GREMLIN Database
DEAD - ATP-dependent RNA helicase DeaD
UniProt: P0A9P6 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10215
Length: 629 (533)
Sequences: 2665 (2101)
Seq/√Len: 91.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
61_S94_M4.9171.00
65_L68_L3.3131.00
252_V261_V2.8651.00
131_G136_L2.8621.00
94_M128_I2.6431.00
78_L150_L2.5711.00
32_I48_G2.5541.00
503_H506_G2.5101.00
447_R450_R2.5011.00
81_A90_V2.4711.00
23_D100_H2.4641.00
509_A513_D2.4481.00
431_M438_L2.4201.00
250_I298_I2.3611.00
252_V258_T2.3381.00
426_A433_Q2.3171.00
450_R454_D2.2841.00
39_H208_V2.2481.00
497_D500_E2.1761.00
420_D423_T2.1551.00
305_A309_L2.1451.00
519_I522_I2.1201.00
546_T549_R2.0971.00
529_S534_P2.0931.00
558_Q562_D2.0891.00
419_L430_K2.0741.00
232_K321_D2.0131.00
492_E496_D2.0011.00
494_G497_D1.9901.00
490_R494_G1.9871.00
500_E505_V1.9801.00
535_K538_P1.9671.00
425_A429_L1.9661.00
504_I508_I1.9461.00
539_G542_L1.9411.00
563_A566_H1.9251.00
427_A430_K1.9071.00
509_A512_G1.9061.00
424_L427_A1.9021.00
511_E514_I1.8951.00
516_S519_I1.8931.00
236_L318_V1.8561.00
535_K539_G1.8551.00
406_L409_K1.8531.00
558_Q566_H1.8451.00
514_I517_R1.8411.00
444_A452_F1.8311.00
551_L555_M1.8181.00
521_N525_F1.8131.00
558_Q563_A1.8121.00
504_I507_A1.8031.00
543_Q550_I1.8011.00
206_Q215_T1.7831.00
533_L537_M1.7791.00
500_E504_I1.7771.00
510_N514_I1.7751.00
479_E482_D1.7701.00
453_R456_D1.7551.00
158_A185_L1.7471.00
537_M541_V1.7471.00
451_E454_D1.7411.00
433_Q438_L1.7291.00
559_L563_A1.7291.00
543_Q547_R1.7251.00
535_K544_H1.7141.00
558_Q561_G1.6911.00
526_A531_I1.6821.00
544_H552_N1.6791.00
500_E503_H1.6681.00
549_R554_P1.6661.00
408_S411_Q1.6651.00
517_R520_G1.6651.00
548_T553_K1.6631.00
495_R499_V1.6301.00
536_G539_G1.6281.00
534_P537_M1.6281.00
237_V268_N1.6241.00
40_L184_A1.6201.00
442_P445_P1.6181.00
453_R457_D1.6121.00
505_V508_I1.6091.00
549_R552_N1.6091.00
504_I510_N1.6021.00
478_R481_R1.6011.00
539_G545_F1.5921.00
499_V504_I1.5891.00
544_H548_T1.5891.00
445_P449_K1.5811.00
495_R500_E1.5761.00
425_A430_K1.5751.00
499_V503_H1.5741.00
430_K438_L1.5731.00
496_D499_V1.5711.00
497_D501_V1.5701.00
270_Y298_I1.5691.00
511_E519_I1.5651.00
530_T534_P1.5651.00
452_F455_R1.5611.00
430_K434_G1.5551.00
455_R458_R1.5541.00
529_S533_L1.5531.00
64_L68_L1.5481.00
541_V545_F1.5421.00
430_K436_R1.5381.00
454_D458_R1.5371.00
481_R485_D1.5271.00
427_A431_M1.5171.00
405_A411_Q1.5151.00
