FABB - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

FABB - 3-oxoacyl-[acyl-carrier-protein] synthase 1

UniProt:	P0A953	Sequences: MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10274
Length:	406 (386)
Sequences:	20947 (13517)
Seq/√Len:	688.0

ECOLI - FABB FABF
BACSU - FABF PKSF PKSL PKSJ PKSN PKSM PKSR

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
278_V	315_E	3.227	1.00
258_V	402_R	3.082	1.00
18_N	21_E	2.888	1.00
346_S	385_V	2.861	1.00
98_R	183_D	2.756	1.00
171_G	260_Y	2.730	1.00
24_A	28_E	2.683	1.00
255_A	347_L	2.680	1.00
224_A	363_E	2.657	1.00
224_A	366_E	2.579	1.00
384_T	402_R	2.569	1.00
354_F	377_T	2.501	1.00
254_Y	351_E	2.365	1.00
82_A	239_V	2.270	1.00
85_D	254_Y	2.269	1.00
222_Y	297_S	2.250	1.00
242_E	245_H	2.245	1.00
27_R	354_F	2.242	1.00
25_S	32_G	2.200	1.00
78_S	235_G	2.154	1.00
177_I	242_E	2.152	1.00
221_T	329_A	2.109	1.00
25_S	30_R	2.092	1.00
349_M	356_A	2.091	1.00
291_P	384_T	2.074	1.00
343_A	401_M	2.055	1.00
102_I	176_Q	2.044	1.00
170_I	343_A	2.044	1.00
3_R	258_V	2.010	1.00
278_V	282_K	1.989	1.00
241_E	251_A	1.969	1.00
354_F	379_D	1.949	1.00
357_P	377_T	1.945	1.00
175_E	179_L	1.939	1.00
225_H	363_E	1.931	1.00
371_L	378_T	1.919	1.00
105_S	142_V	1.902	1.00
323_A	378_T	1.897	1.00
241_E	249_R	1.835	1.00
80_E	84_A	1.820	1.00
100_G	185_V	1.817	1.00
216_E	227_D	1.816	1.00
79_M	146_L	1.815	1.00
372_N	378_T	1.809	1.00
383_T	403_K	1.791	1.00
60_I	68_M	1.781	1.00
33_I	50_G	1.760	1.00
79_M	186_F	1.759	1.00
13_S	341_Q	1.748	1.00
288_V	384_T	1.738	1.00
243_L	247_L	1.730	1.00
103_A	237_M	1.720	1.00
98_R	283_M	1.719	1.00
6_I	343_A	1.703	1.00
245_H	248_A	1.700	1.00
236_G	340_V	1.692	1.00
355_I	374_V	1.691	1.00
35_F	48_V	1.691	1.00
17_N	21_E	1.687	1.00
348_L	351_E	1.675	1.00
348_L	352_H	1.665	1.00
225_H	362_E	1.663	1.00
35_F	47_H	1.652	1.00
182_Q	185_V	1.649	1.00
174_V	257_I	1.637	1.00
188_G	237_M	1.626	1.00
34_T	53_K	1.610	1.00
278_V	316_V	1.598	1.00
6_I	347_L	1.594	1.00
31_S	218_A	1.593	1.00
174_V	178_Q	1.592	1.00
22_V	327_T	1.589	1.00
343_A	387_S	1.586	1.00
232_A	334_S	1.581	1.00
252_H	351_E	1.567	1.00
104_G	165_T	1.565	1.00
238_V	343_A	1.562	1.00
10_G	78_S	1.560	1.00
186_F	239_V	1.546	1.00
89_S	92_A	1.534	1.00
176_Q	182_Q	1.531	1.00
55_D	58_G	1.527	1.00
263_T	396_N	1.526	1.00
147_A	156_N	1.525	1.00
327_T	341_Q	1.521	1.00
75_A	146_L	1.515	1.00
