RNG - ECOLI - GREMLIN Contacts

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RNG - Ribonuclease G

UniProt:	P0A9J0	Sequences: MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11299
Length:	489 (463)
Sequences:	2281 (1259)
Seq/√Len:	58.5

ECOLI - RNG RNE

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
282_R	295_D	5.768	1.00
230_R	258_E	5.008	1.00
66_A	119_L	4.947	1.00
317_D	356_H	4.626	1.00
132_F	166_G	4.260	1.00
4_E	230_R	4.206	1.00
364_L	386_V	4.065	1.00
150_E	153_R	4.050	1.00
288_S	326_E	3.859	1.00
329_Q	363_S	3.816	1.00
8_N	234_D	3.541	1.00
405_C	408_C	3.334	1.00
346_I	388_M	3.173	1.00
43_K	102_D	3.123	1.00
321_F	356_H	3.007	1.00
356_H	359_R	2.930	1.00
6_L	266_I	2.789	1.00
111_P	117_A	2.763	1.00
303_V	331_I	2.751	1.00
301_T	340_L	2.732	1.00
449_A	473_V	2.729	1.00
160_E	179_E	2.712	1.00
233_V	242_L	2.704	1.00
279_A	397_I	2.677	1.00
214_A	241_A	2.644	1.00
335_L	340_L	2.635	1.00
47_S	59_D	2.589	1.00
307_T	320_I	2.552	1.00
415_K	423_E	2.536	1.00
321_F	325_I	2.534	1.00
48_R	65_A	2.500	1.00
291_Y	308_G	2.446	1.00
158_V	170_I	2.424	1.00
361_L	386_V	2.320	1.00
368_L	375_T	2.312	1.00
236_R	259_H	2.274	1.00
150_E	176_G	2.268	1.00
405_C	412_G	2.253	1.00
239_Y	243_L	2.246	1.00
203_P	207_Y	2.235	1.00
177_V	181_E	2.224	1.00
246_T	257_L	2.216	1.00
104_M	209_L	2.202	1.00
44_G	58_V	2.198	1.00
224_A	231_I	2.191	1.00
60_I	66_A	2.170	1.00
73_I	97_V	2.127	1.00
332_A	367_A	2.103	1.00
130_L	186_A	2.100	1.00
354_E	357_R	2.083	1.00
36_G	110_D	2.081	1.00
345_I	385_L	2.071	1.00
290_G	326_E	2.038	1.00
166_G	190_K	1.980	1.00
368_L	377_V	1.972	1.00
27_I	276_I	1.963	1.00
183_A	187_A	1.918	1.00
163_D	190_K	1.913	1.00
408_C	412_G	1.885	1.00
243_L	254_T	1.872	1.00
329_Q	367_A	1.862	1.00
363_S	366_Q	1.858	1.00
406_P	414_V	1.855	1.00
300_M	385_L	1.854	1.00
260_Y	265_P	1.844	1.00
405_C	410_G	1.823	0.99
381_S	387_E	1.817	0.99
444_A	449_A	1.803	0.99
236_R	240_E	1.793	0.99
178_G	181_E	1.774	0.99
6_L	19_I	1.774	0.99
367_A	370_K	1.766	0.99
321_F	359_R	1.759	0.99
130_L	182_L	1.748	0.99
262_G	269_L	1.741	0.99
168_F	186_A	1.726	0.99
15_R	273_E	1.693	0.99
23_I	333_R	1.670	0.99
265_P	273_E	1.665	0.99
380_F	386_V	1.643	0.99
17_A	24_L	1.639	0.99
158_V	168_F	1.638	0.99
195_K	199_R	1.635	0.99
6_L	272_V	1.635	0.99
93_I	96_L	1.632	0.99
104_M	200_K	1.628	0.99
363_S	367_A	1.626	0.99
107_V	119_L	1.613	0.99
44_G	103_L	1.595	0.99
179_E	183_A	1.589	0.99