550_I553_K1.5071.00
496_D501_V1.5071.00
560_L564_Q1.5051.00
431_M434_G1.5031.00
526_A530_T1.4981.00
444_A447_R1.4951.00
403_Y409_K1.4921.00
262_A272_S1.4921.00
428_L433_Q1.4781.00
555_M559_L1.4751.00
554_P559_L1.4711.00
477_R480_R1.4601.00
120_R123_R1.4591.00
431_M436_R1.4550.99
429_L439_I1.4470.99
552_N558_Q1.4460.99
513_D517_R1.4450.99
533_L538_P1.4400.99
217_R222_Q1.4290.99
405_A408_S1.4200.99
533_L543_Q1.4180.99
541_V548_T1.4180.99
404_R408_S1.4130.99
563_A567_T1.4100.99
64_L67_N1.4090.99
496_D504_I1.4070.99
429_L434_G1.4060.99
518_Y522_I1.4020.99
532_E535_K1.4020.99
444_A448_P1.3890.99
502_R506_G1.3890.99
430_K433_Q1.3880.99
502_R505_V1.3880.99
550_I554_P1.3790.99
392_Q395_L1.3770.99
451_E455_R1.3690.99
446_M449_K1.3680.99
484_G487_Q1.3670.99
368_I373_L1.3660.99
544_H550_I1.3600.99
532_E536_G1.3560.99
454_D457_D1.3550.99
503_H509_A1.3480.99
252_V300_I1.3440.99
511_E515_S1.3330.99
507_A512_G1.3280.99
427_A433_Q1.3240.99
446_M450_R1.3240.99
537_M547_R1.3230.99
450_R455_R1.3210.99
343_G347_L1.3130.99
450_R453_R1.3120.99
515_S519_I1.3100.99
322_I347_L1.3090.99
533_L539_G1.3080.99
479_E483_V1.3060.99
557_M560_L1.3050.99
417_E421_L1.3020.99
429_L437_T1.3000.99
442_P446_M1.2990.99
502_R510_N1.2930.99
518_Y521_N1.2920.99
494_G504_I1.2810.99
545_F549_R1.2790.99
511_E517_R1.2740.99
559_L566_H1.2680.99
94_M130_V1.2660.99
559_L565_P1.2640.99
564_Q567_T1.2610.99
289_E293_D1.2610.99
501_V505_V1.2540.98
556_N559_L1.2530.98
456_D461_R1.2530.98
545_F548_T1.2450.98
23_D99_K1.2430.98
399_D403_Y1.2380.98
477_R482_D1.2380.98
421_L425_A1.2370.98
544_H547_R1.2280.98
449_K452_F1.2280.98
534_P544_H1.2280.98
550_I557_M1.2260.98
371_V374_P1.2240.98
558_Q567_T1.2200.98
436_R439_I1.2190.98
527_S530_T1.2160.98
417_E432_A1.2130.98
543_Q552_N1.2090.98
552_N564_Q1.2090.98
445_P451_E1.2070.98
433_Q437_T1.2050.98
557_M565_P1.2020.98
504_I511_E1.1990.98
532_E539_G1.1950.98
557_M566_H1.1930.98
419_L423_T1.1910.98
535_K541_V1.1900.98
480_R484_G1.1900.98
552_N566_H1.1870.98
558_Q565_P1.1850.98
44_R206_Q1.1830.98
526_A529_S1.1790.98
431_M435_E1.1790.98
159_D307_R1.1770.98
417_E423_T1.1760.98
503_H508_I1.1740.98
512_G515_S1.1710.98
506_G510_N1.1710.98
483_V487_Q1.1690.98
255_K278_D1.1670.98
515_S518_Y1.1670.98
547_R557_M1.1630.98
560_L565_P1.1580.97
534_P538_P1.1570.97
513_D519_I1.1540.97
535_K549_R1.1520.97
418_E421_L1.1510.97
507_A511_E1.1500.97
547_R551_L1.1480.97
425_A428_L1.1440.97