295_L	313_I	1.512	1.00
323_A	372_N	1.511	1.00
78_S	237_M	1.507	1.00
258_V	384_T	1.498	1.00
223_D	361_I	1.488	1.00
75_A	103_A	1.477	1.00
168_H	397_A	1.473	1.00
175_E	181_K	1.469	1.00
161_S	164_A	1.460	1.00
236_G	344_I	1.452	1.00
70_D	74_Y	1.449	1.00
22_V	345_Y	1.448	1.00
27_R	377_T	1.439	1.00
9_L	19_Q	1.435	1.00
99_V	184_I	1.422	1.00
85_D	252_H	1.422	1.00
94_Q	151_K	1.411	1.00
45_R	202_D	1.408	1.00
80_E	149_P	1.406	1.00
260_Y	399_L	1.404	1.00
294_Y	355_I	1.394	1.00
184_I	239_V	1.393	1.00
329_A	359_I	1.382	1.00
292_I	384_T	1.375	1.00
353_G	383_T	1.374	1.00
216_E	220_R	1.373	1.00
157_Y	172_N	1.371	1.00
234_G	334_S	1.371	1.00
314_R	369_A	1.371	1.00
75_A	237_M	1.371	1.00
100_G	182_Q	1.366	1.00
153_H	279_R	1.361	1.00
323_A	374_V	1.355	1.00
279_R	283_M	1.336	1.00
3_R	256_E	1.335	1.00
220_R	225_H	1.332	1.00
168_H	395_T	1.332	1.00
386_M	400_V	1.321	1.00
323_A	355_I	1.311	1.00
176_Q	181_K	1.302	1.00
100_G	155_V	1.296	1.00
223_D	363_E	1.294	1.00
24_A	30_R	1.293	1.00
4_A	240_V	1.292	1.00
75_A	142_V	1.291	1.00
21_E	24_A	1.288	1.00
358_S	361_I	1.288	1.00
310_L	324_I	1.280	1.00
175_E	178_Q	1.276	1.00
144_A	393_G	1.272	1.00
263_T	280_C	1.269	1.00
238_V	340_V	1.269	1.00
223_D	362_E	1.268	1.00
143_S	158_S	1.266	1.00
15_I	32_G	1.262	1.00
254_Y	347_L	1.261	1.00
386_M	398_T	1.261	1.00
361_I	364_L	1.260	1.00
4_A	174_V	1.257	1.00
294_Y	325_S	1.253	1.00
329_A	358_S	1.250	1.00
9_L	344_I	1.238	1.00
355_I	380_R	1.236	1.00
353_G	403_K	1.231	1.00
380_R	383_T	1.222	1.00
388_N	398_T	1.222	1.00
24_A	27_R	1.222	1.00
350_L	401_M	1.222	1.00
208_S	227_D	1.221	1.00
261_G	280_C	1.220	1.00
280_C	284_A	1.209	1.00
282_K	286_H	1.198	1.00
183_D	245_H	1.193	1.00
37_Q	40_K	1.188	1.00
261_G	284_A	1.185	1.00
238_V	344_I	1.177	1.00
11_I	19_Q	1.169	1.00
103_A	188_G	1.167	1.00
331_T	341_Q	1.160	1.00
220_R	227_D	1.150	1.00
365_D	368_A	1.150	1.00
13_S	236_G	1.144	1.00
168_H	262_A	1.144	1.00
294_Y	346_S	1.142	1.00
334_S	341_Q	1.140	1.00
215_P	227_D	1.139	1.00
79_M	237_M	1.136	1.00
8_G	85_D	1.122	1.00
170_I	240_V	1.120	1.00
361_I	373_I	1.120	1.00
243_L	256_E	1.106	1.00
313_I	324_I	1.104	1.00
156_N	264_S	1.103	1.00
26_L	345_Y	1.101	1.00
189_G	340_V	1.098	1.00
293_D	383_T	1.098	1.00
82_A	237_M	1.097	1.00
327_T	331_T	1.091	1.00
310_L	368_A	1.091	1.00
3_R	243_L	1.086	1.00
9_L	254_Y	1.086	1.00
167_A	397_A	1.083	1.00
