E	110_L	2.711	0.99
291_L	295_E	2.649	0.99
97_V	101_L	2.601	0.99
429_G	435_G	2.598	0.99
103_R	107_V	2.574	0.99
276_V	294_F	2.542	0.99
326_V	344_F	2.507	0.99
287_G	292_A	2.475	0.99
331_K	376_D	2.433	0.99
440_K	444_E	2.380	0.99
97_V	100_A	2.366	0.98
136_D	139_N	2.353	0.98
156_W	163_L	2.342	0.98
280_T	283_R	2.338	0.98
327_S	379_T	2.264	0.98
230_L	239_P	2.256	0.98
527_F	530_Y	2.222	0.98
158_A	162_N	2.188	0.97
230_L	237_G	2.185	0.97
399_D	402_K	2.153	0.97
104_L	108_Y	2.150	0.97
223_D	243_N	2.137	0.97
203_R	206_H	2.098	0.97
265_R	300_T	2.086	0.97
264_A	283_R	2.074	0.96
100_A	104_L	2.041	0.96
313_I	316_G	2.037	0.96
292_A	296_E	1.992	0.96
275_W	290_R	1.977	0.95
467_L	497_I	1.954	0.95
288_K	291_L	1.947	0.95
326_V	380_I	1.945	0.95
279_G	282_G	1.943	0.95
266_R	269_I	1.942	0.95
331_K	368_M	1.916	0.94
352_V	512_L	1.896	0.94
286_K	290_R	1.870	0.94
289_A	294_F	1.870	0.94
262_E	266_R	1.860	0.93
350_A	510_H	1.828	0.93
117_D	120_K	1.827	0.93
286_K	289_A	1.819	0.93
159_K	162_N	1.768	0.92
487_L	507_I	1.761	0.91
437_D	440_K	1.760	0.91
105_D	114_P	1.760	0.91
498_S	504_L	1.752	0.91
368_M	375_P	1.738	0.91
100_A	107_V	1.732	0.91
272_E	287_G	1.725	0.91
525_G	530_Y	1.718	0.90
139_N	143_Q	1.709	0.90
98_V	102_K	1.694	0.90
104_L	111_Y	1.691	0.90
279_G	291_L	1.687	0.90
401_S	443_G	1.663	0.89
432_N	440_K	1.649	0.88
176_L	184_L	1.640	0.88
231_E	240_W	1.639	0.88
315_P	491_P	1.631	0.88
171_V	233_D	1.627	0.88
357_P	360_A	1.626	0.88
107_V	110_L	1.626	0.88
300_T	303_Q	1.625	0.88
231_E	251_K	1.607	0.87
110_L	113_D	1.590	0.87
396_D	403_T	1.585	0.86
339_I	342_L	1.575	0.86
153_L	167_E	1.564	0.86
442_V	453_L	1.554	0.85
370_S	467_L	1.518	0.84
97_V	107_V	1.508	0.83
125_Q	129_E	1.496	0.83
105_D	108_Y	1.462	0.81
182_D	487_L	1.444	0.81
353_G	508_A	1.434	0.80
192_H	197_S	1.429	0.80
110_L	114_P	1.427	0.80
255_L	259_A	1.420	0.79
340_D	518_G	1.414	0.79
477_I	480_L	1.407	0.79
429_G	434_K	1.401	0.79
278_Q	284_Q	1.396	0.78
125_Q	132_I	1.381	0.78
289_A	297_L	1.364	0.77
458_L	465_M	1.355	0.76
290_R	296_E	1.354	0.76
102_K	105_D	1.354	0.76
166_G	359_G	1.352	0.76
314_P	428_V	1.350	0.76
289_A	296_E	1.344	0.76
167_E	394_F	1.339	0.75
361_G	393_Q	1.338	0.75
106_E	109_A	1.324	0.74
360_A	518_G	1.323	0.74
516_D	519_K	1.316	0.74
140_L	144_L	1.313	0.74
297_L	300_T	1.312	0.74
284_Q	289_A	1.311	0.74
268_S	272_E	1.304	0.73
408_V	412_L	1.294	0.73
505_D	528_T	1.292	0.73
192_H	456_A	1.284	0.72
283_R	287_G	1.277	0.72
359_G	470_E	1.276	0.72
498_S	503_F	1.269	0.71
128_L	132_I	1.258	0.71
230_L	272_E	1.255	0.70
284_Q	288_K	1.254	0.70