514_I518_Y1.1420.97
433_Q436_R1.1410.97
482_D486_M1.1400.97
432_A436_R1.1400.97
539_G543_Q1.1370.97
451_E461_R1.1340.97
428_L437_T1.1330.97
435_E439_I1.1330.97
538_P541_V1.1300.97
505_V509_A1.1290.97
63_P68_L1.1270.97
507_A510_N1.1260.97
432_A435_E1.1220.97
423_T426_A1.1220.97
557_M562_D1.1210.97
499_V505_V1.1200.97
420_D424_L1.1140.97
406_L411_Q1.1130.97
548_T551_L1.1120.97
202_M205_P1.1110.97
533_L536_G1.1090.97
506_G509_A1.1070.97
405_A409_K1.1060.97
425_A432_A1.1040.97
536_G540_E1.0950.96
499_V510_N1.0920.96
549_R557_M1.0910.96
526_A548_T1.0910.96
496_D500_E1.0900.96
510_N513_D1.0880.96
560_L563_A1.0840.96
407_L410_I1.0840.96
560_L566_H1.0830.96
424_L428_L1.0800.96
477_R481_R1.0780.96
546_T553_K1.0730.96
499_V502_R1.0690.96
265_L300_I1.0640.96
424_L434_G1.0610.96
436_R440_V1.0600.96
513_D516_S1.0570.96
401_D405_A1.0560.96
559_L562_D1.0560.96
510_N516_S1.0510.95
557_M564_Q1.0500.95
542_L546_T1.0500.95
564_Q568_G1.0480.95
428_L438_L1.0450.95
434_G437_T1.0440.95
535_K546_T1.0440.95
417_E428_L1.0430.95
381_K386_K1.0400.95
423_T432_A1.0380.95
427_A434_G1.0380.95
482_D487_Q1.0370.95
413_T424_L1.0370.95
167_I171_E1.0370.95
554_P558_Q1.0360.95
403_Y410_I1.0350.95
444_A450_R1.0310.95
553_K558_Q1.0290.95
426_A431_M1.0280.95
442_P448_P1.0260.95
388_A395_L1.0260.95
541_V553_K1.0250.95
532_E543_Q1.0250.95
368_I371_V1.0250.95
496_D503_H1.0220.95
512_G517_R1.0200.95
545_F555_M1.0200.95
529_S536_G1.0180.95
495_R503_H1.0180.95
491_I507_A1.0160.95
540_E552_N1.0150.95
15_A19_E1.0120.94
546_T550_I1.0090.94
534_P540_E1.0080.94
402_Q405_A1.0060.94
562_D567_T1.0030.94
533_L540_E1.0030.94
19_E100_H1.0020.94
562_D565_P1.0020.94
555_M558_Q1.0020.94
491_I494_G1.0010.94
384_L387_F0.9930.94
534_P556_N0.9920.94
555_M567_T0.9920.94
539_G544_H0.9870.94
381_K390_K0.9870.94
17_I66_Q0.9860.94
239_F346_L0.9860.94
417_E420_D0.9850.94
548_T557_M0.9830.94
503_H507_A0.9820.94
430_K439_I0.9810.93
355_R360_I0.9800.93
413_T429_L0.9790.93
430_K437_T0.9770.93
413_T438_L0.9770.93
550_I559_L0.9760.93
427_A436_R0.9710.93
425_A433_Q0.9700.93
360_I367_T0.9690.93
544_H558_Q0.9690.93
421_L433_Q0.9670.93
432_A441_P0.9670.93
419_L432_A0.9650.93
519_I523_K0.9650.93
422_E426_A0.9650.93
481_R484_G0.9630.93
498_G513_D0.9630.93
421_L424_L0.9610.93
537_M540_E0.9590.93
544_H551_L0.9570.93
529_S552_N0.9520.92
448_P451_E0.9520.92
555_M560_L0.9510.92
425_A434_G0.9470.92
548_T555_M0.9470.92