291_P	381_E	1.082	1.00
20_Q	85_D	1.080	1.00
23_L	352_H	1.078	1.00
288_V	291_P	1.075	1.00
11_I	344_I	1.074	1.00
330_M	359_I	1.062	1.00
33_I	48_V	1.062	1.00
346_S	350_L	1.060	1.00
31_S	360_N	1.059	1.00
281_M	316_V	1.058	1.00
293_D	380_R	1.055	1.00
50_G	232_A	1.054	1.00
285_M	292_I	1.051	1.00
173_A	187_A	1.048	1.00
80_E	150_F	1.044	1.00
11_I	22_V	1.041	1.00
147_A	264_S	1.036	1.00
374_V	378_T	1.033	1.00
37_Q	51_N	1.033	1.00
311_A	315_E	1.027	1.00
58_G	80_E	1.027	1.00
82_A	186_F	1.023	1.00
362_E	375_T	1.023	1.00
290_T	320_K	1.017	1.00
159_I	172_N	1.010	1.00
170_I	399_L	1.003	1.00
317_F	386_M	0.999	1.00
7_T	241_E	0.996	1.00
83_I	150_F	0.995	1.00
78_S	81_Q	0.995	1.00
217_K	362_E	0.989	1.00
167_A	399_L	0.976	1.00
281_M	386_M	0.975	1.00
102_I	185_V	0.975	1.00
346_S	387_S	0.974	1.00
10_G	82_A	0.973	1.00
303_P	367_Q	0.968	1.00
244_E	247_L	0.965	1.00
293_D	381_E	0.965	1.00
183_D	242_E	0.962	1.00
170_I	187_A	0.961	1.00
99_V	152_I	0.960	1.00
177_I	240_V	0.956	1.00
23_L	356_A	0.954	1.00
171_G	181_K	0.951	1.00
361_I	375_T	0.951	1.00
17_N	53_K	0.950	1.00
9_L	347_L	0.943	1.00
231_I	335_L	0.943	1.00
256_E	402_R	0.943	1.00
281_M	388_N	0.941	1.00
307_V	311_A	0.937	1.00
350_L	353_G	0.936	1.00
285_M	317_F	0.936	1.00
36_S	41_D	0.931	1.00
283_M	286_H	0.929	1.00
172_N	175_E	0.921	1.00
347_L	401_M	0.915	1.00
353_G	381_E	0.915	1.00
246_A	253_I	0.913	1.00
27_R	352_H	0.908	1.00
44_M	202_D	0.907	1.00
20_Q	24_A	0.905	1.00
234_G	341_Q	0.903	1.00
342_E	387_S	0.899	1.00
296_N	342_E	0.899	1.00
173_A	185_V	0.897	1.00
16_G	25_S	0.897	1.00
13_S	344_I	0.896	1.00
141_G	269_M	0.892	1.00
5_V	243_L	0.891	1.00
5_V	256_E	0.890	1.00
166_S	340_V	0.890	1.00
74_Y	235_G	0.889	1.00
174_V	260_Y	0.885	1.00
171_G	175_E	0.882	1.00
297_S	324_I	0.881	1.00
83_I	186_F	0.879	1.00
292_I	317_F	0.878	1.00
52_V	74_Y	0.878	1.00
274_G	311_A	0.874	1.00
285_M	288_V	0.873	1.00
75_A	188_G	0.871	1.00
29_G	357_P	0.869	1.00
166_S	189_G	0.867	1.00
23_L	27_R	0.864	1.00
161_S	168_H	0.858	1.00
271_A	304_V	0.856	1.00
295_L	386_M	0.856	1.00
284_A	400_V	0.852	1.00
299_G	305_G	0.852	1.00
364_L	373_I	0.851	1.00
10_G	81_Q	0.851	1.00
108_G	139_A	0.850	1.00
29_G	376_E	0.842	1.00
372_N	375_T	0.840	1.00
101_L	152_I	0.840	1.00
299_G	326_A	0.838	1.00
350_L	382_L	0.832	1.00
153_H	275_E	0.832	1.00
9_L	85_D	0.831	1.00
263_T	279_R	0.831	1.00
275_E	278_V	0.830	1.00