268_S	271_K	1.247	0.70
166_G	356_G	1.242	0.70
286_K	292_A	1.241	0.69
205_L	225_V	1.241	0.69
359_G	393_Q	1.240	0.69
97_V	103_R	1.236	0.69
358_N	393_Q	1.234	0.69
219_R	248_L	1.232	0.69
526_N	530_Y	1.228	0.69
328_N	341_D	1.221	0.68
282_G	291_L	1.219	0.68
107_V	112_A	1.218	0.68
105_D	109_A	1.217	0.68
226_A	243_N	1.209	0.67
195_A	363_S	1.208	0.67
276_V	291_L	1.207	0.67
96_E	131_I	1.206	0.67
164_S	358_N	1.202	0.67
372_Q	490_F	1.195	0.66
158_A	163_L	1.195	0.66
326_V	329_L	1.194	0.66
151_L	174_C	1.193	0.66
269_I	297_L	1.190	0.66
290_R	294_F	1.184	0.66
356_G	362_K	1.181	0.66
311_L	479_T	1.172	0.65
205_L	429_G	1.172	0.65
101_L	104_L	1.170	0.65
278_Q	286_K	1.167	0.65
270_E	374_Q	1.164	0.64
449_E	464_N	1.163	0.64
127_R	341_D	1.159	0.64
219_R	500_D	1.159	0.64
284_Q	291_L	1.158	0.64
159_K	373_E	1.158	0.64
140_L	178_L	1.155	0.64
241_E	363_S	1.153	0.64
396_D	400_N	1.150	0.63
109_A	114_P	1.145	0.63
329_L	375_P	1.140	0.63
237_G	333_Y	1.138	0.63
367_R	372_Q	1.137	0.63
484_E	506_R	1.137	0.63
283_R	297_L	1.136	0.62
419_N	423_P	1.133	0.62
358_N	361_G	1.123	0.62
329_L	368_M	1.122	0.61
315_P	408_V	1.115	0.61
144_L	176_L	1.112	0.61
226_A	229_I	1.110	0.61
183_M	213_V	1.100	0.60
294_F	298_N	1.099	0.60
433_F	449_E	1.090	0.59
95_S	98_V	1.088	0.59
362_K	393_Q	1.087	0.59
199_A	235_G	1.086	0.59
292_A	295_E	1.086	0.59
99_N	103_R	1.085	0.59
422_M	426_A	1.075	0.58
164_S	359_G	1.067	0.58
197_S	429_G	1.064	0.57
403_T	410_G	1.061	0.57
272_E	293_R	1.058	0.57
430_R	455_L	1.057	0.57
129_E	198_V	1.056	0.57
290_R	295_E	1.055	0.57
366_F	467_L	1.053	0.57
406_E	421_E	1.053	0.57
98_V	101_L	1.047	0.56
356_G	359_G	1.045	0.56
375_P	380_I	1.044	0.56
96_E	100_A	1.041	0.56
202_E	224_N	1.040	0.56
387_K	464_N	1.039	0.56
213_V	309_N	1.038	0.55
403_T	406_E	1.038	0.55
166_G	361_G	1.033	0.55
182_D	219_R	1.032	0.55
97_V	105_D	1.025	0.54
327_S	467_L	1.025	0.54
151_L	512_L	1.025	0.54
283_R	290_R	1.020	0.54
96_E	102_K	1.016	0.54
102_K	107_V	1.014	0.54
365_L	514_Y	1.014	0.54
144_L	178_L	1.013	0.54
430_R	459_L	1.012	0.54
389_A	458_L	1.010	0.53
111_Y	114_P	1.008	0.53
180_K	209_E	1.008	0.53
176_L	331_K	1.003	0.53
314_P	462_G	1.002	0.53
283_R	289_A	1.002	0.53
268_S	325_E	0.999	0.53
369_I	382_L	0.988	0.52
215_I	428_V	0.985	0.52
398_M	407_E	0.984	0.51
108_Y	113_D	0.984	0.51
402_K	407_E	0.982	0.51
103_R	110_L	0.981	0.51
169_R	394_F	0.980	0.51
330_R	340_D	0.973	0.51
109_A	112_A	0.966	0.50
494_A	507_I	0.966	0.50
405_W	424_S	0.962	0.50
267_K	379_T	0.954	0.49
287_G	290_R	0.952	0.49
275_W	288_K	0.952	0.49