44_G	119_L	1.583	0.99
335_L	344_I	1.573	0.98
212_E	221_R	1.571	0.98
315_N	318_D	1.563	0.98
307_T	323_T	1.560	0.98
5_L	18_Y	1.557	0.98
127_S	185_D	1.538	0.98
247_S	254_T	1.529	0.98
280_L	397_I	1.516	0.98
331_I	346_I	1.513	0.98
344_I	388_M	1.512	0.98
108_V	120_T	1.505	0.98
285_E	291_Y	1.505	0.98
20_D	25_Q	1.497	0.98
439_R	472_K	1.487	0.98
50_L	53_M	1.468	0.98
283_K	293_I	1.467	0.98
37_I	40_N	1.444	0.97
292_L	302_T	1.440	0.97
286_L	290_G	1.439	0.97
15_R	267_F	1.434	0.97
13_E	426_R	1.433	0.97
240_E	243_L	1.428	0.97
20_D	370_K	1.425	0.97
379_G	387_E	1.421	0.97
43_K	104_M	1.411	0.97
152_E	156_K	1.403	0.97
8_N	15_R	1.403	0.97
328_T	348_F	1.399	0.97
268_D	273_E	1.398	0.97
325_I	363_S	1.385	0.97
366_Q	369_S	1.376	0.96
403_N	417_V	1.375	0.96
460_L	473_V	1.358	0.96
96_L	101_Q	1.357	0.96
102_D	205_T	1.356	0.96
41_I	303_V	1.349	0.96
345_I	381_S	1.342	0.96
285_E	309_A	1.333	0.96
24_L	275_E	1.325	0.96
43_K	205_T	1.313	0.95
20_D	26_E	1.305	0.95
232_R	266_I	1.287	0.95
44_G	60_I	1.283	0.95
132_F	190_K	1.272	0.94
424_I	442_V	1.272	0.94
253_M	256_K	1.272	0.94
132_F	163_D	1.267	0.94
240_E	244_E	1.266	0.94
287_K	290_G	1.265	0.94
15_R	426_R	1.263	0.94
134_P	193_W	1.260	0.94
330_A	334_Q	1.255	0.94
3_A	20_D	1.253	0.94
153_R	157_V	1.251	0.94
286_L	326_E	1.250	0.94
188_Y	245_F	1.246	0.94
266_I	270_F	1.245	0.94
157_V	179_E	1.242	0.94
296_Q	301_T	1.238	0.94
361_L	379_G	1.235	0.94
284_V	294_I	1.230	0.93
441_L	474_Q	1.226	0.93
443_Y	474_Q	1.217	0.93
360_V	363_S	1.206	0.93
235_S	238_T	1.202	0.93
4_E	232_R	1.202	0.93
382_A	387_E	1.197	0.92
321_F	360_V	1.187	0.92
47_S	65_A	1.179	0.92
125_L	193_W	1.177	0.92
439_R	470_Q	1.167	0.91
276_I	397_I	1.163	0.91
125_L	192_V	1.162	0.91
188_Y	192_V	1.162	0.91
53_M	118_R	1.153	0.91
140_G	155_K	1.152	0.91
305_I	328_T	1.146	0.91
301_T	387_E	1.146	0.91
271_D	274_N	1.146	0.91
13_E	31_R	1.141	0.91
427_E	430_R	1.137	0.90
358_R	362_H	1.132	0.90
360_V	367_A	1.130	0.90
126_P	221_R	1.128	0.90
204_Q	207_Y	1.123	0.90
331_I	335_L	1.122	0.90
170_I	174_A	1.117	0.90
52_G	312_G	1.111	0.89
278_R	285_E	1.110	0.89
446_P	450_E	1.108	0.89
44_G	59_D	1.107	0.89
377_V	388_M	1.106	0.89
20_D	336_R	1.098	0.89
353_N	356_H	1.097	0.89
309_A	381_S	1.092	0.89
294_I	340_L	1.080	0.88
97_V	101_Q	1.080	0.88
339_N	373_V	1.076	0.88
296_Q	302_T	1.074	0.88
163_D	166_G	1.073	0.88
92_D	95_E	1.073	0.88
339_N	393_T	1.071	0.88
302_T	343_I	1.070	0.87
232_R	270_F	1.062	0.87