3_R	244_E	0.830	1.00
292_I	400_V	0.830	1.00
167_A	339_G	0.827	1.00
31_S	359_I	0.826	1.00
22_V	331_T	0.825	1.00
12_V	81_Q	0.824	1.00
242_E	247_L	0.824	1.00
18_N	81_Q	0.822	1.00
32_G	50_G	0.822	1.00
208_S	220_R	0.820	1.00
61_D	64_V	0.817	1.00
134_V	200_E	0.816	1.00
310_L	372_N	0.815	1.00
23_L	348_L	0.814	1.00
9_L	348_L	0.810	1.00
288_V	400_V	0.808	1.00
245_H	249_R	0.806	1.00
184_I	187_A	0.802	1.00
12_V	77_L	0.801	1.00
105_S	139_A	0.798	1.00
144_A	156_N	0.797	1.00
326_A	358_S	0.796	1.00
54_L	77_L	0.796	1.00
346_S	349_M	0.796	1.00
16_G	32_G	0.795	1.00
282_K	316_V	0.794	1.00
281_M	312_A	0.793	1.00
243_L	253_I	0.791	1.00
275_E	279_R	0.790	1.00
277_A	390_F	0.790	1.00
279_R	282_K	0.787	1.00
282_K	315_E	0.783	1.00
76_F	149_P	0.782	1.00
33_I	230_V	0.782	1.00
334_S	337_A	0.780	1.00
347_L	350_L	0.779	1.00
186_F	237_M	0.778	1.00
20_Q	352_H	0.776	1.00
258_V	288_V	0.776	1.00
15_I	25_S	0.775	1.00
106_G	336_G	0.772	1.00
310_L	314_R	0.771	1.00
41_D	47_H	0.770	1.00
318_G	321_S	0.769	1.00
79_M	82_A	0.768	1.00
83_I	239_V	0.766	1.00
293_D	384_T	0.762	1.00
155_V	182_Q	0.761	1.00
102_I	182_Q	0.758	1.00
298_H	302_T	0.756	1.00
170_I	340_V	0.752	1.00
5_V	253_I	0.751	1.00
184_I	245_H	0.751	1.00
17_N	25_S	0.748	1.00
86_A	239_V	0.747	1.00
296_N	345_Y	0.746	1.00
97_P	183_D	0.745	1.00
21_E	25_S	0.743	1.00
285_M	400_V	0.739	1.00
281_M	285_M	0.735	1.00
263_T	283_M	0.731	1.00
167_A	387_S	0.724	1.00
34_T	51_N	0.724	1.00
190_G	235_G	0.724	1.00
381_E	403_K	0.722	1.00
187_A	240_V	0.721	1.00
281_M	313_I	0.721	1.00
46_S	202_D	0.718	1.00
262_A	397_A	0.718	1.00
302_T	305_G	0.718	1.00
371_L	375_T	0.718	1.00
282_K	319_D	0.716	1.00
69_S	112_F	0.715	1.00
105_S	158_S	0.715	1.00
206_A	229_F	0.712	1.00
79_M	150_F	0.712	1.00
25_S	28_E	0.712	1.00
19_Q	348_L	0.711	1.00
3_R	178_Q	0.710	1.00
374_V	377_T	0.708	1.00
170_I	238_V	0.706	1.00
314_R	370_G	0.705	1.00
102_I	157_Y	0.705	1.00
358_S	373_I	0.701	1.00
12_V	78_S	0.701	1.00
97_P	153_H	0.701	1.00
294_Y	385_V	0.695	1.00
36_S	51_N	0.694	1.00
70_D	73_I	0.694	1.00
314_R	318_G	0.691	1.00
255_A	401_M	0.691	1.00
170_I	257_I	0.688	1.00
274_G	278_V	0.685	1.00
83_I	93_Y	0.685	1.00
350_L	403_K	0.683	1.00
4_A	242_E	0.682	1.00
307_V	367_Q	0.682	1.00
101_L	146_L	0.681	1.00
280_C	398_T	0.680	1.00
259_G	284_A	0.679	1.00
129_V	199_C	0.678	1.00
355_I	382_L	0.677	1.00
45_R	205_G	0.677	1.00