382_R386_K0.9460.92
429_L436_R0.9430.92
498_G502_R0.9420.92
501_V506_G0.9420.92
63_P67_N0.9390.92
553_K556_N0.9370.92
517_R522_I0.9350.92
159_D331_H0.9340.92
343_G349_V0.9340.92
508_I512_G0.9330.92
261_V300_I0.9320.92
535_K554_P0.9320.92
531_I550_I0.9300.92
446_M451_E0.9240.91
543_Q553_K0.9220.91
452_F456_D0.9220.91
506_G511_E0.9200.91
519_I525_F0.9190.91
494_G501_V0.9180.91
501_V507_A0.9160.91
401_D404_R0.9130.91
555_M565_P0.9110.91
538_P551_L0.9110.91
492_E497_D0.9090.91
444_A449_K0.9080.91
449_K457_D0.9060.90
542_L559_L0.9060.90
449_K455_R0.9050.90
119_L123_R0.9040.90
426_A432_A0.9020.90
508_I514_I0.9000.90
534_P568_G0.9000.90
428_L431_M0.9000.90
563_A568_G0.8960.90
326_S363_T0.8900.90
536_G545_F0.8890.90
482_D485_D0.8870.89
420_D430_K0.8870.89
532_E541_V0.8860.89
76_Q127_Q0.8860.89
529_S537_M0.8860.89
540_E544_H0.8780.89
527_S533_L0.8770.89
557_M563_A0.8770.89
552_N555_M0.8760.89
498_G501_V0.8750.89
561_G565_P0.8750.89
539_G547_R0.8730.89
510_N515_S0.8670.88
562_D566_H0.8660.88
217_R220_I0.8660.88
542_L554_P0.8610.88
490_R500_E0.8610.88
358_R361_E0.8600.88
532_E565_P0.8590.88
544_H553_K0.8590.88
447_R451_E0.8560.88
478_R482_D0.8540.88
538_P544_H0.8540.88
424_L432_A0.8530.88
548_T566_H0.8520.88
356_L361_E0.8500.87
521_N524_L0.8490.87
222_Q329_Y0.8480.87
552_N556_N0.8460.87
544_H549_R0.8460.87
498_G510_N0.8440.87
512_G516_S0.8420.87
540_E543_Q0.8420.87
387_F391_V0.8410.87
447_R455_R0.8390.87
550_I555_M0.8390.87
545_F565_P0.8390.87
479_E485_D0.8370.87
510_N518_Y0.8370.87
516_S524_L0.8370.87
424_L431_M0.8360.87
499_V506_G0.8360.87
491_I501_V0.8360.87
532_E540_E0.8350.86
558_Q568_G0.8330.86
534_P543_Q0.8320.86
476_P480_R0.8320.86
530_T550_I0.8300.86
421_L430_K0.8290.86
422_E437_T0.8280.86
535_K543_Q0.8280.86
495_R504_I0.8280.86
419_L429_L0.8280.86
500_E512_G0.8260.86
423_T439_I0.8240.86
402_Q409_K0.8230.86
542_L558_Q0.8230.86
418_E423_T0.8210.86
259_L274_A0.8190.85
555_M561_G0.8160.85
431_M437_T0.8150.85
535_K545_F0.8140.85
445_P454_D0.8110.85
541_V544_H0.8110.85
539_G563_A0.8100.85
552_N568_G0.8100.85
544_H556_N0.8090.85
516_S522_I0.8090.85
449_K453_R0.8080.85
319_N333_I0.8080.85
518_Y523_K0.8050.84
547_R567_T0.8040.84
546_T554_P0.8030.84
424_L438_L0.8010.84
408_S412_P0.8010.84
529_S542_L0.8000.84
98_S104_V0.7990.84
541_V557_M0.7960.84
352_R355_R0.7960.84
529_S543_Q0.7950.84
537_M553_K0.7940.84
486_M490_R0.7940.84
539_G549_R0.7940.84
430_K435_E0.7930.83