58_V	119_L	1.058	0.87
318_D	322_N	1.057	0.87
141_V	151_R	1.054	0.87
429_V	466_F	1.053	0.87
30_E	222_D	1.051	0.87
40_N	208_Q	1.050	0.86
4_E	22_G	1.042	0.86
8_N	426_R	1.041	0.86
428_I	440_F	1.040	0.86
133_M	136_A	1.036	0.86
42_Y	208_Q	1.033	0.86
139_V	173_A	1.025	0.85
339_N	372_R	1.022	0.85
325_I	360_V	1.021	0.85
192_V	210_Y	1.019	0.85
316_L	319_T	1.017	0.85
296_Q	396_S	1.016	0.85
56_A	93_I	1.013	0.84
41_I	123_I	1.009	0.84
114_T	291_Y	1.005	0.84
8_N	13_E	1.005	0.84
37_I	107_V	1.005	0.84
222_D	372_R	1.004	0.84
16_V	24_L	1.003	0.84
287_K	291_Y	1.002	0.84
358_R	365_E	0.998	0.84
379_G	382_A	0.994	0.83
198_E	202_R	0.987	0.83
360_V	364_L	0.987	0.83
111_P	118_R	0.986	0.83
68_L	73_I	0.985	0.83
67_F	118_R	0.981	0.82
62_L	117_A	0.979	0.82
402_C	413_T	0.975	0.82
46_V	272_V	0.967	0.82
373_V	392_R	0.954	0.81
17_A	276_I	0.953	0.81
458_H	465_I	0.948	0.80
69_H	316_L	0.947	0.80
328_T	363_S	0.947	0.80
362_H	366_Q	0.946	0.80
99_Q	397_I	0.946	0.80
364_L	388_M	0.942	0.80
463_V	467_V	0.940	0.80
234_D	260_Y	0.939	0.80
239_Y	259_H	0.939	0.80
46_V	49_V	0.937	0.79
36_G	40_N	0.933	0.79
50_L	311_V	0.931	0.79
56_A	97_V	0.929	0.79
417_V	448_V	0.928	0.79
68_L	121_T	0.921	0.78
12_S	422_Y	0.920	0.78
222_D	350_D	0.920	0.78
337_L	410_G	0.915	0.78
157_V	160_E	0.915	0.78
343_I	383_L	0.914	0.78
245_F	250_I	0.914	0.78
325_I	359_R	0.912	0.78
125_L	332_A	0.911	0.78
378_N	392_R	0.909	0.77
288_S	322_N	0.904	0.77
69_H	72_D	0.901	0.77
292_L	418_E	0.900	0.77
45_R	102_D	0.896	0.76
419_T	426_R	0.894	0.76
61_G	64_K	0.894	0.76
220_L	242_L	0.891	0.76
46_V	97_V	0.888	0.76
59_D	65_A	0.887	0.76
454_G	457_S	0.886	0.76
126_P	131_V	0.885	0.75
105_V	119_L	0.882	0.75
307_T	312_G	0.880	0.75
8_N	273_E	0.880	0.75
73_I	121_T	0.879	0.75
196_V	340_L	0.867	0.74
254_T	257_L	0.864	0.74
432_H	469_K	0.863	0.74
455_E	463_V	0.853	0.73
343_I	350_D	0.852	0.73
126_P	132_F	0.847	0.72
62_L	276_I	0.847	0.72
162_C	168_F	0.846	0.72
50_L	118_R	0.844	0.72
69_H	118_R	0.842	0.72
381_S	392_R	0.841	0.72
192_V	245_F	0.841	0.72
316_L	320_I	0.840	0.72
359_R	363_S	0.838	0.71
67_F	72_D	0.836	0.71
145_I	154_L	0.836	0.71
332_A	368_L	0.832	0.71
9_V	238_T	0.832	0.71
58_V	355_D	0.831	0.71
46_V	305_I	0.830	0.71
465_I	470_Q	0.829	0.71
120_T	218_R	0.826	0.70
451_A	456_E	0.825	0.70
151_R	218_R	0.824	0.70
104_M	195_K	0.820	0.70
200_K	209_L	0.817	0.69
184_S	248_E	0.816	0.69
58_V	68_L	0.816	0.69
161_Y	183_A	0.814	0.69