71_A	190_G	0.673	1.00
310_L	369_A	0.671	1.00
140_S	162_A	0.671	1.00
152_I	186_F	0.671	1.00
38_E	70_D	0.671	1.00
304_V	308_K	0.670	1.00
36_S	39_L	0.667	1.00
257_I	399_L	0.666	1.00
167_A	389_S	0.666	1.00
274_G	312_A	0.666	1.00
293_D	382_L	0.666	1.00
247_L	253_I	0.666	1.00
14_S	334_S	0.665	1.00
201_F	206_A	0.665	1.00
199_C	202_D	0.664	1.00
106_G	109_S	0.664	1.00
347_L	351_E	0.663	1.00
327_T	345_Y	0.661	1.00
22_V	341_Q	0.661	1.00
219_S	229_F	0.657	1.00
49_W	52_V	0.656	1.00
138_M	141_G	0.656	1.00
15_I	34_T	0.655	1.00
313_I	371_L	0.654	1.00
184_I	241_E	0.653	1.00
109_S	113_Q	0.650	1.00
72_S	141_G	0.649	1.00
244_E	248_A	0.647	1.00
353_G	379_D	0.647	1.00
83_I	152_I	0.646	1.00
37_Q	41_D	0.645	1.00
19_Q	85_D	0.642	1.00
226_R	365_D	0.642	1.00
96_N	151_K	0.640	1.00
8_G	82_A	0.640	1.00
81_Q	85_D	0.639	1.00
311_A	367_Q	0.639	1.00
355_I	378_T	0.638	1.00
229_F	335_L	0.637	1.00
191_E	335_L	0.637	1.00
263_T	276_G	0.634	1.00
323_A	380_R	0.632	1.00
26_L	348_L	0.631	1.00
220_R	362_E	0.631	1.00
201_F	392_F	0.630	1.00
349_M	380_R	0.628	1.00
141_G	392_F	0.627	1.00
77_L	81_Q	0.627	1.00
370_G	373_I	0.625	1.00
369_A	372_N	0.624	1.00
42_S	45_R	0.624	1.00
48_V	218_A	0.624	1.00
187_A	238_V	0.623	1.00
75_A	79_M	0.622	1.00
237_M	340_V	0.619	1.00
157_Y	161_S	0.617	1.00
187_A	340_V	0.615	1.00
274_G	308_K	0.613	1.00
176_Q	185_V	0.613	1.00
262_A	395_T	0.612	1.00
331_T	334_S	0.612	1.00
72_S	142_V	0.610	1.00
19_Q	22_V	0.609	1.00
98_R	279_R	0.608	1.00
6_I	401_M	0.604	1.00
380_R	385_V	0.603	1.00
100_G	176_Q	0.602	1.00
220_R	360_N	0.600	1.00
241_E	245_H	0.600	1.00
54_L	59_L	0.599	1.00
22_V	26_L	0.596	1.00
90_P	93_Y	0.596	1.00
172_N	176_Q	0.595	1.00
275_E	315_E	0.595	1.00
4_A	177_I	0.594	1.00
93_Y	99_V	0.594	1.00
153_H	276_G	0.594	1.00
36_S	49_W	0.594	1.00
296_N	346_S	0.594	1.00
278_V	312_A	0.593	1.00
285_M	398_T	0.589	1.00
14_S	50_G	0.588	1.00
103_A	143_S	0.588	1.00
382_L	402_R	0.588	1.00
206_A	392_F	0.586	1.00
96_N	153_H	0.584	1.00
7_T	184_I	0.584	1.00
16_G	53_K	0.582	1.00
208_S	216_E	0.582	1.00
35_F	41_D	0.582	1.00
350_L	385_V	0.581	1.00
310_L	371_L	0.580	1.00
68_M	145_C	0.580	1.00
15_I	22_V	0.578	1.00
288_V	292_I	0.578	1.00
82_A	86_A	0.578	1.00
7_T	251_A	0.578	1.00
324_I	371_L	0.577	1.00
81_Q	84_A	0.577	1.00
102_I	172_N	0.575	1.00
236_G	337_A	0.573	1.00
162_A	392_F	0.573	1.00
297_S	326_A	0.572	1.00