404_R409_K0.7930.83
541_V549_R0.7920.83
512_G536_G0.7920.83
450_R456_D0.7900.83
432_A437_T0.7900.83
481_R486_M0.7890.83
552_N557_M0.7860.83
449_K454_D0.7860.83
495_R515_S0.7850.83
542_L548_T0.7810.83
406_L410_I0.7810.83
497_D504_I0.7800.82
478_R484_G0.7760.82
452_F457_D0.7750.82
530_T535_K0.7750.82
273_A290_R0.7720.82
494_G499_V0.7700.82
416_G428_L0.7690.82
536_G552_N0.7680.82
556_N566_H0.7650.81
547_R550_I0.7630.81
493_V500_E0.7620.81
549_R553_K0.7620.81
544_H557_M0.7610.81
504_I516_S0.7600.81
551_L558_Q0.7600.81
507_A516_S0.7600.81
528_H531_I0.7590.81
427_A438_L0.7590.81
425_A435_E0.7580.81
429_L435_E0.7560.80
555_M562_D0.7560.80
536_G558_Q0.7550.80
423_T430_K0.7540.80
445_P453_R0.7540.80
525_F534_P0.7530.80
38_P309_L0.7520.80
525_F528_H0.7510.80
546_T557_M0.7500.80
236_L250_I0.7490.80
556_N560_L0.7490.80
538_P546_T0.7470.80
384_L388_A0.7430.79
534_P548_T0.7360.79
424_L429_L0.7340.78
492_E499_V0.7330.78
546_T562_D0.7320.78
559_L564_Q0.7320.78
548_T559_L0.7320.78
395_L403_Y0.7310.78
428_L432_A0.7290.78
549_R555_M0.7290.78
80_L131_G0.7290.78
387_F390_K0.7270.78
421_L426_A0.7260.78
385_E390_K0.7250.78
506_G516_S0.7250.78
448_P458_R0.7250.78
538_P562_D0.7230.77
316_L346_L0.7220.77
434_G438_L0.7210.77
379_L386_K0.7210.77
533_L541_V0.7210.77
498_G507_A0.7200.77
307_R331_H0.7200.77
381_K385_E0.7190.77
553_K564_Q0.7190.77
545_F557_M0.7180.77
552_N563_A0.7170.77
403_Y411_Q0.7170.77
507_A513_D0.7170.77
61_S93_A0.7120.76
514_I522_I0.7120.76
432_A438_L0.7110.76
552_N567_T0.7110.76
499_V511_E0.7110.76
530_T541_V0.7100.76
492_E495_R0.7090.76
496_D514_I0.7080.76
333_I345_A0.7080.76
561_G568_G0.7060.76
494_G502_R0.7050.76
118_Q121_A0.7050.76
420_D432_A0.7040.76
500_E510_N0.7030.75
403_Y408_S0.7020.75
43_G182_Q0.7000.75
357_L361_E0.7000.75
93_A97_F0.6990.75
547_R561_G0.6990.75
420_D436_R0.6980.75
529_S535_K0.6940.75
525_F529_S0.6940.75
553_K557_M0.6920.74
286_Q290_R0.6920.74
428_L434_G0.6890.74
504_I512_G0.6850.74
492_E506_G0.6840.73
504_I509_A0.6830.73
554_P563_A0.6830.73
445_P450_R0.6820.73
520_G523_K0.6800.73
403_Y406_L0.6800.73
522_I525_F0.6790.73
418_E427_A0.6780.73
543_Q560_L0.6770.73
36_C46_V0.6770.73
424_L435_E0.6770.73
527_S539_G0.6760.73
530_T537_M0.6760.73
419_L435_E0.6750.72
499_V508_I0.6740.72
20_A100_H0.6730.72
514_I519_I0.6720.72
561_G564_Q0.6710.72
432_A439_I0.6700.72
529_S539_G0.6680.72
369_P372_E0.6670.72
522_I528_H0.6670.72