274_E	278_Q	0.950	0.49
395_R	451_G	0.950	0.49
166_G	393_Q	0.949	0.49
125_Q	137_G	0.949	0.49
257_Q	339_I	0.943	0.48
337_L	340_D	0.943	0.48
229_I	366_F	0.942	0.48
165_G	492_G	0.942	0.48
97_V	104_L	0.941	0.48
329_L	514_Y	0.935	0.48
358_N	362_K	0.935	0.48
152_R	467_L	0.933	0.48
119_D	122_A	0.933	0.48
104_L	113_D	0.927	0.47
218_D	447_G	0.926	0.47
100_A	111_Y	0.922	0.47
205_L	212_V	0.918	0.47
137_G	140_L	0.917	0.46
490_F	494_A	0.916	0.46
484_E	502_W	0.911	0.46
165_G	359_G	0.907	0.46
350_A	493_C	0.907	0.46
198_V	210_G	0.905	0.46
227_G	458_L	0.905	0.46
206_H	354_I	0.900	0.45
202_E	313_I	0.899	0.45
140_L	176_L	0.898	0.45
260_S	264_A	0.895	0.45
110_L	115_D	0.895	0.45
102_K	106_E	0.894	0.45
171_V	435_G	0.888	0.44
260_S	400_N	0.887	0.44
406_E	410_G	0.886	0.44
290_R	297_L	0.885	0.44
514_Y	520_V	0.884	0.44
275_W	284_Q	0.881	0.44
472_T	486_A	0.880	0.44
199_A	248_L	0.879	0.44
359_G	364_T	0.878	0.44
95_S	100_A	0.876	0.43
155_D	516_D	0.875	0.43
192_H	473_N	0.867	0.43
343_S	377_S	0.866	0.43
108_Y	114_P	0.864	0.43
99_N	104_L	0.857	0.42
141_N	341_D	0.856	0.42
95_S	99_N	0.856	0.42
107_V	114_P	0.853	0.42
102_K	109_A	0.848	0.41
432_N	437_D	0.848	0.41
269_I	273_L	0.844	0.41
139_N	497_I	0.844	0.41
359_G	362_K	0.840	0.41
277_R	281_K	0.838	0.41
288_K	295_E	0.836	0.41
292_A	297_L	0.833	0.40
228_W	433_F	0.832	0.40
139_N	355_I	0.828	0.40
121_L	423_P	0.828	0.40
205_L	313_I	0.828	0.40
243_N	246_S	0.825	0.40
106_E	112_A	0.824	0.40
407_E	410_G	0.823	0.40
160_I	169_R	0.823	0.40
404_V	412_L	0.822	0.40
192_H	429_G	0.822	0.40
293_R	297_L	0.821	0.39
174_C	512_L	0.818	0.39
132_I	136_D	0.815	0.39
283_R	286_K	0.814	0.39
109_A	113_D	0.813	0.39
324_L	346_I	0.809	0.39
275_W	286_K	0.805	0.38
166_G	364_T	0.804	0.38
250_Q	253_Q	0.802	0.38
358_N	470_E	0.801	0.38
358_N	364_T	0.798	0.38
330_R	376_D	0.797	0.38
212_V	487_L	0.797	0.38
120_K	124_E	0.796	0.38
247_W	255_L	0.793	0.37
287_G	297_L	0.792	0.37
382_L	464_N	0.792	0.37
148_A	170_R	0.792	0.37
365_L	376_D	0.789	0.37
128_L	478_E	0.789	0.37
101_L	108_Y	0.787	0.37
321_D	347_P	0.785	0.37
390_S	433_F	0.785	0.37
280_T	284_Q	0.785	0.37
106_E	434_K	0.785	0.37
314_P	317_P	0.785	0.37
266_R	270_E	0.784	0.37
107_V	115_D	0.784	0.37
240_W	404_V	0.784	0.37
96_E	101_L	0.782	0.37
393_Q	470_E	0.780	0.37
397_S	411_G	0.779	0.37
364_T	393_Q	0.778	0.36
281_K	296_E	0.777	0.36
123_A	352_V	0.776	0.36
280_T	395_R	0.775	0.36
480_L	502_W	0.775	0.36
481_R	493_C	0.774	0.36
251_K	504_L	0.772	0.36
166_G	486_A	0.771	0.36
170_R	452_R	0.769	0.36
278_Q	285_S	0.767	0.36
279_G	295_E	0.767	0.36