177_I	245_H	0.572	1.00
370_G	375_T	0.570	1.00
219_S	301_S	0.570	1.00
323_A	373_I	0.563	1.00
323_A	371_L	0.561	1.00
371_L	374_V	0.561	1.00
19_Q	344_I	0.560	1.00
71_A	142_V	0.559	1.00
274_G	315_E	0.559	1.00
257_I	401_M	0.558	1.00
325_S	356_A	0.556	1.00
297_S	313_I	0.555	1.00
343_A	347_L	0.554	1.00
93_Y	97_P	0.552	1.00
349_M	385_V	0.551	1.00
60_I	77_L	0.549	1.00
173_A	240_V	0.545	1.00
277_A	312_A	0.544	1.00
216_E	230_V	0.541	1.00
88_L	184_I	0.540	1.00
88_L	239_V	0.540	1.00
312_A	316_V	0.539	1.00
38_E	51_N	0.539	1.00
165_T	169_C	0.538	1.00
221_T	229_F	0.537	1.00
273_S	276_G	0.537	1.00
91_E	94_Q	0.533	1.00
319_D	370_G	0.533	1.00
168_H	172_N	0.533	1.00
171_G	262_A	0.532	1.00
131_P	200_E	0.531	1.00
219_S	230_V	0.531	1.00
12_V	74_Y	0.529	1.00
294_Y	349_M	0.527	1.00
16_G	21_E	0.527	1.00
60_I	65_V	0.527	1.00
176_Q	179_L	0.526	1.00
43_G	199_C	0.526	1.00
225_H	361_I	0.525	1.00
382_L	403_K	0.524	1.00
105_S	108_G	0.524	1.00
180_G	242_E	0.522	1.00
59_L	77_L	0.522	1.00
340_V	344_I	0.522	1.00
322_P	369_A	0.522	1.00
330_M	357_P	0.521	1.00
325_S	355_I	0.520	1.00
346_S	401_M	0.520	1.00
88_L	251_A	0.520	1.00
143_S	156_N	0.519	0.99
305_G	308_K	0.518	0.99
8_G	254_Y	0.518	0.99
342_E	346_S	0.518	0.99
13_S	334_S	0.515	0.99
88_L	241_E	0.515	0.99
58_G	84_A	0.514	0.99
387_S	399_L	0.514	0.99
155_V	176_Q	0.513	0.99
291_P	383_T	0.513	0.99
223_D	360_N	0.512	0.99
342_E	389_S	0.512	0.99
289_D	320_K	0.511	0.99
285_M	316_V	0.510	0.99
88_L	92_A	0.509	0.99
72_S	145_C	0.508	0.99
74_Y	192_E	0.508	0.99
64_V	149_P	0.507	0.99
222_Y	299_G	0.506	0.99
338_A	389_S	0.506	0.99
90_P	94_Q	0.506	0.99
48_V	51_N	0.506	0.99
246_A	251_A	0.505	0.99
106_G	139_A	0.504	0.99
13_S	22_V	0.504	0.99
93_Y	96_N	0.503	0.99
187_A	237_M	0.503	0.99
126_L	129_V	0.502	0.99
11_I	341_Q	0.502	0.99
13_S	16_G	0.501	0.99
344_I	348_L	0.501	0.99
268_D	273_S	0.500	0.99
15_I	30_R	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2vz8A	2	0.9507	100	0.08	Contact Map
3mqdA	2	0.9926	100	0.151	Contact Map
4na1A	2	0.9631	100	0.151	Contact Map
4qyrA	2	0.9606	100	0.164	Contact Map
4oqjA	2	0.9729	100	0.172	Contact Map
4tktA	1	0.9631	100	0.172	Contact Map
2vbaA	2	1	100	0.173	Contact Map
2hg4A	2	0.9631	100	0.175	Contact Map
4wkyA	2	0.9729	100	0.176	Contact Map
4mz0A	2	0.9606	100	0.176	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0121 seconds.