53_M	307_T	0.813	0.69
360_V	380_F	0.811	0.69
249_Y	339_N	0.810	0.69
421_C	452_L	0.810	0.69
182_L	377_V	0.809	0.69
130_L	235_S	0.807	0.68
284_V	337_L	0.806	0.68
383_L	391_K	0.806	0.68
296_Q	398_E	0.805	0.68
243_L	255_S	0.805	0.68
295_D	301_T	0.805	0.68
4_E	209_L	0.805	0.68
112_L	392_R	0.801	0.68
330_A	333_R	0.799	0.68
154_L	158_V	0.799	0.68
239_Y	257_L	0.796	0.67
197_M	201_K	0.796	0.67
126_P	159_A	0.794	0.67
296_Q	340_L	0.793	0.67
361_L	383_L	0.792	0.67
132_F	165_Q	0.791	0.67
275_E	278_R	0.789	0.67
137_S	162_C	0.788	0.67
243_L	257_L	0.788	0.67
292_L	333_R	0.783	0.66
52_G	319_T	0.781	0.66
53_M	391_K	0.780	0.66
17_A	27_I	0.779	0.66
444_A	473_V	0.775	0.65
250_I	253_M	0.773	0.65
268_D	430_R	0.772	0.65
31_R	419_T	0.769	0.65
152_E	362_H	0.769	0.65
343_I	385_L	0.767	0.65
157_V	170_I	0.766	0.64
128_R	336_R	0.766	0.64
275_E	280_L	0.766	0.64
128_R	250_I	0.764	0.64
452_L	463_V	0.763	0.64
277_Q	281_E	0.760	0.64
221_R	350_D	0.759	0.64
464_E	470_Q	0.759	0.64
335_L	387_E	0.759	0.64
67_F	383_L	0.757	0.64
467_V	470_Q	0.754	0.63
438_D	441_L	0.754	0.63
75_P	122_D	0.753	0.63
284_V	334_Q	0.747	0.62
188_Y	210_Y	0.746	0.62
357_R	380_F	0.742	0.62
365_E	377_V	0.741	0.62
19_I	445_S	0.737	0.61
274_N	277_Q	0.734	0.61
223_F	256_K	0.733	0.61
61_G	116_G	0.730	0.61
64_K	116_G	0.729	0.61
298_E	306_N	0.728	0.60
66_A	367_A	0.727	0.60
411_R	444_A	0.725	0.60
128_R	131_V	0.724	0.60
45_R	206_R	0.722	0.60
438_D	469_K	0.721	0.60
18_Y	26_E	0.720	0.60
98_R	101_Q	0.720	0.60
68_L	357_R	0.719	0.60
218_R	221_R	0.719	0.60
111_P	394_R	0.717	0.59
117_A	316_L	0.716	0.59
361_L	381_S	0.716	0.59
50_L	307_T	0.714	0.59
470_Q	474_Q	0.714	0.59
354_E	358_R	0.714	0.59
141_V	181_E	0.713	0.59
264_Q	269_L	0.711	0.59
158_V	186_A	0.710	0.59
442_V	473_V	0.707	0.58
172_T	371_D	0.705	0.58
307_T	319_T	0.705	0.58
450_E	453_K	0.705	0.58
3_A	227_E	0.705	0.58
126_P	173_A	0.705	0.58
240_E	246_T	0.704	0.58
53_M	117_A	0.704	0.58
161_Y	186_A	0.703	0.58
325_I	329_Q	0.702	0.58
219_V	380_F	0.702	0.58
460_L	464_E	0.699	0.57
442_V	449_A	0.699	0.57
11_P	51_P	0.698	0.57
26_E	372_R	0.696	0.57
305_I	322_N	0.696	0.57
60_I	65_A	0.696	0.57
123_I	196_V	0.695	0.57
31_R	66_A	0.692	0.57
133_M	360_V	0.692	0.57
168_F	190_K	0.691	0.57
125_L	196_V	0.689	0.56
67_F	193_W	0.689	0.56
231_I	269_L	0.687	0.56
375_T	387_E	0.687	0.56
449_A	452_L	0.686	0.56
71_S	333_R	0.686	0.56
164_E	209_L	0.685	0.56
237_L	366_Q	0.685	0.56