537_M542_L0.6670.72
558_Q564_Q0.6660.71
425_A431_M0.6660.71
536_G546_T0.6650.71
476_P479_E0.6640.71
208_V214_V0.6640.71
547_R554_P0.6630.71
547_R568_G0.6610.71
545_F563_A0.6610.71
85_E89_Q0.6590.71
216_T222_Q0.6580.71
495_R506_G0.6570.70
523_K527_S0.6570.70
536_G544_H0.6550.70
421_L431_M0.6550.70
210_I214_V0.6540.70
496_D510_N0.6540.70
391_V396_E0.6530.70
553_K567_T0.6530.70
514_I521_N0.6520.70
424_L433_Q0.6520.70
399_D411_Q0.6520.70
422_E438_L0.6520.70
419_L422_E0.6500.70
500_E508_I0.6490.70
424_L430_K0.6490.70
552_N559_L0.6480.69
394_Q398_S0.6480.69
547_R552_N0.6470.69
557_M561_G0.6450.69
499_V507_A0.6440.69
500_E507_A0.6440.69
444_A454_D0.6420.69
361_E364_M0.6400.68
503_H516_S0.6400.68
556_N562_D0.6400.68
493_V496_D0.6390.68
447_R452_F0.6380.68
527_S537_M0.6380.68
545_F554_P0.6350.68
529_S550_I0.6350.68
547_R559_L0.6340.68
536_G547_R0.6330.68
532_E538_P0.6320.67
429_L432_A0.6300.67
222_Q333_I0.6280.67
404_R410_I0.6280.67
479_E484_G0.6270.67
555_M563_A0.6260.67
495_R507_A0.6250.67
483_V486_M0.6240.67
207_E210_I0.6210.66
417_E444_A0.6200.66
94_M106_V0.6180.66
540_E545_F0.6180.66
419_L438_L0.6170.66
385_E389_A0.6170.66
178_P181_H0.6160.66
494_G500_E0.6160.66
552_N565_P0.6150.65
544_H554_P0.6150.65
134_G160_E0.6130.65
497_D502_R0.6120.65
532_E537_M0.6110.65
381_K384_L0.6100.65
543_Q549_R0.6100.65
413_T433_Q0.6090.65
126_P129_V0.6090.65
429_L438_L0.6090.65
421_L427_A0.6070.64
381_K398_S0.6070.64
539_G561_G0.6050.64
480_R483_V0.6050.64
505_V510_N0.6050.64
190_M337_G0.6040.64
387_F395_L0.6040.64
543_Q565_P0.6040.64
541_V550_I0.6040.64
538_P558_Q0.6040.64
21_L58_A0.6030.64
209_R212_S0.6020.64
554_P557_M0.6020.64
537_M545_F0.6020.64
83_T307_R0.6020.64
536_G551_L0.6010.64
413_T430_K0.6000.63
233_N261_V0.6000.63
356_L360_I0.6000.63
536_G542_L0.5990.63
449_K456_D0.5990.63
381_K389_A0.5990.63
540_E557_M0.5960.63
553_K560_L0.5960.63
83_T134_G0.5950.63
540_E546_T0.5940.63
84_R134_G0.5930.63
507_A515_S0.5920.62
562_D568_G0.5920.62
505_V511_E0.5910.62
247_A315_S0.5900.62
451_E458_R0.5890.62
85_E331_H0.5880.62
491_I504_I0.5880.62
505_V515_S0.5860.62
552_N561_G0.5860.62
394_Q397_S0.5850.62
551_L562_D0.5850.62
407_L412_P0.5830.61
445_P448_P0.5830.61
531_I534_P0.5830.61
448_P452_F0.5830.61
477_R483_V0.5830.61
423_T428_L0.5820.61
369_P374_P0.5800.61
560_L568_G0.5790.61
556_N564_Q0.5790.61
554_P565_P0.5780.61
416_G437_T0.5780.61
413_T416_G0.5770.61
548_T554_P0.5760.60