510_H	522_F	0.765	0.36
281_K	284_Q	0.764	0.35
198_V	345_S	0.764	0.35
407_E	457_K	0.761	0.35
433_F	437_D	0.761	0.35
118_F	121_L	0.760	0.35
370_S	390_S	0.760	0.35
354_I	467_L	0.758	0.35
398_M	404_V	0.758	0.35
361_G	470_E	0.756	0.35
332_S	369_I	0.752	0.35
286_K	291_L	0.750	0.35
280_T	292_A	0.749	0.34
228_W	241_E	0.749	0.34
293_R	296_E	0.748	0.34
279_G	288_K	0.748	0.34
319_L	322_K	0.747	0.34
112_A	115_D	0.745	0.34
359_G	497_I	0.744	0.34
151_L	475_L	0.743	0.34
276_V	292_A	0.742	0.34
131_I	511_I	0.740	0.34
212_V	274_E	0.738	0.34
427_Y	456_A	0.736	0.34
449_E	480_L	0.735	0.34
202_E	278_Q	0.735	0.34
99_N	109_A	0.732	0.33
219_R	477_I	0.731	0.33
454_H	504_L	0.730	0.33
225_V	508_A	0.730	0.33
98_V	103_R	0.730	0.33
447_G	476_D	0.729	0.33
148_A	156_W	0.729	0.33
494_A	509_T	0.728	0.33
404_V	407_E	0.728	0.33
256_A	266_R	0.724	0.33
272_E	283_R	0.724	0.33
332_S	337_L	0.720	0.33
332_S	424_S	0.717	0.32
128_L	349_G	0.717	0.32
261_Q	266_R	0.714	0.32
118_F	122_A	0.713	0.32
168_R	394_F	0.712	0.32
170_R	351_I	0.710	0.32
190_T	472_T	0.707	0.32
333_Y	367_R	0.704	0.32
455_L	477_I	0.704	0.32
355_I	451_G	0.703	0.31
359_G	492_G	0.703	0.31
161_A	455_L	0.703	0.31
433_F	453_L	0.702	0.31
357_P	515_Q	0.702	0.31
103_R	111_Y	0.701	0.31
211_T	482_A	0.699	0.31
419_N	424_S	0.699	0.31
279_G	290_R	0.695	0.31
128_L	190_T	0.694	0.31
124_E	374_Q	0.694	0.31
145_E	157_D	0.694	0.31
229_I	494_A	0.691	0.31
166_G	358_N	0.690	0.31
339_I	506_R	0.683	0.30
496_V	503_F	0.682	0.30
282_G	496_V	0.679	0.30
131_I	135_H	0.676	0.30
275_W	295_E	0.673	0.30
361_G	364_T	0.672	0.30
171_V	254_R	0.671	0.29
107_V	353_G	0.670	0.29
135_H	229_I	0.670	0.29
99_N	111_Y	0.670	0.29
136_D	405_W	0.668	0.29
168_R	350_A	0.667	0.29
358_N	499_H	0.667	0.29
361_G	497_I	0.666	0.29
472_T	496_V	0.665	0.29
128_L	137_G	0.665	0.29
406_E	409_S	0.665	0.29
367_R	467_L	0.665	0.29
391_V	441_R	0.664	0.29
501_R	505_D	0.663	0.29
342_L	521_E	0.662	0.29
275_W	294_F	0.661	0.29
334_G	376_D	0.660	0.29
138_H	342_L	0.659	0.29
219_R	502_W	0.657	0.29
148_A	153_L	0.657	0.29
185_L	213_V	0.656	0.29
99_N	102_K	0.654	0.28
325_E	328_N	0.654	0.28
203_R	363_S	0.654	0.28
243_N	346_I	0.651	0.28
96_E	99_N	0.651	0.28
371_G	374_Q	0.649	0.28
172_A	394_F	0.649	0.28
259_A	263_A	0.649	0.28
215_I	325_E	0.649	0.28
275_W	279_G	0.649	0.28
253_Q	257_Q	0.648	0.28
329_L	463_G	0.646	0.28
331_K	350_A	0.645	0.28
275_W	280_T	0.643	0.28
107_V	113_D	0.643	0.28
139_N	264_A	0.642	0.28
405_W	408_V	0.642	0.28
207_D	461_V	0.640	0.28
339_I	474_D	0.640	0.28
164_S	361_G	0.640	0.28
143_Q	494_A	0.640	0.28