55_A	316_L	0.684	0.56
266_I	399_H	0.684	0.56
462_E	466_F	0.681	0.55
428_I	467_V	0.680	0.55
290_G	323_T	0.680	0.55
420_V	448_V	0.679	0.55
195_K	198_E	0.679	0.55
161_Y	277_Q	0.678	0.55
459_S	462_E	0.678	0.55
211_G	231_I	0.676	0.55
343_I	381_S	0.674	0.55
242_L	246_T	0.673	0.55
317_D	353_N	0.672	0.54
461_A	468_G	0.672	0.54
156_K	160_E	0.671	0.54
112_L	118_R	0.670	0.54
432_H	440_F	0.669	0.54
70_A	95_E	0.669	0.54
458_H	470_Q	0.669	0.54
312_G	391_K	0.669	0.54
92_D	160_E	0.668	0.54
404_E	407_T	0.666	0.54
137_S	165_Q	0.663	0.53
16_V	339_N	0.663	0.53
301_T	400_V	0.662	0.53
378_N	383_L	0.659	0.53
238_T	241_A	0.658	0.53
53_M	316_L	0.657	0.53
224_A	253_M	0.657	0.53
438_D	465_I	0.656	0.53
199_R	257_L	0.655	0.53
442_V	452_L	0.655	0.53
232_R	330_A	0.655	0.53
125_L	309_A	0.653	0.52
16_V	28_H	0.652	0.52
231_I	256_K	0.651	0.52
292_L	437_S	0.650	0.52
453_K	456_E	0.648	0.52
237_L	241_A	0.647	0.52
361_L	365_E	0.646	0.52
244_E	248_E	0.646	0.52
111_P	212_E	0.645	0.51
49_V	97_V	0.642	0.51
37_I	110_D	0.642	0.51
294_I	297_T	0.639	0.51
462_E	465_I	0.639	0.51
116_G	134_P	0.638	0.51
162_C	186_A	0.637	0.51
133_M	138_H	0.637	0.51
294_I	334_Q	0.637	0.51
455_E	467_V	0.635	0.50
141_V	145_I	0.634	0.50
147_S	150_E	0.632	0.50
451_A	454_G	0.632	0.50
131_V	287_K	0.631	0.50
343_I	391_K	0.631	0.50
117_A	305_I	0.630	0.50
310_F	319_T	0.630	0.50
35_R	211_G	0.630	0.50
167_G	231_I	0.630	0.50
167_G	388_M	0.629	0.50
38_V	393_T	0.629	0.50
203_P	315_N	0.627	0.49
191_R	313_H	0.626	0.49
48_R	99_Q	0.624	0.49
104_M	120_T	0.623	0.49
49_V	158_V	0.623	0.49
26_E	39_G	0.622	0.49
88_F	91_R	0.620	0.49
69_H	231_I	0.620	0.49
418_E	455_E	0.620	0.49
46_V	58_V	0.619	0.49
131_V	221_R	0.619	0.49
19_I	24_L	0.615	0.48
73_I	96_L	0.615	0.48
49_V	301_T	0.615	0.48
359_R	414_V	0.615	0.48
144_R	447_A	0.614	0.48
421_C	450_E	0.614	0.48
231_I	340_L	0.613	0.48
17_A	267_F	0.612	0.48
16_V	219_V	0.611	0.48
430_R	435_Y	0.610	0.48
125_L	264_Q	0.610	0.48
46_V	381_S	0.608	0.47
417_V	420_V	0.608	0.47
139_V	158_V	0.608	0.47
39_G	272_V	0.608	0.47
59_D	229_D	0.607	0.47
13_E	419_T	0.607	0.47
255_S	261_T	0.606	0.47
23_I	329_Q	0.605	0.47
64_K	374_K	0.605	0.47
173_A	185_D	0.604	0.47
425_M	431_V	0.604	0.47
403_N	406_P	0.602	0.47
447_A	459_S	0.602	0.47
344_I	465_I	0.601	0.47
404_E	428_I	0.601	0.47
45_R	205_T	0.600	0.46
395_E	399_H	0.598	0.46
120_T	464_E	0.598	0.46
124_T	172_T	0.598	0.46
281_E	411_R	0.597	0.46
180_A	183_A	0.597	0.46