535_K548_T0.5750.60
335_R338_R0.5750.60
538_P556_N0.5740.60
413_T439_I0.5740.60
458_R461_R0.5730.60
484_G497_D0.5730.60
493_V502_R0.5720.60
402_Q408_S0.5720.60
435_E441_P0.5710.60
524_L528_H0.5690.59
537_M544_H0.5680.59
543_Q558_Q0.5680.59
420_D433_Q0.5670.59
509_A518_Y0.5650.59
551_L567_T0.5650.59
534_P541_V0.5640.59
420_D439_I0.5620.59
220_I337_G0.5600.58
533_L544_H0.5600.58
425_A439_I0.5590.58
137_L256_N0.5580.58
520_G527_S0.5570.58
536_G548_T0.5560.58
529_S549_R0.5550.58
457_D461_R0.5520.57
551_L554_P0.5520.57
503_H510_N0.5520.57
540_E551_L0.5510.57
517_R526_A0.5490.57
513_D520_G0.5490.57
442_P447_R0.5480.57
499_V516_S0.5470.56
446_M454_D0.5460.56
528_H548_T0.5460.56
534_P542_L0.5460.56
543_Q546_T0.5460.56
493_V499_V0.5450.56
417_E436_R0.5440.56
511_E528_H0.5440.56
526_A533_L0.5430.56
519_I529_S0.5430.56
448_P455_R0.5430.56
503_H512_G0.5420.56
396_E400_L0.5410.56
415_E422_E0.5410.56
434_G439_I0.5390.55
450_R478_R0.5380.55
395_L398_S0.5380.55
549_R558_Q0.5370.55
542_L557_M0.5350.55
518_Y528_H0.5350.55
395_L409_K0.5350.55
506_G515_S0.5350.55
520_G524_L0.5350.55
413_T418_E0.5340.55
398_S401_D0.5340.55
420_D426_A0.5330.55
19_E23_D0.5320.54
88_V285_E0.5300.54
405_A410_I0.5290.54
45_D205_P0.5290.54
526_A541_V0.5290.54
134_G307_R0.5250.53
541_V551_L0.5230.53
428_L439_I0.5220.53
541_V556_N0.5220.53
534_P545_F0.5220.53
545_F551_L0.5210.53
539_G562_D0.5200.53
422_E427_A0.5190.53
382_R390_K0.5190.53
553_K565_P0.5180.52
533_L552_N0.5170.52
343_G350_E0.5140.52
421_L439_I0.5130.52
391_V398_S0.5130.52
84_R87_A0.5120.52
415_E419_L0.5120.52
498_G504_I0.5110.52
491_I497_D0.5110.52
554_P568_G0.5100.51
535_K540_E0.5100.51
89_Q334_G0.5090.51
531_I542_L0.5090.51
554_P564_Q0.5090.51
517_R521_N0.5070.51
548_T565_P0.5040.51
419_L425_A0.5040.51
419_L427_A0.5030.50
535_K565_P0.5030.50
456_D462_D0.5030.50
137_L141_K0.5020.50
534_P539_G0.5020.50
557_M567_T0.5000.50
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4pxaA 1 0.6025 100 0.361 Contact Map
4nhoA 1 0.593 100 0.374 Contact Map
2db3A 1 0.5946 100 0.375 Contact Map
4ljyA 1 0.6232 100 0.378 Contact Map
4d25A 1 0.5962 100 0.387 Contact Map
3fmpB 1 0.3307 100 0.39 Contact Map
4c9bA 1 0.5978 100 0.394 Contact Map
3sqwA 1 0.7329 100 0.396 Contact Map
3i5xA 1 0.7345 100 0.402 Contact Map
3eiqA 1 0.5676 100 0.402 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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