96_E	103_R	0.638	0.27
193_L	366_F	0.638	0.27
287_G	294_F	0.637	0.27
405_W	438_Q	0.636	0.27
218_D	501_R	0.636	0.27
163_L	169_R	0.635	0.27
288_K	303_Q	0.635	0.27
515_Q	521_E	0.635	0.27
391_V	483_L	0.634	0.27
274_E	277_R	0.633	0.27
124_E	127_R	0.633	0.27
98_V	105_D	0.629	0.27
524_E	530_Y	0.627	0.27
400_N	404_V	0.627	0.27
100_A	105_D	0.626	0.27
407_E	411_G	0.624	0.27
359_G	499_H	0.623	0.27
195_A	198_V	0.622	0.27
273_L	291_L	0.622	0.27
262_E	265_R	0.621	0.26
232_L	299_S	0.618	0.26
275_W	289_A	0.617	0.26
99_N	106_E	0.616	0.26
117_D	121_L	0.616	0.26
164_S	393_Q	0.616	0.26
215_I	453_L	0.616	0.26
166_G	362_K	0.615	0.26
190_T	503_F	0.615	0.26
188_E	191_N	0.614	0.26
384_E	487_L	0.613	0.26
144_L	170_R	0.613	0.26
124_E	373_E	0.612	0.26
363_S	367_R	0.611	0.26
111_Y	115_D	0.611	0.26
333_Y	497_I	0.611	0.26
371_G	494_A	0.610	0.26
348_K	383_G	0.610	0.26
444_E	464_N	0.608	0.26
140_L	504_L	0.608	0.26
351_I	493_C	0.606	0.26
246_S	249_E	0.606	0.26
230_L	365_L	0.605	0.26
404_V	410_G	0.605	0.26
290_R	300_T	0.603	0.25
295_E	450_R	0.602	0.25
474_D	508_A	0.602	0.25
162_N	171_V	0.602	0.25
278_Q	287_G	0.602	0.25
356_G	393_Q	0.600	0.25
280_T	291_L	0.599	0.25
279_G	283_R	0.598	0.25
108_Y	111_Y	0.598	0.25
130_E	409_S	0.597	0.25
166_G	472_T	0.597	0.25
157_D	328_N	0.597	0.25
97_V	102_K	0.597	0.25
291_L	300_T	0.596	0.25
277_R	288_K	0.595	0.25
388_L	465_M	0.595	0.25
431_F	456_A	0.594	0.25
104_L	107_V	0.594	0.25
106_E	115_D	0.594	0.25
383_G	435_G	0.592	0.25
339_I	370_S	0.591	0.25
167_E	170_R	0.591	0.25
293_R	350_A	0.590	0.25
142_V	271_K	0.588	0.25
275_W	291_L	0.586	0.24
358_N	497_I	0.585	0.24
219_R	501_R	0.584	0.24
163_L	167_E	0.583	0.24
238_I	254_R	0.582	0.24
127_R	273_L	0.582	0.24
293_R	523_F	0.582	0.24
126_G	390_S	0.580	0.24
228_W	453_L	0.579	0.24
324_L	374_Q	0.576	0.24
109_A	335_D	0.575	0.24
152_R	367_R	0.575	0.24
324_L	402_K	0.575	0.24
290_R	293_R	0.571	0.24
293_R	298_N	0.571	0.24
436_V	450_R	0.571	0.24
95_S	102_K	0.570	0.24
195_A	391_V	0.569	0.24
297_L	390_S	0.569	0.24
423_P	426_A	0.569	0.24
282_G	286_K	0.569	0.24
429_G	467_L	0.568	0.23
389_A	463_G	0.568	0.23
395_R	454_H	0.566	0.23
321_D	432_N	0.566	0.23
153_L	398_M	0.566	0.23
356_G	361_G	0.566	0.23
169_R	172_A	0.565	0.23
326_V	369_I	0.565	0.23
259_A	262_E	0.563	0.23
258_E	263_A	0.562	0.23
286_K	294_F	0.561	0.23
269_I	277_R	0.561	0.23
170_R	463_G	0.560	0.23
261_Q	265_R	0.560	0.23
221_F	243_N	0.559	0.23
212_V	429_G	0.558	0.23
266_R	406_E	0.557	0.23
393_Q	499_H	0.556	0.23
269_I	299_S	0.554	0.23
146_R	389_A	0.554	0.23