264_Q	353_N	0.597	0.46
144_R	279_A	0.596	0.46
284_V	377_V	0.596	0.46
6_L	232_R	0.595	0.46
147_S	350_D	0.595	0.46
236_R	466_F	0.594	0.46
227_E	256_K	0.592	0.46
266_I	374_K	0.589	0.45
120_T	376_S	0.589	0.45
358_R	439_R	0.588	0.45
230_R	270_F	0.588	0.45
4_E	72_D	0.586	0.45
369_S	449_A	0.585	0.45
438_D	462_E	0.585	0.45
161_Y	168_F	0.585	0.45
295_D	302_T	0.584	0.45
110_D	174_A	0.584	0.45
40_N	110_D	0.584	0.45
69_H	389_T	0.584	0.45
117_A	311_V	0.584	0.45
104_M	207_Y	0.583	0.45
187_A	190_K	0.583	0.45
194_T	198_E	0.582	0.44
140_G	380_F	0.582	0.44
128_R	222_D	0.582	0.44
242_L	257_L	0.581	0.44
251_P	336_R	0.580	0.44
150_E	157_V	0.579	0.44
220_L	339_N	0.579	0.44
100_G	358_R	0.579	0.44
10_T	209_L	0.579	0.44
149_S	254_T	0.579	0.44
440_F	471_V	0.579	0.44
26_E	336_R	0.577	0.44
246_T	254_T	0.577	0.44
409_H	432_H	0.577	0.44
307_T	391_K	0.576	0.44
56_A	389_T	0.576	0.44
149_S	187_A	0.575	0.44
305_I	468_G	0.574	0.44
187_A	244_E	0.573	0.44
56_A	70_A	0.573	0.44
161_Y	182_L	0.571	0.43
103_L	365_E	0.570	0.43
123_I	262_G	0.570	0.43
398_E	413_T	0.569	0.43
91_R	292_L	0.568	0.43
163_D	224_A	0.568	0.43
218_R	222_D	0.568	0.43
331_I	354_E	0.567	0.43
8_N	341_G	0.566	0.43
458_H	472_K	0.566	0.43
129_Y	222_D	0.566	0.43
458_H	461_A	0.565	0.43
420_V	431_V	0.565	0.43
290_G	344_I	0.564	0.43
305_I	327_A	0.564	0.43
334_Q	338_R	0.563	0.42
52_G	310_F	0.562	0.42
184_S	229_D	0.561	0.42
465_I	469_K	0.561	0.42
312_G	319_T	0.559	0.42
143_Q	374_K	0.559	0.42
186_A	190_K	0.556	0.42
268_D	403_N	0.555	0.42
154_L	157_V	0.554	0.41
450_E	456_E	0.554	0.41
105_V	428_I	0.553	0.41
433_H	470_Q	0.552	0.41
92_D	96_L	0.552	0.41
54_Q	94_S	0.551	0.41
335_L	388_M	0.551	0.41
235_S	466_F	0.550	0.41
240_E	254_T	0.549	0.41
404_E	409_H	0.549	0.41
98_R	346_I	0.549	0.41
441_L	472_K	0.548	0.41
231_I	249_Y	0.548	0.41
465_I	468_G	0.547	0.41
236_R	261_T	0.547	0.41
153_R	241_A	0.547	0.41
422_Y	426_R	0.547	0.41
417_V	458_H	0.547	0.41
333_R	337_L	0.546	0.41
76_H	197_M	0.546	0.41
337_L	412_G	0.545	0.40
449_A	472_K	0.545	0.40
97_V	192_V	0.545	0.40
427_E	435_Y	0.545	0.40
468_G	471_V	0.544	0.40
343_I	389_T	0.543	0.40
138_H	392_R	0.543	0.40
100_G	381_S	0.543	0.40
294_I	330_A	0.542	0.40
276_I	341_G	0.542	0.40
442_V	446_P	0.542	0.40
272_V	409_H	0.541	0.40
8_N	17_A	0.539	0.40
308_G	313_H	0.539	0.40
18_Y	448_V	0.539	0.40
47_S	58_V	0.539	0.40
343_I	361_L	0.538	0.40
325_I	367_A	0.537	0.40
208_Q	211_G	0.537	0.40
109_K	172_T	0.537	0.40
461_A	474_Q	0.536	0.40
436_D	467_V	0.535	0.39
66_A	107_V	0.535	0.39
461_A	465_I	0.535	0.39
418_E	422_Y	0.535	0.39
307_T	316_L	0.534	0.39
277_Q	452_L	0.534	0.39
40_N	54_Q	0.533	0.39
293_I	306_N	0.533	0.39
440_F	458_H	0.532	0.39
46_V	368_L	0.532	0.39
232_R	258_E	0.531	0.39
129_Y	418_E	0.530	0.39
287_K	326_E	0.530	0.39
53_M	310_F	0.528	0.39
437_S	459_S	0.528	0.39
417_V	445_S	0.527	0.39
359_R	442_V	0.527	0.39
134_P	167_G	0.526	0.38
36_G	395_E	0.524	0.38
145_I	333_R	0.524	0.38
30_E	131_V	0.524	0.38
333_R	340_L	0.523	0.38
303_V	381_S	0.523	0.38
359_R	366_Q	0.522	0.38
143_Q	469_K	0.521	0.38
194_T	241_A	0.520	0.38
460_L	470_Q	0.520	0.38
128_R	185_D	0.519	0.38
55_A	72_D	0.519	0.38
5_L	357_R	0.519	0.38
55_A	319_T	0.518	0.38
107_V	245_F	0.518	0.38
15_R	275_E	0.518	0.38
90_V	95_E	0.518	0.38
110_D	307_T	0.517	0.38
431_V	443_Y	0.516	0.37
314_R	323_T	0.516	0.37
53_M	386_V	0.516	0.37
310_F	391_K	0.515	0.37
107_V	177_V	0.515	0.37
198_E	386_V	0.515	0.37
152_E	276_I	0.515	0.37
155_K	178_G	0.515	0.37
158_V	472_K	0.515	0.37
305_I	346_I	0.513	0.37
130_L	158_V	0.513	0.37
162_C	300_M	0.513	0.37
228_L	387_E	0.512	0.37
50_L	316_L	0.512	0.37
168_F	335_L	0.511	0.37
65_A	295_D	0.511	0.37
217_Q	360_V	0.511	0.37
158_V	294_I	0.511	0.37
467_V	472_K	0.510	0.37
247_S	438_D	0.510	0.37
52_G	323_T	0.510	0.37
458_H	463_V	0.510	0.37
41_I	209_L	0.510	0.37
198_E	201_K	0.509	0.37
457_S	463_V	0.509	0.37
364_L	375_T	0.509	0.37
101_Q	158_V	0.509	0.37
337_L	353_N	0.509	0.37
220_L	224_A	0.508	0.37
79_C	88_F	0.508	0.37
76_H	125_L	0.508	0.37
24_L	459_S	0.507	0.36
134_P	212_E	0.507	0.36
454_G	464_E	0.506	0.36
449_A	454_G	0.505	0.36
151_R	286_L	0.505	0.36
178_G	243_L	0.505	0.36
364_L	380_F	0.505	0.36
141_V	396_S	0.505	0.36
422_Y	456_E	0.504	0.36
439_R	469_K	0.502	0.36
136_A	233_V	0.502	0.36
414_V	449_A	0.500	0.36
240_E	259_H	0.500	0.36

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2bx2L	3	0.9571	100	0.105	Contact Map
4oxpA	1	0.3681	100	0.653	Contact Map
3cw2C	1	0.4703	99.9	0.847	Contact Map
3aevA	1	0.3211	99.2	0.914	Contact Map
4nngA	1	0.319	99	0.921	Contact Map
1kl9A	2	0.3047	98.1	0.94	Contact Map
1wi5A	1	0.2352	97.9	0.944	Contact Map
2k52A	1	0.1513	97.9	0.944	Contact Map
2ja9A	2	0.3354	97.9	0.944	Contact Map
4aidA	3	0.0041	97.8	0.945	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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