185_L	245_S	0.553	0.23
496_V	512_L	0.553	0.23
347_P	468_L	0.552	0.23
271_K	275_W	0.551	0.23
518_G	524_E	0.548	0.22
431_F	504_L	0.548	0.22
159_K	490_F	0.546	0.22
148_A	181_P	0.546	0.22
127_R	528_T	0.545	0.22
213_V	222_L	0.545	0.22
332_S	338_L	0.544	0.22
389_A	513_D	0.544	0.22
147_A	179_E	0.544	0.22
286_K	296_E	0.541	0.22
168_R	198_V	0.539	0.22
343_S	381_T	0.537	0.22
164_S	499_H	0.537	0.22
273_L	295_E	0.536	0.22
316_G	431_F	0.536	0.22
153_L	169_R	0.535	0.22
138_H	233_D	0.534	0.22
364_T	367_R	0.534	0.22
126_G	411_G	0.532	0.22
370_S	518_G	0.532	0.22
364_T	497_I	0.531	0.22
173_L	200_W	0.531	0.22
276_V	289_A	0.530	0.22
279_G	284_Q	0.529	0.21
245_S	511_I	0.528	0.21
262_E	302_Y	0.528	0.21
129_E	282_G	0.528	0.21
470_E	492_G	0.528	0.21
166_G	492_G	0.528	0.21
405_W	413_D	0.527	0.21
165_G	470_E	0.527	0.21
492_G	497_I	0.526	0.21
167_E	398_M	0.526	0.21
320_G	383_G	0.526	0.21
307_E	311_L	0.526	0.21
378_G	452_R	0.525	0.21
134_A	227_G	0.525	0.21
213_V	300_T	0.525	0.21
147_A	309_N	0.525	0.21
315_P	428_V	0.525	0.21
301_E	311_L	0.524	0.21
276_V	383_G	0.524	0.21
389_A	466_L	0.523	0.21
152_R	163_L	0.523	0.21
204_F	210_G	0.523	0.21
288_K	301_E	0.522	0.21
183_M	265_R	0.520	0.21
470_E	483_L	0.520	0.21
283_R	295_E	0.520	0.21
443_G	495_M	0.519	0.21
172_A	443_G	0.519	0.21
208_F	490_F	0.519	0.21
433_F	458_L	0.518	0.21
295_E	298_N	0.517	0.21
511_I	515_Q	0.517	0.21
334_G	337_L	0.517	0.21
405_W	409_S	0.517	0.21
404_V	442_V	0.516	0.21
163_L	423_P	0.516	0.21
477_I	503_F	0.516	0.21
287_G	431_F	0.516	0.21
366_F	458_L	0.516	0.21
162_N	363_S	0.516	0.21
361_G	499_H	0.515	0.21
356_G	486_A	0.515	0.21
95_S	109_A	0.514	0.21
165_G	192_H	0.513	0.21
107_V	121_L	0.513	0.21
232_L	461_V	0.512	0.21
221_F	225_V	0.511	0.21
192_H	210_G	0.511	0.21
393_Q	483_L	0.510	0.21
214_A	420_T	0.508	0.20
346_I	461_V	0.508	0.20
433_F	440_K	0.506	0.20
102_K	127_R	0.505	0.20
103_R	108_Y	0.505	0.20
122_A	135_H	0.504	0.20
270_E	421_E	0.504	0.20
291_L	367_R	0.503	0.20
323_V	466_L	0.503	0.20
429_G	458_L	0.502	0.20
286_K	293_R	0.501	0.20
151_L	168_R	0.500	0.20

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4finA	2	0.9748	100	0.471	Contact Map
2iw3A	2	0.7802	100	0.556	Contact Map
3bk7A	1	0.8811	100	0.6	Contact Map
1yqtA	1	0.8667	100	0.608	Contact Map
3ozxA	1	0.8613	100	0.613	Contact Map
4q9hA	1	0.8937	100	0.622	Contact Map
3j16B	1	0.8847	100	0.623	Contact Map
4f4cA	1	0.8486	100	0.634	Contact Map
3ux8A	2	0.7495	100	0.647	Contact Map
2vf7A	2	0.8667	100	0.653	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0123 seconds.